View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10273_high_19 (Length: 389)

Name: NF10273_high_19
Description: NF10273
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10273_high_19
NF10273_high_19
[»] chr3 (39 HSPs)
chr3 (1-389)||(40880913-40881301)
chr3 (252-389)||(40904373-40904512)
chr3 (251-389)||(40899806-40899946)
chr3 (1-105)||(37273135-37273239)
chr3 (3-114)||(2175816-2175926)
chr3 (3-114)||(36646349-36646460)
chr3 (19-114)||(41724203-41724299)
chr3 (1-114)||(43115048-43115161)
chr3 (20-96)||(2152162-2152238)
chr3 (1-41)||(25182952-25182992)
chr3 (1-65)||(34707461-34707525)
chr3 (1-100)||(1809983-1810082)
chr3 (7-110)||(24281044-24281146)
chr3 (15-113)||(39602189-39602287)
chr3 (1-114)||(14548686-14548799)
chr3 (1-42)||(21574554-21574595)
chr3 (15-99)||(1217779-1217863)
chr3 (15-73)||(3015822-3015880)
chr3 (1-99)||(30923864-30923961)
chr3 (1-57)||(11039304-11039360)
chr3 (18-114)||(22214641-22214737)
chr3 (2-114)||(29113454-29113566)
chr3 (14-114)||(38462273-38462372)
chr3 (5-111)||(2719463-2719570)
chr3 (6-57)||(42817192-42817243)
chr3 (3-78)||(47132022-47132097)
chr3 (4-42)||(2606278-2606316)
chr3 (11-97)||(34414759-34414845)
chr3 (1-67)||(36200135-36200201)
chr3 (9-99)||(41452530-41452620)
chr3 (1-57)||(30750049-30750103)
chr3 (1-42)||(50015950-50015991)
chr3 (3-36)||(50211805-50211838)
chr3 (2-42)||(1395703-1395743)
chr3 (1-41)||(20170918-20170958)
chr3 (1-41)||(20194998-20195038)
chr3 (3-99)||(24624217-24624313)
chr3 (15-67)||(27290880-27290932)
chr3 (75-111)||(48323816-48323852)
[»] chr4 (36 HSPs)
chr4 (1-114)||(2996565-2996678)
chr4 (1-67)||(27123317-27123383)
chr4 (7-114)||(45128281-45128388)
chr4 (3-114)||(53315318-53315429)
chr4 (1-59)||(6428065-6428123)
chr4 (1-106)||(11264301-11264406)
chr4 (1-114)||(23819081-23819194)
chr4 (1-114)||(30207536-30207649)
chr4 (9-120)||(33534142-33534253)
chr4 (1-67)||(1965980-1966045)
chr4 (1-38)||(4071946-4071983)
chr4 (1-38)||(18628518-18628555)
chr4 (4-113)||(28300267-28300376)
chr4 (1-114)||(44319941-44320054)
chr4 (5-114)||(49219131-49219240)
chr4 (1-73)||(4691881-4691953)
chr4 (5-114)||(10192276-10192388)
chr4 (1-57)||(25583641-25583697)
chr4 (5-41)||(31642258-31642294)
chr4 (5-96)||(1137722-1137813)
chr4 (3-42)||(52419585-52419624)
chr4 (1-112)||(55870307-55870417)
chr4 (1-67)||(6987706-6987772)
chr4 (47-113)||(16494816-16494882)
chr4 (4-42)||(27725278-27725316)
chr4 (1-106)||(46415756-46415862)
chr4 (3-105)||(50742803-50742905)
chr4 (1-42)||(7368019-7368060)
chr4 (11-40)||(21683504-21683533)
chr4 (15-92)||(28614787-28614864)
chr4 (19-108)||(46110201-46110290)
chr4 (9-38)||(52428733-52428762)
chr4 (1-41)||(2236945-2236985)
chr4 (1-57)||(2841675-2841731)
chr4 (1-37)||(25904187-25904223)
chr4 (1-57)||(46090779-46090835)
[»] chr2 (52 HSPs)
chr2 (14-134)||(9556209-9556331)
chr2 (5-114)||(30552612-30552722)
chr2 (17-114)||(10285852-10285949)
chr2 (1-106)||(27699494-27699599)
chr2 (6-111)||(28933819-28933923)
chr2 (3-109)||(32821806-32821912)
chr2 (6-103)||(15120186-15120283)
chr2 (1-114)||(22681150-22681263)
chr2 (5-68)||(1494415-1494478)
chr2 (26-121)||(43141856-43141951)
chr2 (5-67)||(13220472-13220534)
chr2 (14-100)||(43065428-43065514)
chr2 (4-102)||(44606078-44606176)
chr2 (1-42)||(1318300-1318341)
chr2 (1-114)||(6993689-6993802)
chr2 (1-106)||(10567057-10567162)
chr2 (1-111)||(33942145-33942257)
chr2 (61-113)||(1899934-1899986)
chr2 (15-67)||(9878661-9878713)
chr2 (1-113)||(14316110-14316222)
chr2 (1-37)||(27317449-27317485)
chr2 (1-97)||(34652001-34652097)
chr2 (14-106)||(35810771-35810863)
chr2 (2-73)||(11063521-11063592)
chr2 (1-96)||(33192212-33192306)
chr2 (5-40)||(39622017-39622052)
chr2 (3-42)||(43808622-43808661)
chr2 (4-42)||(4550811-4550849)
chr2 (59-113)||(9477945-9477999)
chr2 (1-111)||(12313138-12313248)
chr2 (3-65)||(13234547-13234609)
chr2 (1-103)||(32106764-32106866)
chr2 (19-113)||(33941902-33941996)
chr2 (1-42)||(1741997-1742038)
chr2 (6-99)||(1939302-1939395)
chr2 (1-42)||(7862824-7862865)
chr2 (9-114)||(8017426-8017531)
chr2 (4-57)||(9478348-9478401)
chr2 (8-41)||(12140597-12140630)
chr2 (1-42)||(13866942-13866983)
chr2 (1-42)||(28803495-28803536)
chr2 (14-99)||(35378994-35379079)
chr2 (5-57)||(787381-787433)
chr2 (3-39)||(3973609-3973645)
chr2 (2-42)||(4350754-4350794)
chr2 (1-73)||(9996771-9996843)
chr2 (23-67)||(14451037-14451081)
chr2 (1-41)||(16451184-16451224)
chr2 (14-78)||(31096329-31096393)
chr2 (1-57)||(37474814-37474870)
chr2 (81-113)||(43199407-43199439)
chr2 (3-67)||(43456674-43456738)
[»] chr7 (49 HSPs)
chr7 (1-114)||(46082026-46082141)
chr7 (1-114)||(34754775-34754887)
chr7 (1-121)||(48157085-48157205)
chr7 (1-123)||(25670551-25670673)
chr7 (10-68)||(30496743-30496801)
chr7 (1-67)||(33894666-33894732)
chr7 (1-114)||(38010706-38010819)
chr7 (9-121)||(44151449-44151565)
chr7 (2-73)||(28727729-28727800)
chr7 (12-111)||(33645937-33646035)
chr7 (19-113)||(3610723-3610817)
chr7 (1-99)||(12242251-12242349)
chr7 (1-67)||(27626088-27626154)
chr7 (19-104)||(34035919-34036005)
chr7 (1-42)||(22387861-22387902)
chr7 (52-113)||(39907796-39907857)
chr7 (14-111)||(44615082-44615179)
chr7 (8-97)||(47427275-47427364)
chr7 (1-97)||(3468623-3468719)
chr7 (5-97)||(5276240-5276332)
chr7 (1-41)||(23214920-23214960)
chr7 (1-57)||(36537957-36538013)
chr7 (7-66)||(6857310-6857369)
chr7 (1-112)||(28691801-28691911)
chr7 (2-113)||(30535556-30535667)
chr7 (2-113)||(39542266-39542377)
chr7 (83-114)||(39711453-39711484)
chr7 (19-109)||(9038109-9038198)
chr7 (19-73)||(15740394-15740448)
chr7 (76-114)||(21453286-21453324)
chr7 (36-106)||(24363601-24363671)
chr7 (1-67)||(36598321-36598387)
chr7 (1-67)||(39360062-39360128)
chr7 (3-73)||(44808191-44808261)
chr7 (47-113)||(44821952-44822018)
chr7 (62-100)||(47046134-47046172)
chr7 (12-81)||(17983769-17983838)
chr7 (61-110)||(20881661-20881710)
chr7 (1-42)||(25422390-25422431)
chr7 (1-42)||(28340386-28340426)
chr7 (1-42)||(31003004-31003045)
chr7 (4-36)||(3804405-3804437)
chr7 (1-37)||(4970756-4970792)
chr7 (7-99)||(7244687-7244779)
chr7 (1-121)||(28165076-28165196)
chr7 (5-57)||(28844539-28844591)
chr7 (9-41)||(31149705-31149737)
chr7 (9-41)||(31167997-31168029)
chr7 (14-109)||(39967917-39968013)
[»] chr6 (46 HSPs)
chr6 (1-67)||(2460116-2460182)
chr6 (15-114)||(4006706-4006805)
chr6 (7-93)||(34939526-34939612)
chr6 (1-114)||(281813-281926)
chr6 (2-114)||(8035114-8035226)
chr6 (5-57)||(8348275-8348327)
chr6 (9-73)||(10616514-10616578)
chr6 (14-114)||(30523652-30523751)
chr6 (19-111)||(31624085-31624177)
chr6 (7-67)||(32577957-32578017)
chr6 (1-57)||(33500445-33500501)
chr6 (6-73)||(9027611-9027678)
chr6 (3-106)||(20368147-20368250)
chr6 (1-111)||(10476087-10476196)
chr6 (2-40)||(32171349-32171387)
chr6 (9-114)||(4246402-4246507)
chr6 (15-100)||(7931705-7931790)
chr6 (1-42)||(32917261-32917302)
chr6 (12-48)||(725631-725667)
chr6 (26-114)||(2112192-2112280)
chr6 (5-41)||(27857423-27857459)
chr6 (1-81)||(33832238-33832318)
chr6 (1-36)||(7485102-7485137)
chr6 (14-57)||(20377898-20377941)
chr6 (19-73)||(1575928-1575982)
chr6 (76-114)||(2727896-2727934)
chr6 (9-67)||(4080955-4081013)
chr6 (5-99)||(4324423-4324516)
chr6 (9-67)||(5566150-5566208)
chr6 (1-67)||(10031771-10031837)
chr6 (15-57)||(30863295-30863337)
chr6 (15-115)||(781371-781472)
chr6 (5-42)||(2263256-2263293)
chr6 (25-98)||(3528811-3528884)
chr6 (76-113)||(20671905-20671942)
chr6 (9-42)||(31338040-31338073)
chr6 (8-57)||(31594356-31594405)
chr6 (49-114)||(31671087-31671152)
chr6 (1-42)||(33116648-33116689)
chr6 (1-42)||(33498683-33498724)
chr6 (14-42)||(1669776-1669804)
chr6 (2-42)||(2027764-2027804)
chr6 (1-57)||(5731618-5731674)
chr6 (14-42)||(6310228-6310256)
chr6 (1-41)||(9559503-9559543)
chr6 (7-67)||(30604935-30604995)
[»] chr1 (58 HSPs)
chr1 (1-160)||(7218039-7218199)
chr1 (6-114)||(25005765-25005875)
chr1 (4-114)||(38867799-38867909)
chr1 (1-114)||(25479573-25479686)
chr1 (15-114)||(17420195-17420294)
chr1 (32-119)||(27887114-27887201)
chr1 (1-67)||(4868439-4868504)
chr1 (15-106)||(11639395-11639486)
chr1 (6-68)||(4548759-4548821)
chr1 (19-97)||(4699598-4699676)
chr1 (9-67)||(6262777-6262835)
chr1 (20-114)||(29045896-29045990)
chr1 (1-95)||(32515406-32515500)
chr1 (47-109)||(35351036-35351098)
chr1 (9-114)||(3224415-3224520)
chr1 (3-40)||(5591933-5591970)
chr1 (1-114)||(31517705-31517818)
chr1 (5-106)||(33185927-33186027)
chr1 (19-112)||(37842338-37842431)
chr1 (4-57)||(42336664-42336717)
chr1 (61-113)||(1432508-1432560)
chr1 (49-113)||(4700079-4700143)
chr1 (6-42)||(8780394-8780430)
chr1 (3-55)||(15579533-15579585)
chr1 (5-114)||(28689421-28689532)
chr1 (33-121)||(30257668-30257756)
chr1 (19-67)||(33108605-33108653)
chr1 (33-113)||(36151502-36151582)
chr1 (1-57)||(38170655-38170711)
chr1 (14-114)||(39270403-39270503)
chr1 (5-68)||(4481968-4482031)
chr1 (6-113)||(6279392-6279499)
chr1 (8-99)||(10744308-10744399)
chr1 (1-112)||(11695855-11695966)
chr1 (1-115)||(35668963-35669075)
chr1 (1-36)||(43371856-43371891)
chr1 (37-99)||(2522636-2522698)
chr1 (1-39)||(4033982-4034020)
chr1 (1-110)||(4549506-4549616)
chr1 (1-107)||(26779891-26779996)
chr1 (10-52)||(45234247-45234289)
chr1 (1-114)||(17269242-17269355)
chr1 (61-114)||(26946472-26946525)
chr1 (7-100)||(27963341-27963434)
chr1 (1-42)||(34536222-34536263)
chr1 (6-55)||(37941955-37942004)
chr1 (16-73)||(43722308-43722365)
chr1 (1-114)||(44422691-44422804)
chr1 (1-42)||(49521770-49521811)
chr1 (1-42)||(49692017-49692058)
chr1 (2-42)||(7356504-7356544)
chr1 (47-99)||(15558224-15558276)
chr1 (1-41)||(16980868-16980908)
chr1 (7-67)||(24153320-24153380)
chr1 (5-57)||(29929590-29929642)
chr1 (81-121)||(34179917-34179957)
chr1 (1-57)||(38001645-38001701)
chr1 (61-113)||(49888760-49888812)
[»] chr8 (34 HSPs)
chr8 (5-114)||(30389091-30389200)
chr8 (5-110)||(39551178-39551283)
chr8 (1-73)||(8629489-8629561)
chr8 (1-97)||(14949875-14949971)
chr8 (1-99)||(11569422-11569520)
chr8 (14-100)||(26473730-26473816)
chr8 (2-107)||(779027-779132)
chr8 (1-121)||(2091746-2091868)
chr8 (1-41)||(30918177-30918217)
chr8 (2-100)||(7918412-7918510)
chr8 (7-97)||(9540967-9541057)
chr8 (3-73)||(11770978-11771048)
chr8 (1-42)||(30987956-30987997)
chr8 (1-114)||(40071741-40071854)
chr8 (6-114)||(6509273-6509381)
chr8 (1-57)||(9572919-9572975)
chr8 (1-73)||(9700034-9700106)
chr8 (3-111)||(12851171-12851279)
chr8 (5-73)||(31875564-31875632)
chr8 (1-36)||(7918746-7918781)
chr8 (3-42)||(30191108-30191147)
chr8 (2-41)||(32840951-32840990)
chr8 (1-67)||(6950361-6950427)
chr8 (5-99)||(8060676-8060770)
chr8 (3-113)||(31862486-31862595)
chr8 (1-42)||(2487973-2488014)
chr8 (1-42)||(4251020-4251061)
chr8 (4-41)||(10120822-10120859)
chr8 (4-57)||(26371014-26371067)
chr8 (9-38)||(27412855-27412884)
chr8 (15-104)||(35220702-35220791)
chr8 (1-42)||(41442418-41442459)
chr8 (1-37)||(11056631-11056667)
chr8 (14-42)||(45071438-45071466)
[»] chr5 (38 HSPs)
chr5 (4-113)||(10272399-10272508)
chr5 (5-121)||(4619692-4619808)
chr5 (15-99)||(41957430-41957514)
chr5 (1-103)||(37611180-37611282)
chr5 (1-103)||(37787910-37788012)
chr5 (12-73)||(13604825-13604886)
chr5 (1-114)||(14295498-14295611)
chr5 (1-114)||(37526164-37526277)
chr5 (1-114)||(37588325-37588438)
chr5 (17-113)||(37794679-37794774)
chr5 (7-113)||(15246826-15246933)
chr5 (14-57)||(29363057-29363100)
chr5 (9-103)||(12242683-12242777)
chr5 (1-114)||(37690601-37690715)
chr5 (3-181)||(35960338-35960516)
chr5 (1-113)||(7674641-7674753)
chr5 (2-38)||(8090004-8090040)
chr5 (1-114)||(10391333-10391447)
chr5 (26-114)||(15003504-15003592)
chr5 (2-113)||(2568651-2568762)
chr5 (47-114)||(7319398-7319465)
chr5 (1-52)||(10152388-10152439)
chr5 (12-107)||(17368675-17368770)
chr5 (47-113)||(12425564-12425630)
chr5 (2-56)||(14980559-14980613)
chr5 (5-87)||(28586735-28586817)
chr5 (1-67)||(29590594-29590660)
chr5 (4-42)||(38047847-38047885)
chr5 (16-57)||(5531083-5531124)
chr5 (1-42)||(10907442-10907483)
chr5 (1-42)||(12459966-12460007)
chr5 (14-67)||(30269711-30269764)
chr5 (9-73)||(2092518-2092582)
chr5 (14-110)||(15402807-15402903)
chr5 (14-114)||(19369305-19369405)
chr5 (12-68)||(21768173-21768229)
chr5 (1-37)||(29336699-29336735)
chr5 (10-114)||(36542256-36542360)
[»] scaffold0311 (1 HSPs)
scaffold0311 (1-67)||(10582-10648)
[»] scaffold0608 (1 HSPs)
scaffold0608 (5-68)||(9606-9669)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-100)||(306332-306431)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1-67)||(27615-27681)
[»] scaffold0459 (1 HSPs)
scaffold0459 (1-41)||(6611-6651)
[»] scaffold0366 (1 HSPs)
scaffold0366 (1-41)||(6609-6649)


