View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10273_high_49 (Length: 250)

Name: NF10273_high_49
Description: NF10273
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10273_high_49
NF10273_high_49
[»] chr2 (37 HSPs)
chr2 (1-239)||(24776357-24776591)
chr2 (1-239)||(12407382-12407617)
chr2 (1-239)||(20605238-20605473)
chr2 (1-239)||(31170597-31170832)
chr2 (1-238)||(16269693-16269927)
chr2 (1-239)||(14198550-14198785)
chr2 (1-239)||(35317064-35317299)
chr2 (1-239)||(43847648-43847883)
chr2 (1-238)||(305439-305673)
chr2 (1-244)||(5093014-5093255)
chr2 (1-239)||(22551736-22551971)
chr2 (80-239)||(32125330-32125491)
chr2 (78-239)||(9120201-9120363)
chr2 (1-239)||(44765777-44766003)
chr2 (1-239)||(1789444-1789681)
chr2 (81-216)||(28844633-28844768)
chr2 (81-216)||(33135701-33135835)
chr2 (81-216)||(26788864-26788996)
chr2 (81-216)||(10657484-10657619)
chr2 (81-216)||(18177345-18177480)
chr2 (81-216)||(25288237-25288372)
chr2 (95-216)||(43078655-43078776)
chr2 (85-239)||(10125275-10125418)
chr2 (82-216)||(13833429-13833553)
chr2 (81-239)||(26601186-26601332)
chr2 (81-216)||(28740290-28740415)
chr2 (81-216)||(3463750-3463875)
chr2 (82-216)||(379016-379140)
chr2 (81-145)||(7026682-7026746)
chr2 (147-216)||(6224564-6224633)
chr2 (147-216)||(215235-215303)
chr2 (85-134)||(3574929-3574978)
chr2 (1-59)||(32125252-32125310)
chr2 (172-216)||(7027056-7027100)
chr2 (81-125)||(21370638-21370682)
chr2 (1-56)||(20605154-20605209)
chr2 (81-134)||(6224626-6224679)
[»] chr7 (64 HSPs)
chr7 (1-239)||(47914268-47914503)
chr7 (1-239)||(47879170-47879405)
chr7 (1-239)||(40996619-40996854)
chr7 (1-239)||(43581060-43581295)
chr7 (1-239)||(973186-973421)
chr7 (1-239)||(30440798-30441033)
chr7 (34-239)||(34695308-34695510)
chr7 (34-239)||(7718333-7718534)
chr7 (34-239)||(18914705-18914907)
chr7 (34-239)||(7719230-7719432)
chr7 (1-239)||(44343366-44343601)
chr7 (81-239)||(32142887-32143046)
chr7 (1-239)||(12893410-12893647)
chr7 (1-239)||(34009014-34009250)
chr7 (34-239)||(39219347-39219548)
chr7 (1-239)||(20275233-20275468)
chr7 (81-239)||(10068538-10068695)
chr7 (80-239)||(7113529-7113689)
chr7 (81-216)||(23101369-23101504)
chr7 (81-216)||(28342418-28342553)
chr7 (80-181)||(43679491-43679592)
chr7 (81-216)||(3022997-3023132)
chr7 (81-216)||(39784170-39784305)
chr7 (81-239)||(12963772-12963924)
chr7 (82-236)||(43187332-43187485)
chr7 (81-216)||(18838460-18838595)
chr7 (85-216)||(29614758-29614889)
chr7 (82-239)||(33382709-33382864)
chr7 (81-216)||(28034799-28034934)
chr7 (82-216)||(7993214-7993348)
chr7 (81-216)||(8675404-8675539)
chr7 (81-216)||(9882231-9882365)
chr7 (81-215)||(12740444-12740577)
chr7 (96-216)||(41827390-41827510)
chr7 (96-216)||(37972861-37972981)
chr7 (81-229)||(3797049-3797186)
chr7 (136-216)||(9179996-9180076)
chr7 (81-239)||(1470206-1470362)
chr7 (136-216)||(19810915-19810995)
chr7 (78-192)||(727588-727692)
chr7 (81-180)||(25805763-25805862)
chr7 (81-216)||(44256760-44256895)
chr7 (34-143)||(31638910-31639015)
chr7 (81-216)||(509727-509852)
chr7 (81-216)||(40460711-40460836)
chr7 (81-216)||(44121904-44122029)
chr7 (82-216)||(29585586-29585710)
chr7 (81-204)||(19251610-19251723)
chr7 (84-167)||(10676463-10676546)
chr7 (81-176)||(32883853-32883948)
chr7 (116-239)||(10617024-10617147)
chr7 (81-216)||(46405435-46405560)
chr7 (184-239)||(31639031-31639087)
chr7 (81-216)||(37327998-37328123)
chr7 (147-217)||(17001036-17001106)
chr7 (139-201)||(44623295-44623357)
chr7 (81-134)||(17001099-17001152)
chr7 (81-134)||(47066775-47066828)
chr7 (81-206)||(33892264-33892379)
chr7 (85-145)||(39028172-39028232)
chr7 (136-216)||(39028213-39028293)
chr7 (81-140)||(447854-447913)
chr7 (147-204)||(47066821-47066878)
chr7 (184-236)||(43863478-43863530)
[»] chr6 (24 HSPs)
chr6 (1-239)||(6197448-6197683)
chr6 (1-239)||(1391624-1391859)
chr6 (1-239)||(2300709-2300943)
chr6 (1-244)||(28002665-28002905)
chr6 (78-217)||(29076672-29076811)
chr6 (78-217)||(29111646-29111785)
chr6 (81-216)||(31895772-31895907)
chr6 (85-227)||(7051925-7052067)
chr6 (81-216)||(14262427-14262562)
chr6 (81-216)||(34759044-34759179)
chr6 (81-204)||(34773485-34773608)
chr6 (81-216)||(7497152-7497286)
chr6 (81-216)||(31067569-31067694)
chr6 (81-216)||(30385063-30385186)
chr6 (162-239)||(2238668-2238747)
chr6 (96-216)||(4200431-4200541)
chr6 (183-239)||(657114-657170)
chr6 (81-125)||(3848286-3848330)
chr6 (170-210)||(11113733-11113773)
chr6 (34-64)||(656998-657028)
chr6 (1-64)||(29076598-29076661)
chr6 (1-64)||(29111571-29111634)
chr6 (116-167)||(657065-657113)
chr6 (3-64)||(7051847-7051908)
[»] chr3 (64 HSPs)
chr3 (1-239)||(20498209-20498444)
chr3 (1-239)||(996057-996292)
chr3 (34-239)||(10139117-10139319)
chr3 (1-239)||(19253827-19254062)
chr3 (34-239)||(3206176-3206378)
chr3 (1-239)||(40246844-40247078)
chr3 (1-237)||(37820450-37820683)
chr3 (1-239)||(3999616-3999851)
chr3 (1-239)||(25418366-25418600)
chr3 (1-239)||(35337735-35337968)
chr3 (1-239)||(44762006-44762243)
chr3 (34-239)||(6589597-6589800)
chr3 (1-239)||(29448828-29449064)
chr3 (38-239)||(54625629-54625826)
chr3 (1-213)||(33807796-33808005)
chr3 (1-239)||(53929099-53929334)
chr3 (85-239)||(6035026-6035179)
chr3 (1-205)||(33996547-33996747)
chr3 (123-239)||(6131205-6131321)
chr3 (82-219)||(5825139-5825276)
chr3 (78-238)||(52114602-52114763)
chr3 (81-216)||(36674125-36674260)
chr3 (1-196)||(51699495-51699685)
chr3 (81-216)||(18749688-18749823)
chr3 (81-216)||(32580252-32580387)
chr3 (81-216)||(34484025-34484160)
chr3 (100-239)||(1439864-1440005)
chr3 (82-216)||(40897221-40897355)
chr3 (81-222)||(29030081-29030222)
chr3 (1-216)||(17946288-17946499)
chr3 (81-239)||(27899420-27899566)
chr3 (81-216)||(11431602-11431737)
chr3 (81-216)||(44906508-44906643)
chr3 (81-216)||(54628920-54629055)
chr3 (81-216)||(26107337-26107472)
chr3 (81-216)||(50903235-50903370)
chr3 (81-216)||(52810454-52810589)
chr3 (81-239)||(48379233-48379389)
chr3 (78-239)||(52080000-52080147)
chr3 (78-176)||(22057835-22057933)
chr3 (81-213)||(31646284-31646414)
chr3 (81-216)||(51737721-51737856)
chr3 (81-216)||(52617966-52618095)
chr3 (34-157)||(1440006-1440125)
chr3 (81-200)||(20833068-20833187)
chr3 (81-216)||(10728646-10728771)
chr3 (81-216)||(37454937-37455062)
chr3 (85-179)||(55235264-55235359)
chr3 (81-216)||(50762055-50762180)
chr3 (158-213)||(33807678-33807733)
chr3 (136-235)||(44276506-44276604)
chr3 (81-249)||(39038116-39038272)
chr3 (81-145)||(10660611-10660675)
chr3 (85-216)||(39842489-39842610)
chr3 (136-237)||(15492842-15492942)
chr3 (147-216)||(45862983-45863052)
chr3 (136-193)||(6975867-6975924)
chr3 (81-139)||(539476-539534)
chr3 (147-216)||(23753402-23753470)
chr3 (81-134)||(23753463-23753516)
chr3 (148-203)||(12103733-12103789)
chr3 (81-132)||(23535890-23535941)
chr3 (34-64)||(29030039-29030069)
chr3 (5-64)||(52114532-52114591)
[»] chr8 (39 HSPs)
chr8 (1-239)||(24501783-24502018)
chr8 (34-239)||(7506869-7507071)
chr8 (1-239)||(26374400-26374635)
chr8 (1-239)||(2704789-2705024)
chr8 (1-231)||(42938095-42938322)
chr8 (78-239)||(42937425-42937587)
chr8 (1-239)||(23115140-23115373)
chr8 (1-239)||(5576590-5576826)
chr8 (34-239)||(42735247-42735449)
chr8 (1-230)||(10392217-10392442)
chr8 (1-239)||(41479098-41479323)
chr8 (81-216)||(14782129-14782264)
chr8 (81-216)||(44725804-44725939)
chr8 (78-239)||(43959731-43959883)
chr8 (81-224)||(10295366-10295510)
chr8 (81-216)||(9288451-9288586)
chr8 (83-231)||(4949995-4950143)
chr8 (81-216)||(4403184-4403319)
chr8 (81-216)||(18958721-18958856)
chr8 (81-216)||(19717875-19718010)
chr8 (81-216)||(43166684-43166819)
chr8 (81-216)||(26856144-26856279)
chr8 (81-216)||(39467462-39467597)
chr8 (84-239)||(39189788-39189940)
chr8 (84-240)||(13478220-13478376)
chr8 (81-216)||(7466412-7466537)
chr8 (81-213)||(18305968-18306090)
chr8 (1-199)||(32711305-32711487)
chr8 (81-216)||(32497602-32497727)
chr8 (82-190)||(8410416-8410526)
chr8 (81-216)||(16362273-16362398)
chr8 (81-216)||(37857196-37857321)
chr8 (81-216)||(42305789-42305914)
chr8 (81-134)||(4031334-4031387)
chr8 (147-216)||(9770434-9770503)
chr8 (81-134)||(31623772-31623825)
chr8 (147-216)||(31623818-31623887)
chr8 (188-239)||(14028243-14028294)
chr8 (147-191)||(4031297-4031341)
[»] chr4 (68 HSPs)
chr4 (1-239)||(55302843-55303082)
chr4 (1-239)||(25331131-25331366)
chr4 (1-239)||(32950806-32951042)
chr4 (1-239)||(34228554-34228789)
chr4 (1-239)||(41881051-41881289)
chr4 (1-239)||(7007374-7007610)
chr4 (34-239)||(30009648-30009850)
chr4 (34-239)||(42786717-42786918)
chr4 (34-239)||(1044840-1045042)
chr4 (78-239)||(41320883-41321045)
chr4 (1-239)||(1112893-1113126)
chr4 (1-235)||(12112945-12113177)
chr4 (1-239)||(22202015-22202250)
chr4 (1-239)||(39479326-39479563)
chr4 (1-244)||(37046415-37046658)
chr4 (82-239)||(3436670-3436828)
chr4 (96-239)||(24130952-24131097)
chr4 (79-239)||(27454049-27454210)
chr4 (1-239)||(46635619-46635848)
chr4 (78-239)||(31314713-31314865)
chr4 (78-239)||(53275912-53276074)
chr4 (1-190)||(19740929-19741114)
chr4 (1-181)||(28541698-28541874)
chr4 (81-216)||(5441480-5441615)
chr4 (78-181)||(7249795-7249898)
chr4 (81-216)||(27768132-27768267)
chr4 (81-216)||(48261203-48261338)
chr4 (81-216)||(54341220-54341355)
chr4 (34-182)||(25446083-25446227)
chr4 (81-216)||(37828397-37828532)
chr4 (117-239)||(8711978-8712099)
chr4 (85-230)||(9163156-9163292)
chr4 (81-239)||(40537131-40537280)
chr4 (82-202)||(44770862-44770982)
chr4 (81-216)||(51320997-51321132)
chr4 (81-216)||(54853463-54853598)
chr4 (81-216)||(32322167-32322302)
chr4 (81-216)||(37915903-37916038)
chr4 (39-167)||(23464993-23465117)
chr4 (81-230)||(39307234-39307383)
chr4 (81-216)||(23987290-23987415)
chr4 (136-239)||(11090435-11090537)
chr4 (82-204)||(12913301-12913413)
chr4 (117-216)||(24736447-24736546)
chr4 (82-216)||(56445350-56445474)
chr4 (85-204)||(41725205-41725321)
chr4 (80-154)||(25504696-25504770)
chr4 (81-239)||(36479215-36479361)
chr4 (82-167)||(28371001-28371086)
chr4 (81-217)||(30967303-30967429)
chr4 (95-221)||(41581780-41581904)
chr4 (96-202)||(20021424-20021531)
chr4 (81-216)||(28483975-28484099)
chr4 (81-147)||(29649731-29649797)
chr4 (81-213)||(50018327-50018449)
chr4 (81-216)||(5800054-5800179)
chr4 (84-232)||(13400785-13400935)
chr4 (81-216)||(49501514-49501641)
chr4 (81-216)||(49507579-49507706)
chr4 (147-216)||(32684003-32684072)
chr4 (137-217)||(36727944-36728023)
chr4 (1-64)||(24131115-24131178)
chr4 (81-134)||(32684065-32684118)
chr4 (147-216)||(49834828-49834897)
chr4 (81-134)||(49834890-49834943)
chr4 (1-64)||(40537288-40537351)
chr4 (170-203)||(55047641-55047674)
chr4 (111-203)||(12193135-12193227)
[»] chr5 (28 HSPs)
chr5 (1-239)||(21147068-21147302)
chr5 (34-239)||(33656012-33656213)
chr5 (38-239)||(7016709-7016907)
chr5 (1-244)||(5272884-5273124)
chr5 (1-239)||(27458920-27459154)
chr5 (1-238)||(139274-139509)
chr5 (78-239)||(32157864-32158029)
chr5 (34-239)||(849181-849375)
chr5 (81-216)||(14000099-14000234)
chr5 (81-216)||(1152097-1152232)
chr5 (81-240)||(9689735-9689893)
chr5 (81-216)||(13926008-13926143)
chr5 (81-216)||(39852422-39852557)
chr5 (1-239)||(6460793-6461013)
chr5 (81-222)||(4550245-4550386)
chr5 (85-216)||(7947567-7947698)
chr5 (81-216)||(5949185-5949310)
chr5 (81-216)||(4240456-4240581)
chr5 (141-231)||(9220696-9220786)
chr5 (81-171)||(14465266-14465356)
chr5 (85-216)||(22746378-22746501)
chr5 (85-216)||(1461142-1461263)
chr5 (85-216)||(40013706-40013827)
chr5 (136-237)||(1511323-1511426)
chr5 (147-216)||(37014037-37014106)
chr5 (83-134)||(37013993-37014044)
chr5 (34-64)||(16894044-16894074)
chr5 (1-64)||(32158040-32158103)
[»] scaffold0400 (1 HSPs)
scaffold0400 (1-239)||(15004-15239)
[»] scaffold0365 (1 HSPs)
scaffold0365 (1-239)||(15647-15882)
[»] chr1 (50 HSPs)
chr1 (1-239)||(19451779-19452014)
chr1 (1-239)||(50192521-50192757)
chr1 (1-239)||(21222141-21222376)
chr1 (1-239)||(45759980-45760216)
chr1 (80-239)||(49198240-49198400)
chr1 (30-239)||(47780734-47780940)
chr1 (78-239)||(6304221-6304385)
chr1 (1-239)||(47654322-47654558)
chr1 (1-235)||(35679101-35679334)
chr1 (1-237)||(28824346-28824578)
chr1 (81-239)||(32588930-32589083)
chr1 (1-214)||(35279666-35279875)
chr1 (81-239)||(31572168-31572327)
chr1 (78-239)||(29556171-29556333)
chr1 (34-217)||(45535971-45536156)
chr1 (33-222)||(49418110-49418295)
chr1 (85-246)||(9577398-9577558)
chr1 (81-239)||(33025583-33025731)
chr1 (81-216)||(6312644-6312779)
chr1 (81-216)||(29396383-29396518)
chr1 (81-216)||(48177457-48177592)
chr1 (81-216)||(51701650-51701785)
chr1 (85-230)||(37014622-37014766)
chr1 (81-216)||(9322495-9322630)
chr1 (81-216)||(25612227-25612362)
chr1 (1-176)||(730142-730314)
chr1 (81-216)||(15835048-15835183)
chr1 (1-182)||(48524313-48524490)
chr1 (81-216)||(28387388-28387523)
chr1 (81-216)||(46328112-46328247)
chr1 (81-231)||(51085865-51086014)
chr1 (81-216)||(29219356-29219481)
chr1 (81-216)||(38536094-38536219)
chr1 (81-216)||(38558312-38558437)
chr1 (81-216)||(48668780-48668905)
chr1 (84-143)||(955823-955882)
chr1 (174-233)||(48524805-48524865)
chr1 (101-203)||(38319996-38320098)
chr1 (147-216)||(18798607-18798676)
chr1 (184-239)||(730307-730362)
chr1 (81-134)||(18798561-18798614)
chr1 (81-200)||(5495117-5495226)
chr1 (136-216)||(45272700-45272780)
chr1 (1-64)||(953813-953876)
chr1 (1-64)||(22183364-22183427)
chr1 (136-177)||(47784501-47784542)
chr1 (81-125)||(49230956-49231000)
chr1 (84-134)||(31622536-31622586)
chr1 (98-144)||(43885157-43885203)
chr1 (147-175)||(955876-955904)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-239)||(38867-39101)
[»] scaffold0151 (1 HSPs)
scaffold0151 (34-239)||(38576-38777)
[»] scaffold0004 (1 HSPs)
scaffold0004 (34-239)||(102129-102331)
[»] scaffold0037 (1 HSPs)
scaffold0037 (1-239)||(100212-100449)
[»] scaffold0276 (1 HSPs)
scaffold0276 (79-222)||(528-671)
[»] scaffold0543 (1 HSPs)
scaffold0543 (81-216)||(10637-10772)
[»] scaffold0110 (1 HSPs)
scaffold0110 (81-216)||(39612-39747)
[»] scaffold1504 (1 HSPs)
scaffold1504 (81-217)||(941-1076)
[»] scaffold0042 (1 HSPs)
scaffold0042 (81-216)||(58071-58206)
[»] scaffold0054 (1 HSPs)
scaffold0054 (83-213)||(36905-37035)
[»] scaffold0347 (1 HSPs)
scaffold0347 (136-216)||(14892-14972)
[»] scaffold0839 (1 HSPs)
scaffold0839 (111-216)||(3687-3792)
[»] scaffold0922 (1 HSPs)
scaffold0922 (81-141)||(4277-4337)
[»] scaffold0306 (1 HSPs)
scaffold0306 (81-216)||(13959-14084)
[»] scaffold0152 (2 HSPs)
scaffold0152 (81-216)||(21243-21368)
scaffold0152 (172-216)||(28510-28554)
[»] scaffold0007 (1 HSPs)
scaffold0007 (84-177)||(199905-199998)


Alignment Details
Target: chr2 (Bit Score: 164; Significance: 9e-88; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 24776357 - 24776591
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||||||    |||||||||||| ||||||    
T  24776357 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcattca 24776452  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24776453 aatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 24776552  T
Q  201 tcttaagattgttttttcttttaagattttactatctct 239  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  24776553 tcttaggattgttttttcttttaagattttactatctct 24776591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 12407382 - 12407617
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       ||| |||||||||||||| ||||||||||||||||       ||||||    |||||||||||| ||||||    
T  12407382 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcattca 12407477  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  12407478 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaccatgaaaaagtctttcatgaaaacatgagatt 12407577  T
Q  201 tcttaagattg-ttttttcttttaagattttactatctct 239  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  12407578 tcttaagattgtttttttcttttaagattttactatctct 12407617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 20605238 - 20605473
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||||||    |||||||||||| |||| |    
T  20605238 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcattaa 20605333  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20605334 aatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 20605433  T
Q  201 tcttaagattg-ttttttcttttaagattttactatctct 239  Q
    ||||| ||||| ||||||||||||||||||||||||||||    
T  20605434 tcttaggattgtttttttcttttaagattttactatctct 20605473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 31170832 - 31170597
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||||||    |||||||||||| ||||||    
T  31170832 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcattca 31170737  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31170736 aatttccaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 31170637  T
Q  201 tcttaagattgtt-ttttcttttaagattttactatctct 239  Q
    ||||| ||||||| ||||||||||||||||||||||||||    
T  31170636 tcttaggattgtttttttcttttaagattttactatctct 31170597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 16269693 - 16269927
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||||||    |||||||||||| ||||||    
T  16269693 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcattca 16269788  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  16269789 aatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttatagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 16269888  T
Q  201 tcttaagattg-ttttttcttttaagattttactatctc 238  Q
    ||||| ||||| |||||||||||||||||||||||||||    
T  16269889 tcttaggattgtttttttcttttaagattttactatctc 16269927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 14198785 - 14198550
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||| ||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||| ||    |||||||||||| ||||||    
T  14198785 caatcaaaattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtccag----tggtattcaaaatcattca 14198690  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  14198689 aatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaattctttcatgaaaacatgagatt 14198590  T
Q  201 tcttaagattgtt-ttttcttttaagattttactatctct 239  Q
    ||||| ||||||| ||||||||||||||||||||||||||    
T  14198589 tcttaggattgtttttttcttttaagattttactatctct 14198550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 35317064 - 35317299
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       ||| |||  ||||||||||||||||||||||||||       ||||||    |||||||||||| ||||||    
T  35317064 caatcaagattctttgtcatttaaaaaaagtcttgtaatattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcattca 35317159  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  35317160 aatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatt 35317259  T
Q  201 tcttaagattg-ttttttcttttaagattttactatctct 239  Q
    |||||| |||| ||||||||||||||||||||||||||||    
T  35317260 tcttaacattgtttttttcttttaagattttactatctct 35317299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 43847648 - 43847883
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||       |||||| |    |||||||||| ||||||    
T  43847648 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtt----gtattcaaaatcattca 43847743  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  43847744 aatttcgaaggattgtttaataaatcagaatttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctgtcatgaaaacatgagatt 43847843  T
Q  201 tcttaagattg-ttttttcttttaagattttactatctct 239  Q
    ||||| ||||| ||||||||||||||||||||||||||||    
T  43847844 tcttaggattgtttttttcttttaagattttactatctct 43847883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 305673 - 305439
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||| ||||||||||       ||| |||||||||||||||||||||||||||||||       ||||||    |||||||||||| ||||||    
T  305673 caatcaagattatttgtcatttgaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcattca 305578  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  305577 aattttgaatgattgtttaataaatcagatttcgatggattttgtgagattttctagtgaaattttagaatgaaaaagtctttcatgaaaacatgagatt 305478  T
Q  201 tcttaagattgttt-tttcttttaagattttactatctc 238  Q
    ||||| |||||||| ||||||||||||||||||||||||    
T  305477 tcttaggattgtttatttcttttaagattttactatctc 305439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 5093255 - 5093014
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       ||| ||||||||||||||||||| |||||||||||       ||||||    | |||||||||| ||||||    
T  5093255 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacgcttaatcacttaaaaaaagtctag----tagtattcaaaatcattca 5093160  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  5093159 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcataaaaacatgagatt 5093060  T
Q  201 tcttaagattgtt--ttttcttttaagattttactatctctgctcc 244  Q
    ||||| |||||||  |||||||||||||||||||| ||||| ||||    
T  5093059 tcttaggattgttttttttcttttaagattttactctctctcctcc 5093014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 22551971 - 22551736
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       ||| |||||||||||||||||||| ||||||||||       ||||||    ||||||||||||  |||||    
T  22551971 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttaaaaaaagtctag----tggtattcaaaattattca 22551876  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| ||| ||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  22551875 aatttcgaatgattgtttattaaattaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttcatgaaaacatgagatt 22551776  T
Q  201 tcttaagattgtttttt-cttttaagattttactatctct 239  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  22551775 tcttatgattgttttttccttttaagattttactatctct 22551736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 80 - 239
Target Start/End: Original strand, 32125330 - 32125491
Alignment:
Q  80 agtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagt 179  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  32125330 agtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagt 32125429  T
