View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10273_high_48 (Length: 252)
Name: NF10273_high_48
Description: NF10273
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10273_high_48 |
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Alignment Details
Target: chr5 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 7 - 186
Target Start/End: Original strand, 9283100 - 9283279
Alignment:
| Q |
7 |
gcacgttggaaaagccatcaaatttaaggtggactccaatttatttctcatgttctaaaatctaagtttccttatctataatagttatcgaactacagtt |
106 |
Q |
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| T |
9283100 |
gcacattggaaaagccatcaaatttaaggtgggctcaaatttatttctcatgttctaaaatctaagtttccttatctagaatagttatcgaactacaatt |
9283199 |
T |
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| Q |
107 |
agaaccttgcgaagtcatattgtcctggctgttcatttgtctaaacttatgcaaattgttacaagtttaatcttttttgt |
186 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9283200 |
agaaccttgcgaagtcatattgtcctggctaatcatttgtctaaacttatgcaaattgttacaagtttaatcttttttgt |
9283279 |
T |
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