Alignment Details
Target: chr3 (Bit Score: 381; Significance: 0; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 381; E-Value: 0
Query Start/End: Original strand, 1 - 389
Target Start/End: Original strand, 40880913 - 40881301
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40880913 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 40881012  T
Q  101 tttatagcttatattgaaacactgactttatttttatatttcattatggaaatagcttatgagtaagtacttaaatgataagggcttatattgtaaactc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40881013 tttatagcttatattgaaacactgactttatttttatatttcattatggaaatagcttatgagtaagtacttaaatgataagggcttatattgtaaactc 40881112  T
Q  201 ttattaattaagctgtttatccaagtagtgtataatatatgcttgcattgagatattaatatataactaggttgagtatatgatttcctaattcaatttg 300  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40881113 ttattaattaagctgtttatccaagtagtgtataatatatccttgcattgagatattaatatataactaggttgagtatatgatttcctaattcaatttg 40881212  T
Q  301 cattcatggtcgtaggtcttggtgctaccatcaatgttgctaaaccgaaacccggttcttctgttgctatctttggacttggagctgtt 389  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40881213 cattcatggtcttaggtcttggtgctaccatcaatgttgctaaaccgaaacccggttcttctgttgctatctttggacttggagctgtt 40881301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 252 - 389
Target Start/End: Original strand, 40904373 - 40904512
Alignment:
Q  252 gatattaatatataactaggttgagtatatgatttcctaattcaatttgcattcatggtcgta--ggtcttggtgctaccatcaatgttgctaaaccgaa 349  Q
    |||||||| ||||||||||| ||||| |||| |||| ||||||||||||| | |||  |  ||  |||||||||||||| ||||||||||||||||| ||    
T  40904373 gatattaacatataactaggatgagtctatgttttcgtaattcaatttgcttccatacttctataggtcttggtgctactatcaatgttgctaaaccaaa 40904472  T
Q  350 acccggttcttctgttgctatctttggacttggagctgtt 389  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  40904473 acccggttcttctgtcgctatctttggacttggagctgtt 40904512  T

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Target: chr3; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 251 - 389
Target Start/End: Original strand, 40899806 - 40899946
Alignment:
Q  251 agatattaatatataactaggttgagtatatgatttcctaattcaatttgcattcatggtcgta--ggtcttggtgctaccatcaatgttgctaaaccga 348  Q
    ||||||| |||||||| |||| ||||| |||| ||  |||||||||||||| | |||| |  ||  |||||||||||||| |||||||| |||||||| |    
T  40899806 agatatttatatataattaggctgagtctatgtttctctaattcaatttgcttccatgcttttacaggtcttggtgctactatcaatgtagctaaaccaa 40899905  T
Q  349 aacccggttcttctgttgctatctttggacttggagctgtt 389  Q
    |||||||||| ||||||||||||||||| ||||||||||||    
T  40899906 aacccggttcatctgttgctatctttggccttggagctgtt 40899946  T

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Target: chr3; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 37273239 - 37273135
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 100  Q
    |||||||||||| ||||||||||| ||||||||||||||||| || ||||||||||| |||||||||  |||| ||||| | ||||| |||||||||||     
T  37273239 tgagactgtttgggagagcttatggaaacaacttatgacatgtccataagttgttttcaacttatttccataagttctccaagatagcttatgaaaacag 37273140  T
Q  101 tttat 105  Q
    |||||    
T  37273139 tttat 37273135  T

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Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 2175816 - 2175926
Alignment:
Q  3 agactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatt 102  Q
    ||||| ||||||| || |||||||||||||||||||||||   ||||| |||||| ||||| ||| |||||  |||| ||| ||||||||| ||||||||    
T  2175816 agactatttgagatagtttatgaaaacaacttatgacatgtttgtaagctgttttcaacttgtttctataaactctcaagggtagtttatg-aaacaatt 2175914  T
Q  103 tatagcttatat 114  Q
    ||||||||||||    
T  2175915 tatagcttatat 2175926  T

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Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 114
Target Start/End: Original strand, 36646349 - 36646460
Alignment:
Q  3 agactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatt 102  Q
    ||||| |||| ||||||||||| |||| ||||||| |||| || |||| |||||| | ||||||| |||||  |||||||||||| |||||||||||| |    
T  36646349 agactatttgggagagcttatggaaaccacttatggcatgtccataagctgttttcatcttatttctataaactctctaggatagcttatgaaaacaagt 36646448  T
Q  103 tatagcttatat 114  Q
    |||| |||||||    
T  36646449 tataacttatat 36646460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 114
Target Start/End: Complemental strand, 41724299 - 41724203
Alignment:
Q  19 cttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttt-tataacttctctaggatagtttatgaaaacaatttatagcttatat 114  Q
    |||||| ||||||||||||||||| || ||||||||||| | |||||||| |||||  |||| ||||||| | ||||||||| ||||||||||||||    
T  41724299 cttatggaaacaacttatgacatgtccataagttgttttcagcttattttatataagctctcaaggatagctgatgaaaacagtttatagcttatat 41724203  T