Q  180 ctttcatgaaaacatgagatttctt-aagattg-ttttttcttttaagattttactatctct 239  Q
    |||||||||||| |||||||||||| || |||| ||||||||||||||||||||||||||||    
T  32125430 ctttcatgaaaatatgagatttcttaaaaattgtttttttcttttaagattttactatctct 32125491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 78 - 239
Target Start/End: Original strand, 9120201 - 9120363
Alignment:
Q  78 ctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaa 177  Q
    |||||| ||||||||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  9120201 ctagtgatattcaaaatcattcagattttaaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagtatggaaaa 9120300  T
Q  178 gtctttcatgaaaacatgagatttcttaagattg-ttttttcttttaagattttactatctct 239  Q
     ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  9120301 atctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttactatctct 9120363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 44765777 - 44766003
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       ||| |||||||||||||| ||||||||||||||||       ||||||    |||||||||||| ||||||    
T  44765777 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcattca 44765872  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||    
T  44765873 aatttcgaaagattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcat---------tttcatgaaaacatgagatt 44765963  T
Q  201 tcttaagattg-ttttttcttttaagattttactatctct 239  Q
    ||||| ||||| ||||||||||||| ||||||||||||||    
T  44765964 tcttaggattgtttttttcttttaaaattttactatctct 44766003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 1789444 - 1789681
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       ||| | || ||||||||||| ||||||||||||||       ||||||    |||||||||||| ||||||    
T  1789444 caatcaagattctttgtcatttaaaaaaagtcttatgatattcaatcaaaactcttaatcacttaaaaaaagtctag----tggtattcaaaatcattca 1789539  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa-ca-tgaga 198  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| || | | |    
T  1789540 aatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatcaaaatcattcaaa 1789639  T
Q  199 tttcttaagatt-gttttttcttttaagattttactatctct 239  Q
     |||||| ||||  ||||||||||||| ||||||||||||||    
T  1789640 attcttaggattatttttttcttttaaaattttactatctct 1789681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 28844633 - 28844768
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||||||  | |||||||||    
T  28844633 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattagattttgatggattttgtggaattttgtagtgtaattttaataagaaaaagtc 28844732  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    |||||| |||| |||||||||||| |||||||||||    
T  28844733 tttcataaaaagatgagatttcttgagattgttttt 28844768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 33135701 - 33135835
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  33135701 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 33135800  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    |||||| |||| |||||||||||| |||||||||||    
T  33135801 tttcat-aaaaaatgagatttcttgagattgttttt 33135835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 26788864 - 26788996
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  26788864 gtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 26788963  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||   || |||||||||||| |||||||||||    
T  26788964 tttcat---aagatgagatttcttgagattgttttt 26788996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 10657484 - 10657619
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| ||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||||||     
T  10657484 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagta 10657583  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||| ||||||| |||||||||||    
T  10657584 tttcatgaaaagatgaaatttcttgagattgttttt 10657619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 18177345 - 18177480
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| ||||||||||||||| |||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  18177345 gtggtattcaaaatcattcaaatttcgaaggattgtttaattaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 18177444  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||| || |||| |||||||||||| |||||||||||    
T  18177445 tttaataaaaagatgagatttcttgagattgttttt 18177480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 25288237 - 25288372
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  |||||||||| ||||||||||||||| ||||| ||||||| || || || |||    
T  25288237 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagagaacgtc 25288336  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  25288337 tttcatgaaaagatgagatttcttgagattgttttt 25288372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 95 - 216
Target Start/End: Original strand, 43078655 - 43078776
Alignment:
Q  95 cattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 194  Q
    ||||||||||| ||| |||||||||||||||  |||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||||| |||| ||    
T  43078655 cattcaaatttcgaatgattgtttaataaattggattttcatggattttgtgggattttatagtgtaattttaacatgaaaaagtctttcataaaaagat 43078754  T
Q  195 gagatttcttaagattgttttt 216  Q
     ||||||||| |||||||||||    
T  43078755 aagatttcttgagattgttttt 43078776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 239
Target Start/End: Complemental strand, 10125418 - 10125275
Alignment:
Q  85 tattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttc 184  Q
    ||||||||| |||||||||||  ||||||||||||||||||          || ||||||||||||||| ||||||||||||| || |||||||||||||    
T  10125418 tattcaaaatcattcaaatttcaaaggattgtttaataaat----------tgaattttgtgggattttttagtgaaattttaacaagaaaaagtctttc 10125329  T
Q  185 atgaaaacatgagatttcttaagattgttttttcttttaagattttactatctct 239  Q
    || |||||| |||||||||||||||||| ||||||||||| | ||||||||||||    
T  10125328 ataaaaacacgagatttcttaagattgt-ttttcttttaaaagtttactatctct 10125275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 82 - 216
Target Start/End: Complemental strand, 13833553 - 13833429
Alignment:
Q  82 tggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtct 181  Q
    |||||||||||| |||||||||||||||||||||||||||||||          |||||||||||||||||| ||||| ||||||| || ||||||||||    
T  13833553 tggtattcaaaatcattcaaattttgaaggattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtct 13833464  T
Q  182 ttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||| || |||||||||||| |||||| ||||    
T  13833463 ttcatgacaagatgagatttcttgagattgctttt 13833429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 81 - 239
Target Start/End: Complemental strand, 26601332 - 26601186
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| ||| | ||||||||||||||||||||||          |||||||||||||||||| |||| ||| |||| ||     
T  26601332 gtggtattcaaaatcattcaaatttcgaatgtttgtttaataaatcagattttg----------tgggattttctagtgaaactttaacattaaaa-gtt 26601244  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttttcttttaagattttactatctct 239  Q
    ||| |||||||||| |||||| ||| |||||||||||||||||||||||||||||||||    
T  26601243 tttgatgaaaacat-agattttttaggattgttttttcttttaagattttactatctct 26601186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 28740415 - 28740290
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  |||||||||||||||||||          ||| ||||||| || |||||||||    
T  28740415 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtc 28740326  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    |||||| |||| |||||||||||| |||||||||||    
T  28740325 tttcataaaaagatgagatttcttgagattgttttt 28740290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 3463750 - 3463875
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    |||||||| |||| ||||||| |||  ||||||||||||||||||  ||||||||||||||||||          |||| ||||||| || |||||||||    
T  3463750 gtggtatttaaaatcattcaattttcaaaggattgtttaataaattggattttgatggattttgt----------agtgtaattttaacaagaaaaagtc 3463839  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  3463840 tttcatgaaaatatgagatttcttgagattgttttt 3463875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 82 - 216
Target Start/End: Original strand, 379016 - 379140
Alignment:
Q  82 tggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtct 181  Q
    |||||||||||| |||||||||||||||||||||||||||||||  ||||||||| |||||||          ||||| ||||||| || |||||| ||     
T  379016 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatagattttg----------tagtgtaattttaacaagaaaaaatcg 379105  T
Q  182 ttcatgaaaacatgagatttcttaagattgttttt 216  Q
    |||||||||| ||||||||| || |||||||||||    
T  379106 ttcatgaaaagatgagatttattgagattgttttt 379140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 145
Target Start/End: Original strand, 7026682 - 7026746
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgt 145  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  ||||||||||||||||||    
T  7026682 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 7026746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 6224633 - 6224564
Alignment:
Q  147 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||| ||||| ||||||| || |||||||||||||||||||| |||||||||||| | |||||||||    
T  6224633 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgatattgttttt 6224564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 215303 - 215235
Alignment:
Q  147 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||| ||||| ||||||| || |||||||||||||||||||| |||||||||| | |||||||||||    
T  215303 ggattttgtagtgtaattttaaca-gaaaaagtctttcatgaaaagatgagatttcatgagattgttttt 215235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 85 - 134
Target Start/End: Original strand, 3574929 - 3574978
Alignment:
Q  85 tattcaaaagcattcaaattttgaaggattgtttaataaatcagattttg 134  Q
    ||||||||| ||||||||||| |||||||||||||||||||  |||||||    
T  3574929 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 3574978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 32125252 - 32125310
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaat 59  Q
    ||||||| ||||||||||||||       ||||||||||||||||||||||||||||||    
T  32125252 caatcaaaattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaat 32125310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 7027056 - 7027100
Alignment:
Q  172 gaaaaagtctttcatgaaaacatgagatttcttaagattgttttt 216  Q
    |||||| ||||||||||||| |||||||||||| |||||||||||    
T  7027056 gaaaaaatctttcatgaaaagatgagatttcttgagattgttttt 7027100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 21370682 - 21370638
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaat 125  Q
    ||||||||||||| |||||||||||||||| ||||||| ||||||    
T  21370682 gtggtattcaaaatcattcaaattttgaagtattgtttgataaat 21370638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 20605154 - 20605209
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactctt 56  Q
    ||||||||||||||||||||||       ||| |||||||||||||||||||||||    
T  20605154 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactctt 20605209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 134
Target Start/End: Complemental strand, 6224679 - 6224626
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttg 134  Q
    |||||||||||||  |||||||||| |||||||| ||||||||||  |||||||    
T  6224679 gtggtattcaaaattattcaaatttcgaaggattatttaataaattggattttg 6224626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 157; Significance: 1e-83; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 47914268 - 47914503
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||       ||||||    || ||||||||| ||||||    
T  47914268 caatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tgatattcaaaatcattca 47914363  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47914364 aatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 47914463  T
Q  201 tcttaagattg-ttttttcttttaagattttactatctct 239  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  47914464 tcttaagattgtttttttcttttaagattttactatctct 47914503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 47879170 - 47879405
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||       ||||||    || ||||||||| ||||||    
T  47879170 caatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tgatattcaaaatcattca 47879265  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    |||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47879266 aatttaaaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 47879365  T
Q  201 tcttaagattg-ttttttcttttaagattttactatctct 239  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  47879366 tcttaagattgtttttttcttttaagattttactatctct 47879405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 40996854 - 40996619
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       ||| ||||||||||||||||||||||||||| |||       ||||||    |||||||||||| ||||||    
T  40996854 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcgcttaaaaaaagtctag----tggtattcaaaatcattca 40996759  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40996758 aatttcgaaggattgtttaataaatcagattttgatggattttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 40996659  T
Q  201 tcttaagattgtt-ttttcttttaagattttactatctct 239  Q
    ||||| ||||||| ||||||||||||||||||||||||||    
T  40996658 tcttaggattgtttttttcttttaagattttactatctct 40996619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 43581295 - 43581060
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       ||| ||| |||||||||||||||||||||||||||       ||||||    |||||||||||| ||||||    
T  43581295 caatcaagattctttgtcatttaaaaaaagtcttgttgtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcattca 43581200  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43581199 aatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 43581100  T
Q  201 tcttaagatt-gttttttcttttaagattttactatctct 239  Q
    ||||| ||||  ||||||||||||||||||||||||||||    
T  43581099 tcttaggattatttttttcttttaagattttactatctct 43581060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 973186 - 973421
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||        | |||    |||||||||||| ||||||    
T  973186 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatttag----tggtattcaaaatcattca 973281  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  973282 aatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaagaaaaagtctttcatgaaaacatgagatt 973381  T
Q  201 tcttaagattg-ttttttcttttaagattttactatctct 239  Q
    ||||| ||||| ||||||||||||||||||||||||||||    
T  973382 tcttaggattgtttttttcttttaagattttactatctct 973421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 30440798 - 30441033
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||        || |||||||||||||||||||||||||||||||       ||||||    |||||||||||| ||||||    
T  30440798 caatcaagattctttgtcatttaaaaaaaatcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcattca 30440893  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  30440894 aatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagtatgaaaaagtctttcgtgaaaacatgagatt 30440993  T
Q  201 tcttaagattg-ttttttcttttaagattttactatctct 239  Q
    ||||| ||||| ||||||||||||||||||||||||||||    
T  30440994 tcttaggattgtttttttcttttaagattttactatctct 30441033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 34 - 239
Target Start/End: Original strand, 34695308 - 34695510
Alignment:
Q  34 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagatttt 133  Q
    |||||||||||||||||||||||||||||||       ||| ||    |||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  34695308 tgtggtattcaatcaagactcttaatcacttaaaaaaagtccag----tggtattcaaaaccattcaaatttcgaaggattgtttaataaatcagatttt 34695403  T
Q  134 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattg-ttttttcttttaagattttac 232  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  34695404 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttac 34695503  T
Q  233 tatctct 239  Q
    |||||||    
T  34695504 tatctct 34695510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 34 - 239
Target Start/End: Complemental strand, 7718534 - 7718333
Alignment:
Q  34 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagatttt 133  Q
    |||||||||||||||||||||||||||||||       ||||||    |||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  7718534 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 7718439  T
Q  134 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgttttttcttttaagattttact 233  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||  ||||    
T  7718438 gatggattttgtgggattttctagtgaaattttagcatgaaaaaatctttcatgaaaacatgagatttcttaggattgttttttcttttaagataatact 7718339  T
Q  234 atctct 239  Q
    ||||||    
T  7718338 atctct 7718333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 34 - 239
Target Start/End: Complemental strand, 18914907 - 18914705
Alignment:
Q  34 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagatttt 133  Q
    |||||||||||||||||||||||||||||||       ||||||    |||||||||||| |||||||||||  |||| |||||||||||||||||||||    
T  18914907 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcattcaaatttcaaaggtttgtttaataaatcagatttt 18914812  T
Q  134 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgtt-ttttcttttaagattttac 232  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  18914811 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttac 18914712  T
Q  233 tatctct 239  Q
    |||||||    
T  18914711 tatctct 18914705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 34 - 239
Target Start/End: Complemental strand, 7719432 - 7719230
Alignment:
Q  34 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagatttt 133  Q
    |||||||||||||||||||||||||||||||        |||||    |||||||||||| ||||||||||| ||| |||||||||||||||||||||||    
T  7719432 tgtggtattcaatcaagactcttaatcacttaaaaaaaatctag----tggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagatttt 7719337  T
Q  134 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgtt-ttttcttttaagattttac 232  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||     
T  7719336 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttaa 7719237  T
Q  233 tatctct 239  Q
    |||||||    
T  7719236 tatctct 7719230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 44343601 - 44343366
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       ||| |||| ||||||||||||||||||||||||||       || |||    ||||||| |||| ||||||    
T  44343601 caatcaagattctttgtcatttaaaaaaagtcttgtgatattcaatcaagactcttaatcacttaaaaaaagtttag----tggtatttaaaatcattca 44343506  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  44343505 aatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcacgaaaacatgagatt 44343406  T
Q  201 tcttaagattgtt-ttttcttttaagattttactatctct 239  Q
    ||||| ||||||| |||||||||||||||||| |||||||    
T  44343405 tcttaggattgtttttttcttttaagattttagtatctct 44343366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 81 - 239
Target Start/End: Complemental strand, 32143046 - 32142887
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32143046 gtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 32142947  T
Q  181 tttcatgaaaacatgagatttcttaagattgtt-ttttcttttaagattttactatctct 239  Q
    || ||| |||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  32142946 ttccataaaaacatgagatttcttaagattgtttttttcttttaagattttagtatctct 32142887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 12893410 - 12893647
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       ||| ||||||||| |||||||||||||||||||||       |||||     |||||||||||| ||||||    
T  12893410 caatcaagattctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttaatcacttaaaaaaagtctaa----tggtattcaaaatcattca 12893505  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12893506 aatttcgaagaattgtttaataaatcagattttgatggattttgtgagattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 12893605  T
Q  201 tcttaagattg---ttttttcttttaagattttactatctct 239  Q
    ||||| |||||   |||||||||||||||||||| |||||||    
T  12893606 tcttaggattgtttttttttcttttaagattttattatctct 12893647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 34009014 - 34009250
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||| ||||||||||       ||| |||||||||||||||| ||||||||||||||       |||   |||||||||||||||| ||||||    
T  34009014 caatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaacactcttaatcacttaaaaaaagtc---ctagtggtattcaaaatcattca 34009110  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||||||| ||||||||||||| ||||||||||||||    
T  34009111 aatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctaataaaattttagcataaaaaagtctttcaagaaaacatgagatt 34009210  T
Q  201 tcttaagattg-ttttttcttttaagattttactatctct 239  Q
    ||||| ||||| ||||||||||||||||||||||||||||    
T  34009211 tcttaggattgtttttttcttttaagattttactatctct 34009250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 34 - 239
Target Start/End: Complemental strand, 39219548 - 39219347
Alignment:
Q  34 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagatttt 133  Q
    |||| ||||||||||||||||||||||||||       |||||     |||||||||||| |||||||||||||| | ||||||||||||||||||||||    
T  39219548 tgtgttattcaatcaagactcttaatcacttaaaaaaagtctat----tggtattcaaaatcattcaaattttgatg-attgtttaataaatcagatttt 39219454  T
Q  134 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgtt-ttttcttttaagattttac 232  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||    
T  39219453 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaggattgtttttttcttttaagattttac 39219354  T
Q  233 tatctct 239  Q
    |||||||    
T  39219353 tatctct 39219347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 20275468 - 20275233
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    |||||||||||| |||||||||       ||| | |||||||||||||||||||||||||||||       ||||   || |||||||||||| ||||||    