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Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 43115161 - 43115048
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 100  Q
    ||||| ||||||  |||| ||||| ||||||||||||||||| || ||| ||||||| | |||||||  ||||  |||| | ||||||| ||||||||||    
T  43115161 tgagattgtttggaagagtttatggaaacaacttatgacatgtccataacttgttttcagcttatttccataagctctcaatgatagttcatgaaaacaa 43115062  T
Q  101 tttatagcttatat 114  Q
     |||||||||||||    
T  43115061 cttatagcttatat 43115048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 2152162 - 2152238
Alignment:
Q  20 ttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaa 96  Q
    |||||||||||||||||||||||  |||||| |||||| ||||| ||| |||||  |||| ||||||||||||||||    
T  2152162 ttatgaaaacaacttatgacatgttcgtaagctgttttcaacttgtttctataagctctcaaggatagtttatgaaa 2152238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 25182952 - 25182992
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacat 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  25182952 tgagactgtttgagagagcttatgaaaacaacttatgacat 25182992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 34707461 - 34707525
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttat 65  Q
    ||||||||||||||||| ||| |||||||||||| ||||||| || ||||||||||| |||||||    
T  34707461 tgagactgtttgagagaacttttgaaaacaacttgtgacatgtccataagttgttttcaacttat 34707525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 1810082 - 1809983
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 100  Q
    ||||||| |||||||||||||| | ||||||||||||||||| || | |||||||||   ||||||| ||||| ||   |||||||| ||||||||||||    
T  1810082 tgagactatttgagagagcttacggaaacaacttatgacatgtccatgagttgttttctgcttatttctataagtttcgtaggatagcttatgaaaacaa 1809983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 110
Target Start/End: Complemental strand, 24281146 - 24281044
Alignment:
Q  7 tgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttata 106  Q
    |||||||||||||||||||||||||||||||| ||  || ||||||||||| |||||| ||| ||||  |||| | |||||  ||||| |||| ||||||    
T  24281146 tgtttgagagagcttatgaaaacaacttatgatatctccataagttgttttcaacttactttcataagctctccatgatag-ctatgacaacagtttata 24281048  T
Q  107 gctt 110  Q
    ||||    
T  24281047 gctt 24281044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 113
Target Start/End: Original strand, 39602189 - 39602287
Alignment:
Q  15 agagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttata 113  Q
    |||||||||||| ||| |||||||||||  | ||| ||||||| |||||||||| |||| ||||| | ||||| |||||||||||  ||||| ||||||    
T  39602189 agagcttatgaagacagcttatgacatgttcataaattgttttcaacttattttcataagttctcaaagatagcttatgaaaacagcttataacttata 39602287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 14548686 - 14548799
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 100  Q
    |||||||||||||||||||||||||||||||| ||||||||     || | |||||| | |||||||  ||||  |||| || |||  ||||||||||||    
T  14548686 tgagactgtttgagagagcttatgaaaacaacgtatgacattttaataggctgttttcagcttatttccataagctctccagaataacttatgaaaacaa 14548785  T
Q  101 tttatagcttatat 114  Q
     |||||||||||||    
T  14548786 cttatagcttatat 14548799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 21574595 - 21574554
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatg 42  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  21574595 tgagactgtttgggagagcttatgaaaacaacttatgacatg 21574554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 1217779 - 1217863
Alignment:
Q  15 agagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 99  Q
    |||||||| | ||||| ||||||||||| || ||||||||||| | |||| ||| |||| ||||| ||||||| |||||||||||    
T  1217779 agagcttacggaaacagcttatgacatgtccataagttgttttcatcttactttcataagttctcaaggatagcttatgaaaaca 1217863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 3015822 - 3015880
Alignment:
Q  15 agagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataa 73  Q
    |||||||||||||||||||||||||||| || |||| |||||| | |||||||| ||||    
T  3015822 agagcttatgaaaacaacttatgacatgtccataagatgttttcatcttattttaataa 3015880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 30923864 - 30923961
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 99  Q
    |||||||||||  ||||||| ||| ||||| ||||||||||| |  |||| |||||| | ||||||| |||||  |||||||||||| |||||||||||    
T  30923864 tgagactgtttatgagagct-atggaaacagcttatgacatgtctataagctgttttcagcttatttctataaactctctaggataggttatgaaaaca 30923961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 11039304 - 11039360
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtttt 57  Q
    ||||||||||||| |||||||||| |||||  |||||||||| || |||||||||||    
T  11039304 tgagactgtttgaaagagcttatggaaacatattatgacatgtccataagttgtttt 11039360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 22214641 - 22214737
Alignment:
Q  18 gcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttatat 114  Q
    ||||||||||| ||| | ||||||| || |||| |||||| | |||||||   |||  |||||||||||| |||||||||||| |||||| ||||||    
T  22214641 gcttatgaaaaaaacatttgacatgtccataagctgttttcagcttatttccgtaatgtctctaggatagcttatgaaaacaacttataggttatat 22214737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 29113566 - 29113454
Alignment:
Q  2 gagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaat 101  Q
    |||||||||||||||||||||   ||||||||||| ||||| |  |||| | |||| |  ||||||| ||||  | ||||||| || ||||||| | |||    
T  29113566 gagactgtttgagagagcttacagaaacaacttataacatgcctataagctattttcattttattttcataagctttctaggacagcttatgaacaaaat 29113467  T
Q  102 ttatagcttatat 114  Q
    |||||||||||||    
T  29113466 ttatagcttatat 29113454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 114
Target Start/End: Complemental strand, 38462372 - 38462273
Alignment:
Q  14 gagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttata 113  Q
    ||||||||||  |||||| ||||||| ||||| ||||||||||| | |||||||  ||||  | ||| |||||| ||||||||||| |||||||| ||||    
T  38462372 gagagcttatacaaacaa-ttatgacttgaccataagttgttttcagcttatttccataagctatcttggatagcttatgaaaacagtttatagcatata 38462274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 111
Target Start/End: Complemental strand, 2719570 - 2719463
Alignment:
Q  5 actgtttgagagagcttatgaaaacaacttatgacat-gaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaattt 103  Q
    ||||||||||||| |||| ||||||||||||    || | || ||||||||| | | |||||||| |||| ||||| | ||||| ||||||||||| |||    
T  2719570 actgtttgagagaacttaggaaaacaacttaaactattgtccataagttgttctcagcttattttcataagttctccaagatagcttatgaaaacagttt 2719471  T
Q  104 atagctta 111  Q
    ||||||||    
T  2719470 atagctta 2719463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 42817192 - 42817243
Alignment:
Q  6 ctgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtttt 57  Q
    ||||||||||||||||||| ||||| | ||||||||| || |||||||||||    
T  42817192 ctgtttgagagagcttatggaaacagcatatgacatgtccataagttgtttt 42817243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 47132097 - 47132022
Alignment:
Q  3 agactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttct 78  Q
    ||||| ||||||||| ||||||||||||||||||| |||  || |||  |||||| | ||||||||||||| ||||    
T  47132097 agactatttgagagaacttatgaaaacaacttatgtcatatccataaactgttttcagcttatttttataagttct 47132022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 2606278 - 2606316
Alignment:
Q  4 gactgtttgagagagcttatgaaaacaacttatgacatg 42  Q
    |||||||||||||| |||||| |||||||||||||||||    
T  2606278 gactgtttgagagatcttatggaaacaacttatgacatg 2606316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 34414759 - 34414845
Alignment:
Q  11 tgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaa 97  Q
    |||| ||||||||||||||||  |||| ||||  | ||||||||||| | |||||||| ||||  |||| | |||||||||||||||    
T  34414759 tgagtgagcttatgaaaacaatctatgtcatgcgcataagttgttttcagcttattttcataaactctccatgatagtttatgaaaa 34414845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 36200201 - 36200135
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttattt 67  Q
    ||||| |||| ||||||| || || ||||||||||||||||| || ||||||||||| | |||||||    
T  36200201 tgagaatgttggagagagtttttgtaaacaacttatgacatgtccataagttgttttcagcttattt 36200135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 41452620 - 41452530
Alignment:
Q  9 tttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 99  Q
    ||||||||| |||||  ||||||||||||| ||| |  |||| |||||| | |||||||  | |||||||| ||||||| |||||||||||    
T  41452620 tttgagagaccttatagaaacaacttatgatatgtctataagctgttttcaccttatttccacaacttctccaggatagcttatgaaaaca 41452530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 30750103 - 30750049
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtttt 57  Q
    ||||||| |||||||||||  ||||||||||||||||||||| || |||| ||||||    
T  30750103 tgagactatttgagagagc--atgaaaacaacttatgacatgtccataagctgtttt 30750049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 50015991 - 50015950
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatg 42  Q
    ||||||||||||||||| |||||||||| ||| |||||||||    
T  50015991 tgagactgtttgagagaacttatgaaaagaacgtatgacatg 50015950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 36
Target Start/End: Complemental strand, 50211838 - 50211805
Alignment:
Q  3 agactgtttgagagagcttatgaaaacaacttat 36  Q
    ||||||||||||||| ||||||||||||||||||    
T  50211838 agactgtttgagagaacttatgaaaacaacttat 50211805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 1395743 - 1395703
Alignment:
Q  2 gagactgtttgagagagcttatgaaaacaacttatgacatg 42  Q
    |||||||||||||||||||||  ||||||||||| ||||||    
T  1395743 gagactgtttgagagagcttacaaaaacaacttaagacatg 1395703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 20170958 - 20170918
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacat 41  Q
    ||||||||||||  ||||||||| |||||||||||||||||    
T  20170958 tgagactgtttgtaagagcttataaaaacaacttatgacat 20170918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 20194998 - 20195038
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacat 41  Q
    |||||||||||| |||||||||||||||||  |||||||||    
T  20194998 tgagactgtttgtgagagcttatgaaaacagtttatgacat 20195038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 24624313 - 24624217
Alignment:
Q  3 agactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 99  Q
    ||||||||||  |||||||||||||||| ||||||||||| || |||  |||||| | ||||||   ||||  | ||||||||||  ||||||||||    
T  24624313 agactgtttggaagagcttatgaaaacagcttatgacatgtccataaactgttttcagcttattaacataagatttctaggatagcctatgaaaaca 24624217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 27290880 - 27290932
Alignment:
Q  15 agagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttattt 67  Q
    |||||||||||||||| ||||||||||| || |||| |||||| | |||||||    
T  27290880 agagcttatgaaaacagcttatgacatgcccataagctgttttcagcttattt 27290932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 111
Target Start/End: Complemental strand, 48323852 - 48323816
Alignment:
Q  75 ttctctaggatagtttatgaaaacaatttatagctta 111  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  48323852 ttctctatgataatttatgaaaacaatttatagctta 48323816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 3e-24; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 2996678 - 2996565
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||| | |||| |||||||||| |||   |||| | ||||| ||||||||||||    
T  2996678 tgagactgtttgagagagcttatgaaaacaacttatgacatgtccataagcttttttcaacttattttcatacgctctccaagatagcttatgaaaacaa 2996579  T
Q  101 tttatagcttatat 114  Q
     ||||| |||||||    
T  2996578 cttataacttatat 2996565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 27123317 - 27123383
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttattt 67  Q
    |||||||||||||||||||||||| ||||||||||||||||| |  ||||||||||| |||||||||    
T  27123317 tgagactgtttgagagagcttatggaaacaacttatgacatgtctttaagttgttttcaacttattt 27123383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 7 - 114
Target Start/End: Original strand, 45128281 - 45128388
Alignment:
Q  7 tgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttata 106  Q
    |||||||||||||||||| |||||||| ||  |||| || | || |||||| | |||||||  ||||  | | ||||| |||||||||||||||||||||    
T  45128281 tgtttgagagagcttatggaaacaactgatatcatgtccatgagctgttttcagcttatttccataagctttataggacagtttatgaaaacaatttata 45128380  T
Q  107 gcttatat 114  Q
    ||||||||    
T  45128381 gcttatat 45128388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 114
Target Start/End: Complemental strand, 53315429 - 53315318
Alignment:
Q  3 agactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatt 102  Q
    ||||| |||| ||||||||||||||||||| ||| ||||| || |||| | |||| |||||||||| ||||  |||||||| | |||| ||| ||||  |    
T  53315429 agactatttgtgagagcttatgaaaacaacatatcacatgtccataagctatttttaacttattttcataagctctctaggtttgtttttgagaacagct 53315330  T
Q  103 tatagcttatat 114  Q
    ||||||||||||    
T  53315329 tatagcttatat 53315318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 6428123 - 6428065
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaa 59  Q
    |||||| ||||||||||| ||||||||||||||||||||||| || ||||||| |||||    
T  6428123 tgagacagtttgagagagattatgaaaacaacttatgacatgtccataagttgatttaa 6428065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 11264406 - 11264301
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 100  Q
    |||||||||||| |||||| |||  || |||||||||||||| || |||  |||||| |||||||||  ||||  |||||||||| | ||||||||||||    
T  11264406 tgagactgtttgggagagcatatagaatcaacttatgacatgtccataaactgttttcaacttatttccataagctctctaggatggcttatgaaaacaa 11264307  T
Q  101 tttata 106  Q
     |||||    
T  11264306 cttata 11264301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 23819194 - 23819081
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 100  Q
    ||||||||||||  |||| ||| ||||||| ||||||||||| || ||||||||||| | ||||||| |||||  |||  | ||||| |||||||||||     
T  23819194 tgagactgtttggaagagtttaagaaaacagcttatgacatgtccataagttgttttcatcttatttctataagctcttcaagatagcttatgaaaacat 23819095  T
Q  101 tttatagcttatat 114  Q
     ||||| |||||||    
T  23819094 gttataacttatat 23819081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 30207536 - 30207649
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 100  Q
    |||||||| | |||||||||||| | |||| | ||||||||| | ||||| |||||| | |||||||  ||||  |||||| | ||| ||||||||||||    
T  30207536 tgagactgatcgagagagcttataagaacagcatatgacatgtctgtaagctgttttcagcttatttccataatctctctaaggtagcttatgaaaacaa 30207635  T
Q  101 tttatagcttatat 114  Q
     |||||||||||||    
T  30207636 cttatagcttatat 30207649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 9 - 120
Target Start/End: Original strand, 33534142 - 33534253
Alignment:
Q  9 tttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagc 108  Q
    ||||||||||||||||||||||| || ||||||  || ||||||||||| | |||||||| ||||  |||| |  ||| |||| |||||||| || |||     
T  33534142 tttgagagagcttatgaaaacaaattgtgacatatccataagttgttttcagcttattttcataagctctcaaaaataatttacgaaaacaacttgtaga 33534241  T
Q  109 ttatattgaaac 120  Q
    |||||| |||||    
T  33534242 ttatatagaaac 33534253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 1966045 - 1965980
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttattt 67  Q
    ||||||||||| || |||||||||||||||||||||||||||  | |||| |||||| |||||||||    
T  1966045 tgagactgttttag-gagcttatgaaaacaacttatgacatgttcataagctgtttttaacttattt 1965980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 4071983 - 4071946
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatga 38  Q
    |||||||||||||||||||||||||||||| |||||||    
T  4071983 tgagactgtttgagagagcttatgaaaacagcttatga 4071946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 18628518 - 18628555
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatga 38  Q
    |||||||||||| |||||||||||||||||||||||||    
T  18628518 tgagactgtttgggagagcttatgaaaacaacttatga 18628555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 28300267 - 28300376
Alignment:
Q  4 gactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaattt 103  Q
    ||||| ||||||||  ||||||||||| | |||||||||  | ||||||||||| |||||||||| ||||  |||  | |||||  |||||||| | |||    
T  28300267 gactgattgagagaatttatgaaaacagcctatgacatgttcttaagttgttttcaacttattttcataagctcttcaagatagcctatgaaaatagttt 28300366  T
Q  104 atagcttata 113  Q
    ||||||||||    
T  28300367 atagcttata 28300376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 44320054 - 44319941
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 100  Q
    |||||||||||| |||||||||||||||||| ||||||  |  || | || | |||| |||| ||||| |||| ||||||||||||| |||| |||| |     
T  44320054 tgagactgtttgggagagcttatgaaaacaaattatgatgtatccattagctattttcaactaattttcataagttctctaggatagcttatcaaaatag 44319955  T
Q  101 tttatagcttatat 114  Q
     || ||||||||||    
T  44319954 cttgtagcttatat 44319941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 49219240 - 49219131
Alignment:
Q  5 actgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaattta 104  Q
    |||||||  |||| ||||||||||||| | ||  |||  || ||||||||||| | |||||||  ||||  ||| || |||||||||||||||||| |||    
T  49219240 actgtttaggagaccttatgaaaacaattaatagcatctccataagttgttttcagcttatttccataatctctttaagatagtttatgaaaacaactta 49219141  T
Q  105 tagcttatat 114  Q
    ||||||||||    
T  49219140 tagcttatat 49219131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 4691953 - 4691881
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataa 73  Q
    ||||||| ||||||| | |||||| ||||||||||||||||| || || |||||||| | |||||||| ||||    
T  4691953 tgagactatttgagaaaacttatggaaacaacttatgacatgcccatatgttgttttcagcttattttcataa 4691881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 10192388 - 10192276
Alignment:
Q  5 actgtttgagagagcttatgaaaacaacttatgacatgac----cgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 100  Q
    ||||||||||||| ||||| |||| ||||||| |||||      ||||||||||||| |||||||||| ||| | |||| ||||||| || |||||||||    
T  10192388 actgtttgagagaacttataaaaataacttataacatgcatgttcgtaagttgttttcaacttattttcatagc-tctccaggatagcttttgaaaacaa 10192290  T
Q  101 tttatagcttatat 114  Q
     ||||| |||||||    
T  10192289 cttataacttatat 10192276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 25583697 - 25583641
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtttt 57  Q
    |||||||||||| ||| ||||||| ||||||||||||||||| ||  ||||||||||    
T  25583697 tgagactgtttgggagcgcttatgcaaacaacttatgacatgtccaaaagttgtttt 25583641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 31642294 - 31642258
Alignment:
Q  5 actgtttgagagagcttatgaaaacaacttatgacat 41  Q
    ||||||||||||| |||||||||||||||||||||||    
T  31642294 actgtttgagagaacttatgaaaacaacttatgacat 31642258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 96
Target Start/End: Complemental strand, 1137813 - 1137722
Alignment:
Q  5 actgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaa 96  Q
    |||||||  |||| |||||||||||| |||||||||||  | ||||||||||| |  ||||||  ||||  ||||| |||||||||||||||    
T  1137813 actgtttaggagaacttatgaaaacatcttatgacatgttcataagttgttttcagtttatttccataagctctcttggatagtttatgaaa 1137722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 52419585 - 52419624
Alignment:
Q  3 agactgtttgagagagcttatgaaaacaacttatgacatg 42  Q
    ||||||||||||||| |||||||||||||||||| |||||    
T  52419585 agactgtttgagagaccttatgaaaacaacttattacatg 52419624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 55870307 - 55870417
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 100  Q
    ||||||| ||||||| |||||||||||| |  ||||||| || || |||| ||||||||| ||| | ||||||  ||||| |  ||| ||||||||||||    
T  55870307 tgagactctttgagatagcttatgaaaaaagtttatgacctgtccataagctgttttaaaatta-tattataagctctcttgattagcttatgaaaacaa 55870405  T
Q  101 tttatagcttat 112  Q
     |||||||||||    
T  55870406 cttatagcttat 55870417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 6987706 - 6987772
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttattt 67  Q
    |||||||||||| ||||||||||| | ||||||||||||||| || |||  | |||| |||||||||    
T  6987706 tgagactgtttgggagagcttatggatacaacttatgacatgtccataaactattttcaacttattt 6987772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 113
Target Start/End: Original strand, 16494816 - 16494882
Alignment:
Q  47 taagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttata 113  Q
    ||||||||||| |||||| ||||| ||  |||| | ||||| |||||||||||| ||||||||||||    
T  16494816 taagttgttttcaacttagttttacaagctctccaagatagcttatgaaaacaacttatagcttata 16494882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 27725316 - 27725278
Alignment:
Q  4 gactgtttgagagagcttatgaaaacaacttatgacatg 42  Q
    ||||||||||||||||||||| ||| |||||||||||||    
T  27725316 gactgtttgagagagcttatggaaataacttatgacatg 27725278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 46415756 - 46415862
Alignment:
Q  1 tgagactgttt-gagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 99  Q
    ||||||||||| | ||||| ||||| ||||||| ||||||||| || ||||||||||| | || |||||  |||  |||| ||||||| ||||||||| |    
T  46415756 tgagactgttttgggagagtttatgcaaacaacctatgacatgtccataagttgttttcagctaattttactaagctctcgaggatagcttatgaaaaga 46415855  T
Q  100 atttata 106  Q
    | |||||    
T  46415856 acttata 46415862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 105
Target Start/End: Original strand, 50742803 - 50742905
Alignment:
Q  3 agactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatt 102  Q
    ||||||||||||||| ||||||||||||  | ||||||||  | ||   |||||| |||| ||||| ||||  |||| ||||||| |||||||||||| |    
T  50742803 agactgtttgagagaacttatgaaaacagttcatgacatgttcataccctgttttcaactcattttcataagctctccaggatagcttatgaaaacaagt 50742902  T
Q  103 tat 105  Q
    |||    
T  50742903 tat 50742905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 7368019 - 7368060
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatg 42  Q
    |||||||||||| ||||||| ||||||||| |||||||||||    
T  7368019 tgagactgtttgggagagctcatgaaaacagcttatgacatg 7368060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 40
Target Start/End: Original strand, 21683504 - 21683533
Alignment:
Q  11 tgagagagcttatgaaaacaacttatgaca 40  Q
    ||||||||||||||||||||||||||||||    
T  21683504 tgagagagcttatgaaaacaacttatgaca 21683533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 92
Target Start/End: Original strand, 28614787 - 28614864
Alignment:
Q  15 agagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttat 92  Q
    |||||||||| |||||| |||||||||  || |||| | |||| | |||||||| |||| ||||||||||||| ||||    
T  28614787 agagcttatggaaacaatttatgacatatccataagctcttttcagcttattttcataagttctctaggatagcttat 28614864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 108
Target Start/End: Complemental strand, 46110290 - 46110201
Alignment:
Q  19 cttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagc 108  Q
    |||||||||||||||||||| ||   | ||||||||||| | ||||||| |||||  |||| |  |||| ||||||||||| ||||||||    
T  46110290 cttatgaaaacaacttatgatatactcataagttgttttcagcttatttctataagctctcaatcatagcttatgaaaacagtttatagc 46110201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 38
Target Start/End: Complemental strand, 52428762 - 52428733
Alignment:
Q  9 tttgagagagcttatgaaaacaacttatga 38  Q
    ||||||||||||||||||||||||||||||    
T  52428762 tttgagagagcttatgaaaacaacttatga 52428733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 2236945 - 2236985
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacat 41  Q
    ||||||||||||||| | |||||||||||||||||| ||||    
T  2236945 tgagactgtttgagataacttatgaaaacaacttatcacat 2236985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 2841731 - 2841675
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtttt 57  Q
    ||||| |||||| ||||| |||||||| |||||||||||||| |  |||||||||||    
T  2841731 tgagattgtttgcgagagtttatgaaagcaacttatgacatgtcaataagttgtttt 2841675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 25904187 - 25904223
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatg 37  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  25904187 tgagactgtttgggagagcttatgaaaacagcttatg 25904223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 46090779 - 46090835
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtttt 57  Q
    ||||||||| ||||| |||||||||||||| |||| ||||||  ||| |||||||||    
T  46090779 tgagactgtatgagatagcttatgaaaacagcttaagacatgttcgttagttgtttt 46090835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 1e-20; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 9556331 - 9556209
Alignment:
Q  14 gagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttata 113  Q
    |||||||||||||||||||| |||||||| || ||||| | ||| |||||||||| ||||  | |||||||||| ||||||||||| |||||||||| ||    
T  9556331 gagagcttatgaaaacaactaatgacatgtccataagtagatttcaacttattttcataagctttctaggatagcttatgaaaacagtttatagcttgta 9556232  T
Q  114 ttgaaacac--tgactttatttt 134  Q
    |  ||||||  ||||||||||||    
T  9556231 tgaaaacacgttgactttatttt 9556209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 30552612 - 30552722
Alignment:
Q  5 actgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttg-ttttaaacttatttttataacttctctaggatagtttatgaaaacaattt 103  Q
    ||||||||||| || ||||  ||||||||||||||||| |  ||||||| |||| | |||||||  ||||  |||||||||||||||||||||| |||||    
T  30552612 actgtttgagataggttatcgaaacaacttatgacatgtcaataagttggtttttagcttatttccataagctctctaggatagtttatgaaaataattt 30552711  T
Q  104 atagcttatat 114  Q
    |||||| ||||    
T  30552712 atagctgatat 30552722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 17 - 114
Target Start/End: Complemental strand, 10285949 - 10285852
Alignment:
Q  17 agcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttatat 114  Q
    |||||||||||| ||||||||||||| || |||| |||||| |||||||||  |||| ||||||| | ||| ||||| |||| | |||||||||||||    
T  10285949 agcttatgaaaataacttatgacatgtccataagctgttttcaacttatttccataagttctctatgttagcttatgcaaacgacttatagcttatat 10285852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 27699494 - 27699599
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 100  Q
    |||||||||||||||||| |||||||||||||||||||||| |||  | | |||||| | |||||||  ||   ||||| | ||||||||||||||||||    
T  27699494 tgagactgtttgagagagtttatgaaaacaacttatgacatcaccacatgctgttttcagcttatttccatcgattctccatgatagtttatgaaaacaa 27699593  T
Q  101 tttata 106  Q
     |||||    
T  27699594 cttata 27699599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 6 - 111
Target Start/End: Complemental strand, 28933923 - 28933819
Alignment:
Q  6 ctgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttat 105  Q
    |||||||  ||||||||||||||||||||||| ||||  | || | |||||| ||||||||| ||| |  |||||||||||| |||||||||||||||||    
T  28933923 ctgtttggaagagcttatgaaaacaacttatggcatgttcata-gctgttttcaacttatttctatcagctctctaggatagcttatgaaaacaatttat 28933825  T
Q  106 agctta 111  Q
    | ||||    
T  28933824 aactta 28933819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 32821912 - 32821806
Alignment:
Q  3 agactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatt 102  Q
    ||||||||||  |||| ||||  ||||||||||||||||| || |||| |||||| |  |||||| |||||  ||| |||||||| ||||||||||| ||    
T  32821912 agactgtttggaagagtttatagaaacaacttatgacatgtccataagctgttttcagtttatttctataagctctttaggatagcttatgaaaacagtt 32821813  T
Q  103 tatagct 109  Q
    |||||||    
T  32821812 tatagct 32821806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 15120283 - 15120186
Alignment:
Q  6 ctgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaattt 103  Q
    ||||||| ||||||||||| |||||||||||||||||  | | || |||||||| |||||||| ||||  |||| | ||||| ||| |||||||||||    
T  15120283 ctgtttgggagagcttatggaaacaacttatgacatgttcattagctgttttaagcttattttgataagctctccatgatagcttacgaaaacaattt 15120186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 22681150 - 22681263
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 100  Q
    ||||| ||||||||||   |||||||||||||  || |||||  | |||| |||||| | |||||||  |||| ||||||||||||| |||||||||||     
T  22681150 tgagaatgtttgagagtttttatgaaaacaacaaataacatgttcataagctgtttttagcttatttccataagttctctaggatagattatgaaaacag 22681249  T
Q  101 tttatagcttatat 114  Q
     |||||||||||||    
T  22681250 cttatagcttatat 22681263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 1494415 - 1494478
Alignment:
Q  5 actgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttt 68  Q
    |||||||||||||||||||||||||| ||||||||||| || |||  |||||| | ||||||||    
T  1494415 actgtttgagagagcttatgaaaacagcttatgacatgtccataaactgtttttagcttatttt 1494478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 26 - 121
Target Start/End: Complemental strand, 43141951 - 43141856
Alignment:
Q  26 aaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttatattgaaaca 121  Q
    ||||||||||||||||| || ||||||||||| |  ||||||  ||||  |||  ||||||| |||||||||||  ||||||||||||| ||||||    
T  43141951 aaacaacttatgacatgcccataagttgttttcattttatttccataaactcttcaggatagcttatgaaaacatcttatagcttatatggaaaca 43141856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 13220534 - 13220472
Alignment:
Q  5 actgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttattt 67  Q
    ||||||||||||| ||||| ||||||||||||||| ||  | |||| ||||||||||||||||    
T  13220534 actgtttgagagaacttataaaaacaacttatgacttgttcataagctgttttaaacttattt 13220472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 14 - 100
Target Start/End: Original strand, 43065428 - 43065514
Alignment:
Q  14 gagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 100  Q
    ||||||||||||||||||||||||||||| || ||| ||||||| | |||||||  ||||  |||| | ||||  ||||||||||||    
T  43065428 gagagcttatgaaaacaacttatgacatgtccataaattgttttcagcttatttcaataagctctccacgataacttatgaaaacaa 43065514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 102
Target Start/End: Original strand, 44606078 - 44606176
Alignment:
Q  4 gactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatt 102  Q
    |||||||||  ||| |||||||||||||||||||||||| || ||||||||||| | || ||||| |||| |  | ||| |||  ||||||||||||||    
T  44606078 gactgtttggaagaacttatgaaaacaacttatgacatgtccataagttgttttcagctgattttcataagtgttttagaataacttatgaaaacaatt 44606176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 1318341 - 1318300
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatg 42  Q
    |||||||||||| ||||||||||||||||| |||||||||||    
T  1318341 tgagactgtttgtgagagcttatgaaaacatcttatgacatg 1318300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 6993689 - 6993802
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 100  Q
    ||||||||||||| ||| |||||| ||| | |||||| |||| || |||||  |||| | |||||||| ||||  |||| || |||| ||||||||||||    
T  6993689 tgagactgtttgatagaacttatgtaaatagcttatggcatgtccataagtcatttttagcttattttcataagctctcaagcatagcttatgaaaacaa 6993788  T
Q  101 tttatagcttatat 114  Q
      ||||||||||||    
T  6993789 cctatagcttatat 6993802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 10567162 - 10567057
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 100  Q
    |||||||||||| ||||| || || ||||| |||||||||||| | ||||||||||| | || ||||| | ||  |||| || |||||||||| |||||     
T  10567162 tgagactgtttgggagagattgtggaaacagcttatgacatgatcataagttgttttcagctaattttcacaagctctccagaatagtttatggaaacag 10567063  T
Q  101 tttata 106  Q
    ||||||    
T  10567062 tttata 10567057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 33942257 - 33942145
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaa--caacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaac 98  Q
    |||||||||||||||||||||||| | |  ||||||||||||||  | |||| |||||| | || ||||| || |  |||||| ||| | ||||||||||    
T  33942257 tgagactgtttgagagagcttatggagagacaacttatgacatgttcataagctgttttcagctaattttcattagctctctatgatggcttatgaaaac 33942158  T
Q  99 aatttatagctta 111  Q
    || ||||||||||    
T  33942157 aacttatagctta 33942145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 1899986 - 1899934
Alignment:
Q  61 cttatttttataacttctctaggatagtttatgaaaacaatttatagcttata 113  Q
    |||||||||||||  ||| ||| |||||||||||||||| |||||||||||||    
T  1899986 cttatttttataaactctttagaatagtttatgaaaacattttatagcttata 1899934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 67
Target Start/End: Original strand, 9878661 - 9878713
Alignment:
Q  15 agagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttattt 67  Q
    |||||||||| ||||||||||||||||| || |||||||||||  ||||||||    
T  9878661 agagcttatggaaacaacttatgacatgtccataagttgttttcgacttattt 9878713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 14316110 - 14316222
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 100  Q
    ||||||| |||  ||||||||||| ||||||||||||||||     |||| |||||| | ||||||| |||| |||||| | ||| |  |||||||| ||    
T  14316110 tgagactattttggagagcttatggaaacaacttatgacatatgtataagctgttttcagcttatttctatagcttctcaaagattgcatatgaaaataa 14316209  T
Q  101 tttatagcttata 113  Q
    |||||||||||||    
T  14316210 tttatagcttata 14316222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 27317485 - 27317449
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatg 37  Q
    ||||||||||||||||| |||||||||||||||||||    
T  27317485 tgagactgtttgagagaacttatgaaaacaacttatg 27317449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 34652001 - 34652097
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaa 97  Q
    |||||| ||| |||| |||||||  ||||||||||||||||| || |||| |||||| |||||||||  ||||  |||| | ||||| |||||||||    
T  34652001 tgagacggttggagaaagcttatagaaacaacttatgacatgtccataagctgttttcaacttatttccataagctctccaagatagcttatgaaaa 34652097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 106
Target Start/End: Original strand, 35810771 - 35810863
Alignment:
Q  14 gagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttata 106  Q
    ||||||||||  |||||||||||| | || || |||||| |||| | |||| ||| |||| |||||||||||||  |||||||||||| ||||    
T  35810771 gagagcttatagaaacaacttatggcctggccataagttatttttagcttactttcataagttctctaggatagcgtatgaaaacaatatata 35810863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 11063592 - 11063521
Alignment:
Q  2 gagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataa 73  Q
    |||||||||||  |||||||||| |||||  |||||||||| || ||||||||||| | |||||||| ||||    
T  11063592 gagactgtttggaagagcttatggaaacatattatgacatgtccataagttgtttttagcttattttcataa 11063521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 33192306 - 33192212
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaa 96  Q
    ||||||||||||| ||| ||||||||||||  |||||||||  || |||| |||||| | ||||| |||||||  |||| ||||||| ||||||||    
T  33192306 tgagactgtttga-agaacttatgaaaacagtttatgacatatccataagctgttttcagcttatatttataagctctccaggatagcttatgaaa 33192212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 40
Target Start/End: Complemental strand, 39622052 - 39622017
Alignment:
Q  5 actgtttgagagagcttatgaaaacaacttatgaca 40  Q
    ||||||||||||| ||||||||||||||||||||||    
T  39622052 actgtttgagagaacttatgaaaacaacttatgaca 39622017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 43808661 - 43808622
Alignment:
Q  3 agactgtttgagagagcttatgaaaacaacttatgacatg 42  Q
    ||||| |||||||||||||||||||| |||||||||||||    
T  43808661 agactatttgagagagcttatgaaaataacttatgacatg 43808622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 4550849 - 4550811
Alignment:
Q  4 gactgtttgagagagcttatgaaaacaacttatgacatg 42  Q
    ||||||||| ||||||||||| |||||||||||||||||    
T  4550849 gactgtttgggagagcttatggaaacaacttatgacatg 4550811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 113
Target Start/End: Complemental strand, 9477999 - 9477945
Alignment:
Q  59 aacttatttttataacttctctaggatagtttatgaaaacaatttatagcttata 113  Q
    |||||||||| ||||| |||| ||||||| |||||||||||| ||||| ||||||    
T  9477999 aacttattttcataacctctccaggatagcttatgaaaacaacttataacttata 9477945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 12313138 - 12313248
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 100  Q
    ||||| |||||| ||||  ||||||||||| |||||| ||||  | ||||||| ||| | |||||||| ||||  |||| | ||||| ||||| ||||||    
T  12313138 tgagattgtttgggagaatttatgaaaacagcttatgccatgttcataagttgatttcaccttattttcataagctctccaagatagcttatgtaaacaa 12313237  T
Q  101 tttatagctta 111  Q
    ||| |||||||    
T  12313238 tttgtagctta 12313248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 13234609 - 13234547
Alignment:
Q  3 agactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttat 65  Q
    |||||||||||||| |||||  ||||||  |||||||||| || ||||||||||| |||||||    
T  13234609 agactgtttgagagtgcttacaaaaacacattatgacatgtccataagttgttttcaacttat 13234547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 32106764 - 32106866
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 100  Q
    |||||||||||| |||| |||||||||||| ||||||||||  | ||||| |||||| || |||| || ||||  |||  ||||||  |||||||| |||    
T  32106764 tgagactgtttgtgagaacttatgaaaacagcttatgacatatctgtaagctgttttcaaattatgttcataagctcttcaggataacttatgaaagcaa 32106863  T
Q  101 ttt 103  Q
    |||    
T  32106864 ttt 32106866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 113
Target Start/End: Complemental strand, 33941996 - 33941902
Alignment:
Q  19 cttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttata 113  Q
    |||||||||||||||||||||| |  | |||| || ||| |||||||| | ||||  |||| | ||||| |||||||||||| ||||| ||||||    
T  33941996 cttatgaaaacaacttatgacaagttcataagctgctttcaacttattatcataaactctccaagatagcttatgaaaacaagttataacttata 33941902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 1741997 - 1742038
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatg 42  Q
    ||||||| |||| ||||||||||| |||||||||||||||||    
T  1741997 tgagactatttgggagagcttatggaaacaacttatgacatg 1742038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 99
Target Start/End: Original strand, 1939302 - 1939395
Alignment:
Q  6 ctgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 99  Q
    |||||| |||||| || | | |||||||||||||||| || |||| |||||| |||||||||  ||||  |||| || |||| |||||||||||    
T  1939302 ctgttttagagagattgtaataacaacttatgacatgtccataagctgttttcaacttatttccataagctctccagtatagcttatgaaaaca 1939395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 7862865 - 7862824
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatg 42  Q
    |||||||||| ||||||||||| ||||||||||||| |||||    
T  7862865 tgagactgttcgagagagcttacgaaaacaacttataacatg 7862824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 114
Target Start/End: Complemental strand, 8017531 - 8017426
Alignment:
Q  9 tttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagc 108  Q
    |||| |||| |||||||||||| ||||||| |||  | ||| |||||||   | |||||| |||| ||||| | ||||| ||||||||||| |||| |||    
T  8017531 tttgggagaacttatgaaaacagcttatgatatgttcataatttgttttctgcgtattttcataagttctccaagatagcttatgaaaacagtttacagc 8017432  T
Q  109 ttatat 114  Q
    ||||||    
T  8017431 ttatat 8017426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 9478401 - 9478348
Alignment:
Q  4 gactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtttt 57  Q
    ||||||||||||||| ||||| ||||||||||| ||||| || |||| ||||||    
T  9478401 gactgtttgagagagtttatgcaaacaacttattacatgtccataagctgtttt 9478348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 41
Target Start/End: Complemental strand, 12140630 - 12140597
Alignment:
Q  8 gtttgagagagcttatgaaaacaacttatgacat 41  Q
    |||||||||| |||||||||||||||||||||||    
T  12140630 gtttgagagaacttatgaaaacaacttatgacat 12140597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 13866983 - 13866942
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatg 42  Q
    ||||||||||||||||| |||| ||||||||| |||||||||    
T  13866983 tgagactgtttgagagaacttaagaaaacaacctatgacatg 13866942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 28803495 - 28803536
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatg 42  Q
    ||||||||||||||||| | |||| |||||||||||||||||    
T  28803495 tgagactgtttgagagaacatatggaaacaacttatgacatg 28803536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 35378994 - 35379079
Alignment:
Q  14 gagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 99  Q
    ||||||||||||||||| || ||||| ||  | ||||||||||| | |||||||| ||||  |||| | ||||| |||||||||||    
T  35378994 gagagcttatgaaaacagctgatgacttgttcataagttgttttcagcttattttcataagctctccaagatagcttatgaaaaca 35379079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 787433 - 787381
Alignment:
Q  5 actgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtttt 57  Q
    |||||||| |||| |||||||||||| ||||||||||| || |||| ||||||    
T  787433 actgtttgtgagaacttatgaaaacagcttatgacatgtccataagctgtttt 787381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 3973645 - 3973609
Alignment:
Q  3 agactgtttgagagagcttatgaaaacaacttatgac 39  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  3973645 agactgtttgagagagcatatggaaacaacttatgac 3973609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 42
Target Start/End: Complemental strand, 4350794 - 4350754
Alignment:
Q  2 gagactgtttgagagagcttatgaaaacaacttatgacatg 42  Q
    |||| ||||||||||| |||||||||||| |||||||||||    
T  4350794 gagattgtttgagagaacttatgaaaacagcttatgacatg 4350754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 9996843 - 9996771
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataa 73  Q
    |||||||| ||| ||||||||||  ||||||||||||||||  || ||| ||||| | |||||||||| ||||    
T  9996843 tgagactgcttgggagagcttatagaaacaacttatgacatacccataaattgttctcaacttattttcataa 9996771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 67
Target Start/End: Original strand, 14451037 - 14451081
Alignment:
Q  23 tgaaaacaacttatgacatgaccgtaagttgttttaaacttattt 67  Q
    ||||||||||||||||||||||| |||| |||||| | |||||||    
T  14451037 tgaaaacaacttatgacatgaccataagctgttttcagcttattt 14451081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 16451224 - 16451184
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacat 41  Q
    |||||| ||||| |||| |||||||||||||||||||||||    
T  16451224 tgagaccgtttgggagaacttatgaaaacaacttatgacat 16451184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 78
Target Start/End: Complemental strand, 31096393 - 31096329
Alignment:
Q  14 gagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttct 78  Q
    |||||||||||||||||  | || ||||| || |||| ||||||||||||||||| |||| ||||    
T  31096393 gagagcttatgaaaacagttaataacatgtccataagctgttttaaacttattttcataagttct 31096329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 37474870 - 37474814
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtttt 57  Q
    ||||||| ||||||||||||||||||||| |||| ||| ||| || | |||||||||    
T  37474870 tgagactctttgagagagcttatgaaaactacttgtgatatgtccattagttgtttt 37474814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 113
Target Start/End: Complemental strand, 43199439 - 43199407
Alignment:
Q  81 aggatagtttatgaaaacaatttatagcttata 113  Q
    |||||||||||||||||||| ||||||||||||    
T  43199439 aggatagtttatgaaaacaacttatagcttata 43199407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 43456674 - 43456738
Alignment:
Q  3 agactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttattt 67  Q
    ||||||||||| ||||||| ||||||||||| |||||||| || |||  |||||| | |||||||    
T  43456674 agactgtttgaaagagcttgtgaaaacaactcatgacatgtccataaactgttttcagcttattt 43456738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 6e-19; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 46082141 - 46082026
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggata--gtttatgaaaac 98  Q
    ||||||||||   |||||||||||||||||||||||||||||||| ||||||||||| | |||||||| ||||  |||| || |||  || |||||||||    
T  46082141 tgagactgttaatgagagcttatgaaaacaacttatgacatgaccataagttgttttcagcttattttcataagctctccagaatagcgtctatgaaaac 46082042  T
Q  99 aatttatagcttatat 114  Q
    || ||||| |||||||    
T  46082041 aacttataacttatat 46082026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 34754775 - 34754887
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 100  Q
    |||||||||||||||||||||| ||||||| ||||||||| | |  ||||||||||| | |||||||  || |  |||| ||||||||||||||||||||    
T  34754775 tgagactgtttgagagagcttaagaaaacatcttatgacaagcctataagttgttttcagcttatttccatcagctctc-aggatagtttatgaaaacaa 34754873  T
Q  101 tttatagcttatat 114  Q
     |||  ||||||||    
T  34754874 cttacggcttatat 34754887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 48157085 - 48157205
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 100  Q
    |||||||||||| ||||||||||  |||||||||||| |||| || |||| |||||| | |||||||  ||||  ||||  | |||| || |||||||||    
T  48157085 tgagactgtttgggagagcttatagaaacaacttatgccatgtccataagctgttttcagcttatttccataagatctcccgaatagcttgtgaaaacaa 48157184  T
Q  101 tttatagcttatattgaaaca 121  Q
     |||||||||||||| |||||    
T  48157185 attatagcttatattaaaaca 48157205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 25670551 - 25670673
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 100  Q
    ||||||||||||||| | ||||||||||||||||||||||||    ||| ||||||| | |||||||| | ||  |||| | ||||  |||| |||||||    
T  25670551 tgagactgtttgagaaaacttatgaaaacaacttatgacatgttaataaattgttttcagcttattttcacaagctctccaagatatgttataaaaacaa 25670650  T
Q  101 tttatagcttatattgaaacact 123  Q
    || |||||||||||  |||||||    
T  25670651 ttgatagcttatatgaaaacact 25670673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 10 - 68
Target Start/End: Complemental strand, 30496801 - 30496743
Alignment:
Q  10 ttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttt 68  Q
    ||||||||||||||||||||| |||||| |||| |||||||||||||| | ||||||||    
T  30496801 ttgagagagcttatgaaaacagcttatggcatgcccgtaagttgttttcagcttatttt 30496743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 33894732 - 33894666
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttattt 67  Q
    |||||||||||| ||||||||||||||||| | ||||||||| || ||||||||||| | |||||||    
T  33894732 tgagactgtttgtgagagcttatgaaaacagcatatgacatgtccataagttgttttcagcttattt 33894666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 38010819 - 38010706
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 100  Q
    ||||| ||||||||||   |||||||||||||  || |||||  | |||| |||||| | |||||||  |||| ||||||||||||| |||||||||||     
T  38010819 tgagaatgtttgagagtttttatgaaaacaacaaataacatgttcataagctgtttttagcttatttccataagttctctaggatagattatgaaaacag 38010720  T
Q  101 tttatagcttatat 114  Q
     |||||||||||||    
T  38010719 cttatagcttatat 38010706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 9 - 121
Target Start/End: Original strand, 44151449 - 44151565
Alignment:
Q  9 tttgagagagcttatgaaaacaactt----atgacatgaccgtaagttgttttaaacttatttttataa-cttctctaggatagtttatgaaaacaattt 103  Q
    ||||||||||||||||||||||| ||    |||||||| || |||| |||||| | |||||||  |||| ||| || || ||||||||||||||||| ||    
T  44151449 tttgagagagcttatgaaaacaatttttttatgacatgtccataagatgttttcagcttatttccataagcttttcaag-atagtttatgaaaacaactt 44151547  T
Q  104 atagcttatattgaaaca 121  Q
    ||||||||||| ||||||    
T  44151548 atagcttatatggaaaca 44151565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 28727729 - 28727800
Alignment:
Q  2 gagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataa 73  Q
    ||||||||||||||||||||||| ||||  |||||||||||  |||| |||||||| | ||||||| |||||    
T  28727729 gagactgtttgagagagcttatggaaacggcttatgacatgttcgtatgttgttttcagcttatttctataa 28727800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 12 - 111
Target Start/End: Original strand, 33645937 - 33646035
Alignment:
Q  12 gagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagctta 111  Q
    ||||||||||||| ||||||||||||||||| |  ||||||||||| |  ||||||  ||||  |||| | ||||| ||||||||||| |||||||||||    
T  33645937 gagagagcttatggaaacaacttatgacatgtctataagttgtttttaggttatttccataagctctcca-gatagcttatgaaaacagtttatagctta 33646035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 113
Target Start/End: Original strand, 3610723 - 3610817
Alignment:
Q  19 cttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttata 113  Q
    |||||| ||||| || |||||||| || ||||   |||| | ||||||| |||||  |||||||||||||||| |||||||| ||||||||||||    
T  3610723 cttatggaaacagctaatgacatgtccataagcctttttcagcttatttctataagctctctaggatagtttacgaaaacaacttatagcttata 3610817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 12242349 - 12242251
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 99  Q
    |||||||||||||||||||||||| ||||  ||||||| ||| |  ||||||||||| | ||||||| ||||  || || |||||| ||||| ||||||    
T  12242349 tgagactgtttgagagagcttatgcaaacggcttatgatatgcctataagttgttttcagcttatttctatacgttgtccaggataatttattaaaaca 12242251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 27626088 - 27626154
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttattt 67  Q
    ||||| ||||||||| |||||||| ||||| ||||||||||| || |||  ||||||||||||||||    
T  27626088 tgagattgtttgagaaagcttatggaaacagcttatgacatgtccataaactgttttaaacttattt 27626154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 34036005 - 34035919
Alignment:
Q  19 cttatgaaaacaacttatgacat-gaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaattta 104  Q
    |||||||||| |||||||||||| |  | ||||||||||| ||||||||||   || ||||||| ||||| ||||||||||||||||    
T  34036005 cttatgaaaataacttatgacattgttcataagttgttttcaacttattttcgcaagttctctaagatagcttatgaaaacaattta 34035919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 22387861 - 22387902
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatg 42  Q
    |||||||||||| |||||||||||||||||||||||| ||||    
T  22387861 tgagactgtttgggagagcttatgaaaacaacttatggcatg 22387902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 52 - 113
Target Start/End: Complemental strand, 39907857 - 39907796
Alignment:
Q  52 tgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttata 113  Q
    |||||| | |||||||| || | ||||||| ||||||||||||||||| |||||||||||||    
T  39907857 tgttttcagcttattttcattagttctctaagatagtttatgaaaacagtttatagcttata 39907796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 14 - 111
Target Start/End: Original strand, 44615082 - 44615179
Alignment:
Q  14 gagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagctta 111  Q
    ||||||||||||||||||||||||||||| ||  ||| |||||| |  ||||||  ||||  |||| ||| ||  ||||||||||| |||||||||||    
T  44615082 gagagcttatgaaaacaacttatgacatgtccacaagctgttttcacgttatttccataaactctcaaggctaacttatgaaaacagtttatagctta 44615179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 47427275 - 47427364
Alignment:
Q  8 gtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaa 97  Q
    ||||||||||||||||| ||||||||||||||||  |  |||| | ||| || ||||||||| |||  |||| || ||||||||||||||    
T  47427275 gtttgagagagcttatggaaacaacttatgacatctctataagctatttcaagcttatttttttaaactctcaagaatagtttatgaaaa 47427364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 3468719 - 3468623
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaa 97  Q
    |||||||||||  ||||| |  || |||||||| |||||||| || ||||||||||  |||||||||  | || ||||||||||||| |||||||||    
T  3468719 tgagactgtttcggagagttgttggaaacaactaatgacatgtccataagttgtttccaacttatttccacaagttctctaggatagattatgaaaa 3468623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 5276332 - 5276240
Alignment:
Q  5 actgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaa 97  Q
    |||||||||||||||||||| ||||| ||||||||||   | | ||||||||| | |||||||| || | || || ||||||| |||||||||    
T  5276332 actgtttgagagagcttatgcaaacatcttatgacatcttcattagttgttttcaccttattttcattagttttccaggatagcttatgaaaa 5276240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 23214960 - 23214920
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacat 41  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  23214960 tgagactgtttgagagaatttatgaaaacaacttatgacat 23214920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 36538013 - 36537957
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtttt 57  Q
    ||||| ||||||||||| |||||| |||||||||||||||||  | |||||||||||    
T  36538013 tgagattgtttgagagaacttatggaaacaacttatgacatgttcataagttgtttt 36537957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 6857310 - 6857369
Alignment:
Q  7 tgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatt 66  Q
    |||| ||||||||||||| ||||| |||||| |||| || ||||||||||| ||||||||    
T  6857310 tgttcgagagagcttatggaaacagcttatgccatgtccataagttgttttcaacttatt 6857369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 28691801 - 28691911
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 100  Q
    |||||||||| | |||| |||||||||||| |||||||| || || ||| ||||| | |  ||||||| ||||  |||| ||||||| ||||||||||||    
T  28691801 tgagactgttcg-gagatcttatgaaaacagcttatgacttgtccataaattgttatcagtttattttcataagatctccaggatagcttatgaaaacaa 28691899  T
Q  101 tttatagcttat 112  Q
    | |||| |||||    
T  28691900 tgtataacttat 28691911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 30535667 - 30535556
Alignment:
Q  2 gagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaat 101  Q
    ||||||||||  |||| |||||||||||||||||||| |||  |||||| |||||| |  ||||||| |||  |||| || ||||| ||||| |||||      
T  30535667 gagactgttttggagaacttatgaaaacaacttatgatatgttcgtaagctgttttcaggttattttcatatgttctataagatagcttatggaaacagc 30535568  T
Q  102 ttatagcttata 113  Q
    |||||| |||||    
T  30535567 ttatagattata 30535556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 39542266 - 39542377
Alignment:
Q  2 gagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaat 101  Q
    ||||| |||| |||||||||||| ||| ||||||||||||| | || |||| |   ||||||||||| ||||  |||| ||||||  ||||| ||||||     
T  39542266 gagacagttttagagagcttatggaaataacttatgacatgtctgtcagttttaacaaacttattttcataagctctccaggataacttatggaaacaac 39542365  T
Q  102 ttatagcttata 113  Q
    ||||| ||||||    
T  39542366 ttatatcttata 39542377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 83 - 114
Target Start/End: Original strand, 39711453 - 39711484
Alignment:
Q  83 gatagtttatgaaaacaatttatagcttatat 114  Q
    ||||||||||||||||||||||||||||||||    
T  39711453 gatagtttatgaaaacaatttatagcttatat 39711484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 9038198 - 9038109
Alignment:
Q  19 cttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagct 109  Q
    ||||| |||||| |||||||||||  | ||| ||||||| | |||||||| | || ||||| | ||||||||||||||||| |||||||||    
T  9038198 cttataaaaacagcttatgacatgttcataa-ttgttttcagcttattttcacaagttctccatgatagtttatgaaaacagtttatagct 9038109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 15740394 - 15740448
Alignment:
Q  19 cttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataa 73  Q
    ||||||||||||||||||||||||  | |||| |||||| |||||||||| ||||    
T  15740394 cttatgaaaacaacttatgacatgttcataagctgtttttaacttattttcataa 15740448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 114
Target Start/End: Complemental strand, 21453324 - 21453286
Alignment:
Q  76 tctctaggatagtttatgaaaacaatttatagcttatat 114  Q
    |||||||||||| ||||||||||| ||||||||||||||    
T  21453324 tctctaggatagcttatgaaaacagtttatagcttatat 21453286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 106
Target Start/End: Original strand, 24363601 - 24363671
Alignment:
Q  36 tgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttata 106  Q
    ||||||| || ||||||||||| | |||||||  ||||| |||| ||||||| |||||||||||| |||||    
T  24363601 tgacatgtccataagttgttttcagcttatttccataacctctccaggatagcttatgaaaacaacttata 24363671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 36598321 - 36598387
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttattt 67  Q
    ||||| |||||||||||||||||| ||||| |||||||||||  | |||| |||||| | |||||||    
T  36598321 tgagattgtttgagagagcttatggaaacatcttatgacatgttcataagctgttttcagcttattt 36598387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 39360128 - 39360062
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttattt 67  Q
    ||||||||||||| |||| ||||| ||||||||||||||||  || ||||||| ||| | |||||||    
T  39360128 tgagactgtttgatagagtttatggaaacaacttatgacatatccataagttgctttcagcttattt 39360062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 44808261 - 44808191
Alignment:
Q  3 agactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataa 73  Q
    ||||||||||| ||| |||||||||| ||||||||||||| || |||  |||||| | |||||||| ||||    
T  44808261 agactgtttgatagaccttatgaaaataacttatgacatgtccataacctgttttcagcttattttcataa 44808191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 113
Target Start/End: Complemental strand, 44822018 - 44821952
Alignment:
Q  47 taagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttata 113  Q
    ||||||||||| |||||||||| |||| ||||| || |||| |||||||||||  ||||| ||||||    
T  44822018 taagttgttttcaacttattttcataagttctccagaatagcttatgaaaacagcttataacttata 44821952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 100
Target Start/End: Original strand, 47046134 - 47046172
Alignment:
Q  62 ttatttttataacttctctaggatagtttatgaaaacaa 100  Q
    |||||||||||| ||||||||||||| ||||||||||||    
T  47046134 ttatttttataatttctctaggatagcttatgaaaacaa 47046172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 81
Target Start/End: Complemental strand, 17983838 - 17983769
Alignment:
Q  12 gagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctcta 81  Q
    ||||||| | ||| |||| | |||||| ||| ||||||||||||||||||||||||  |||| |||||||    
T  17983838 gagagagttgatggaaacgatttatgatatgtccgtaagttgttttaaacttatttcaataagttctcta 17983769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 110
Target Start/End: Original strand, 20881661 - 20881710
Alignment:
Q  61 cttatttttataacttctctaggatagtttatgaaaacaatttatagctt 110  Q
    |||||||| |||| |||| || |||||||||||||||||| |||||||||    
T  20881661 cttattttcataagttctttaagatagtttatgaaaacaacttatagctt 20881710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 25422431 - 25422390
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatg 42  Q
    |||||||||||| ||||||||||| ||||| |||||||||||    
T  25422431 tgagactgtttgggagagcttatggaaacaccttatgacatg 25422390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 28340386 - 28340426
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatg 42  Q
    |||||||||| | |||||||||||||||||||||||||||||    
T  28340386 tgagactgttgg-gagagcttatgaaaacaacttatgacatg 28340426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 31003045 - 31003004
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatg 42  Q
    ||||||||||||||| || |||| ||||||||||||||||||    
T  31003045 tgagactgtttgagaaagtttataaaaacaacttatgacatg 31003004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 3804437 - 3804405
Alignment:
Q  4 gactgtttgagagagcttatgaaaacaacttat 36  Q
    ||||||||||||||| |||||||||||||||||    
T  3804437 gactgtttgagagagtttatgaaaacaacttat 3804405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 4970756 - 4970792
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatg 37  Q
    |||||||||||| |||| |||||||||||||||||||    
T  4970756 tgagactgtttgggagaacttatgaaaacaacttatg 4970792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 99
Target Start/End: Complemental strand, 7244779 - 7244687
Alignment:
Q  7 tgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 99  Q
    ||||||| |||||| ||| |||||| ||||||||||  | ||||||||||| | |||||||| ||||  |||| |  |||| |||||||||||    
T  7244779 tgtttgaaagagctgatggaaacaatttatgacatgctcataagttgttttcagcttattttcataagctctccaatatagcttatgaaaaca 7244687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 28165196 - 28165076
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 100  Q
    ||||||| ||||||| |||||||| ||||| || | ||| ||  | |||| |||||| |||||||||  ||||  |||| | ||||| |||| || |||     
T  28165196 tgagactctttgagatagcttatggaaacagctcaagacctgttcataagctgttttcaacttatttccataagctctccatgatagcttataaagacag 28165097  T
Q  101 tttatagcttatattgaaaca 121  Q
    ||||||||||||||| |||||    
T  28165096 tttatagcttatattaaaaca 28165076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 28844591 - 28844539
Alignment:
Q  5 actgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtttt 57  Q
    |||||||  |||||||| |||||||||||||||||||| || | |||||||||    
T  28844591 actgtttaggagagcttctgaaaacaacttatgacatgtccatcagttgtttt 28844539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 41
Target Start/End: Complemental strand, 31149737 - 31149705
Alignment:
Q  9 tttgagagagcttatgaaaacaacttatgacat 41  Q
    |||||||||||||||||||| ||||||||||||    
T  31149737 tttgagagagcttatgaaaataacttatgacat 31149705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 41
Target Start/End: Complemental strand, 31168029 - 31167997
Alignment:
Q  9 tttgagagagcttatgaaaacaacttatgacat 41  Q
    |||||||||||||||||||| ||||||||||||    
T  31168029 tttgagagagcttatgaaaataacttatgacat 31167997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 109
Target Start/End: Complemental strand, 39968013 - 39967917
Alignment:
Q  14 gagagcttatgaaaacaacttatgacat-gaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagct 109  Q
    |||| |||||||||||| |||||| ||| |  | |||| |||||| |||||||||| || | ||||||  ||||| |||||||||||| ||||||||    
T  39968013 gagaacttatgaaaacagcttatggcattgttcataagctgttttcaacttattttcattagttctctcagatagcttatgaaaacaacttatagct 39967917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 1e-17; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 2460116 - 2460182
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttattt 67  Q
    |||||||||||||||||||||||| ||||||||||||||||| |  ||||||||||| |||||||||    
T  2460116 tgagactgtttgagagagcttatggaaacaacttatgacatgtctttaagttgttttcaacttattt 2460182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 114
Target Start/End: Complemental strand, 4006805 - 4006706
Alignment:
Q  15 agagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttatat 114  Q
    ||||||| ||||||||||||| || ||| || |||||| |||| | |||||||| ||||| ||||  |||||| |||||||||||| |||||||||||||    
T  4006805 agagcttgtgaaaacaacttacgatatgtccataagttattttcagcttattttcataacctctcagggatagcttatgaaaacaacttatagcttatat 4006706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 93
Target Start/End: Complemental strand, 34939612 - 34939526
Alignment:
Q  7 tgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatg 93  Q
    |||||||||||||||||| ||||||||||||||| | |||||||||||||| | |||||||  ||||| |||  ||||||| |||||    
T  34939612 tgtttgagagagcttatggaaacaacttatgacacgtccgtaagttgttttcagcttatttccataacctcttcaggatagcttatg 34939526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 281813 - 281926
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 100  Q
    |||||||||||| ||||||| ||| || |||||||||||||| |  ||||||||||| | |||||||  || |  |||||||||||| ||||||| |||     
T  281813 tgagactgtttgggagagctaatggaagcaacttatgacatgtctataagttgttttcagcttatttccatgagctctctaggatagcttatgaacacag 281912  T
Q  101 tttatagcttatat 114  Q
     |||||||||||||    
T  281913 cttatagcttatat 281926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 8035114 - 8035226
Alignment:
Q  2 gagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaat 101  Q
    |||||| |||| |||| |||| |||||||||||||||||||  | ||| ||||||| ||||||||||  |||  | |||||||||  ||||||||||||     
T  8035114 gagactatttgggagaacttaagaaaacaacttatgacatggtcataacttgttttcaacttattttcgtaagctttctaggataacttatgaaaacaac 8035213  T
Q  102 ttatagcttatat 114  Q
    || ||||||||||    
T  8035214 ttctagcttatat 8035226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 8348327 - 8348275
Alignment:
Q  5 actgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtttt 57  Q
    |||||||||||||||||| ||||||||||||| |||||||| |||||||||||    
T  8348327 actgtttgagagagcttacgaaaacaacttataacatgaccataagttgtttt 8348275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 10616514 - 10616578
Alignment:
Q  9 tttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataa 73  Q
    |||| ||||||||||| ||||||||||||||||| ||||||||||| || | |||||||||||||    
T  10616514 tttgggagagcttatggaaacaacttatgacatgtccgtaagttgtgttcagcttatttttataa 10616578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 14 - 114
Target Start/End: Complemental strand, 30523751 - 30523652
Alignment:
Q  14 gagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttata 113  Q
    |||| |||||| |||||||||||| ||||  | |||| |||||| |||| |||| |||||| |||| ||||||| ||||||||| || ||||||||||||    
T  30523751 gagatcttatggaaacaacttatgccatgttcataagctgttttcaactaatttctataacctctcaaggatagcttatgaaaa-aacttatagcttata 30523653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 19 - 111
Target Start/End: Complemental strand, 31624177 - 31624085
Alignment:
Q  19 cttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagctta 111  Q
    |||||||||||| |||||||||||  | |||| |||||| |||||||||| |||| ||||| | |||||  ||||||||||  ||||||||||    
T  31624177 cttatgaaaacagcttatgacatgttcataagctgttttcaacttattttcataatttctccaagatagcctatgaaaacagcttatagctta 31624085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 32577957 - 32578017
Alignment:
Q  7 tgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttattt 67  Q
    |||||||||||||||||||||||||||||||||||| || | || |||||| | |||||||    
T  32577957 tgtttgagagagcttatgaaaacaacttatgacatgtccttgagctgttttcagcttattt 32578017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 33500445 - 33500501
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtttt 57  Q
    |||||||||||||| |||||||||||||||| ||||||||||  | |||||||||||    
T  33500445 tgagactgtttgagggagcttatgaaaacaatttatgacatgtgcataagttgtttt 33500501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 73
Target Start/End: Complemental strand, 9027678 - 9027611
Alignment:
Q  6 ctgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataa 73  Q
    |||||||| |||||||||| ||| ||||||||||||| || ||||||||||| | |||||||| ||||    
T  9027678 ctgtttgaaagagcttatggaaataacttatgacatgtccataagttgttttcagcttattttcataa 9027611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 106
Target Start/End: Original strand, 20368147 - 20368250
Alignment:
Q  3 agactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatt 102  Q
    ||||| |||| |||| ||||||||||||||||||||||||  | |||| |  ||| |||||||||| |||| ||||| | || || |||||||||||| |    
T  20368147 agactatttgggagaacttatgaaaacaacttatgacatgttcataagctagtttcaacttattttcataagttctccaagaaagcttatgaaaacaact 20368246  T
Q  103 tata 106  Q
    ||||    
T  20368247 tata 20368250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 10476087 - 10476196
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 100  Q
    |||||||||||  ||||||||||| ||||| || ||||||||  ||||| ||||||| | ||||||| |||| | |||| | ||||| ||||||||||||    
T  10476087 tgagactgtttatgagagcttatggaaacatctaatgacatgctcgtaaattgttttcagcttatttctatagc-tctccaagatagcttatgaaaacaa 10476185  T
Q  101 tttatagctta 111  Q
     ||| ||||||    
T  10476186 cttacagctta 10476196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 40
Target Start/End: Original strand, 32171349 - 32171387
Alignment:
Q  2 gagactgtttgagagagcttatgaaaacaacttatgaca 40  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  32171349 gagactgtttgagagagcttatgaaaacagcttatgaca 32171387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 114
Target Start/End: Complemental strand, 4246507 - 4246402
Alignment:
Q  9 tttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagc 108  Q
    |||||| |||||| || |||||||| |||||||| || |||| |||||| ||||||||||||||   |||| |  |||| |||||||||||  ||||||     
T  4246507 tttgagtgagcttttggaaacaactcatgacatgtccataagctgttttcaacttatttttatatgctctccataatagcttatgaaaacagcttataga 4246408  T
Q  109 ttatat 114  Q
    ||||||    
T  4246407 ttatat 4246402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 7931705 - 7931790
Alignment:
Q  15 agagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 100  Q
    ||||||||||||||||||||||||||||  | ||||||||||| | |||||||   |||  ||| |||||||| || |||||||||    
T  7931705 agagcttatgaaaacaacttatgacatgttcttaagttgttttcagcttatttccgtaagctctgtaggatagcttttgaaaacaa 7931790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 32917302 - 32917261
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatg 42  Q
    |||||||||||| ||||||||||| |||||||||||||||||    
T  32917302 tgagactgtttgggagagcttatggaaacaacttatgacatg 32917261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 48
Target Start/End: Original strand, 725631 - 725667
Alignment:
Q  12 gagagagcttatgaaaacaacttatgacatgaccgta 48  Q
    ||||||||||||||||||||||||||||||| |||||    
T  725631 gagagagcttatgaaaacaacttatgacatgtccgta 725667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 114
Target Start/End: Complemental strand, 2112280 - 2112192
Alignment:
Q  26 aaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttatat 114  Q
    |||||||||||||||||  | |||||||||||    |||||| |||||   ||||| |||||||||||||||||| |||||| ||||||    
T  2112280 aaacaacttatgacatgttcataagttgttttcggtttatttctataagcactctaagatagtttatgaaaacaacttatagtttatat 2112192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 27857459 - 27857423
Alignment:
Q  5 actgtttgagagagcttatgaaaacaacttatgacat 41  Q
    |||||||| ||||||||||||||||||||||||||||    
T  27857459 actgtttgggagagcttatgaaaacaacttatgacat 27857423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 33832238 - 33832318
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctcta 81  Q
    |||| |||||| ||||| ||||||||||||||||||||||||    ||||||||||| | |||||||| |||  |||||||    
T  33832238 tgagtctgtttaagagaacttatgaaaacaacttatgacatgtttataagttgtttttagcttattttcatatattctcta 33832318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 7485102 - 7485137
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttat 36  Q
    |||| |||||||||||||||||||||||||||||||    
T  7485102 tgaggctgtttgagagagcttatgaaaacaacttat 7485137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 20377898 - 20377941
Alignment:
Q  14 gagagcttatgaaaacaacttatgacatgaccgtaagttgtttt 57  Q
    ||||||||||||||||||||||||||||| |  |||||||||||    
T  20377898 gagagcttatgaaaacaacttatgacatgtctataagttgtttt 20377941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 1575982 - 1575928
Alignment:
Q  19 cttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataa 73  Q
    ||||||||||||||||||||||||  | |||| |||||| |||||||||| ||||    
T  1575982 cttatgaaaacaacttatgacatgttcataagctgtttttaacttattttcataa 1575928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 114
Target Start/End: Original strand, 2727896 - 2727934
Alignment:
Q  76 tctctaggatagtttatgaaaacaatttatagcttatat 114  Q
    |||||||||||| |||||||||||| |||||||||||||    
T  2727896 tctctaggatagcttatgaaaacaacttatagcttatat 2727934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 4081013 - 4080955
Alignment:
Q  9 tttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttattt 67  Q
    |||||||||  |||||||||||||||||| ||||  | ||||||||||| |||||||||    
T  4081013 tttgagagattttatgaaaacaacttatgccatgttcataagttgttttcaacttattt 4080955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 4324423 - 4324516
Alignment:
Q  5 actgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 99  Q
    ||||||||||||| ||||| |||||||||||||||||| || |||  || ||| | |||||||  |||| || || ||||||| |||||||||||    
T  4324423 actgtttgagagaacttat-aaaacaacttatgacatgtccctaaactgcttttagcttatttgcataagttttccaggatagcttatgaaaaca 4324516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 5566150 - 5566208
Alignment:
Q  9 tttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttattt 67  Q
    |||| ||||||| ||||||||| ||||| ||||| || ||||||||||| |||||||||    
T  5566150 tttgtgagagctaatgaaaacagcttattacatgtccataagttgttttcaacttattt 5566208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 10031837 - 10031771
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttattt 67  Q
    ||||||||||||| ||||| ||||||| ||||||| |||||  || ||||||||||| | |||||||    
T  10031837 tgagactgtttgaaagagcctatgaaaccaacttacgacatatccataagttgttttcatcttattt 10031771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 30863337 - 30863295
Alignment:
Q  15 agagcttatgaaaacaacttatgacatgaccgtaagttgtttt 57  Q
    ||||||||||||||||||||||||||||  | |||||||||||    
T  30863337 agagcttatgaaaacaacttatgacatgtacataagttgtttt 30863295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 115
Target Start/End: Complemental strand, 781472 - 781371
Alignment:
Q  15 agagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctc-taggatagtttatgaaaacaatttatagcttata 113  Q
    ||||||||||||||||| |||||||||| |||| |  |||||| | | ||||| |||||  |||| || |||| |||||||||| |  ||||||||||||    
T  781472 agagcttatgaaaacaaattatgacatgtccgtcaactgttttcagcatatttctataagctctcttaagataatttatgaaaaaagcttatagcttata 781373  T
Q  114 tt 115  Q
    ||    
T  781372 tt 781371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 2263293 - 2263256
Alignment:
Q  5 actgtttgagagagcttatgaaaacaacttatgacatg 42  Q
    ||||||||||||| |||||||||||||| |||||||||    
T  2263293 actgtttgagagaacttatgaaaacaacatatgacatg 2263256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 98
Target Start/End: Complemental strand, 3528884 - 3528811
Alignment:
Q  25 aaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaac 98  Q
    |||||||||||||||||| || ||| ||||||| | |||||||| ||||  |||| | ||||||| ||||||||    
T  3528884 aaaacaacttatgacatgtccataacttgttttcatcttattttcataagctctccaagatagttcatgaaaac 3528811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 113
Target Start/End: Original strand, 20671905 - 20671942
Alignment:
Q  76 tctctaggatagtttatgaaaacaatttatagcttata 113  Q
    |||||| |||||||||||||||||||||| ||||||||    
T  20671905 tctctatgatagtttatgaaaacaatttaaagcttata 20671942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 42
Target Start/End: Complemental strand, 31338073 - 31338040
Alignment:
Q  9 tttgagagagcttatgaaaacaacttatgacatg 42  Q
    |||| |||||||||||||||||||||||||||||    
T  31338073 tttgtgagagcttatgaaaacaacttatgacatg 31338040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 31594356 - 31594405
Alignment:
Q  8 gtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtttt 57  Q
    ||||||||||| ||||| ||||||||||||||||| || ||| |||||||    
T  31594356 gtttgagagaggttatggaaacaacttatgacatgtccttaatttgtttt 31594405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 31671087 - 31671152
Alignment:
Q  49 agttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttatat 114  Q
    ||||||||| | |||||||| ||||  | |||||||||||||| |||||||  |||||||||||||    
T  31671087 agttgttttcagcttattttcataagctatctaggatagtttacgaaaacagcttatagcttatat 31671152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 33116689 - 33116648
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatg 42  Q