T  20275468 caatcaagattccttgtcatttaaaaaaagtcttatggtattcaatcaagactcttaatcacttaaaaaaagtct---ta-tggtattcaaaatcattca 20275373  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||    
T  20275372 aatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctgtcatgaaagcatgagatt 20275273  T
Q  201 tcttaagattg-ttttttcttttaagattttactatctct 239  Q
    |||||  |||| ||||||||||||||||||||||||||||    
T  20275272 tcttagcattgtttttttcttttaagattttactatctct 20275233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 81 - 239
Target Start/End: Original strand, 10068538 - 10068695
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||     
T  10068538 gtggtattcaaaatcattcaaattttgaaggattgtttaataaattaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagta 10068637  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttttcttttaagattttactatctct 239  Q
    |||||| |||||||||||||| ||| ||||| |||||||||||| |||||||| |||||    
T  10068638 tttcataaaaacatgagatttgttaggattg-tttttcttttaaaattttactctctct 10068695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 80 - 239
Target Start/End: Original strand, 7113529 - 7113689
Alignment:
Q  80 agtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagt 179  Q
    ||||||||||||||  |||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||    
T  7113529 agtggtattcaaaataattcaaatttcgcaggattgtttaataaatcagattttgatagattttgtgggattttctaggaaaattttagcatgaaaaagt 7113628  T
Q  180 ctttcatgaaaacatgagatttcttaagattg-ttttttcttttaagattttactatctct 239  Q
    ||||||||||||||||| |||||||| ||||| |||||||||||| |||||||||||||||    
T  7113629 ctttcatgaaaacatgaaatttcttaggattgtttttttcttttaggattttactatctct 7113689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 23101369 - 23101504
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  23101369 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 23101468  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  23101469 tttcatgaaaagatgagatttcttgagattgttttt 23101504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 28342418 - 28342553
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  28342418 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 28342517  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  28342518 tttcatgaaaagatgagatttcttgagattgttttt 28342553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 80 - 181
Target Start/End: Original strand, 43679491 - 43679592
Alignment:
Q  80 agtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagt 179  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43679491 agtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagt 43679590  T
Q  180 ct 181  Q
    ||    
T  43679591 ct 43679592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 3022997 - 3023132
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||||||     
T  3022997 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtt 3023096  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  3023097 tttcatgaaaagatgagatttcttgagattgttttt 3023132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 39784170 - 39784305
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| |||| |||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  39784170 gtggtattcaaaatcatttaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 39784269  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  39784270 tttcatgaaaagatgagatttcttgagattgttttt 39784305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 81 - 239
Target Start/End: Original strand, 12963772 - 12963924
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||| ||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  12963772 gtggtatccaaaatcattcaaatttcgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagtaagaaaaagtc 12963871  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttttcttttaagattttactatctct 239  Q
    |||  |     ||||||||||||| |||||| |||||||||||| ||||||||||||||    
T  12963872 tttttt-----catgagatttcttgagattg-tttttcttttaaaattttactatctct 12963924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 82 - 236
Target Start/End: Complemental strand, 43187485 - 43187332
Alignment:
Q  82 tggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtct 181  Q
    |||||||||||| |||||||||||||||| ||||||||||||||  |||||||||| ||||||| ||||||||||||||||||||| || ||||||||||    
T  43187485 tggtattcaaaatcattcaaattttgaagcattgtttaataaattggattttgatgaattttgtcggattttctagtgaaattttaacaagaaaaagtct 43187386  T
Q  182 ttcatgaaaacatgagatttcttaagattgttttttcttttaagattttactatc 236  Q
    |||||||| ||||||||||| ||  ||||| |||||||||||| | |||||||||    
T  43187385 ttcatgaagacatgagattttttgggattg-tttttcttttaaaagtttactatc 43187332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 18838460 - 18838595
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| ||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||||||     
T  18838460 gtggtattcaaaatcattcaaatttcgaaagattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagta 18838559  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  18838560 tttcatgaaaagatgagatttcttgagattgttttt 18838595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 85 - 216
Target Start/End: Complemental strand, 29614889 - 29614758
Alignment:
Q  85 tattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttc 184  Q
    ||||||||| ||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||    
T  29614889 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttc 29614790  T
Q  185 atgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||| |||||||||||| ||||| |||||    
T  29614789 atgaaaagatgagatttcttgagattattttt 29614758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 82 - 239
Target Start/End: Original strand, 33382709 - 33382864
Alignment:
Q  82 tggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtct 181  Q
    |||||||||||| |||| |||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||||||||    
T  33382709 tggtattcaaaatcatttaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtct 33382808  T
Q  182 ttcatgaaaacatgagatttcttaagattgttttttcttttaagattttactatctct 239  Q
    || ||||||| ||||||||| || |||||| |||||||||||| | ||||||||||||    
T  33382809 tttatgaaaagatgagatttatttagattg-tttttcttttaa-aatttactatctct 33382864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 28034934 - 28034799
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    |||||||||||||  ||||||||||  ||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| ||  ||||||||    
T  28034934 gtggtattcaaaattattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaaaaaaaagtc 28034835  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  28034834 tttcatgaaaagatgagatttcttgagattgttttt 28034799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 82 - 216
Target Start/End: Original strand, 7993214 - 7993348
Alignment:
Q  82 tggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtct 181  Q
    |||||||||||| ||||||||||| |||||||||||||||||||   ||||||||||||| ||||||||||| ||||| ||||||| || ||||||||||    
T  7993214 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattgtgtgggattttgtagtgtaattttaacaagaaaaagtct 7993313  T
Q  182 ttcatgaaaacatgagatttcttaagattgttttt 216  Q
    |||||||||| || ||||||||| |||||||||||    
T  7993314 ttcatgaaaagataagatttcttgagattgttttt 7993348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 8675404 - 8675539
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| |||| ||| || |||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||| ||    
T  8675404 gtggtattcaaaatcatttaaacttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatc 8675503  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||| ||||||| |||||||||||| |||||||||||    
T  8675504 ttttatgaaaagatgagatttcttgagattgttttt 8675539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 9882365 - 9882231
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| ||| |||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||  | |||||||||    
T  9882365 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaagaagaaaaagtc 9882266  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    |||||| |||| |||||||||||| |||||||||||    
T  9882265 tttcat-aaaaaatgagatttcttgagattgttttt 9882231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 81 - 215
Target Start/End: Original strand, 12740444 - 12740577
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| |||||||||||  ||||||||||||||||||  ||||||||| |||||||||||||||| ||||| ||||||| || || ||||||    
T  12740444 gtggtattcaaaatcattcaaatttcaaaggattgtttaataaatg-gattttgatagattttgtgggattttatagtgtaattttaacaagagaaagtc 12740542  T
Q  181 tttcatgaaaacatgagatttcttaagattgtttt 215  Q
    |||||| |||| |||||||||||||||||||||||    
T  12740543 tttcataaaaagatgagatttcttaagattgtttt 12740577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 96 - 216
Target Start/End: Original strand, 41827390 - 41827510
Alignment:
Q  96 attcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatg 195  Q
    ||||||| ||||||||||||||||||||||  |||||||||||||||||||||||| | ||||| ||||||| || ||||| |||||||||||||| |||    
T  41827390 attcaaaatttgaaggattgtttaataaattggattttgatggattttgtgggattgtgtagtgtaattttaacaagaaaatgtctttcatgaaaatatg 41827489  T
Q  196 agatttcttaagattgttttt 216  Q
    ||||||||| |||||||||||    
T  41827490 agatttcttgagattgttttt 41827510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 96 - 216
Target Start/End: Complemental strand, 37972981 - 37972861
Alignment:
Q  96 attcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatg 195  Q
    |||||||||| |||||||| ||||||||||  ||||||||||||||||| |||||||| ||||| ||||||| || |||||||||||||||||||| |||    
T  37972981 attcaaatttcgaaggattatttaataaattggattttgatggattttgcgggattttatagtgtaattttaacaagaaaaagtctttcatgaaaagatg 37972882  T
Q  196 agatttcttaagattgttttt 216  Q
    ||| ||||| |||||||||||    
T  37972881 agacttcttgagattgttttt 37972861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 81 - 229
Target Start/End: Complemental strand, 3797186 - 3797049
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||| | |||| |||||||||||||||||||||||||| ||||||||||||         |||||||||||||||||||||||||||||||||    
T  3797186 gtggtattcaagatcattaaaattttgaaggattgtttaataaattagattttgatgg---------gattttctagtgaaattttagcatgaaaaagtc 3797096  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttttcttttaagattt 229  Q
    ||| | |||||||| |||||||||| ||||| |||||||||||| ||||    
T  3797095 ttttaagaaaacat-agatttcttaggattg-tttttcttttaaaattt 3797049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 136 - 216
Target Start/End: Original strand, 9179996 - 9180076
Alignment:
Q  136 tggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgttttt 216  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  9179996 tggattttgtgggattttctagtgaatttttagcataaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 9180076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 81 - 239
Target Start/End: Complemental strand, 1470362 - 1470206
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| | |||||||||| ||| |||||||||| ||| |||||||||| | ||||||||||||||||  | |||||||||||||||||| ||    
T  1470362 gtggtattcaaaatcgttcaaattttaaagcattgtttaatgaattagattttgatag-ttttgtgggattttctgataaaattttagcatgaaaaaatc 1470264  T
Q  181 tttcatgaaaacatgagatttcttaagattg-ttttttcttttaagattttactatctct 239  Q
    |||  |||||||  |||||||| ||  |||| ||||||||||||||||||||| ||||||    
T  1470263 ttttttgaaaac--gagatttcctagcattgtttttttcttttaagattttaccatctct 1470206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 136 - 216
Target Start/End: Original strand, 19810915 - 19810995
Alignment:
Q  136 tggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgttttt 216  Q
    |||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||    
T  19810915 tggattttgtggaattttctagtgaaattttagcataaaaatgtctttcatgaaaacatgagatttcttgagattgttttt 19810995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 78 - 192
Target Start/End: Original strand, 727588 - 727692
Alignment:
Q  78 ctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaa 177  Q
    ||||| |||||||||| |||||||||||  ||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||    
T  727588 ctagtagtattcaaaatcattcaaatttcaaaggattgtttaataaatcagatt----------ttgtgggattttctagtgaaattttagcatgaaaaa 727677  T
Q  178 gtctttcatgaaaac 192  Q
    |||||||||||||||    
T  727678 gtctttcatgaaaac 727692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 81 - 180
Target Start/End: Original strand, 25805763 - 25805862
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| | |||||||||||||||||   ||| |||||||||||||||||||||||| | |||||||||||||||||||||    
T  25805763 gtggtattcaaaatcattcaaatttcgtaggattgtttaataaattgaattatgatggattttgtgggattttctaataaaattttagcatgaaaaagtc 25805862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 44256895 - 44256760
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| ||| |||||||||||||||  ||||| |||| ||||||| |||||||  |||| ||||||| || ||||||||     
T  44256895 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggatttggatgaattttgttggattttgcagtgtaattttaacaagaaaaagtt 44256796  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    |||||| |||| ||||||||| || |||||||||||    
T  44256795 tttcatcaaaatatgagattttttgagattgttttt 44256760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 143
Target Start/End: Original strand, 31638910 - 31639015
Alignment:
Q  34 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagatttt 133  Q
    |||||||||| ||||||||||||||||||||       ||||||    |||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  31638910 tgtggtattctatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 31639005  T
Q  134 gatggatttt 143  Q
    ||||||||||    
T  31639006 gatggatttt 31639015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 509727 - 509852
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| ||| |||||||||||||||  |||||||||||||||||          |||||  |||||| || |||||||||    
T  509727 gtggtattcaaaatcattcaaatttcgaacgattgtttaataaattggattttgatggattttg----------tagtgggattttaacaagaaaaagtc 509816  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  509817 tttcatgaaaagatgagatttcttgagattgttttt 509852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 40460836 - 40460711
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| ||| |||||||||||||||  ||||||||||||||||||          |||| ||||||| || |||||| ||    
T  40460836 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgt----------agtgtaattttaacaagaaaaaatc 40460747  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  40460746 tttcatgaaaatatgagatttcttgagattgttttt 40460711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 44122029 - 44121904
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  |||||||||||||||||          ||||| ||||||| || |||||||||    
T  44122029 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttg----------tagtgtaattttaacaagaaaaagtc 44121940  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||| ||||||| ||||||||| || |||||||||||    
T  44121939 tttaatgaaaagatgagattttttgagattgttttt 44121904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 82 - 216
Target Start/End: Original strand, 29585586 - 29585710
Alignment:
Q  82 tggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtct 181  Q
    |||||||||||| ||||||||||||||||||||||||||||| |  |||||||||||||||||          ||||| ||||||| || ||||||||||    
T  29585586 tggtattcaaaatcattcaaattttgaaggattgtttaataatttggattttgatggattttg----------tagtgtaattttaacaagaaaaagtct 29585675  T
Q  182 ttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||| |||| |||| ||||||| |||||||||||    
T  29585676 ttcataaaaagatgaaatttcttgagattgttttt 29585710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 81 - 204
Target Start/End: Original strand, 19251610 - 19251723
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||          |||||||||  ||||||||| ||||||||||||||  ||||||||    
T  19251610 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaat----------tggattttgatggattttcttgtgaaattttagcaataaaaagtc 19251699  T
Q  181 tttcatgaaaacatgagatttctt 204  Q
    |||||||||||| ||| |||||||    
T  19251700 tttcatgaaaacctgaaatttctt 19251723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 84 - 167
Target Start/End: Complemental strand, 10676546 - 10676463
Alignment:
Q  84 gtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 167  Q
    |||||||||| ||||||||||| |||||||||||||||||||  ||||| |||||||||| ||| ||||||| |||||||||||    
T  10676546 gtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttggatggattttatggaattttcttgtgaaatttta 10676463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 81 - 176
Target Start/End: Original strand, 32883853 - 32883948
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaa 176  Q
    ||||||||||||| ||||||||||| ||| ||||||||| |||||  ||||||||||||||| |||||||||| ||||| ||||||| || |||||    
T  32883853 gtggtattcaaaatcattcaaatttcgaatgattgtttattaaattggattttgatggatttcgtgggattttgtagtgtaattttaacaagaaaa 32883948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 116 - 239
Target Start/End: Original strand, 10617024 - 10617147
Alignment:
Q  116 tttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat-gagatttcttaagattgttt 214  Q
    |||||||||| |||||||||||||||||||| ||||||||||||| ||||||| |  || ||||||||||| |||||||  |||||| ||  |||||  |    
T  10617024 tttaataaattagattttgatggattttgtgagattttctagtgatattttagtaataacaagtctttcataaaaacataaagattttttgggattg-ct 10617122  T
Q  215 tttcttttaagattttactatctct 239  Q
    |||||||||| |||||||| |||||    
T  10617123 tttcttttaaaattttactctctct 10617147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 46405560 - 46405435
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| |||||||||||  || |||||||||||||||  |||||||||||||||||||          ||| ||||||| || ||||||||     
T  46405560 gtggtattcaaaatcattcaaatttcaaatgattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagta 46405471  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||| || |||| |||||||||||| |||||||||||    
T  46405470 tttaataaaaagatgagatttcttgagattgttttt 46405435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 184 - 239
Target Start/End: Original strand, 31639031 - 31639087
Alignment:
Q  184 catgaaaacatgagatttcttaagattgtttt-ttcttttaagattttactatctct 239  Q
    ||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||    
T  31639031 catgaaaacatgatatttcttaggattgtttttttcttttaagattttactatctct 31639087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 37327998 - 37328123
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| |||||||||||  ||||||||||||||||||   ||||||||||||||||| | ||          ||||||| ||  ||||||||    
T  37327998 gtggtattcaaaatcattcaaatttcaaaggattgtttaataaattgaattttgatggattttgtagtat----------aattttaacaaaaaaaagtc 37328087  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| || |||||| || |||||||||||    
T  37328088 tttcatgaaaagataagattttttgagattgttttt 37328123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 17001106 - 17001036
Alignment:
Q  147 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgtttttt 217  Q
    ||||||| ||||| |||| || || |||||||||||||||||||| |||||||||||| | ||||||||||    
T  17001106 ggattttgtagtgtaattataacaagaaaaagtctttcatgaaaatatgagatttcttgatattgtttttt 17001036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 201
Target Start/End: Complemental strand, 44623357 - 44623295
Alignment:
Q  139 attttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagattt 201  Q
    ||||||||| |||||||||||||||||||| |||||||||||| |||| |||| |||| ||||    
T  44623357 attttgtggaattttctagtgaaattttagaatgaaaaagtctctcataaaaatatgatattt 44623295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 134
Target Start/End: Complemental strand, 17001152 - 17001099
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttg 134  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  |||||||    
T  17001152 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 17001099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 134
Target Start/End: Original strand, 47066775 - 47066828
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttg 134  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  |||||||    
T  47066775 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 47066828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 81 - 206
Target Start/End: Complemental strand, 33892379 - 33892264
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| ||| ||||||| |||||||  |||||| ||| ||||||          ||||| ||||||| || |||||||||    
T  33892379 gtggtattcaaaatcattcaaatttcgaatgattgttaaataaattggatttttatgaattttg----------tagtgtaattttaacaagaaaaagtc 33892290  T
Q  181 tttcatgaaaacatgagatttcttaa 206  Q
    |||||| |||| ||||||||| ||||    
T  33892289 tttcattaaaagatgagattttttaa 33892264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 145
Target Start/End: Original strand, 39028172 - 39028232
Alignment:
Q  85 tattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgt 145  Q
    ||||||||| | ||||||||  ||| |||||||||||||||  ||||||||||||||||||    
T  39028172 tattcaaaatcgttcaaattacgaaagattgtttaataaattggattttgatggattttgt 39028232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 216
Target Start/End: Original strand, 39028213 - 39028293
Alignment:
Q  136 tggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgttttt 216  Q
    |||||||||  ||||||| ||||| || |||| || |||||||| |||||||||||   |||||||||| |||||||||||    
T  39028213 tggattttgatggattttgtagtgtaactttaacaagaaaaagtttttcatgaaaaacagagatttcttgagattgttttt 39028293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 140
Target Start/End: Original strand, 447854 - 447913
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggat 140  Q
    |||||||| |||| ||||||||||| ||| ||||||||||| |||  |||||||||||||    