    |||||||||||||| ||  |||||||||||||||||||||||    
T  33116689 tgagactgtttgagggaatttatgaaaacaacttatgacatg 33116648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 33498724 - 33498683
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatg 42  Q
    ||||||| ||||  ||||||||||||||||||||||||||||    
T  33498724 tgagactttttggtagagcttatgaaaacaacttatgacatg 33498683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 42
Target Start/End: Original strand, 1669776 - 1669804
Alignment:
Q  14 gagagcttatgaaaacaacttatgacatg 42  Q
    |||||||||||||||||||||||||||||    
T  1669776 gagagcttatgaaaacaacttatgacatg 1669804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 2027764 - 2027804
Alignment:
Q  2 gagactgtttgagagagcttatgaaaacaacttatgacatg 42  Q
    ||||||||||| ||||||||||  |||||||||||||||||    
T  2027764 gagactgtttgggagagcttatagaaacaacttatgacatg 2027804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 5731674 - 5731618
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtttt 57  Q
    ||||| ||||||  |||||||||||||| | ||||||| ||| ||||||||||||||    
T  5731674 tgagagtgtttggtagagcttatgaaaatagcttatgatatgtccgtaagttgtttt 5731618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 42
Target Start/End: Original strand, 6310228 - 6310256
Alignment:
Q  14 gagagcttatgaaaacaacttatgacatg 42  Q
    |||||||||||||||||||||||||||||    
T  6310228 gagagcttatgaaaacaacttatgacatg 6310256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 9559503 - 9559543
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacat 41  Q
    ||||||| |||| |||| |||||||||||||||||||||||    
T  9559503 tgagactatttgggagaacttatgaaaacaacttatgacat 9559543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 30604995 - 30604935
Alignment:
Q  7 tgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttattt 67  Q
    ||||||||||||||||| |||||||| ||||| |||  | |||||| |||| |||||||||    
T  30604995 tgtttgagagagcttattaaaacaacctatgaaatgttcataagttcttttcaacttattt 30604935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 1e-17; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 7218039 - 7218199
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 100  Q
    ||||| |||||| | |||||| ||||||| |||||||||| |  |  ||| |||||| |||||||||| |||| ||||| ||||||| ||||||||||||    
T  7218039 tgagattgtttgggggagcttgtgaaaacgacttatgacacgttcacaagctgttttcaacttattttcataagttctccaggataggttatgaaaacaa 7218138  T
Q  101 tttatagcttatattgaaaca--ctgactttatttttatatttcattatggaaatagcttat 160  Q
     |||||||||||||  |||||   |||||||| |||||  ||| ||||||||||||| ||||    
T  7218139 cttatagcttatatgaaaacaatttgacttta-ttttaccttttattatggaaatagattat 7218199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 6 - 114
Target Start/End: Original strand, 25005765 - 25005875
Alignment:
Q  6 ctgtttgagagagcttatgaaaacaacttatgacatg--accgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaattt 103  Q
    ||||||| |||||||||||||||||||||||||| |   |  ||||| | |||||| ||| |||||||||  |||| ||||||| |||||||||||| ||    
T  25005765 ctgtttgggagagcttatgaaaacaacttatgactttctatagtaagatattttaagcttgtttttataagctctccaggatagcttatgaaaacaactt 25005864  T
Q  104 atagcttatat 114  Q
    |||||||||||    
T  25005865 atagcttatat 25005875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 38867799 - 38867909
Alignment:
Q  4 gactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaattt 103  Q
    ||||||||||||||||||||| ||| ||||||||| ||| || | ||||||||| | |||||||| |||| ||||  | ||||  ||||||||||| |||    
T  38867799 gactgtttgagagagcttatggaaataacttatgatatgtccatcagttgtttttagcttattttcataagttcttcaagataacttatgaaaacagttt 38867898  T
Q  104 atagcttatat 114  Q
    | |||||||||    
T  38867899 aaagcttatat 38867909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 25479686 - 25479573
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 100  Q
    ||||||| |||| | ||||||||||||| |  ||||||||||  | | ||||||||| | |||||||| ||||  |||||||||||| ||||||||||||    
T  25479686 tgagactatttgtgtgagcttatgaaaatagattatgacatgttcattagttgttttcagcttattttcataagctctctaggatagcttatgaaaacaa 25479587  T
Q  101 tttatagcttatat 114  Q
     ||||||| |||||    
T  25479586 cttatagcctatat 25479573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 114
Target Start/End: Complemental strand, 17420294 - 17420195
Alignment:
Q  15 agagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttatat 114  Q
    |||||||||||||||||||||| ||||| || ||| ||||||| |||||||||  || | || |||  ||||| ||| ||||||| ||||||||||||||    
T  17420294 agagcttatgaaaacaacttattacatgtccataaattgttttcaacttatttccattagttttctgagatagcttacgaaaacagtttatagcttatat 17420195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 27887114 - 27887201
Alignment:
Q  32 cttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttatattgaaa 119  Q
    ||||||||||| || ||| ||||||| | ||||||||||||   |||| | |||||||||||||||||| ||||||||||||| ||||    
T  27887114 cttatgacatgtccataaattgtttttagcttatttttatatgctctccatgatagtttatgaaaacaacttatagcttatatggaaa 27887201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 4868504 - 4868439
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttattt 67  Q
    |||||||||||||||||| |||||||| |||||||||||||| |  ||||||||||| |||||||||    
T  4868504 tgagactgtttgagagagtttatgaaa-caacttatgacatgtcaataagttgttttcaacttattt 4868439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 106
Target Start/End: Original strand, 11639395 - 11639486
Alignment:
Q  15 agagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttata 106  Q
    |||||||||||||||| ||||||||||| || |||| |||||| | |||||||| ||||  ||||||| |||  ||||| ||||| ||||||    
T  11639395 agagcttatgaaaacagcttatgacatgtccataagctgtttttagcttattttcataagctctctagaataacttatgcaaacagtttata 11639486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 68
Target Start/End: Complemental strand, 4548821 - 4548759
Alignment:
Q  6 ctgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttt 68  Q
    |||||||||||| || ||| ||||||||||||||||| | |||||||||||| | ||||||||    
T  4548821 ctgtttgagagacctaatggaaacaacttatgacatgcctgtaagttgtttttagcttatttt 4548759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 97
Target Start/End: Original strand, 4699598 - 4699676
Alignment:
Q  19 cttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaa 97  Q
    ||||||||||||||||||||||||  | |||| |||||| | ||||||| |||||  ||||  ||||||||||||||||    
T  4699598 cttatgaaaacaacttatgacatgttcataagctgtttttagcttatttctataagctctccgggatagtttatgaaaa 4699676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 6262835 - 6262777
Alignment:
Q  9 tttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttattt 67  Q
    |||| ||||||||||||||| ||||||||| ||| || ||||||||||||| |||||||    
T  6262835 tttgggagagcttatgaaaataacttatgatatgtccataagttgttttaagcttattt 6262777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 114
Target Start/End: Original strand, 29045896 - 29045990
Alignment:
Q  20 ttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttatat 114  Q
    ||||||||||||||||||||||| || ||||||| ||| ||| || ||  || |  |||| |||| || |||||||||||| |||||||||||||    
T  29045896 ttatgaaaacaacttatgacatgtccataagttgcttttaacgtacttccatcatctctccaggacagcttatgaaaacaacttatagcttatat 29045990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 32515406 - 32515500
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaa 95  Q
    |||||||||||| ||||||||||| ||||| | ||||||||| |  ||||||||||| ||||||| | |||||  |||| | ||||| |||||||    
T  32515406 tgagactgtttgggagagcttatggaaacagcgtatgacatgtcaataagttgttttcaacttatatctataagctctccatgatagcttatgaa 32515500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 109
Target Start/End: Complemental strand, 35351098 - 35351036
Alignment:
Q  47 taagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagct 109  Q
    ||||||||||| | ||||||||| |||  |||||||||||||||||||| |||| ||||||||    
T  35351098 taagttgttttcagcttatttttgtaagctctctaggatagtttatgaagacaacttatagct 35351036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 114
Target Start/End: Complemental strand, 3224520 - 3224415
Alignment:
Q  9 tttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagc 108  Q
    |||||||||  ||||  |||| |||||||||||| || ||||||||| | | |||||||| |||| |||||||| |||| |||| ||||||   ||||||    
T  3224520 tttgagagaatttatacaaactacttatgacatgtccataagttgttctcagcttattttcataagttctctagaatagcttataaaaacaccctatagc 3224421  T
Q  109 ttatat 114  Q
    ||||||    
T  3224420 ttatat 3224415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 40
Target Start/End: Original strand, 5591933 - 5591970
Alignment:
Q  3 agactgtttgagagagcttatgaaaacaacttatgaca 40  Q
    |||||||||||||||||||||||||||| |||||||||    
T  5591933 agactgtttgagagagcttatgaaaacagcttatgaca 5591970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 31517705 - 31517818
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 100  Q
    |||||||||||| |||| ||||| ||||||||| ||||||||  | |||| |||||| | |||||||| ||||  |||| | || || ||||||| |||     
T  31517705 tgagactgtttgggagaacttatcaaaacaactcatgacatgttcataagctgttttcagcttattttcataagctctccaagacagattatgaagacag 31517804  T
Q  101 tttatagcttatat 114  Q
     |||||||||||||    
T  31517805 cttatagcttatat 31517818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 106
Target Start/End: Original strand, 33185927 - 33186027
Alignment:
Q  5 actgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaattta 104  Q
    |||||||||||||| |||||||||||| |||||||||  || |||  |||||| |||||||||  || |  |||||||||||| |||| ||||||| |||    
T  33185927 actgtttgagagagtttatgaaaacaaattatgacatttccataacctgttttcaacttatttacat-atatctctaggatagcttataaaaacaactta 33186025  T
Q  105 ta 106  Q
    ||    
T  33186026 ta 33186027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 112
Target Start/End: Original strand, 37842338 - 37842431
Alignment:
Q  19 cttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttat 112  Q
    |||||||||||| || ||||||||  | ||||  ||||| | ||||||||||||| ||||  | ||||| |||||||||||| |||||||||||    
T  37842338 cttatgaaaacatctaatgacatgttcataagcagttttcagcttatttttataagttcttcaagatagcttatgaaaacaacttatagcttat 37842431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 42336717 - 42336664
Alignment:
Q  4 gactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtttt 57  Q
    |||||||||||| | |||||||||||||||||||||||| ||  ||||||||||    
T  42336717 gactgtttgagataacttatgaaaacaacttatgacatgtccaaaagttgtttt 42336664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 1432560 - 1432508
Alignment:
Q  61 cttatttttataacttctctaggatagtttatgaaaacaatttatagcttata 113  Q
    |||| ||| |||| ||||| | |||||||||||||||||||||||||||||||    
T  1432560 cttactttcataagttctccaagatagtttatgaaaacaatttatagcttata 1432508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 113
Target Start/End: Original strand, 4700079 - 4700143
Alignment:
Q  49 agttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttata 113  Q
    ||||||||| | |||||||| ||||  |||| |||||||||||| |||||| |||||||||||||    
T  4700079 agttgttttcagcttattttcataagctctccaggatagtttataaaaacagtttatagcttata 4700143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 8780394 - 8780430
Alignment:
Q  6 ctgtttgagagagcttatgaaaacaacttatgacatg 42  Q
    |||||||||||||||||| ||||||||||||||||||    
T  8780394 ctgtttgagagagcttataaaaacaacttatgacatg 8780430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 15579585 - 15579533
Alignment:
Q  3 agactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtt 55  Q
    |||||||||| |||||||| || ||||||||||||||||| || |||||||||    
T  15579585 agactgtttgggagagcttgtggaaacaacttatgacatgtccataagttgtt 15579533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 114
Target Start/End: Original strand, 28689421 - 28689532
Alignment:
Q  5 actgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatag--tttatgaaaacaatt 102  Q
    ||||||| ||||| |||| | ||||| ||||||||||| || ||||||||||| | |||||||| ||||  | || | |||||  | ||||||||||| |    
T  28689421 actgttttagagaacttacggaaacagcttatgacatgtccataagttgttttcagcttattttcataagctttccaagatagcttatatgaaaacaact 28689520  T
Q  103 tatagcttatat 114  Q
    ||||||||||||    
T  28689521 tatagcttatat 28689532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 121
Target Start/End: Complemental strand, 30257756 - 30257668
Alignment:
Q  33 ttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttatattgaaaca 121  Q
    ||||||||||  | |||| |||||| | ||||||| |||||   ||| |||||||||||||||||||| ||| ||||||||| ||||||    
T  30257756 ttatgacatgttcataagctgttttcagcttatttctataagccctccaggatagtttatgaaaacaacttaaagcttatatggaaaca 30257668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 33108605 - 33108653
Alignment:
Q  19 cttatgaaaacaacttatgacatgaccgtaagttgttttaaacttattt 67  Q
    ||||||||||||||| ||| ||||||| ||||||||||| |||||||||    
T  33108605 cttatgaaaacaactcatgccatgaccataagttgttttcaacttattt 33108653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 113
Target Start/End: Original strand, 36151502 - 36151582
Alignment:
Q  33 ttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttata 113  Q
    |||||||||| || |||  |||||| |||||||||| ||||  || ||||||| ||||| |||||||||||||| ||||||    
T  36151502 ttatgacatgtccataacctgttttcaacttattttcataagctcactaggattgtttacgaaaacaatttataacttata 36151582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 38170655 - 38170711
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtttt 57  Q
    |||||||| ||| ||||||||||||||||| |||||||||||  | |||||||||||    
T  38170655 tgagactgcttgggagagcttatgaaaacagcttatgacatgttcataagttgtttt 38170711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 114
Target Start/End: Original strand, 39270403 - 39270503
Alignment:
Q  14 gagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttata 113  Q
    ||||||||||||||||| ||| || |||| || |||| |||||| |||||||||| |||   |||||| | ||| |||||||||||  ||||| ||||||    
T  39270403 gagagcttatgaaaacagcttttggcatgtccataagctgttttcaacttattttcatatgctctctatggtagcttatgaaaacagcttatatcttata 39270502  T
Q  114 t 114  Q
    |    
T  39270503 t 39270503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 4482031 - 4481968
Alignment:
Q  5 actgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttt 68  Q
    ||||||||||||| |||||||||||||||||| |||||  | |||| |||||| | ||||||||    
T  4482031 actgtttgagagaacttatgaaaacaacttattacatgttcataagctgtttttagcttatttt 4481968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 6279499 - 6279392
Alignment:
Q  6 ctgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttat 105  Q
    ||||||||||||||||||| |||||  | |  ||||| || ||||||||||| | | |||||  ||||  |||||||||||| ||||||||| | ||||     
T  6279499 ctgtttgagagagcttatggaaacagttaaccacatgtccataagttgttttcagcgtatttccataagctctctaggatagcttatgaaaatagtttaa 6279400  T
Q  106 agcttata 113  Q
    ||||||||    
T  6279399 agcttata 6279392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 99
Target Start/End: Complemental strand, 10744399 - 10744308
Alignment:
Q  8 gtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 99  Q
    ||||| |||| ||| |||||||| |||||| ||||  | |||| |||||| | ||||||||||||| ||||||| || || |||||||||||    
T  10744399 gtttgggagaacttgtgaaaacagcttatggcatgttcataagctgttttcatcttatttttataagttctctaagacagcttatgaaaaca 10744308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 11695966 - 11695855
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 100  Q
    ||||| |||||| || ||| |||| |||||  |||||||||| || |||| |||||| |||||||||| ||||  | || || ||||| ||| ||||||     
T  11695966 tgagattgtttgggaaagcatatggaaacagtttatgacatgtccataagctgttttcaacttattttcataagctttccagaatagtctataaaaacat 11695867  T
Q  101 tttatagcttat 112  Q
    ||||||||||||    
T  11695866 tttatagcttat 11695855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 35669075 - 35668963
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 100  Q
    |||||||||||||||   ||||||||| || ||||||| ||| || ||| ||||||| |||||||||  |||| || |  ||||||  |||||||||||     
T  35669075 tgagactgtttgagaa--cttatgaaagcagcttatgatatgtccataaattgttttcaacttatttccataaattttacaggataagttatgaaaacag 35668978  T
Q  101 tttatagcttatatt 115  Q
    ||||||| |||||||    
T  35668977 tttatagtttatatt 35668963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 43371856 - 43371891
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttat 36  Q
    |||||||||||||||||||||||||||||| |||||    
T  43371856 tgagactgtttgagagagcttatgaaaacagcttat 43371891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 2522698 - 2522636
Alignment:
Q  37 gacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 99  Q
    |||||| |||||| ||||||| |||||||||  |||| ||||| || ||||||||||||||||    
T  2522698 gacatgtccgtaatttgttttcaacttatttccataaattctccagaatagtttatgaaaaca 2522636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 4033982 - 4034020
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgac 39  Q
    ||||| |||||||||||||||||||||| ||||||||||    
T  4033982 tgagattgtttgagagagcttatgaaaataacttatgac 4034020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 4549506 - 4549616
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgt-aagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 99  Q
    |||||||||||| ||||||||||  ||||||||||||||||| |  | |||||||||| |||  ||||  ||||  |||| ||||| | |||||||||||    
T  4549506 tgagactgtttgggagagcttatagaaacaacttatgacatgtctataaagttgttttcaacaaatttcaataagctctccaggattgcttatgaaaaca 4549605  T
Q  100 atttatagctt 110  Q
      |||||||||    
T  4549606 tcttatagctt 4549616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 26779891 - 26779996
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 100  Q
    |||||||||||| ||||  || |||||||| ||||||||   ||  ||||||||||| |||||||||| |||| ||||  | ||||| ||||||||||||    
T  26779891 tgagactgtttgggagaatttctgaaaacaccttatgaccgtaca-taagttgttttcaacttattttcataagttcttcaagatagcttatgaaaacaa 26779989  T
Q  101 tttatag 107  Q
     ||||||    
T  26779990 cttatag 26779996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 45234289 - 45234247
Alignment:
Q  10 ttgagagagcttatgaaaacaacttatgacatgaccgtaagtt 52  Q
    ||||||||| ||||||||||||||||||||||| || ||||||    
T  45234289 ttgagagagtttatgaaaacaacttatgacatgcccttaagtt 45234247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 17269355 - 17269242
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 100  Q
    ||||| ||||||  || ||||||||||| | |||||||||||  | | ||||||||| ||||||||    |||  |||| ||||||| ||||||||||||    
T  17269355 tgagattgtttggtagtgcttatgaaaataccttatgacatgttcatgagttgtttttaacttattaccgtaagctctccaggatagcttatgaaaacaa 17269256  T
Q  101 tttatagcttatat 114  Q
     |||| ||||||||    
T  17269255 cttattgcttatat 17269242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 26946472 - 26946525
Alignment:
Q  61 cttatttttataacttctctaggatagtttatgaaaacaatttatagcttatat 114  Q
    |||||||| || ||||||||| ||||| |||||||||| | |||||||||||||    
T  26946472 cttattttcatgacttctctaagatagcttatgaaaacgacttatagcttatat 26946525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 100
Target Start/End: Original strand, 27963341 - 27963434
Alignment:
Q  7 tgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 100  Q
    ||||||||| |||||||   |||| ||||||||||| || ||||||||||| | ||||||| |||||  |||| |  |||| ||||||||||||    
T  27963341 tgtttgagaaagcttatattaacagcttatgacatgtccataagttgtttttagcttatttatataagctctccataatagcttatgaaaacaa 27963434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 34536263 - 34536222
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatg 42  Q
    |||||||||||||||  ||||||||||||| |||||||||||    
T  34536263 tgagactgtttgagatggcttatgaaaacagcttatgacatg 34536222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 37941955 - 37942004
Alignment:
Q  6 ctgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtt 55  Q
    ||||||||||||||||||  |||||| |||||||||| || |||||||||    
T  37941955 ctgtttgagagagcttatagaaacaatttatgacatgtccataagttgtt 37942004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 73
Target Start/End: Original strand, 43722308 - 43722365
Alignment:
Q  16 gagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataa 73  Q
    ||||||||||||| |||||||||||||  | || |||||||| | |||||||||||||    
T  43722308 gagcttatgaaaaaaacttatgacatgttcttatgttgttttcagcttatttttataa 43722365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 44422804 - 44422691
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 100  Q
    ||||||||| || ||||||||||||||| | ||||||||||| || |||| ||  |  | |||||||| ||||  |||| ||||||| |||| |||| |     
T  44422804 tgagactgtctgggagagcttatgaaaatagcttatgacatgtccataagctgactacagcttattttcataagctctccaggatagcttataaaaatag 44422705  T
Q  101 tttatagcttatat 114  Q
     |||||||||||||    
T  44422704 cttatagcttatat 44422691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 49521770 - 49521811
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatg 42  Q
    ||||| ||||||||||||||| || |||||||||||||||||    
T  49521770 tgagattgtttgagagagcttgtggaaacaacttatgacatg 49521811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 49692017 - 49692058
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatg 42  Q
    ||||||||||||||||| |||||||||| | |||||||||||    
T  49692017 tgagactgtttgagagaacttatgaaaatagcttatgacatg 49692058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 42
Target Start/End: Original strand, 7356504 - 7356544
Alignment:
Q  2 gagactgtttgagagagcttatgaaaacaacttatgacatg 42  Q
    |||| |||||||||||| |||| ||||||||||||||||||    
T  7356504 gagattgtttgagagagtttataaaaacaacttatgacatg 7356544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 15558276 - 15558224
Alignment:
Q  47 taagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 99  Q
    ||||||||||| | ||||||| ||||| ||||||||||||  |||||||||||    
T  15558276 taagttgttttcagcttatttctataagttctctaggatatcttatgaaaaca 15558224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 16980908 - 16980868
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacat 41  Q
    ||||||| |||||||||||||||| |||||||||| |||||    
T  16980908 tgagactatttgagagagcttatggaaacaacttacgacat 16980868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 24153380 - 24153320
Alignment:
Q  7 tgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttattt 67  Q
    |||||| ||||||||||  ||||||||||||||||  || | ||||||||| |||||||||    
T  24153380 tgtttgtgagagcttatagaaacaacttatgacatatccatgagttgtttttaacttattt 24153320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 29929590 - 29929642
Alignment:
Q  5 actgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtttt 57  Q
    |||||||  |||||||||||||||||||| ||||||||  | |||||||||||    
T  29929590 actgttttggagagcttatgaaaacaactcatgacatgtgcataagttgtttt 29929642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 121
Target Start/End: Original strand, 34179917 - 34179957
Alignment:
Q  81 aggatagtttatgaaaacaatttatagcttatattgaaaca 121  Q
    ||||||||||||||||||| ||||||||||| ||| |||||    
T  34179917 aggatagtttatgaaaacagtttatagcttagattaaaaca 34179957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 38001701 - 38001645
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtttt 57  Q
    |||||||||||| |||| |||||||||||| |||||||| ||  | |||||||||||    
T  38001701 tgagactgtttgggagaacttatgaaaacagcttatgacctgttcataagttgtttt 38001645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 61 - 113
Target Start/End: Complemental strand, 49888812 - 49888760
Alignment:
Q  61 cttatttttataacttctctaggatagtttatgaaaacaatttatagcttata 113  Q
    |||||||| |||| ||||||| ||||| |||||||||||| | ||||||||||    
T  49888812 cttattttcataagttctctaagatagcttatgaaaacaactaatagcttata 49888760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 4e-17; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 114
Target Start/End: Complemental strand, 30389200 - 30389091
Alignment:
Q  5 actgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaattta 104  Q
    ||||||||||||||| |||||||| | || ||||||||  | ||||||||||| | |||||||| |||| |||||||||| || |||||||||||   ||    
T  30389200 actgtttgagagagcatatgaaaatagctaatgacatgttcataagttgttttcagcttattttcataagttctctaggaaagcttatgaaaacagcgta 30389101  T
Q  105 tagcttatat 114  Q
    ||||||||||    
T  30389100 tagcttatat 30389091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 39551178 - 39551283
Alignment:
Q  5 actgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaattta 104  Q
    |||||||| ||||  ||||| ||||||||||||||||| ||  ||| |||||| |||||||||||||||  |||| |||| || |||||||||||| |||    
T  39551178 actgtttgggagaatttatggaaacaacttatgacatgtccaaaagctgtttttaacttatttttataagctctccaggaaagcttatgaaaacaactta 39551277  T
Q  105 tagctt 110  Q
    ||||||    
T  39551278 tagctt 39551283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 8629561 - 8629489
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataa 73  Q