T  447854 gtggtatttaaaatcattcaaatttcgaatgattgtttaattaattggattttgatggat 447913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 204
Target Start/End: Original strand, 47066821 - 47066878
Alignment:
Q  147 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 204  Q
    ||||||| ||||| ||||||| || |||||| | ||||||||||| ||||||||||||    
T  47066821 ggattttgtagtgtaattttaacaagaaaaaatatttcatgaaaagatgagatttctt 47066878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 43863478 - 43863530
Alignment:
Q  184 catgaaaacatgagatttcttaagattgttttttcttttaagattttactatc 236  Q
    |||||||||||||||||||| |  |||||| |||| |||||||||||| ||||    
T  43863478 catgaaaacatgagatttctgagaattgttatttcatttaagattttattatc 43863530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 157; Significance: 1e-83; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 6197683 - 6197448
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||||||    |||||||||||| ||||||    
T  6197683 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcattca 6197588  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6197587 aatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 6197488  T
Q  201 tcttaagattgtt-ttttcttttaagattttactatctct 239  Q
    ||||| ||||||| ||||||||||||||||||||||||||    
T  6197487 tcttaggattgtttttttcttttaagattttactatctct 6197448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 1391624 - 1391859
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    |||||||||||| |||||||||       ||| |||||||||||||||||||||||||||||||       ||||||    |||||||||||| ||||||    
T  1391624 caatcaagattcattgtcatttaaataaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcattca 1391719  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1391720 aatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatgagatt 1391819  T
Q  201 tcttaagattgttttttc-ttttaagattttactatctct 239  Q
     |||| |||||||||||| |||||||||||||||||||||    
T  1391820 ccttaggattgttttttctttttaagattttactatctct 1391859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 2300943 - 2300709
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       ||| ||||||||||||||||||||||| |||||||       |||||     ||||||| |||| ||||||    
T  2300943 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttgatcacttaaaaaaagtctac----tggtattgaaaatcattca 2300848  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2300847 aatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 2300748  T
Q  201 tcttaagattgttttttcttttaagattttactatctct 239  Q
    ||||| |||| ||||||||||||| ||||||||||||||    
T  2300747 tcttaggatttttttttcttttaaaattttactatctct 2300709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 28002665 - 28002905
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||| ||||||||||       ||| | |||||||||||||||||||||||||||||       ||||||    || ||||||||| ||||||    
T  28002665 caatcaagattttttgtcatttaaaaaaagtcttctggtattcaatcaagactcttaatcacttaaaaaaagtctag----tgatattcaaaatcattca 28002760  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||   |    
T  28002761 aatttggaaggattgtttaataaatcagattttgatggattttgtgaaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaagct 28002860  T
Q  201 tcttaagattg-ttttttcttttaagattttactatctctgctcc 244  Q
    ||||| ||||| |||||||||||||||||||||||||||| ||||    
T  28002861 tcttaggattgtttttttcttttaagattttactatctctcctcc 28002905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 78 - 217
Target Start/End: Original strand, 29076672 - 29076811
Alignment:
Q  78 ctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaa 177  Q
    ||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  29076672 ctagtagtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttataggattttctagtgaaattttagcatgaaaaa 29076771  T
Q  178 gtctttcatgaaaacatgagatttcttaagattgtttttt 217  Q
     |||||||| |||||||||||||| ||| |||||||||||    
T  29076772 atctttcataaaaacatgagattttttaggattgtttttt 29076811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 78 - 217
Target Start/End: Original strand, 29111646 - 29111785
Alignment:
Q  78 ctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaa 177  Q
    ||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  29111646 ctagtagtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttataggattttctagtgaaattttagcatgaaaaa 29111745  T
Q  178 gtctttcatgaaaacatgagatttcttaagattgtttttt 217  Q
     |||||||| |||||||||||||| ||| |||||||||||    
T  29111746 atctttcataaaaacatgagattttttaggattgtttttt 29111785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 31895772 - 31895907
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||| || |||||||||    
T  31895772 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttctagtgtaattttaacaagaaaaagtc 31895871  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  31895872 tttcatgaaaagatgagatttcttgagattgttttt 31895907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 85 - 227
Target Start/End: Original strand, 7051925 - 7052067
Alignment:
Q  85 tattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttc 184  Q
    ||||||||| ||||||||||| |||||||||||||||||||  |||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||    
T  7051925 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtaggattttctagtaaaattttagcatgaaaaagtttttc 7052024  T
Q  185 atgaaaacatgagatttcttaagattgttttttcttttaagat 227  Q
    || ||| ||||||||||||||  ||||||||| || |||||||    
T  7052025 ataaaatcatgagatttcttagaattgtttttcctgttaagat 7052067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 14262562 - 14262427
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| |||| |||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  14262562 gtggtattcaaaatcatttaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 14262463  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| ||| |||||||| |||||||||||    
T  14262462 tttcatgaaaagatgggatttcttgagattgttttt 14262427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 34759179 - 34759044
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| |||||||||||  ||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||| ||    
T  34759179 gtggtattcaaaatcattcaaatttccaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatc 34759080  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| ||||| |||||    
T  34759079 tttcatgaaaagatgagatttcttgagattattttt 34759044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 81 - 204
Target Start/End: Original strand, 34773485 - 34773608
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||||  |||| ||||||| || |||||||||    
T  34773485 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgcagtgtaattttaacaagaaaaagtc 34773584  T
Q  181 tttcatgaaaacatgagatttctt 204  Q
    ||||||||||| ||||||||||||    
T  34773585 tttcatgaaaagatgagatttctt 34773608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 7497152 - 7497286
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| |||||| ||||||||||||  |||||||||||||||||| ||||||| ||||| ||||||| || |||||||||    
T  7497152 gtggtattcaaaatcattcaaatttcgaaggagtgtttaataaattggattttgatggattttgt-ggattttgtagtgtaattttaacaagaaaaagtc 7497250  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| ||||| |||||    
T  7497251 tttcatgaaaagatgagatttcttgagattattttt 7497286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 31067569 - 31067694
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||||    
T  31067569 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 31067658  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    |||||| |||| |||||||||||| |||||||||||    
T  31067659 tttcataaaaagatgagatttcttgagattgttttt 31067694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 30385186 - 30385063
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||          |||||||||||||||||| ||||| ||||||| ||  | ||||||    
T  30385186 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaaca--acaaagtc 30385099  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  30385098 tttcatgaaaagatgagatttcttgagattgttttt 30385063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 162 - 239
Target Start/End: Original strand, 2238668 - 2238747
Alignment:
Q  162 attttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattg--ttttttcttttaagattttactatctct 239  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||    
T  2238668 attttagtatgaaaaaatctttcatgaaaacatgagatttcttaagattgttttttttcttttaagattttactctctct 2238747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 96 - 216
Target Start/End: Complemental strand, 4200541 - 4200431
Alignment:
Q  96 attcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatg 195  Q
    |||||||||| |||||||||||||||||||  ||||||||||||||||||          |||| ||||||| || |||||||||||||||||||| |||    
T  4200541 attcaaatttcgaaggattgtttaataaattggattttgatggattttgt----------agtgtaattttaacaagaaaaagtctttcatgaaaagatg 4200452  T
Q  196 agatttcttaagattgttttt 216  Q
    ||||||||| |||||||||||    
T  4200451 agatttcttgagattgttttt 4200431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 183 - 239
Target Start/End: Original strand, 657114 - 657170
Alignment:
Q  183 tcatgaaaacatgagatttcttaagattgttttttcttttaagattttactatctct 239  Q
    |||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||    
T  657114 tcatgaaaacatgaaatttcttaggattgttttttcttttaaaattttactatctct 657170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 125
Target Start/End: Original strand, 3848286 - 3848330
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaat 125  Q
    ||||||||||||| |||| |||||||||| |||||||||||||||    
T  3848286 gtggtattcaaaatcatttaaattttgaatgattgtttaataaat 3848330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 210
Target Start/End: Complemental strand, 11113773 - 11113733
Alignment:
Q  170 atgaaaaagtctttcatgaaaacatgagatttcttaagatt 210  Q
    ||||||| |||||||||||||||||||||||||||| ||||    
T  11113773 atgaaaacgtctttcatgaaaacatgagatttcttaggatt 11113733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 64
Target Start/End: Original strand, 656998 - 657028
Alignment:
Q  34 tgtggtattcaatcaagactcttaatcactt 64  Q
    |||||||||||||||||||||||||||||||    
T  656998 tgtggtattcaatcaagactcttaatcactt 657028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 29076598 - 29076661
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcactt 64  Q
    ||||||||||||||||||||||       ||| |||||||||||||| ||| ||||||||||||    
T  29076598 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatctagattcttaatcactt 29076661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 29111571 - 29111634
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcactt 64  Q
    ||||||||||||||||||||||       ||| |||||||||||||| ||| ||||||||||||    
T  29111571 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatctagattcttaatcactt 29111634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 167
Target Start/End: Original strand, 657065 - 657113
Alignment:
Q  116 tttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 167  Q
    ||||||||||| |||| |||||||||||||||||||   |||||||||||||    
T  657065 tttaataaatctgattctgatggattttgtgggatt---tagtgaaatttta 657113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 7051847 - 7051908
Alignment:
Q  3 atcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcactt 64  Q
    ||||||||||||||||||||       ||| |||||||| |||||||||||||| |||||||    
T  7051847 atcaagattctttgtcatttaaaaaaagtcttgtggtatacaatcaagactcttcatcactt 7051908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 157; Significance: 1e-83; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 20498209 - 20498444
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||||||    |||||||||||| ||||||    
T  20498209 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcattca 20498304  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20498305 aatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 20498404  T
Q  201 tcttaagattg-ttttttcttttaagattttactatctct 239  Q
    ||||| ||||| ||||||||||||||||||||||||||||    
T  20498405 tcttaggattgtttttttcttttaagattttactatctct 20498444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 996292 - 996057
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||| ||||||       ||| |||||||||||||||||| ||||||||||||       ||||||    |||||||||||| ||||||    
T  996292 caatcaagattctttatcatttcaaaaaagtcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctag----tggtattcaaaatcattca 996197  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  996196 aatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 996097  T
Q  201 tcttaagattgtt-ttttcttttaagattttactatctct 239  Q
    ||||| ||||||| ||||||||||||||||||||||||||    
T  996096 tcttaggattgtttttttcttttaagattttactatctct 996057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 34 - 239
Target Start/End: Complemental strand, 10139319 - 10139117
Alignment:
Q  34 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagatttt 133  Q
    |||||||||||||||||||||||||||||||       ||||||    |||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  10139319 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 10139224  T
Q  134 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgtt-ttttcttttaagattttac 232  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  10139223 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttac 10139124  T
Q  233 tatctct 239  Q
    |||||||    
T  10139123 tatctct 10139117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 19253827 - 19254062
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||||||    |||||||||||| ||||||    
T  19253827 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcattca 19253922  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19253923 aatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 19254022  T
Q  201 tcttaagattg-ttttttcttttaagattttactatctct 239  Q
    ||||| ||||| ||||||||||||| ||||||||||||||    
T  19254023 tcttaggattgtttttttcttttaaaattttactatctct 19254062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 34 - 239
Target Start/End: Complemental strand, 3206378 - 3206176
Alignment:
Q  34 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagatttt 133  Q
    |||||||||||||||||||||||||||||||       ||||||    |||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  3206378 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 3206283  T
Q  134 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgtt-ttttcttttaagattttac 232  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  3206282 gatggattttgtgggattttctagtgaaattttagcaagaaaaagtctttcatgaaaacatgagatttcttatgattgtttttttcttttaagattttac 3206183  T
Q  233 tatctct 239  Q
    |||||||    
T  3206182 tatctct 3206176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 40246844 - 40247078
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       ||  |||||||||||||||||||| ||||||| ||       ||||||    |||||||||||| ||||||    
T  40246844 caatcaagattctttgtcatttaaaaaaagttttgtggtattcaatcaagactattaatcagttaaaaaaagtctag----tggtattcaaaatcattca 40246939  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  40246940 aatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatgagatt 40247039  T
Q  201 tcttaagattgttttttcttttaagattttactatctct 239  Q
     |||| |||||||||||||||||||||||||||||||||    
T  40247040 ccttatgattgttttttcttttaagattttactatctct 40247078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 37820683 - 37820450
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||        || |||||||||||||||||| ||||||||||||       ||||||    |||||||||||| ||||||    
T  37820683 caatcaagattctttgtcatttaaaaaaattcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctag----tggtattcaaaatcattca 37820588  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  37820587 aatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttccagtgaaattttagcatgaaaaagtctttcataaaaacatgagatt 37820488  T
Q  201 tcttaagattgtt-ttttcttttaagattttactatct 237  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  37820487 tcttaagattgtttttttcttttaagattttactatct 37820450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 3999851 - 3999616
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||        |||||    |||||||||||| ||||||    
T  3999851 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctag----tggtattcaaaatcattca 3999756  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  3999755 aatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagaatgaaaaagtctttcataaaaacatgagatt 3999656  T
Q  201 tcttaagattgtt-ttttcttttaagattttactatctct 239  Q
    ||||| ||||||| |||||||||||||||||| |||||||    
T  3999655 tcttaggattgtttttttcttttaagattttattatctct 3999616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 25418366 - 25418600
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       ||| |||||||||||||||||||| ||||||||||        ||||||    ||||||||||| ||||||    
T  25418366 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttacaaaaaatctagc----ggtattcaaaatcattca 25418461  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  25418462 aatttgaaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtatttcatgaaaacatgagatt 25418561  T
Q  201 tcttaagattgttttttcttttaagattttactatctct 239  Q
     |||| |||||||||||||||||||||||||||||||||    
T  25418562 ccttaggattgttttttcttttaagattttactatctct 25418600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 35337735 - 35337968
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    |||||||||||| |||||||||       ||| |||||||||||||||||||||||||||||||       ||||||    ||||||||||||  |||||    
T  35337735 caatcaagattccttgtcattttaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaaaaattca 35337830  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  35337831 aatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagt-tttcatgaaaacatgagatt 35337929  T
Q  201 tcttaagattg-ttttttcttttaagattttactatctct 239  Q
    | ||| ||||| ||||||||||||||||||||||||||||    
T  35337930 t-ttaggattgtttttttcttttaagattttactatctct 35337968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 44762243 - 44762006
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       ||||||| |||||||||||||||||||||||||||       ||||||    ||||||| ||||  |||||    
T  44762243 caatcaagattctttgtcatttaaaaaaagtcatgtagtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtatttaaaattattca 44762148  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    | ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  44762147 agtttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatt 44762048  T
Q  201 tcttaagattgtttttt---cttttaagattttactatctct 239  Q
    |||||||||||||||||    |||||||||||||||||||||    
T  44762047 tcttaagattgttttttttctttttaagattttactatctct 44762006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 34 - 239
Target Start/End: Original strand, 6589597 - 6589800
Alignment:
Q  34 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagatttt 133  Q
    |||||||||||||||||||||||||||| ||       ||||||    |||||||||||| ||||||||||| |||| ||| ||||||||||||||||||    
T  6589597 tgtggtattcaatcaagactcttaatcatttaaaaaaagtctag----tggtattcaaaatcattcaaatttcgaagaattatttaataaatcagatttt 6589692  T
Q  134 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgtttttt--cttttaagatttta 231  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||   |||||||||||||    
T  6589693 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttctttttaagatttta 6589792  T
Q  232 ctatctct 239  Q
    ||||||||    
T  6589793 ctatctct 6589800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 29449064 - 29448828
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    |||||||||||| |||||||||       ||| |||| ||||||||||||||||| ||||||||       ||||||    |||||||||||| ||||||    
T  29449064 caatcaagattccttgtcatttacaaaaagtcttgtgatattcaatcaagactctcaatcacttaaaaaaagtctag----tggtattcaaaatcattca 29448969  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  29448968 aatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcataaaaaagtctttcatgaaaacatgagatt 29448869  T
Q  201 tcttaagattgtttttt--cttttaagattttactatctct 239  Q
    ||||| |||||||||||   |||||||||||||||||||||    
T  29448868 tcttaggattgtttttttctttttaagattttactatctct 29448828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 38 - 239
Target Start/End: Original strand, 54625629 - 54625826
Alignment:
Q  38 gtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatg 137  Q
    |||||||||||||||||||||||||||       ||||||    ||||||||||||  |||||||||| |||||||||||||||||||||||||||||||    
T  54625629 gtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaattattcaaatttcgaaggattgtttaataaatcagattttgatg 54625724  T
Q  138 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattg-ttttttcttttaagattttactatc 236  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||    
T  54625725 gattttgtgggattttctagtgaaattttagcatgaaaaagtttttcatgaaaacatgagatttcttaagattgatttttgcttttaagatttt-ctatc 54625823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 33808005 - 33807796
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctag-ctagtggtattcaaaagcattc 99  Q
    |||| |||||||||||||||||       ||| |||||||||||||||||||||||||||||||           || |||||||||||||||| |||||    
T  33808005 caattaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaa----agtctagtggtattcaaaatcattc 33807910  T
Q  100 aaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagat 199  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33807909 aaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagat 33807810  T
Q  200 ttcttaagattgtt 213  Q
    |||||| |||||||    
T  33807809 ttcttaggattgtt 33807796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 53929334 - 53929099
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||||||    |||||||||||| |||| |    
T  53929334 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcattta 53929239  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||| | ||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  53929238 aatatcgaacgattgtttaataaataagattttgatggattttgtaggattttctagtgaaattttagcatgaaaaaatctttaatgaaaacatgagatt 53929139  T