    |||||| |||||||||| ||||||||||||||||||||||||| | ||||||||||| ||||| | |||||||    
T  8629561 tgagaccgtttgagagaacttatgaaaacaacttatgacatgatcataagttgttttcaacttctatttataa 8629489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 14949971 - 14949875
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaa 97  Q
    |||||||||||  ||||||||||||||| ||||||||||||| || |||| |||||| | ||||||| |||||  ||| |||||||| |||||||||    
T  14949971 tgagactgtttaggagagcttatgaaaataacttatgacatgtccataagctgttttcagcttatttctataatctctttaggatagcttatgaaaa 14949875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 11569422 - 11569520
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 99  Q
    ||||||||||| |||||||||||| ||||| |||||||||||  | ||||||||||| | |||||||| | ||  |||| | ||||| |||||||||||    
T  11569422 tgagactgtttaagagagcttatggaaacagcttatgacatgtacataagttgttttcagcttattttcaaaatctctccatgatagcttatgaaaaca 11569520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 100
Target Start/End: Original strand, 26473730 - 26473816
Alignment:
Q  14 gagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 100  Q
    ||||||||||||||||| ||||||||||| |  |||| |  ||| |||||||||| ||||  |||||||||||| ||||||||||||    
T  26473730 gagagcttatgaaaacagcttatgacatgtctataagctagttttaacttattttcataagctctctaggatagcttatgaaaacaa 26473816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 779027 - 779132
Alignment:
Q  2 gagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaat 101  Q
    |||| ||||||| ||| |||| |||||||||||||||||||  | ||||||||||| | ||||||||  ||   |||| | ||||||||||||||||| |    
T  779027 gagattgtttgaaagaacttacgaaaacaacttatgacatgttcataagttgttttcatcttattttggtacactctccaagatagtttatgaaaacagt 779126  T
Q  102 ttatag 107  Q
    ||||||    
T  779127 ttatag 779132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 2091868 - 2091746
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttata---acttctctaggatagtttatgaaaa 97  Q
    ||||| |||||||||||||| |  |||||||||||||| ||  || ||||||||||| ||||||||| ||||    |||| | ||||||| |||||||||    
T  2091868 tgagattgtttgagagagctcacaaaaacaacttatgatatatccataagttgttttcaacttatttctatatgctcttcac-aggatagcttatgaaaa 2091770  T
Q  98 caatttatagcttatattgaaaca 121  Q
    ||| || ||||||||||| |||||    
T  2091769 caacttgtagcttatattaaaaca 2091746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 30918217 - 30918177
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacat 41  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  30918217 tgagactgtttgagagagcttatgaaaacaacttgtgacat 30918177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 100
Target Start/End: Original strand, 7918412 - 7918510
Alignment:
Q  2 gagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 100  Q
    ||||||||||| |||||||||||||||||||||| ||||||  | |||| |||||  |||||||||  ||||  |||| | ||||| ||| ||||||||    
T  7918412 gagactgtttgggagagcttatgaaaacaacttaagacatgttcataagctgtttccaacttatttcaataagctctccaagatagcttacgaaaacaa 7918510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 97
Target Start/End: Original strand, 9540967 - 9541057
Alignment:
Q  7 tgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaa 97  Q
    |||||| ||||||||||| ||||| ||||||||||| || ||| |||| || | |||||||| | ||  |||||||||||| |||||||||    
T  9540967 tgtttgggagagcttatggaaacatcttatgacatgtccataatttgtgttcagcttattttcaaaagctctctaggatagcttatgaaaa 9541057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 11770978 - 11771048
Alignment:
Q  3 agactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataa 73  Q
    ||||||||| | ||| |||||||||||||||||||| ||| |  || |||||||| |||||||||||||||    
T  11770978 agactgtttaaaagaacttatgaaaacaacttatgatatgtctatacgttgttttcaacttatttttataa 11771048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 30987956 - 30987997
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatg 42  Q
    |||| ||||||||||||||||||| |||||||||||||||||    
T  30987956 tgagtctgtttgagagagcttatggaaacaacttatgacatg 30987997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 40071854 - 40071741
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 100  Q
    ||||| |||||| ||||||||||| |||||||||||||||||  | |||   | ||| |||| ||||| ||||  | |||||||||| || ||||||||     
T  40071854 tgagagtgtttgggagagcttatggaaacaacttatgacatgttcataatcagctttcaactaattttcataagctttctaggatagcttctgaaaacag 40071755  T
Q  101 tttatagcttatat 114  Q
    |||||||| |||||    
T  40071754 tttatagcatatat 40071741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 114
Target Start/End: Original strand, 6509273 - 6509381
Alignment:
Q  6 ctgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttat 105  Q
    ||||||||||||||||||  ||||| ||||||||||| |  |||  | |||| | |||||||  ||||  |||| ||||||| |||||||||||  ||||    
T  6509273 ctgtttgagagagcttatagaaacagcttatgacatgcctataaactattttcaccttatttcaataagctctccaggatagcttatgaaaacagcttat 6509372  T
Q  106 agcttatat 114  Q
    |||||||||    
T  6509373 agcttatat 6509381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 9572975 - 9572919
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtttt 57  Q
    |||||||||||| |||| |||| ||||| ||||||||||||| || |||||||||||    
T  9572975 tgagactgtttgtgagaacttacgaaaataacttatgacatgtccataagttgtttt 9572919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 9700106 - 9700034
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataa 73  Q
    ||||||| ||||||||||||| ||||| ||| |||||||||| || |||| |||||| | |||||||| ||||    
T  9700106 tgagactatttgagagagcttgtgaaatcaatttatgacatgtccataagctgttttcaccttattttcataa 9700034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 12851279 - 12851171
Alignment:
Q  3 agactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatt 102  Q
    |||||||||| || | |||||||||||| ||||| |||||  | |||| ||||||   |||||||| ||||  |||| |||| || ||||||||||||||    
T  12851279 agactgtttgggaaaacttatgaaaacagcttataacatgttcataagatgttttcggcttattttcataagctctcaaggaaagcttatgaaaacaatt 12851180  T
Q  103 tatagctta 111  Q
    | |||||||    
T  12851179 tctagctta 12851171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 31875564 - 31875632
Alignment:
Q  5 actgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataa 73  Q
    ||||||||||| |||||||| ||||||||||||||||| || ||||   |||| |||||||||| ||||    
T  31875564 actgtttgagaaagcttatggaaacaacttatgacatgtccataagccattttcaacttattttcataa 31875632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 7918746 - 7918781
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttat 36  Q
    |||||||||||| |||||||||||||||||||||||    
T  7918746 tgagactgtttgggagagcttatgaaaacaacttat 7918781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 30191108 - 30191147
Alignment:
Q  3 agactgtttgagagagcttatgaaaacaacttatgacatg 42  Q
    |||||||||| ||||||||||| |||||||||||||||||    
T  30191108 agactgtttgggagagcttatggaaacaacttatgacatg 30191147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 32840951 - 32840990
Alignment:
Q  2 gagactgtttgagagagcttatgaaaacaacttatgacat 41  Q
    ||||||||||| |||| |||||||||||||||||||||||    
T  32840951 gagactgtttgggagaacttatgaaaacaacttatgacat 32840990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 6950427 - 6950361
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttattt 67  Q
    ||||| |||||| ||||||||||| ||||||| ||||||||| |  ||||||||||| | |||||||    
T  6950427 tgagattgtttgggagagcttatgtaaacaacctatgacatgtcgataagttgttttcagcttattt 6950361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 8060770 - 8060676
Alignment:
Q  5 actgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 99  Q
    ||||||||||||||||||||||||||| |||||  | |  | |||||| |||| | |||||||  ||||  |||||||||| | |||||||||||    
T  8060770 actgtttgagagagcttatgaaaacaaattatggaaagttcataagttattttcagcttatttccataagctctctaggattgcttatgaaaaca 8060676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 113
Target Start/End: Complemental strand, 31862595 - 31862486
Alignment:
Q  3 agactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatt 102  Q
    |||||||||||||||| ||| | || ||||||||||| |   | |||| |||||| | |||||||| ||||  |||||||||||  |||||||||||  |    
T  31862595 agactgtttgagagag-ttacggaagcaacttatgacctatgcataagctgttttcagcttattttcataagctctctaggataacttatgaaaacatct 31862497  T
Q  103 tatagcttata 113  Q
    |||||||||||    
T  31862496 tatagcttata 31862486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 2487973 - 2488014
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatg 42  Q
    |||||||||||| |||| |||||||||||||||||| |||||    
T  2487973 tgagactgtttgggagaacttatgaaaacaacttataacatg 2488014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 4251061 - 4251020
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatg 42  Q
    |||||||||||||||||| ||||||||||  |||||||||||    
T  4251061 tgagactgtttgagagagtttatgaaaactgcttatgacatg 4251020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 10120859 - 10120822
Alignment:
Q  4 gactgtttgagagagcttatgaaaacaacttatgacat 41  Q
    |||||||||||||| |||||||||||| ||||||||||    
T  10120859 gactgtttgagagaacttatgaaaacagcttatgacat 10120822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 26371067 - 26371014
Alignment:
Q  4 gactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgtttt 57  Q
    |||||||||||||| |||||| |||| ||||||||||||  ||| |||||||||    
T  26371067 gactgtttgagagatcttatggaaactacttatgacatgtgcgtcagttgtttt 26371014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 38
Target Start/End: Original strand, 27412855 - 27412884
Alignment:
Q  9 tttgagagagcttatgaaaacaacttatga 38  Q
    ||||||||||||||||||||||||||||||    
T  27412855 tttgagagagcttatgaaaacaacttatga 27412884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 35220702 - 35220791
Alignment:
Q  15 agagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaattta 104  Q
    |||| |||||||||||  |||||||||| || |||| | |||| | |||||||||||||  |||| || |||| ||||||||||| ||||    
T  35220702 agagtttatgaaaacagtttatgacatgcccataagctatttttagcttatttttataagctctccagaatagcttatgaaaacagttta 35220791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 41442418 - 41442459
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatg 42  Q
    ||||||||||||| ||| ||||||||||||| ||||||||||    
T  41442418 tgagactgtttgacagaacttatgaaaacaatttatgacatg 41442459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 11056631 - 11056667
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatg 37  Q
    ||||| |||||||||||| ||||||||||||||||||    
T  11056631 tgagattgtttgagagagtttatgaaaacaacttatg 11056667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 42
Target Start/End: Complemental strand, 45071466 - 45071438
Alignment:
Q  14 gagagcttatgaaaacaacttatgacatg 42  Q
    |||||||||||||||||||||||||||||    
T  45071466 gagagcttatgaaaacaacttatgacatg 45071438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 4 - 113
Target Start/End: Original strand, 10272399 - 10272508
Alignment:
Q  4 gactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaattt 103  Q
    |||| |||| ||| ||||||  ||||||||||||||||| | |||||||||||| | |||||||| ||||  |||| | ||| | |||||||||||| ||    
T  10272399 gactatttgggagtgcttatagaaacaacttatgacatgtctgtaagttgttttcagcttattttcataaactctccaagatggcttatgaaaacaactt 10272498  T
Q  104 atagcttata 113  Q
    ||||||||||    
T  10272499 atagcttata 10272508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 121
Target Start/End: Complemental strand, 4619808 - 4619692
Alignment:
Q  5 actgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaattta 104  Q
    |||||||| |||||||||||||||||||| ||||||||  | |||| || ||| | |||||||  |||| ||||| | ||||| ||||||| ||| ||||    
T  4619808 actgtttgggagagcttatgaaaacaactaatgacatgttcataagctggtttcaccttatttccataagttctccatgatagcttatgaagacagttta 4619709  T
Q  105 tagcttatattgaaaca 121  Q
    ||| |||||| ||||||    
T  4619708 tagattatatagaaaca 4619692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 99
Target Start/End: Original strand, 41957430 - 41957514
Alignment:
Q  15 agagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaaca 99  Q
    |||||||| | ||||| ||||||||||| || ||||||||||| | |||||||| |||| ||||| ||||||| |||||||||||    
T  41957430 agagcttacggaaacagcttatgacatgtccataagttgttttcatcttattttcataagttctcaaggatagcttatgaaaaca 41957514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 37611180 - 37611282
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 100  Q
    ||||| |||||||||||||||||||||||||||| |||||||  | |||| |||||| |  ||||||  ||||  |||| | ||||| ||||||||||||    
T  37611180 tgagattgtttgagagagcttatgaaaacaacttgtgacatgttcataagctgttttcaggttatttccataagctctccaagatagcttatgaaaacaa 37611279  T
Q  101 ttt 103  Q
    |||    
T  37611280 ttt 37611282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 37787910 - 37788012
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 100  Q
    ||||| |||||||||||||||||||||||||||| |||||||  | |||| |||||| |  ||||||  ||||  |||| | ||||| ||||||||||||    
T  37787910 tgagattgtttgagagagcttatgaaaacaacttgtgacatgttcataagctgttttcaggttatttccataagctctccaagatagcttatgaaaacaa 37788009  T
Q  101 ttt 103  Q
    |||    
T  37788010 ttt 37788012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 73
Target Start/End: Original strand, 13604825 - 13604886
Alignment:
Q  12 gagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataa 73  Q
    ||||||||||||||||||| ||||||||||| || || |||||||| |||||||||| ||||    
T  13604825 gagagagcttatgaaaacagcttatgacatgtccatacgttgttttcaacttattttcataa 13604886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 14295611 - 14295498
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 100  Q
    ||||||||| |||||||||||||||||||| ||||||| ||| |  |||| |||||| | |||| || || ||  |||| ||||||| ||| |||||||     
T  14295611 tgagactgtctgagagagcttatgaaaacagcttatgatatgtcgataagctgttttcagcttacttctaaaagctctccaggatagcttacgaaaacag 14295512  T
Q  101 tttatagcttatat 114  Q
     |||||||||||||    
T  14295511 cttatagcttatat 14295498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 37526164 - 37526277
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 100  Q
    |||||||||||||||||||||||||| ||||| |||||||||    |||| |||||| | |||||||  ||||  |||| || | |  ||||||||||||    
T  37526164 tgagactgtttgagagagcttatgaatacaacctatgacatgttaataagctgttttcagcttatttccataagctctccagaacaacttatgaaaacaa 37526263  T
Q  101 tttatagcttatat 114  Q
     |||||||||||||    
T  37526264 cttatagcttatat 37526277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 37588325 - 37588438
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 100  Q
    |||||||||||||||||||||||||| ||||| ||||| |||    |||| |||||| | |||||||  ||||  |||| || |||  ||||||||||||    
T  37588325 tgagactgtttgagagagcttatgaatacaacctatgaaatgttaataagctgttttcagcttatttccataagctctccagaataacttatgaaaacaa 37588424  T
Q  101 tttatagcttatat 114  Q
     |||||||||||||    
T  37588425 cttatagcttatat 37588438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 17 - 113
Target Start/End: Original strand, 37794679 - 37794774
Alignment:
Q  17 agcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttata 113  Q
    ||||||||||||||||||||||||||  | |||| |||||| | |||||||  ||||| ||| |||||||| | ||||||| ||| |||||||||||    
T  37794679 agcttatgaaaacaacttatgacatgttcataagctgttttgagcttatttcgataac-tctataggatagctcatgaaaataatctatagcttata 37794774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 113
Target Start/End: Complemental strand, 15246933 - 15246826
Alignment:
Q  7 tgtttgagagagcttatgaaaacaacttatgacatgac-cgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttat 105  Q
    |||||| |||| ||||||||| ||||||||||||| |  | |||||| |||  ||||||||||||| | ||||||| ||||| |||||||||||  | ||    
T  15246933 tgtttgggagaacttatgaaagcaacttatgacatcattcataagttttttgcaacttatttttatcatttctctaagatagcttatgaaaacagctcat 15246834  T
Q  106 agcttata 113  Q
    ||||||||    
T  15246833 agcttata 15246826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 29363100 - 29363057
Alignment:
Q  14 gagagcttatgaaaacaacttatgacatgaccgtaagttgtttt 57  Q
    ||||||||||||||||||||||||||||| || |||||||||||    
T  29363100 gagagcttatgaaaacaacttatgacatgcccataagttgtttt 29363057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 12242683 - 12242777
Alignment:
Q  9 tttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaattt 103  Q
    |||||||||||||||| ||| |||||||||||||| | | ||||||||| | |||| ||  ||||  |||| | ||||| |||||||||||||||    
T  12242683 tttgagagagcttatggaaaaaacttatgacatgaacattagttgttttcagcttacttccataagctctccaagatagcttatgaaaacaattt 12242777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 37690601 - 37690715
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggat-agtttatgaaaaca 99  Q
    |||||||||||||||||||||||||| ||||| |||||||||    |||| |||||| | |||||||  ||||  |||| |  || | ||||||||||||    
T  37690601 tgagactgtttgagagagcttatgaatacaacctatgacatgttaataagctgttttcagcttatttccataagctctccataataactttatgaaaaca 37690700  T
Q  100 atttatagcttatat 114  Q
    | |||||||||||||    
T  37690701 acttatagcttatat 37690715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 181
Target Start/End: Complemental strand, 35960516 - 35960338
Alignment:
Q  3 agactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatt 102  Q
    ||||| |||||||||||||||| || ||||||| |||||| || |||| |||||| | ||||||| | ||   | || ||||||| |||||||| ||| |    
T  35960516 agactatttgagagagcttatggaagcaacttacgacatgtccataagatgtttttagcttatttctttacgctttccaggatagcttatgaaatcaact 35960417  T
Q  103 tatagcttatattgaaaca--ctgactttatttttatatttcattatggaaatagcttatgagtaagtacttaaatgataa 181  Q
    ||||| ||||| ||||| |   |||||||| |||||| ||| ||||| ||||||| |||||  ||| |||||| |||||||    
T  35960416 tatagtttata-tgaaatagtttgacttta-ttttatcttttattatagaaatagtttatgcataaatacttatatgataa 35960338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 7674753 - 7674641
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 100  Q
    |||||||| |||  ||| |||||| |||||||||||||||||    |||| |||||| | |||||||| | || ||||| | ||||| |||||||||||     
T  7674753 tgagactgcttggaagaacttatggaaacaacttatgacatgtttataaggtgttttcagcttattttcacaaattctccaagatagcttatgaaaacat 7674654  T
Q  101 tttatagcttata 113  Q
    ||||| |||||||    
T  7674653 tttatggcttata 7674641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 8090040 - 8090004
Alignment:
Q  2 gagactgtttgagagagcttatgaaaacaacttatga 38  Q
    |||||| ||||||||||||||||||||||||||||||    
T  8090040 gagactatttgagagagcttatgaaaacaacttatga 8090004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 10391447 - 10391333
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttattt--ttataacttctctaggatagtttatgaaaac 98  Q
    ||||| ||||||  |||| |||| ||||||  |||||||||| |  | ||||||||| |||||||||  ||| |||| ||||||||||| |||| |||||    
T  10391447 tgagattgtttggaagagtttataaaaacactttatgacatgtctattagttgttttcaacttatttccttaaaact-ctctaggatagcttataaaaac 10391349  T
Q  99 aatttatagcttatat 114  Q
    || |||||||||||||    
T  10391348 aaattatagcttatat 10391333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 114
Target Start/End: Original strand, 15003504 - 15003592
Alignment:
Q  26 aaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttatat 114  Q
    |||||||||| ||||||  |||||||||||||  | ||||||  ||||  ||||| |||||| |||||||||| | |||||||||||||    
T  15003504 aaacaacttacgacatgttcgtaagttgttttcgatttatttccataagctctcttggatagcttatgaaaaccacttatagcttatat 15003592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 2 - 113
Target Start/End: Complemental strand, 2568762 - 2568651
Alignment:
Q  2 gagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaat 101  Q
    ||||||||||   ||| |||||||||||| ||||||||||   | |||||| |||| | |||||||| || |  |||| | ||||| ||||||||||||     
T  2568762 gagactgtttagaagaacttatgaaaacagcttatgacatattcataagttatttttagcttattttcattagctctccatgatagcttatgaaaacaac 2568663  T
Q  102 ttatagcttata 113  Q
    ||||||||||||    
T  2568662 ttatagcttata 2568651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 47 - 114
Target Start/End: Complemental strand, 7319465 - 7319398
Alignment:
Q  47 taagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttatat 114  Q
    ||||||| ||| | ||||||||||||| ||||| | ||||| ||| ||||||| ||||||||||||||    
T  7319465 taagttgctttcagcttatttttataagttctccaagatagcttacgaaaacagtttatagcttatat 7319398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 10152439 - 10152388
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagtt 52  Q
    ||||||| |||  ||||||||||||||||||||||||||||| || ||||||    
T  10152439 tgagactattttggagagcttatgaaaacaacttatgacatgtccataagtt 10152388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 12 - 107
Target Start/End: Complemental strand, 17368770 - 17368675
Alignment:
Q  12 gagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatag 107  Q
    |||||| ||||||||||||||||||||||||  | || |  ||||| | |||||||  ||||| |||| | ||||| |||||||||||| ||||||    
T  17368770 gagagaacttatgaaaacaacttatgacatgttcatatgcagttttcagcttatttccataacctctccaagatagcttatgaaaacaacttatag 17368675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 113
Target Start/End: Complemental strand, 12425630 - 12425564
Alignment:
Q  47 taagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttata 113  Q
    ||||||||||| |||||||||| |||| ||||| | ||||| || ||||||||  ||||||||||||    
T  12425630 taagttgttttcaacttattttcataagttctccaagatagcttgtgaaaacagcttatagcttata 12425564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 14980613 - 14980559
Alignment:
Q  2 gagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttt 56  Q
    |||||||||||||||||||||| ||||  ||||||||||||  | ||||||||||    
T  14980613 gagactgtttgagagagcttataaaaatgacttatgacatgtacataagttgttt 14980559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 28586735 - 28586817
Alignment:
Q  5 actgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatag 87  Q
    |||||||| ||||||||||| ||| | ||||||||||  ||||||| |||||| | |||||||  ||||  ||||||||||||    
T  28586735 actgtttgggagagcttatggaaatagcttatgacatatccgtaagctgttttcagcttatttcgataagctctctaggatag 28586817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 29590594 - 29590660
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttattt 67  Q
    ||||||||||||||  |||||||| | | |||||||||| || || ||||||||||| |||||||||    
T  29590594 tgagactgtttgagttagcttatggacaaaacttatgacttgtccataagttgttttcaacttattt 29590660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 38047847 - 38047885
Alignment:
Q  4 gactgtttgagagagcttatgaaaacaacttatgacatg 42  Q
    ||||||||| ||||||||||| |||||||||||||||||    
T  38047847 gactgtttgggagagcttatggaaacaacttatgacatg 38047885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 5531124 - 5531083
Alignment:
Q  16 gagcttatgaaaacaacttatgacatgaccgtaagttgtttt 57  Q
    ||||||||||||||||||||||| ||| || |||||||||||    
T  5531124 gagcttatgaaaacaacttatgatatgtccataagttgtttt 5531083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 10907483 - 10907442
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatg 42  Q
    ||||||||||||  ||||||||||||||||||||||| ||||    
T  10907483 tgagactgtttggaagagcttatgaaaacaacttatgtcatg 10907442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 12459966 - 12460007
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatg 42  Q
    |||||||||||| |||| | ||||||||||||||||||||||    
T  12459966 tgagactgtttgggagaacctatgaaaacaacttatgacatg 12460007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 30269711 - 30269764
Alignment:
Q  14 gagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttattt 67  Q
    |||||||||| |||||||||||| ||||| || ||||||||||| | |||||||    
T  30269711 gagagcttattaaaacaacttataacatgcccataagttgtttttagcttattt 30269764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 73
Target Start/End: Original strand, 2092518 - 2092582
Alignment:
Q  9 tttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataa 73  Q
    |||| ||||||||||  |||||||||||| |||| || ||||||||||| ||||| |||| ||||    
T  2092518 tttgggagagcttattgaaacaacttatggcatgtccataagttgttttcaactttttttcataa 2092582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 15402807 - 15402903
Alignment:
Q  14 gagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagctt 110  Q
    |||| |||| |||||||| |||||| |||  | ||||||||||| | || |||| ||||  |||||||  |||| |||||||||||| |||||||||    
T  15402807 gagaacttacgaaaacaaattatgatatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatagctt 15402903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 114
Target Start/End: Complemental strand, 19369405 - 19369305
Alignment:
Q  14 gagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagcttata 113  Q
    ||||||||||| || || || |||||||| | ||||| |||||| || |||||| |||||  ||||| ||| ||||||||||| ||  |||||| |||||    
T  19369405 gagagcttatggaagcagctcatgacatgtctgtaagctgttttcaatttatttctataagctctctgggaaagtttatgaaaccagcttatagtttata 19369306  T
Q  114 t 114  Q
    |    
T  19369305 t 19369305  T