Q  201 tcttaagattgtt-ttttcttttaagattttactatctct 239  Q
    | ||| ||||||| ||||||||||| ||||||||||||||    
T  53929138 ttttaggattgtttttttcttttaaaattttactatctct 53929099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 85 - 239
Target Start/End: Complemental strand, 6035179 - 6035026
Alignment:
Q  85 tattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttc 184  Q
    ||||||||| ||||||||||| |||| | |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  6035179 tattcaaaatcattcaaatttcgaagcaatgtttaataaattagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttc 6035080  T
Q  185 atgaaaacatgagatttcttaagattgttttttcttttaagattttactatctct 239  Q
    || ||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  6035079 ataaaaacatgagatttcttaagattgt-ttttcttttaaaattttactatctct 6035026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 33996747 - 33996547
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||        || ||    |||||||||||| ||||||    
T  33996747 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatccag----tggtattcaaaatcattca 33996652  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  33996651 aatttcgaaggattgtttaataaatcagattttgatggattttgagggattttctagtgaaattttagcatgaaaaagtcttttataaaaacatgagatt 33996552  T
Q  201 tctta 205  Q
    |||||    
T  33996551 tctta 33996547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 123 - 239
Target Start/End: Complemental strand, 6131321 - 6131205
Alignment:
Q  123 aatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgttttttctttt 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  6131321 aatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgttttttctttt 6131222  T
Q  223 aagattttactatctct 239  Q
    |||||||||||||||||    
T  6131221 aagattttactatctct 6131205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 82 - 219
Target Start/End: Original strand, 5825139 - 5825276
Alignment:
Q  82 tggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtct 181  Q
    |||||||||||| |||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||| |||||||||| ||||||||||||| ||    
T  5825139 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatagattttgtgggattttttagtgaaattctagcatgaaaaaggct 5825238  T
Q  182 ttcatgaaaacatgagatttcttaagattgttttttct 219  Q
    |||||||||||||||||||||||| |||||||||||||    
T  5825239 ttcatgaaaacatgagatttcttatgattgttttttct 5825276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 78 - 238
Target Start/End: Original strand, 52114602 - 52114763
Alignment:
Q  78 ctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaa 177  Q
    ||||||||||||||||  |||||||||| | |||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||    
T  52114602 ctagtggtattcaaaataattcaaatttcgcaggattgtttaataaatcagattttgatagattttgtggaattttctagtaaaattttagcatgaaaaa 52114701  T
Q  178 gtctttcatgaaaacatgagatttcttaagatt-gttttttcttttaagattttactatctc 238  Q
     |||||  |||||||||||||||||||| ||||  |||||||||||||||||||||||||||    
T  52114702 atcttttgtgaaaacatgagatttcttaggattatttttttcttttaagattttactatctc 52114763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 36674260 - 36674125
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  36674260 gtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 36674161  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  36674160 tttcatgaaaagatgagatttcttgagattgttttt 36674125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 51699685 - 51699495
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||        || |||||||||||||||||||||||||||||||           | |||||||||||||||| ||||||    
T  51699685 caatcaagattctttgtcatttaaaaaaaatcttgtggtattcaatcaagactcttaatcacttaaaaaa-----atctagtggtattcaaaatcattca 51699591  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 196  Q
    ||||| ||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||    
T  51699590 aatttcgaaggattggttaataaataagattttgatgaattttgtgggattttctagtgaaattttagcatgaaaaaatctttcgtgaaaacatga 51699495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 18749688 - 18749823
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  18749688 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 18749787  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  18749788 tttcatgaaaagatgagatttcttgagattgttttt 18749823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 32580252 - 32580387
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  ||||||||||||||||| |||||||| ||||| ||||||| || |||||||||    
T  32580252 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgagggattttgtagtgtaattttaacaagaaaaagtc 32580351  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  32580352 tttcatgaaaagatgagatttcttgagattgttttt 32580387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 34484160 - 34484025
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||| ||    
T  34484160 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatc 34484061  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  34484060 tttcatgaaaagatgagatttcttgagattgttttt 34484025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 100 - 239
Target Start/End: Complemental strand, 1440005 - 1439864
Alignment:
Q  100 aaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagat 199  Q
    |||||| ||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||| | |||||||||||||||| |||||||||||||    
T  1440005 aaatttggaaggattgtttaataaattagattttgatagattttgtgggattttctagtaaaattttggtatgaaaaagtctttcacgaaaacatgagat 1439906  T
Q  200 ttcttaagattgtttttt--cttttaagattttactatctct 239  Q
    || ||| |||||||||||   |||||||||||||||||||||    
T  1439905 tttttaggattgtttttttctttttaagattttactatctct 1439864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 82 - 216
Target Start/End: Original strand, 40897221 - 40897355
Alignment:
Q  82 tggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtct 181  Q
    |||||||||||| ||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||||||||    
T  40897221 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttatagtgtaattttaacaagaaaaagtct 40897320  T
Q  182 ttcatgaaaacatgagatttcttaagattgttttt 216  Q
    |||||||||| |||||||||||| | |||||||||    
T  40897321 ttcatgaaaagatgagatttcttgatattgttttt 40897355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 81 - 222
Target Start/End: Original strand, 29030081 - 29030222
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||    |     
T  29030081 gtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtggaattttctaatgaaattttaacatgaatttttt 29030180  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttttctttt 222  Q
    ||| ||||||||||||||||||| || ||| |||||||||||    
T  29030181 ttttatgaaaacatgagatttctaaaaattattttttctttt 29030222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 17946288 - 17946499
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       ||| || ||||||||||||||||| || |||||||       |||| |    || ||||||||| ||||||    
T  17946288 caatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcg----tgatattcaaaatcattca 17946383  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    |||||  ||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||    
T  17946384 aatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatt 17946483  T
Q  201 tcttaagattgttttt 216  Q
    |||| |||||||||||    
T  17946484 tcttgagattgttttt 17946499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 81 - 239
Target Start/End: Original strand, 27899420 - 27899566
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||          | ||||||||||||||||||||||||||||||||||    
T  27899420 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg----------taggattttctagtgaaattttagcatgaaaaagtc 27899509  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttttcttttaagattttactatctct 239  Q
    |||||||||||||||| |||||||| ||||||||||||  ||||||||||||| |||||    
T  27899510 tttcatgaaaacatgaaatttcttatgattgttttttc--ttaagattttactctctct 27899566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 11431602 - 11431737
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| |||| |||||| |||||||||||||||||||  ||||||| |||||||||||||||||| ||||| ||||||| || |||||||||    
T  11431602 gtggtattcaaaatcatttaaatttcgaaggattgtttaataaattggattttggtggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 11431701  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  11431702 tttcatgaaaagatgagatttcttgagattgttttt 11431737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 44906643 - 44906508
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  |||||||||| ||||||||||||||| ||||| ||||||| || ||||| |||    
T  44906643 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagaaaatgtc 44906544  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  44906543 tttcatgaaaagatgagatttcttgagattgttttt 44906508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 54628920 - 54629055
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| |||||||||||  ||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  54628920 gtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 54629019  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    |||||| |||| |||||||||||| |||||||||||    
T  54629020 tttcataaaaagatgagatttcttgagattgttttt 54629055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 26107337 - 26107472
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  ||||||||||||||||||| |||||| ||||| ||||||| || ||||||||     
T  26107337 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgtgattttgtagtgtaattttaacaagaaaaagta 26107436  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    |||||| |||| |||||||||||| |||||||||||    
T  26107437 tttcataaaaagatgagatttcttgagattgttttt 26107472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 50903370 - 50903235
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||  |||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||| ||    
T  50903370 gtggtattcaaaatcattcaaattaagaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatc 50903271  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||| ||||||| |||||||||||| |||||||||||    
T  50903270 ttttatgaaaatatgagatttcttgagattgttttt 50903235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 52810454 - 52810589
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||   ||||||||||||||||||||||||| ||| | ||||||| || |||||| ||    
T  52810454 gtggtattcaaaatcattcaaattttgaatgattgtttaataaattgaattttgatggattttgtgggattttgtagcgtaattttaacaagaaaaaatc 52810553  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  52810554 tttcatgaaaagatgagatttcttgagattgttttt 52810589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 81 - 239
Target Start/End: Original strand, 48379233 - 48379389
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||   ||||||||||||||||||||||||| ||||| |||||||  | ||||| |||    
T  48379233 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaataagaaaatgtc 48379332  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttttcttttaagattttactatctct 239  Q
    ||||||||||| || ||||||||| |||||| |||||||||||| || |||||||||||    
T  48379333 tttcatgaaaagatcagatttcttgagattg-tttttcttttaa-atgttactatctct 48379389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 78 - 239
Target Start/End: Original strand, 52080000 - 52080147
Alignment:
Q  78 ctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaa 177  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||          ||||||||||||||||||| ||||||||||||||||||||    
T  52080000 ctagtggtattcaaaatcattcaaattttgaaggattgtttaataaatca----------gattttgtgggattttctaatgaaattttagcatgaaaaa 52080089  T
Q  178 gtctttcatgaaaacatgagatttcttaagattg--ttttttcttttaagattttactatctct 239  Q
    ||      |||||||||||||||||||| |||||  ||||||||||||||||||||||||||||    
T  52080090 gt------tgaaaacatgagatttcttaggattgttttttttcttttaagattttactatctct 52080147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 78 - 176
Target Start/End: Original strand, 22057835 - 22057933
Alignment:
Q  78 ctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaa 176  Q
    ||||||||||| |||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  22057835 ctagtggtatttaaaatcattcaaatttcgatggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaacatgaaaa 22057933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 81 - 213
Target Start/End: Complemental strand, 31646414 - 31646284
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| ||| ||||||||||| |||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  31646414 gtggtattcaaaatcattcaaatttcgaaagattgtttaatgaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 31646315  T
Q  181 tttcatgaaaacatgagatttcttaagattgtt 213  Q
    ||||||||||  |||||||||||| ||||||||    
T  31646314 tttcatgaaa--atgagatttcttgagattgtt 31646284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 51737856 - 51737721
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| | ||| ||||||| || |||||||||    
T  51737856 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgttgtgtaattttaacaagaaaaagtc 51737757  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    |||||| |||| || ||  ||||| |||||||||||    
T  51737756 tttcataaaaagataagtattcttgagattgttttt 51737721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 52618095 - 52617966
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||      || |||||    
T  52618095 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttt------aacaagtc 52618002  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    |||||| |||| |||||||||||| |||||||||||    
T  52618001 tttcataaaaagatgagatttcttgagattgttttt 52617966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 34 - 157
Target Start/End: Complemental strand, 1440125 - 1440006
Alignment:
Q  34 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagatttt 133  Q
    |||||||||||||||||||||||||||||||       ||||||    |||||||||||| |||||||||||  ||||||||||||||||||||||||||    
T  1440125 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcattcaaatttccaaggattgtttaataaatcagatttt 1440030  T
Q  134 gatggattttgtgggattttctag 157  Q
    |||||||||| |||||||||||||    
T  1440029 gatggattttatgggattttctag 1440006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 81 - 200
Target Start/End: Original strand, 20833068 - 20833187
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||  |||||||||||||||||||  ||||||||||||||||||| |||||  ||||| ||||||| || ||||||||     
T  20833068 gtggtattcaaaatcattcaaattcggaaggattgtttaataaattggattttgatggattttgtgagatttattagtgtaattttaacaagaaaaagta 20833167  T
Q  181 tttcatgaaaacatgagatt 200  Q
    ||||||||||| || |||||    
T  20833168 tttcatgaaaagataagatt 20833187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 10728771 - 10728646
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    |||||||| |||| ||||||||||| |||||||||||||||||||  ||||||||||||||||||          |||| ||||||| || |||||||||    
T  10728771 gtggtatttaaaatcattcaaatttggaaggattgtttaataaattggattttgatggattttgt----------agtgtaattttaacaagaaaaagtc 10728682  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  10728681 tttcatgaaaagatgagatttcttgagattgttttt 10728646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 37454937 - 37455062
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| ||| |||||||||||||||          || ||||||||||||||| ||||| ||||||| || ||||||||     
T  37454937 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaat----------tgaattttgtgggattttgtagtgtaattttaacaagaaaaagta 37455026  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  37455027 tttcatgaaaagatgagatttcttgagattgttttt 37455062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 85 - 179
Target Start/End: Original strand, 55235264 - 55235359
Alignment:
Q  85 tattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatgga-ttttgtgggattttctagtgaaattttagcatgaaaaagt 179  Q
    ||||||||| ||||||||||| ||| |||||||||||||||  | |||||||||| ||||||||||||||||| |||||||||||||| |||||||    
T  55235264 tattcaaaatcattcaaatttcgaaagattgtttaataaattggtttttgatggatttttgtgggattttctaatgaaattttagcataaaaaagt 55235359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 50762180 - 50762055
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||| ||||| ||| |||||||| ||||||  ||||||||||||||||||          |||| ||||||| || |||||||||    
T  50762180 gtggtattcaaaatcattctaatttcgaatgattgtttgataaattggattttgatggattttgt----------agtgtaattttaacaagaaaaagtc 50762091  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  50762090 tttcatgaaaagatgagatttcttgagattgttttt 50762055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 158 - 213
Target Start/End: Complemental strand, 33807733 - 33807678
Alignment:
Q  158 tgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgtt 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  33807733 tgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtt 33807678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 44276506 - 44276604
Alignment:
Q  136 tggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgttttttcttttaagattttactat 235  Q
    |||||||||||||||||||||||||||||||| || |||||| ||||||||||| ||||||||||| ||  ||||  |||||||||||| | ||||||||    
T  44276506 tggattttgtgggattttctagtgaaattttaacaagaaaaaatctttcatgaagacatgagattttttgggatt-atttttcttttaaaagtttactat 44276604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 81 - 249
Target Start/End: Original strand, 39038116 - 39038272
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||| ||||| ||||||||||| |||| ||||||||||||||  ||||||||||||||||||          |||| ||||||| || |||||||||    
T  39038116 gtggtatccaaaatcattcaaatttcgaagaattgtttaataaattggattttgatggattttgt----------agtgtaattttaacaagaaaaagtc 39038205  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttttcttttaagattttactatctctgctcctcctc 249  Q
    |||||| |||| |||||||||||| | |||| |||||||||||| |  ||||||||||| || ||||||    
T  39038206 tttcataaaaagatgagatttcttgaaattg-tttttcttttaa-aagttactatctcttcttctcctc 39038272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 145
Target Start/End: Original strand, 10660611 - 10660675
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgt 145  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  ||||||||||||||||||    
T  10660611 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 10660675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 85 - 216
Target Start/End: Complemental strand, 39842610 - 39842489
Alignment:
Q  85 tattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttc 184  Q
    ||||||||| ||||||||||| |||| |||||||||||||| ||||||||| ||||||||          || || ||||||| || |||||||||||||    
T  39842610 tattcaaaatcattcaaatttcgaagaattgtttaataaattagattttgacggattttg----------taatgtaattttaacaagaaaaagtctttc 39842521  T
Q  185 atgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||| ||||||||||||  ||||||||||    
T  39842520 atgaaaagatgagatttcttgggattgttttt 39842489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 136 - 237
Target Start/End: Complemental strand, 15492942 - 15492842
Alignment:
Q  136 tggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgttttttcttttaagattttactat 235  Q
    |||||||||| |||| |||||||||||||||| || |||||| |||||||||||  ||| ||||||||| ||||||| |||| |||||| | ||||||||    
T  15492942 tggattttgtaggatattctagtgaaattttaacaagaaaaaatctttcatgaagtcataagatttcttgagattgt-ttttattttaaaagtttactat 15492844  T
Q  236 ct 237  Q
    ||    
T  15492843 ct 15492842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 147 - 216
Target Start/End: Original strand, 45862983 - 45863052
Alignment:
Q  147 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||| ||||| ||||||| || |||||||||||||||||||| |||||||||||| |||||||||||    
T  45862983 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 45863052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 136 - 193
Target Start/End: Original strand, 6975867 - 6975924
Alignment:
Q  136 tggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaaca 193  Q
    |||| |||||||||||||||||| |||||| ||||||||| |||||||||||||||||    
T  6975867 tggaatttgtgggattttctagtaaaatttgagcatgaaacagtctttcatgaaaaca 6975924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 139
Target Start/End: Complemental strand, 539534 - 539476
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatgga 139  Q
    ||||||||||||| ||||||||||| |||||||| ||||||||||  ||||||||||||    
T  539534 gtggtattcaaaatcattcaaatttcgaaggattatttaataaattggattttgatgga 539476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 23753470 - 23753402
Alignment:
Q  147 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||| ||||| ||||||| || |||||||||||||||| ||| |||||||||||| |||||||||||    
T  23753470 ggattttgtagtgtaattttaacaagaaaaagtctttcatg-aaagatgagatttcttgagattgttttt 23753402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 134
Target Start/End: Complemental strand, 23753516 - 23753463
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttg 134  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  |||||||    
T  23753516 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 23753463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 203
Target Start/End: Original strand, 12103733 - 12103789
Alignment:
Q  148 gattttctagtgaaattttagcatgaaaaagtctttcatgaaaaca-tgagatttct 203  Q
    |||||||||||||||||||| || ||| |||||||||||||| ||| ||||||||||    
T  12103733 gattttctagtgaaattttaacaagaataagtctttcatgaagacattgagatttct 12103789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 132
Target Start/End: Complemental strand, 23535941 - 23535890
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattt 132  Q
    ||||||||||||| ||||||||||| ||||||| ||||||| ||| ||||||    
T  23535941 gtggtattcaaaatcattcaaatttagaaggatcgtttaattaattagattt 23535890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 64
Target Start/End: Original strand, 29030039 - 29030069
Alignment:
Q  34 tgtggtattcaatcaagactcttaatcactt 64  Q
    |||||||||||||||||||||||||||||||    
T  29030039 tgtggtattcaatcaagactcttaatcactt 29030069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 52114532 - 52114591
Alignment:
Q  5 caagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcactt 64  Q
    ||||||||||||||||||       ||| |||||||||||||||||||| ||||||||||    
T  52114532 caagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcactt 52114591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 153; Significance: 3e-81; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 24502018 - 24501783
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||| ||||||       ||| |||||||||||||||||||||||||||||||       ||||||    |||||||||||| ||||||    
T  24502018 caatcaagattctttatcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcattca 24501923  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24501922 aatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 24501823  T
Q  201 tcttaagattgtt-ttttcttttaagattttactatctct 239  Q
    ||||| ||||||| ||||||||||||||||||||||||||    
T  24501822 tcttaggattgtttttttcttttaagattttactatctct 24501783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 34 - 239
Target Start/End: Complemental strand, 7507071 - 7506869
Alignment:
Q  34 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagatttt 133  Q
    |||||||||||||||||||||||||||||||       ||||||    |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  7507071 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaaccattcaaattttgaaggattgtttaataaatcagatttt 7506976  T
Q  134 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgtt-ttttcttttaagattttac 232  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||    
T  7506975 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgtaaacatgagatttcttaggattgtttttttcttttaagattttac 7506876  T
Q  233 tatctct 239  Q
    |||||||    
T  7506875 tatctct 7506869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 26374635 - 26374400
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||||||    |||||||||||| ||||||    
T  26374635 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcattca 26374540  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26374539 aatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 26374440  T
Q  201 tcttaagattgtt-ttttcttttaagattttactatctct 239  Q
    ||||| ||||||| ||||||||||| ||||||||||||||    
T  26374439 tcttaggattgtttttttcttttaaaattttactatctct 26374400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 2705024 - 2704789
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||||||    |||||||||||| ||||||    
T  2705024 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcattca 2704929  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  2704928 aatttcgaatgattgtttaataaatcaaattttgatggattttgtgggattttctagtgatattttagcatgaaaaagtctttcatgaaaacatgagatt 2704829  T
Q  201 tcttaagattgtt-ttttcttttaagattttactatctct 239  Q
    ||||| ||||||| ||||||||||||||||||||||||||    
T  2704828 tcttaggattgtttttttcttttaagattttactatctct 2704789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 231
Target Start/End: Complemental strand, 42938322 - 42938095
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||| ||||||||||       ||| |||||||||||||||||||||||||||||||       ||||||    |||||||||||| ||||||    
T  42938322 caatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcattca 42938227  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  42938226 aatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcctgaaaaagtctttcatgaaaacatgagatt 42938127  T
Q  201 tcttaagattgtt-ttttcttttaagatttta 231  Q
    ||||| ||||||| ||||||||||||||||||    
T  42938126 tcttaggattgtttttttcttttaagatttta 42938095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 78 - 239
Target Start/End: Original strand, 42937425 - 42937587
Alignment:
Q  78 ctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaa 177  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  42937425 ctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcattaaaaa 42937524  T
Q  178 gtctttcatgaaaacatgagatttcttaagattg-ttttttcttttaagattttactatctct 239  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  42937525 gtctttcatgaaaacatgagatttcttatgattgtttttttcttttaagattttactatctct 42937587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 23115373 - 23115140
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||||||    |||||||||||  ||||||    
T  23115373 caatcaagattctttgtcatttaaaaaatgtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaat-cattca 23115279  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  23115278 aatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttggcatgaaaaagtctttcatgaaaacatgagatt 23115179  T
Q  201 tcttaagattgttttttcttttaagattttactatctct 239  Q
     |||| ||||||||||||||||||||| || ||||||||    
T  23115178 ccttaggattgttttttcttttaagatgttgctatctct 23115140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 5576826 - 5576590
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctag-ctagtggtattcaaaagcattc 99  Q
    ||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||           || | |||||||||||||| |||||    
T  5576826 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaa----agtcaagtggtattcaaaatcattc 5576731  T
Q  100 aaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagat 199  Q
    |||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  5576730 aaatttcgaagaattgtttaataaaccagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatgagat 5576631  T
Q  200 ttcttaagattgtttttt-cttttaagattttactatctct 239  Q
    |||||| ||||||||||| ||||||||||||||||||||||    
T  5576630 ttcttaggattgttttttccttttaagattttactatctct 5576590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 34 - 239
Target Start/End: Complemental strand, 42735449 - 42735247
Alignment:
Q  34 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagatttt 133  Q
    ||||||||||||| |||||||||||||||||       ||||||    |||||||||||| ||||||||||| |||| ||||||||||||||||||||||    
T  42735449 tgtggtattcaattaagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcattcaaatttcgaagtattgtttaataaatcagatttt 42735354  T
Q  134 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgtt-ttttcttttaagattttac 232  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||    
T  42735353 gatggattttgtgggattttctagtgaaattttagcttgaaaaagtctttcataaaaacatgagatttcttaggattgtttttttcttttaagattttac 42735254  T
Q  233 tatctct 239  Q
    |||||||    
T  42735253 tatctct 42735247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 230
Target Start/End: Complemental strand, 10392442 - 10392217
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||        || |||| ||||||||||||||| ||||||||||       ||||||    ||||||||| || ||||||    
T  10392442 caatcaagattctttgtcattttaaaaaattcttgtgatattcaatcaagacttttaatcacttaagaaaagtctag----tggtattcagaatcattca 10392347  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  10392346 aatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatctttcatgaaaacatgagatt 10392247  T
Q  201 tcttaagattgttttttcttttaagatttt 230  Q
    | ||| |||| |||||||||||||||||||    
T  10392246 tattaggatttttttttcttttaagatttt 10392217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 41479098 - 41479323
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||       |||||     |||||||||||| ||||||    
T  41479098 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctaa----tggtattcaaaatcattca 41479193  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| ||| |||||||||||||||||||||          ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  41479194 aatttcgaatgattgtttaataaatcagatt----------ttgtgggattttctagtaaaattttagcatgaaaaaatctttcatgaaaacatgagatt 41479283  T
Q  201 tcttaagattg-ttttttcttttaagattttactatctct 239  Q
    ||||| ||||| ||||||||||||||||||||||||||||    
T  41479284 tcttaggattgtttttttcttttaagattttactatctct 41479323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 14782264 - 14782129
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  14782264 gtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 14782165  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  14782164 tttcatgaaaagatgagatttcttgagattgttttt 14782129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 44725939 - 44725804
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  44725939 gtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 44725840  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  44725839 tttcatgaaaagatgagatttcttgagattgttttt 44725804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 78 - 239
Target Start/End: Original strand, 43959731 - 43959883
Alignment:
Q  78 ctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaa 177  Q
    |||||||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||    
T  43959731 ctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtgg----------tgaaattttagcatgaaaaa 43959820  T
Q  178 gtctttcatgaaaacatgagatttcttaagattg-ttttttcttttaagattttactatctct 239  Q
    |||||| || |||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  43959821 gtctttaattaaaacatgagatttcttatgattgtttttttcttttaagattttactatctct 43959883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 81 - 224
Target Start/End: Complemental strand, 10295510 - 10295366
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggatttt-gtgggattttctagtgaaattttagcatgaaaaagt 179  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  |||||||||||||||| |||||||||| ||||| ||||||| || ||||||||    
T  10295510 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatttttgtgggattttgtagtgtaattttaacaagaaaaagt 10295411  T
Q  180 ctttcatgaaaacatgagatttcttaagattgttttttcttttaa 224  Q
    |||||||||||| |||||||||||| |||||||||||| ||||||    
T  10295410 ctttcatgaaaagatgagatttcttgagattgtttttttttttaa 10295366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 9288586 - 9288451
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  |||||||||| ||||||||||||||| ||||| ||||||| || |||||||||    
T  9288586 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagaaaaagtc 9288487  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  9288486 tttcatgaaaagatgagatttcttgagattgttttt 9288451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 83 - 231
Target Start/End: Complemental strand, 4950143 - 4949995
Alignment:
Q  83 ggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctt 182  Q
    ||||||||||| ||||||| |||  || |||| |||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||| | ||    
T  4950143 ggtattcaaaatcattcaagtttcaaaagattatttaataaattagattttgatggaatttgtggaattttctagtgaaattttagcatgaaaaaatatt 4950044  T
Q  183 tcatgaaaacatgagatttcttaagattgttttttcttttaagatttta 231  Q
    ||||| |||||| ||||||||||| ||||||||||||||||| ||||||    
T  4950043 tcatgcaaacataagatttcttaaaattgttttttcttttaaaatttta 4949995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 4403184 - 4403319
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  | |||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  4403184 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgggttttgatggattttgtgggattttttagtgtaattttaacaagaaaaagtc 4403283  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| ||||||||||||  ||||||||||    
T  4403284 tttcatgaaaatatgagatttcttgggattgttttt 4403319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 18958856 - 18958721
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  |||||| ||||||||||||||||||| ||||| ||||||| || |||||||||    
T  18958856 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttaatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 18958757  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| || |||||| || |||||||||||    
T  18958756 tttcatgaaaagattagattttttgagattgttttt 18958721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 19718010 - 19717875
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| |||| ||||||||||||||  |||||| ||||||||||||||||||| ||||| ||||||| || |||||||||    
T  19718010 gtggtattcaaaatcattcaaatttcgaagaattgtttaataaattggattttaatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 19717911  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||| ||||||| |||||||||||| |||||||||||    
T  19717910 ttttatgaaaagatgagatttcttgagattgttttt 19717875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 43166819 - 43166684
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| | ||| ||||||| || ||||||||     
T  43166819 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgttgtgtaattttaacaagaaaaagtt 43166720  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||| ||||    
T  43166719 tttcatgaaaagatgagatttcttgagattggtttt 43166684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 26856144 - 26856279
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| |||| ||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  26856144 gtggtattcaaaatcattcaaatttcgaagtattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 26856243  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    |||||  |||| || ||||||||| |||||||||||    
T  26856244 tttcagaaaaaaataagatttcttgagattgttttt 26856279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 39467597 - 39467462
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||   ||||||||||||||| ||||||||| ||||| ||||||| || |||||| ||    
T  39467597 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaaatc 39467498  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| ||||||||| || |||||||||||    
T  39467497 tttcatgaaaagatgagattttttgagattgttttt 39467462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 84 - 239
Target Start/End: Complemental strand, 39189940 - 39189788
Alignment:
Q  84 gtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtcttt 183  Q
    |||||||| | ||||||||||| |||||||||||||||||||  || ||||||||||||||  | |||||||||| |||||||| || |||||| |||||    
T  39189940 gtattcaacatcattcaaatttcgaaggattgtttaataaatt-gaatttgatggattttgatgaattttctagt-aaattttaacaagaaaaaatcttt 39189843  T
Q  184 catgaaaacatgagatttcttaagattgttttttcttttaagattttactatctct 239  Q
    |||||||||||||||||||||  ||||| |||||||||||| | ||||||||||||    
T  39189842 catgaaaacatgagatttcttgggattg-tttttcttttaaaagtttactatctct 39189788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 84 - 240
Target Start/End: Complemental strand, 13478376 - 13478220
Alignment:
Q  84 gtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtcttt 183  Q
    |||||||||| | || |||||| ||||||||||||||||||| |||||| | |||||||||| ||||||| |||  |||||||||||||| |||||||||    
T  13478376 gtattcaaaatcttttaaatttcgaaggattgtttaataaattagatttcgttggattttgtaggattttttagctaaattttagcatgataaagtcttt 13478277  T
Q  184 catg-aaaacatgagatttcttaagattgttttttcttttaagattttactatctctg 240  Q
     ||| ||||||| |||||| |||  | | |||||||||||||||||||||||||||||    
T  13478276 tatgaaaaacataagattttttataact-ttttttcttttaagattttactatctctg 13478220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 7466412 - 7466537
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||||    
T  7466412 gtggtattcaaaatcattcaaattttgaagaattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 7466501  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  7466502 tttcatgaaaagatgagatttcttgagattgttttt 7466537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 81 - 213
Target Start/End: Complemental strand, 18306090 - 18305968
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| ||| |||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||||    
T  18306090 gtggtattcaaaatcattcaaatttcgaaagattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 18306001  T
Q  181 tttcatgaaaacatgagatttcttaagattgtt 213  Q
    ||||||||||| |||||||||||| ||||||||    
T  18306000 tttcatgaaaagatgagatttcttgagattgtt 18305968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 32711487 - 32711305
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||||||    |||||||||||| |||| |    
T  32711487 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcattta 32711392  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagat 199  Q
    ||||| |||||||||||||||||||||||||||| ||||             |||| |||||||||||||||||||||||||||||||||||| |||||    
T  32711391 aatttcgaaggattgtttaataaatcagattttg-tgga-----------aatctattgaaattttagcatgaaaaagtctttcatgaaaacaagagat 32711305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 32497602 - 32497727
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| ||| |||||||||||||||          |||||||||||||||||| ||||| ||||||| || || ||||||    
T  32497602 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagagaaagtc 32497691  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  32497692 tttcatgaaaagatgagatttcttgagattgttttt 32497727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 82 - 190
Target Start/End: Complemental strand, 8410526 - 8410416
Alignment:
Q  82 tggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtggga--ttttctagtgaaattttagcatgaaaaagt 179  Q
    |||||||||||| |||| |||||| ||||||||||||| |||||  || |||||||||||||||||||  |||| |||||||||||||| |||| |||||    
T  8410526 tggtattcaaaatcattgaaatttggaaggattgtttactaaattggactttgatggattttgtgggattttttttagtgaaattttagtatgacaaagt 8410427  T
Q  180 ctttcatgaaa 190  Q
    |||||| ||||    
T  8410426 ctttcacgaaa 8410416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 16362273 - 16362398
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  |||||||||||||||||          ||||| ||||||| || |||||| ||    
T  16362273 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttg----------tagtgtaattttaacaagaaaaaatc 16362362  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||| || |||| |||||||||||| |||||||||||    
T  16362363 ttttataaaaagatgagatttcttgagattgttttt 16362398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 37857196 - 37857321
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||  |||||||||||| ||||||||||||||||||  |||||||||||||||||          ||||| ||||| | || |||||| ||    
T  37857196 gtggtattcaaattcattcaaattttaaaggattgtttaataaattggattttgatggattttg----------tagtgtaatttgaacaagaaaaaatc 37857285  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  37857286 tttcatgaaaagatgagatttcttgagattgttttt 37857321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 42305914 - 42305789
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    |||||||||||||  |||||||||| ||||||||||||||| |||  |||||| |||||||||||          |||| ||||||| || |||||||||    
T  42305914 gtggtattcaaaataattcaaatttcgaaggattgtttaatcaattggattttaatggattttgt----------agtgtaattttaacaagaaaaagtc 42305825  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
     |||||||||| |||||||||||| |||||||||||    
T  42305824 attcatgaaaaaatgagatttcttgagattgttttt 42305789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 134
Target Start/End: Complemental strand, 4031387 - 4031334
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttg 134  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  |||||||    
T  4031387 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 4031334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 9770503 - 9770434
Alignment:
Q  147 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgttttt 216  Q
    |||||||||| |||||||||| ||| ||||| | |||||| |||||||||||||||||| ||||| ||||    
T  9770503 ggattttctaatgaaattttaacataaaaaaatatttcatcaaaacatgagatttcttaggattgctttt 9770434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 134
Target Start/End: Original strand, 31623772 - 31623825
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttg 134  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  |||||||    
T  31623772 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 31623825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 216
Target Start/End: Original strand, 31623818 - 31623887
Alignment:
Q  147 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||| ||||| ||||||| || |||||||| ||||||||||| || ||||||||| |||||||||||    
T  31623818 ggattttgtagtgtaattttaacaagaaaaagtttttcatgaaaagataagatttcttgagattgttttt 31623887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 239
Target Start/End: Complemental strand, 14028294 - 14028243
Alignment:
Q  188 aaaacatgagatttcttaagattgttttttcttttaagattttactatctct 239  Q
    ||||||||| |||||||  ||||||| ||| |||||||||||||||||||||    
T  14028294 aaaacatgatatttctttggattgttatttattttaagattttactatctct 14028243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 191
Target Start/End: Complemental strand, 4031341 - 4031297
Alignment:
Q  147 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 191  Q
    ||||||| ||||| ||||||| || ||||||||||||||||||||    
T  4031341 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 4031297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 153; Significance: 3e-81; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 55302843 - 55303082
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||       ||||||    |||||||||||| ||||||    
T  55302843 caatcaagattctttgtcattttaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcattca 55302938  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55302939 aatttcgaaggattgtttaataaatcagattttgatggatattgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 55303038  T
Q  201 tcttaagattg-----ttttttcttttaagattttactatctct 239  Q
    |||||||||||     ||||||||||||||||||||||||||||    
T  55303039 tcttaagattgttgttttttttcttttaagattttactatctct 55303082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 25331131 - 25331366
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||||||    || ||||||||| ||||||    
T  25331131 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tgatattcaaaatcattca 25331226  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25331227 aatttcaaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 25331326  T