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Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 21768173 - 21768229
Alignment:
Q  12 gagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttt 68  Q
    ||||| ||||||||||||| ||||||||||| || || | |||||| ||||||||||    
T  21768173 gagagtgcttatgaaaacagcttatgacatgtccatacgctgttttcaacttatttt 21768229  T

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Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 29336735 - 29336699
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatg 37  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  29336735 tgagactgattgagagagcttatggaaacaacttatg 29336699  T

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Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 36542256 - 36542360
Alignment:
Q  10 ttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaatttatagct 109  Q
    ||||||||  ||||| ||||| ||||||||||| ||  ||| |||||| |||||||||  | ||  |||||||||||| ||||| || ||  ||||||||    
T  36542256 ttgagagattttatggaaacatcttatgacatgtccagaagctgtttttaacttatttccacaagctctctaggatagcttatggaatcagcttatagct 36542355  T
Q  110 tatat 114  Q
    |||||    
T  36542356 tatat 36542360  T

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Target: scaffold0311 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 10582 - 10648
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttattt 67  Q
    ||||||||||||| | |||||||| |||||||| |||||||| || ||||||||||| | |||||||    
T  10582 tgagactgtttgacaaagcttatgtaaacaactaatgacatgtccataagttgttttcagcttattt 10648  T

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Target: scaffold0608 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 9606 - 9669
Alignment:
Q  5 actgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttt 68  Q
    ||||||||||||| |||||||||||||||||| |||||  | |||| |||||| | ||||||||    
T  9606 actgtttgagagaacttatgaaaacaacttattacatgttcataagctgtttttagcttatttt 9669  T

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Target: scaffold0003 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 306431 - 306332
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttatttttataacttctctaggatagtttatgaaaacaa 100  Q
    ||||||| || ||| | ||||||| ||||| ||||||||||| || |||| |||||| | |||| ||  ||||  |||||||||||| ||||||||||||    
T  306431 tgagactcttcgagtgcgcttatggaaacagcttatgacatgcccataagctgttttcagcttacttacataagctctctaggatagcttatgaaaacaa 306332  T

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Target: scaffold0024 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 27681 - 27615
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacatgaccgtaagttgttttaaacttattt 67  Q
    |||||||||||| ||||||||||| ||| | ||||||||||| |  ||||||||||| | |||||||    
T  27681 tgagactgtttgggagagcttatggaaatagcttatgacatggctataagttgttttcagcttattt 27615  T

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Target: scaffold0459 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 6651 - 6611
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacat 41  Q
    |||||| ||||||||||| |||||||||||| |||||||||    
T  6651 tgagacagtttgagagagattatgaaaacaagttatgacat 6611  T

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Target: scaffold0366 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 6649 - 6609
Alignment:
Q  1 tgagactgtttgagagagcttatgaaaacaacttatgacat 41  Q
    |||||| ||||||||||| |||||||||||| |||||||||    
T  6649 tgagacagtttgagagagattatgaaaacaagttatgacat 6609  T

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