Q  201 tcttaagattg-ttttttcttttaagattttactatctct 239  Q
    ||||| ||||| ||||||||||||||||||||||||||||    
T  25331327 tcttaggattgtttttttcttttaagattttactatctct 25331366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 32951042 - 32950806
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||| ||||||||||       |||||||||||||||||||||||||||||||||||       ||||||    |||||||||||| ||||||    
T  32951042 caatcaagattatttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcattca 32950947  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  32950946 aatttcgaaggattgtttaataaatcagattttgatgaattttgtgggattttctagtgaaattttagcatgaaaaattctttcatgaaaacatgagatt 32950847  T
Q  201 tcttaaga--ttgttttttcttttaagattttactatctct 239  Q
    ||||||||  || ||||||||||||||||||||||||||||    
T  32950846 tcttaagatttttttttttcttttaagattttactatctct 32950806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 34228789 - 34228554
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       |||||||||||||||||||| | ||||||||||||       ||||||    |||||||||||| |||| |    
T  34228789 caatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaaaattcttaatcacttaaaaaaagtctag----tggtattcaaaatcattga 34228694  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34228693 aatttcgaatgattgtttaataaatcagattttgatggattttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 34228594  T
Q  201 tcttaagattgtt-ttttcttttaagattttactatctct 239  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  34228593 tcttaagattgtttttttcttttaagattttactatctct 34228554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 41881289 - 41881051
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||          |   ||||||||||||||| ||||||    
T  41881289 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtt---tagtggtattcaaaatcattca 41881193  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41881192 aatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 41881093  T
Q  201 tcttaagattgtt---ttttcttttaagattttactatctct 239  Q
    ||||| |||||||   ||||||||||||||||||||||||||    
T  41881092 tcttaggattgtttttttttcttttaagattttactatctct 41881051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 7007374 - 7007610
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||| ||||||||       |||||||||||||||||||||||||||||||||||       ||||||    |||||||||||| ||||||    
T  7007374 caatcaagattctctgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcattca 7007469  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  | ||||||||||||||||||||    
T  7007470 aatttcgaaggattgtttaataaatcagattttgatgaattttgtgggattttctagtgaaattttagcatgaaaatttttttcatgaaaacatgagatt 7007569  T
Q  201 tcttaagattg--ttttttcttttaagattttactatctct 239  Q
    |||||||||||  ||||||||||||||||||||||||||||    
T  7007570 tcttaagattgttttttttcttttaagattttactatctct 7007610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 34 - 239
Target Start/End: Complemental strand, 30009850 - 30009648
Alignment:
Q  34 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagatttt 133  Q
    |||||||||||||||||||||||||||||||       ||||||    |||||||||||| |||| ||||||| || |||||||||||||||||||||||    
T  30009850 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcatttaaattttaaatgattgtttaataaatcagatttt 30009755  T
Q  134 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgtt-ttttcttttaagattttac 232  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  30009754 gatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgtttttttcttttaagattttac 30009655  T
Q  233 tatctct 239  Q
    |||||||    
T  30009654 tatctct 30009648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 34 - 239
Target Start/End: Original strand, 42786717 - 42786918
Alignment:
Q  34 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagatttt 133  Q
    |||||||||||||||||||||||||||| ||       ||||||    |||||||||||| ||||||||||| ||||||||||||||||||||| |||||    
T  42786717 tgtggtattcaatcaagactcttaatcatttaaaaaaagtctag----tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcatatttt 42786812  T
Q  134 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgttttttcttttaagattttact 233  Q
    |||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  42786813 gatggattttgtggaattttctagtgaaattttatcataaaaaagtctttcatgaaaacatgagatttcttatgattgttttttcttttaagattttact 42786912  T
Q  234 atctct 239  Q
    ||||||    
T  42786913 atctct 42786918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 34 - 239
Target Start/End: Original strand, 1044840 - 1045042
Alignment:
Q  34 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagatttt 133  Q
    |||||||||||||||||||||||||||||||       ||||||    |||||||||||| ||||||| ||| |||||||||||||||||||||||||||    
T  1044840 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaaccattcaactttcgaaggattgtttaataaatcagatttt 1044935  T
Q  134 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattg-ttttttcttttaagattttac 232  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||| |||||||||||||||||||||    
T  1044936 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataagatttcttagaattgtttttttcttttaagattttac 1045035  T
Q  233 tatctct 239  Q
     ||||||    
T  1045036 gatctct 1045042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 78 - 239
Target Start/End: Original strand, 41320883 - 41321045
Alignment:
Q  78 ctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaa 177  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  41320883 ctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatgttctagtgaaattttagtatgaaaaa 41320982  T
Q  178 gtctttcatgaaaacatgagatttcttaagattg-ttttttcttttaagattttactatctct 239  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  41320983 gtctttcataaaaacatgagatttcttaagattgattttttcttttaagattttaccatctct 41321045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 1112893 - 1113126
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||||||    |||||||||||| ||||||    
T  1112893 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcattca 1112988  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    |||||  || |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||    
T  1112989 aatttcaaatgattgtttaataaatcagattttgatggattttgtgggatttcctagtaaaattttaacatgaaaaagtctttcatgaaaacatgagatt 1113088  T
Q  201 tcttaagattgttttttcttttaagattttactatctct 239  Q
    ||||| ||||||||||| | ||||||||| |||||||||    
T  1113089 tcttaggattgtttttt-tcttaagatttaactatctct 1113126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 12112945 - 12113177
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       ||| |||||||||||||||| ||||||||||||||       |||||     |||||||||||| ||||||    
T  12112945 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaaagtctaa----tggtattcaaaatcattca 12113040  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12113041 aatttcgaaggattgtttaataaatcagattttaatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 12113140  T
Q  201 tcttaagattg-ttttttctttt-aagattttactat 235  Q
    ||||  ||||| ||||||||||| |||||||||||||    
T  12113141 tcttgggattgtttttttcttttaaagattttactat 12113177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 22202015 - 22202250
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||||||    |||||||||||| |||| |    
T  22202015 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcattaa 22202110  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    |||||  || ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  22202111 aatttcaaaagattgtttaataaataaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacattagatt 22202210  T
Q  201 tcttaagattg-ttttttcttttaagattttactatctct 239  Q
    |||||  |||| ||||||||||||| ||||||||||||||    
T  22202211 tcttagcattgtttttttcttttaaaattttactatctct 22202250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 39479563 - 39479326
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctag-ctagtggtattcaaaagcattc 99  Q
    |||||||||||| |||||||||       ||| |||||||||||||||||||||||||||||||           || || ||||||||||||| |||||    
T  39479563 caatcaagattccttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaa---agacttgtggtattcaaaatcattc 39479467  T
Q  100 aaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagat 199  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  39479466 aaatttcgaagaattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaggaaaaagtctttcatgaaagcatgagat 39479367  T
Q  200 ttcttaagattgtt-ttttcttttaagattttactatctct 239  Q
    |||||| ||||||| |||||||||||||||||||| |||||    
T  39479366 ttcttaggattgtttttttcttttaagattttactctctct 39479326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 37046658 - 37046415
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctag-ctagtggtattcaaaagcattc 99  Q
    ||||||||||||||||||||||       ||  |||||||||||||||||||||||||||||||           || |||||| |||| |||| |||||    
T  37046658 caatcaagattctttgtcatttaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaa----agtctagtgatatttaaaatcattc 37046563  T
Q  100 aaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtg-aaattttagcatgaaaaagtctttcatgaaaacatgaga 198  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||    
T  37046562 aaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaaattttagcatgaaaaagtctttcatgaaaatatgaga 37046463  T
Q  199 tttcttaagattg--ttttttcttttaagattttactatctctgctcc 244  Q
    ||||||| |||||  |||||||||||||||||||||||||||| ||||    
T  37046462 tttcttaggattgttttttttcttttaagattttactatctctcctcc 37046415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 82 - 239
Target Start/End: Original strand, 3436670 - 3436828
Alignment:
Q  82 tggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtct 181  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||||||| |    
T  3436670 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgaattttgtgggattttgtagtgaaattttaacatgaaaaagttt 3436769  T
Q  182 ttcatgaaaacatgagatttcttaagattg-ttttttcttttaagattttactatctct 239  Q
    ||||||||||||| ||||||||||  |||| ||||||||||||||||||||||||||||    
T  3436770 ttcatgaaaacataagatttcttagaattgtttttttcttttaagattttactatctct 3436828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 96 - 239
Target Start/End: Complemental strand, 24131097 - 24130952
Alignment:
Q  96 attcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatg-aaaaagtctttcatgaaaacat 194  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||||    
T  24131097 attcaaatttcgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaggatgaaaaaaatctttcatgaaaacat 24130998  T
Q  195 gagatttcttaagattg-ttttttcttttaagattttactatctct 239  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||    
T  24130997 gagatttcttaggattgtttttttcttttaagattttactatctct 24130952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 79 - 239
Target Start/End: Complemental strand, 27454210 - 27454049
Alignment:
Q  79 tagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaag 178  Q
    ||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||    
T  27454210 tagtggtattcaaaatcattcaaattttgaaagattatttaataaatcagattttgatgaattttgtggaattttctagtgaaattttggcatgaaaaag 27454111  T
Q  179 tctttcatgaaaacatgagatttcttaagattgtt-ttttcttttaagattttactatctct 239  Q
    |||||||||||||||| | |||| ||||||||||| |||||||||||||| ||| |||||||    
T  27454110 tctttcatgaaaacataatatttgttaagattgtttttttcttttaagatattaatatctct 27454049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 46635848 - 46635619
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||       || |||    | |||||||||| ||||||    
T  46635848 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtttag----tagtattcaaaatcattca 46635753  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| ||||||||||||||||||| |||||      |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||    
T  46635752 aatttcgaaggattgtttaataaataagatt------gattttgtgggattttttagtgaaattttagcatgaaaaagtctttcataaaaacatgagatt 46635659  T
Q  201 tcttaagattgtt-ttttcttttaagattttactatctct 239  Q
    ||||| ||||||| ||||||||||| ||||||||||||||    
T  46635658 tcttaggattgtttttttcttttaaaattttactatctct 46635619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 78 - 239
Target Start/End: Complemental strand, 31314865 - 31314713
Alignment:
Q  78 ctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaa 177  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||    
T  31314865 ctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg----------tgggattttctagtgaaattttagcatgaaaaa 31314776  T
Q  178 gtctttcatgaaaacatgagatttcttaagattgtt-ttttcttttaagattttactatctct 239  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||    
T  31314775 gtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttactctctct 31314713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 78 - 239
Target Start/End: Original strand, 53275912 - 53276074
Alignment:
Q  78 ctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaa 177  Q
    |||||| |||| |||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  53275912 ctagtgatatttaaaatcattcaaatttcgaaggattgtgtaataaatcagattttgatggattttgtgagattttctaataaaattttagcatgaaaaa 53276011  T
Q  178 gtctttca-tgaaaacatgagatttcttaagattgttttttcttttaagattttactatctct 239  Q
    |||||||| | ||||| | |||||| ||| |||||||||||||||||||||||||||||||||    
T  53276012 gtctttcattaaaaactttagattttttaggattgttttttcttttaagattttactatctct 53276074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 19741114 - 19740929
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       ||||||||||||||| |||||||| ||||||||||       |||| |    ||||||| |||| ||||||    
T  19741114 caatcaagattctttgtcatttataaaaagtcatgtggtattcagtcaagacttttaatcacttaaaaaaagtcttg----tggtattaaaaatcattca 19741019  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaa 190  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  19741018 aatttcgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagcttgaaaaagtctttcatgaaa 19740929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 28541698 - 28541874
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       |||  ||||||||||||||||||||||||||||||       ||||||    |||||||||||| ||||||    
T  28541698 caatcaagattctttgtcatttaaaaaaagtctcgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcattca 28541793  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtct 181  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  28541794 aatttcgaatgattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtct 28541874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 5441480 - 5441615
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  5441480 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 5441579  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  5441580 tttcatgaaaagatgagatttcttgagattgttttt 5441615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 78 - 181
Target Start/End: Complemental strand, 7249898 - 7249795
Alignment:
Q  78 ctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaa 177  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7249898 ctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaa 7249799  T
Q  178 gtct 181  Q
    ||||    
T  7249798 gtct 7249795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 27768132 - 27768267
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  27768132 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 27768231  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  27768232 tttcatgaaaagatgagatttcttgagattgttttt 27768267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 48261203 - 48261338
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||| ||    
T  48261203 gtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatc 48261302  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  48261303 tttcatgaaaatatgagatttcttgagattgttttt 48261338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 54341220 - 54341355
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  54341220 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 54341319  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  54341320 tttcatgaaaagatgagatttcttgagattgttttt 54341355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 34 - 182
Target Start/End: Original strand, 25446083 - 25446227
Alignment:
Q  34 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagatttt 133  Q
    |||||||||||||||||||||||||||||||       ||||||    |||||||||||| ||||||||||| ||| |||||||||||||||||||||||    
T  25446083 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagatttt 25446178  T
Q  134 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctt 182  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  25446179 gatggattttgtgggattttttagtgaaattttagcatgaaaaagtctt 25446227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 37828532 - 37828397
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||  | |||||||||    
T  37828532 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaaaaagaaaaagtc 37828433  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  37828432 tttcatgaaaagatgagatttcttgagattgttttt 37828397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 117 - 239
Target Start/End: Original strand, 8711978 - 8712099
Alignment:
Q  117 ttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgttttt 216  Q
    |||||||||  |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||| ||||    
T  8711978 ttaataaattggattttgatggattttgtgggattttatagtgaaattttagcaagaaaaagtctttcatcaaaacatgagatttcttgagattg-tttt 8712076  T
Q  217 tcttttaagattttactatctct 239  Q
    |||||||| ||||||||||||||    
T  8712077 tcttttaaaattttactatctct 8712099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 85 - 230
Target Start/End: Original strand, 9163156 - 9163292
Alignment:
Q  85 tattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttc 184  Q
    ||||||||| ||||||||||| ||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||        ||    
T  9163156 tattcaaaatcattcaaatttcgaaggattgtttaataaattaaattttgatggattttgtggaattttctagtgaaattttagcatgaa--------tc 9163247  T
Q  185 atgaaaacatgagatttcttaagattgttttttcttttaagatttt 230  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||    
T  9163248 atgaaaacatgagatttcttatgattgtttttt-ttttaagatttt 9163292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 81 - 239
Target Start/End: Complemental strand, 40537280 - 40537131
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| |||| |||||| ||| |||||||||||||||| ||||||||||||||||||||          |||||||||||||||||||||||    
T  40537280 gtggtattcaaaatcatttaaatttcgaatgattgtttaataaatctgattttgatggattttgtgg----------tgaaattttagcatgaaaaagtc 40537191  T
Q  181 tttcatgaaaacatgagatttcttaaga-ttgttttttcttttaagattttactatctct 239  Q
    ||||||||||||||||||||||||| || || |||||| |||||||||||||||||||||    
T  40537190 tttcatgaaaacatgagatttcttaggatttttttttttttttaagattttactatctct 40537131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 82 - 202
Target Start/End: Complemental strand, 44770982 - 44770862
Alignment:
Q  82 tggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtct 181  Q
    |||||||||||| |||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||  | ||||||||||    
T  44770982 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttggtggattttgtgggattttctagtgaaattttaagaagaaaaagtct 44770883  T
Q  182 ttcatgaaaacatgagatttc 202  Q
    |||||||  ||||||||||||    
T  44770882 ttcatgacgacatgagatttc 44770862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 51320997 - 51321132
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  |||||||||||||||||||  ||||| ||||| ||||||| || ||||||||     
T  51320997 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgtaattttatagtgtaattttaacaagaaaaagtt 51321096  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  51321097 tttcatgaaaagatgagatttcttgagattgttttt 51321132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 54853598 - 54853463
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    |||||||||||||  ||||||||||  ||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||| ||    
T  54853598 gtggtattcaaaattattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatc 54853499  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  54853498 tttcatgaaaagatgagatttcttgagattgttttt 54853463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 32322167 - 32322302
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||   ||||||||||||||||||||||||| ||||| |||||||  | ||||| |||    
T  32322167 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaataagaaaatgtc 32322266  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    |||||| |||| |||||||||||| |||||||||||    
T  32322267 tttcataaaaagatgagatttcttgagattgttttt 32322302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 37915903 - 37916038
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||| | ||||| || |||||||||    
T  37915903 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtacttttaacaagaaaaagtc 37916002  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
     |||||||||| || |||||| || |||||||||||    
T  37916003 attcatgaaaagataagatttattgagattgttttt 37916038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 39 - 167
Target Start/End: Original strand, 23464993 - 23465117
Alignment:
Q  39 tattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatgg 138  Q
    ||||||||||||||||||||||||||       ||||||    |||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||    
T  23464993 tattcaatcaagactcttaatcacttaaaataagtctag----tggtattcaaaaccattcaaatttcgaaggattgtttaataaatcagaatttgatgg 23465088  T
Q  139 attttgtgggattttctagtgaaatttta 167  Q
    |||||||||||||||||||| ||||||||    
T  23465089 attttgtgggattttctagttaaatttta 23465117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 81 - 230
Target Start/End: Complemental strand, 39307383 - 39307234
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    |||||||||| || |||||||||||  || |||| |||||| |||    |||||||| ||||||||||||||||||||||||||||| |||||||||||     
T  39307383 gtggtattcataatcattcaaatttctaaagattatttaatgaattgagttttgatgaattttgtgggattttctagtgaaattttaacatgaaaaagtt 39307284  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttttcttttaagatttt 230  Q
    | | || ||||||||||||||||||  |||||||||||||||||||||||    
T  39307283 tctgataaaaacatgagatttcttagaattgttttttcttttaagatttt 39307234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 23987290 - 23987415
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||          ||||| ||||||| || |||||||||    
T  23987290 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattagattttgatggattttg----------tagtgtaattttaacaagaaaaagtc 23987379  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  23987380 tttcatgaaaagatgagatttcttgagattgttttt 23987415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 136 - 239
Target Start/End: Original strand, 11090435 - 11090537
Alignment:
Q  136 tggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgttttttcttttaagattttactat 235  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||| || |||||||||||||||||| ||||| |||||||||| | ||||||||||    
T  11090435 tggattttgtgggattttttagtgaaattttagcattaaaaagtctttaataaaaacatgagatttcttaggattg-tttttctttttaaattttactat 11090533  T
Q  236 ctct 239  Q
    ||||    
T  11090534 ctct 11090537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 82 - 204
Target Start/End: Original strand, 12913301 - 12913413
Alignment:
Q  82 tggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtct 181  Q
    |||||||||||| |||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||| || |||||||| |    
T  12913301 tggtattcaaaatcattcaaattttgaaggattgtttaataaat----------tggattttgtgggattttctagtgaaattttaacaagaaaaagtat 12913390  T
Q  182 ttcatgaaaacatgagatttctt 204  Q
    |||||||| ||||||||||||||    
T  12913391 ttcatgaagacatgagatttctt 12913413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 117 - 216
Target Start/End: Original strand, 24736447 - 24736546
Alignment:
Q  117 ttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgttttt 216  Q
    |||||||||  ||||||||||||||||||| |||||||||||||||||||| || ||| |||||||||||||||||||||||||||||  ||||||||||    
T  24736447 ttaataaattggattttgatggattttgtgagattttctagtgaaattttaacaagaagaagtctttcatgaaaacatgagatttcttgtgattgttttt 24736546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 82 - 216
Target Start/End: Complemental strand, 56445474 - 56445350
Alignment:
Q  82 tggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtct 181  Q
    |||||||||||| ||||||||||| ||| |||||||||||||||          ||||||||||||||||||||||||||| ||||||| ||||||||||    
T  56445474 tggtattcaaaatcattcaaatttcgaatgattgtttaataaat----------tggattttgtgggattttctagtgaaactttagcaagaaaaagtct 56445385  T
Q  182 ttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||| || |||||||||||||| |||||||||||    
T  56445384 ttcataaagacatgagatttcttgagattgttttt 56445350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 41725205 - 41725321
Alignment:
Q  85 tattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttc 184  Q
    ||||||||| ||||||||||||||||||||||||||   ||  |||||||||| ||||||||||||||| ||||| ||||||| || |||||| ||||||    
T  41725205 tattcaaaatcattcaaattttgaaggattgtttaa---attggattttgatgaattttgtgggattttatagtgtaattttaacaagaaaaaatctttc 41725301  T
Q  185 atgaaaacatgagatttctt 204  Q
    ||||||| ||||||||||||    
T  41725302 atgaaaagatgagatttctt 41725321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 80 - 154
Target Start/End: Complemental strand, 25504770 - 25504696
Alignment:
Q  80 agtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttc 154  Q
    |||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  25504770 agtgatattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttc 25504696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 81 - 239
Target Start/End: Complemental strand, 36479361 - 36479215
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    |||||||||||||  |||||||||| |||||||| ||||||||||  ||||||||||||||||           ||||||||||||||||  ||||||||    
T  36479361 gtggtattcaaaattattcaaatttcgaaggattatttaataaattggattttgatggatttt-----------tagtgaaattttagcaaaaaaaagtc 36479273  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttttcttttaagattttactatctct 239  Q
    ||| |||||||||||||||||||| |||||  |||||||||||| |||||||| |||||    
T  36479272 ttttatgaaaacatgagatttcttgagatt-atttttcttttaaaattttactctctct 36479215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 82 - 167
Target Start/End: Original strand, 28371001 - 28371086
Alignment:
Q  82 tggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttta 167  Q
    |||||||||||| |||||||||||| ||||||||||||||||||   |||||| || |||||||||||||||||||||||||||||    
T  28371001 tggtattcaaaatcattcaaattttaaaggattgtttaataaattgaattttggtgaattttgtgggattttctagtgaaatttta 28371086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 81 - 217
Target Start/End: Complemental strand, 30967429 - 30967303
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| |||||||||||  ||||||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||| ||    
T  30967429 gtggtattcaaaatcattcaaatttcaaaggattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaaatc 30967340  T
Q  181 tttcatgaaaacatgagatttcttaagattgtttttt 217  Q
    ||||||||||| || ||||||||| ||||||||||||    
T  30967339 tttcatgaaaaaataagatttcttgagattgtttttt 30967303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 95 - 221
Target Start/End: Complemental strand, 41581904 - 41581780
Alignment:
Q  95 cattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatg-aaaaagtctttcatgaaaaca 193  Q
    |||||||||||||||  ||||||||||||||  ||||  |||  ||||||||||||||||||||||||||||| |||| ||||| | ||||||| |||||    
T  41581904 cattcaaattttgaataattgtttaataaattggatt--gatatattttgtgggattttctagtgaaattttaacatgaaaaaaatatttcatgtaaaca 41581807  T
Q  194 tgagatttcttaagattgttttttcttt 221  Q
    |||||||||||||  |||||||||||||    
T  41581806 tgagatttcttaa-cttgttttttcttt 41581780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 96 - 202
Target Start/End: Original strand, 20021424 - 20021531
Alignment:
Q  96 attcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagc-atgaaaaagtctttcatgaaaacat 194  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||| ||||||||| || |||||||||| | |  ||||| ||||||||||| ||||    
T  20021424 attcaaattttaaaggattgtttaataaattagattttgctggattttatgggattttttaatgaaattttaacaaaaaaaaaatctttcatgaagacat 20021523  T
Q  195 gagatttc 202  Q
     |||||||    
T  20021524 aagatttc 20021531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 28483975 - 28484099
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| |||||||| ||||||||||          |||||||||| ||||||| ||||| ||||| | || |||||||||    
T  28483975 gtggtattcaaaatcattcaaatttcgaaggattatttaataaat----------tggattttgtaggattttgtagtgtaatttaa-caagaaaaagtc 28484063  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| | |||||||||||||||| |||||    
T  28484064 tttcatgaaaagacgagatttcttaagattattttt 28484099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 81 - 147
Target Start/End: Complemental strand, 29649797 - 29649731
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgg 147  Q
    ||||||||||||| ||||||||||| ||| |||||||||||||||  ||||||||||||||||||||    
T  29649797 gtggtattcaaaatcattcaaatttcgaaagattgtttaataaattggattttgatggattttgtgg 29649731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 213
Target Start/End: Original strand, 50018327 - 50018449
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||| | |||||||||||||||||||||||||||||||   ||||| ||||||||||          ||||| ||||||| || |||||||||    
T  50018327 gtggtattcaagatcattcaaattttgaaggattgtttaataaattgaattttaatggattttg----------tagtgtaattttaacaagaaaaagtc 50018416  T
Q  181 tttcatgaaaacatgagatttcttaagattgtt 213  Q
    ||||| ||||| ||||||||| || ||||||||    
T  50018417 tttcaagaaaagatgagatttattgagattgtt 50018449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 5800054 - 5800179
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| |||||||||||  ||||||||||||||||||          ||||||||||| |||||| ||| | ||||||| || |||||||||    
T  5800054 gtggtattcaaaatcattcaaatttcaaaggattgtttaataaat----------tggattttgtgagattttgtagagtaattttaacaagaaaaagtc 5800143  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||| ||||||| || |||||| || |||||||||||    
T  5800144 tttaatgaaaagataagattttttgagattgttttt 5800179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 232
Target Start/End: Complemental strand, 13400935 - 13400785
Alignment:
Q  84 gtattcaaaagcattcaaattttgaaggattgtttaa--taaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtct 181  Q
    ||||| |||| ||||| |||||||| |||| ||||||  |||||  | |||||||| |||||||| |||||| || ||||| |||  ||| ||||| |||    
T  13400935 gtattgaaaaacattctaattttgagggatagtttaaaataaattgggttttgatgaattttgtgagattttttaatgaaaatttttcataaaaaaatct 13400836  T
Q  182 ttcatgaaaacatgagatttcttaagattgttttttcttttaagattttac 232  Q
    |  || ||||||||||||||||  |||||||| ||||||||||||| ||||    
T  13400835 tctattaaaacatgagatttctatagattgttatttcttttaagatcttac 13400785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 49501641 - 49501514
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    |||| |||||||| ||||||||||| ||| |||||||||||||||          |||||||||||| ||||| ||||| ||||||| || |||||||||    
T  49501641 gtggcattcaaaatcattcaaatttcgaatgattgtttaataaat----------tggattttgtggaattttgtagtgtaattttaacaagaaaaagtc 49501552  T
Q  181 tttc--atgaaaacatgagatttcttaagattgttttt 216  Q
    ||||  || |||| |||||||||||| |||||||||||    
T  49501551 tttcatataaaaagatgagatttcttgagattgttttt 49501514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 49507706 - 49507579
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    |||| |||||||| ||||||||||| ||| |||||||||||||||          |||||||||||| ||||| ||||| ||||||| || |||||||||    
T  49507706 gtggcattcaaaatcattcaaatttcgaatgattgtttaataaat----------tggattttgtggaattttgtagtgtaattttaacaagaaaaagtc 49507617  T
Q  181 tttc--atgaaaacatgagatttcttaagattgttttt 216  Q
    ||||  || |||| |||||||||||| |||||||||||    
T  49507616 tttcatataaaaagatgagatttcttgagattgttttt 49507579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 32684072 - 32684003
Alignment:
Q  147 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||| || |||||||||||    
T  32684072 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttattgagattgttttt 32684003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 217
Target Start/End: Complemental strand, 36728023 - 36727944
Alignment:
Q  137 ggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgtttttt 217  Q
    ||||||||| ||||||| ||||||||||||| || |||||| ||||||||| | ||||||||||| || ||||||||||||    
T  36728023 ggattttgtaggattttttagtgaaattttaacaagaaaaaatctttcatg-agacatgagattttttgagattgtttttt 36727944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 24131178 - 24131115
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcactt 64  Q
    ||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||    
T  24131178 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcactt 24131115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 134
Target Start/End: Complemental strand, 32684118 - 32684065
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttg 134  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  |||||||    
T  32684118 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 32684065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 49834897 - 49834828
Alignment:
Q  147 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||| ||||| ||||||| || ||| ||||||||||| |||| |||||||||||| |||||||||||    
T  49834897 ggattttgtagtgtaattttaacaagaagaagtctttcattaaaagatgagatttcttgagattgttttt 49834828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 134
Target Start/End: Complemental strand, 49834943 - 49834890
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttg 134  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  |||||||    
T  49834943 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 49834890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 40537351 - 40537288
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcactt 64  Q
    ||||||||| ||||||||||||       ||| |||||||||||||||| ||||||||||||||    
T  40537351 caatcaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaaaactcttaatcactt 40537288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 203
Target Start/End: Complemental strand, 55047674 - 55047641
Alignment:
Q  170 atgaaaaagtctttcatgaaaacatgagatttct 203  Q
    ||||||||||||||||||||||||||| ||||||    
T  55047674 atgaaaaagtctttcatgaaaacatgatatttct 55047641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 203
Target Start/End: Original strand, 12193135 - 12193227
Alignment:
Q  111 gattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 203  Q
    ||||||||||||| |   |||||| |||||||||||||| | | ||||||| ||| ||||| ||||| |||| ||| ||||||  ||||||||    
T  12193135 gattgtttaataagttgaattttggtggattttgtgggaatatttagtgaattttcagcataaaaaaatcttacattaaaacacaagatttct 12193227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 152; Significance: 1e-80; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 21147068 - 21147302
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||||||    |||||||||||| ||||||    
T  21147068 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcattca 21147163  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21147164 aatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 21147263  T
Q  201 tcttaagattgttttttcttttaagattttactatctct 239  Q
    ||||| |||||||||||  |||||||||||| |||||||    
T  21147264 tcttaggattgtttttttctttaagattttattatctct 21147302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 34 - 239
Target Start/End: Complemental strand, 33656213 - 33656012
Alignment:
Q  34 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagatttt 133  Q
    |||||||||||||||||||||||||||||||        ||||     |||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  33656213 tgtggtattcaatcaagactcttaatcacttaaaaaaaatctaa----tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 33656118  T
Q  134 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgttttttcttttaagattttact 233  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  33656117 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaatatgagatttcttaggattgttttttcttttaagattttact 33656018  T
Q  234 atctct 239  Q
    ||||||    
T  33656017 atctct 33656012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 38 - 239
Target Start/End: Complemental strand, 7016907 - 7016709
Alignment:
Q  38 gtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatg 137  Q
    |||||||||||||||||||||||||||       ||||||    |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  7016907 gtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatg 7016812  T
Q  138 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattg-ttttttcttttaagattttactatc 236  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||| |||||||||||||||||||||||||    
T  7016811 gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttagaattgtttttttcttttaagattttactatc 7016712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 5273124 - 5272884
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       ||| | |||||||||||||||||||||||||| ||       ||||||    |||||||||||| ||||||    
T  5273124 caatcaagattctttgtcatttaaaaaaagtcttatggtattcaatcaagactcttaatcatttaaaaaaagtctag----tggtattcaaaatcattca 5273029  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  5273028 aatttcgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatt 5272929  T
Q  201 tcttaagattgtttttt-cttttaagattttactatctctgctcc 244  Q
    ||||||  ||||||||| ||||||| |||||||||||||| ||||    
T  5272928 tcttaattttgttttttacttttaaaattttactatctctcctcc 5272884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 27459154 - 27458920
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    |||| |||||||||||||||||       ||| ||| |||||||||||||||||||||||||||       ||||||    |||||||||||| ||||||    
T  27459154 caattaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaa-gtctag----tggtattcaaaatcattca 27459060  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
     |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| |||    
T  27459059 gattttgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatcattcatgaaaacatgatatt 27458960  T
Q  201 tcttaagattgtt-ttttcttttaagattttactatctct 239  Q
    ||||| ||||||| ||||||||||||||||||||||||||    
T  27458959 tcttaggattgtttttttcttttaagattttactatctct 27458920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 139274 - 139509
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       |||||||||||||||||||||||| ||||||||||       ||||||    |||||||||||| ||||||    
T  139274 caatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagacttttaatcacttaaaaaaagtctag----tggtattcaaaatcattca 139369  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| |||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||  ||||||||||||||||| |||||||||||||    
T  139370 aatttcgaaggattgtttaataaaccagattttgatggattttgttggattttccagtgaaattttaatatgaaaaagtctttcataaaaacatgagatt 139469  T
Q  201 tcttaagat--tgttttttcttttaagattttactatctc 238  Q
    |||||| ||  | |||||||||||||||||||||| ||||    
T  139470 tcttaaaattattttttttcttttaagattttactctctc 139509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 78 - 239
Target Start/End: Complemental strand, 32158029 - 32157864
Alignment:
Q  78 ctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaa- 176  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||| |||||     
T  32158029 ctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaattagattttgacggattttgtgggattttctagtaaaattttagcacgaaaaa 32157930  T
Q  177 --agtctttcatgaaaacatgagatttcttaagattgtt-ttttcttttaagattttactatctct 239  Q
      |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  32157929 atagtctttcatgaaaacatgagatttcttaaaattgttcttttcttttaagattttactatctct 32157864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 34 - 239
Target Start/End: Original strand, 849181 - 849375
Alignment:
Q  34 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagatttt 133  Q
    |||||||||||||||||||||||||||||||       |||||     |||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  849181 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctaa----tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 849276  T
Q  134 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatg-aaaacatgagatttcttaagattg-ttttttcttttaagatttta 231  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||         ||||| ||||||||||||||||||||    
T  849277 gatagattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaaacatgag---------gattgtttttttcttttaagatttta 849367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 14000234 - 14000099
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  14000234 gtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 14000135  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  14000134 tttcatgaaaagatgagatttcttgagattgttttt 14000099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 1152232 - 1152097
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| || ||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  1152232 gtggtattcaaaatcattcaaatttcgagggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 1152133  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||| ||||||| ||||||||||||||||||||||||    
T  1152132 ttttatgaaaagatgagatttcttaagattgttttt 1152097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 81 - 240
Target Start/End: Original strand, 9689735 - 9689893
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    |||||||| |||| |||| |||||| ||| |||||||| |||||| ||||||||||||||| |||| |||||||| || ||||||||  |||||||||||    
T  9689735 gtggtatttaaaatcatt-aaatttcgaatgattgtttgataaattagattttgatggattgtgtgagattttcttgtaaaattttattatgaaaaagtc 9689833  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttttcttttaagattttactatctctg 240  Q
    |||||| ||||||| |||||||||| ||||||||||||||||||||||||| ||||||||    
T  9689834 tttcataaaaacataagatttcttatgattgttttttcttttaagattttattatctctg 9689893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 13926008 - 13926143
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  13926008 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 13926107  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||| ||||| |||| ||||||| |||||||||||    
T  13926108 tttcaagaaaagatgatatttcttgagattgttttt 13926143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 39852422 - 39852557
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| ||||||||||||| |||||  |||||||||||||||| ||||||||| ||||| ||||||| || |||||||||    
T  39852422 gtggtattcaaaatcattcaaatttcgaaggattgtttactaaattggattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtc 39852521  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  39852522 tttcatgaaaagatgagatttcttgagattgttttt 39852557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 6460793 - 6461013
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       ||||||| |||||||||||||||||||||||| ||        |||||    |||||||||||| ||||||    
T  6460793 caatcaagattctttgtcatttaaaaaaagtcatgtcgtattcaatcaagactcttaatcatttaaaaaaaatctag----tggtattcaaaatcattca 6460888  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||               ||||||||| ||||||||    
T  6460889 aatttcgaaggtttgtttaataaatcagattttgatggattttgagggattttctagtgaaatttta---------------tcatgaaaaaatgagatt 6460973  T
Q  201 tcttaagattg-ttttttcttttaagattttactatctct 239  Q
    ||||||||||| |||||| |||||||||||||||||||||    
T  6460974 tcttaagattgttttttttttttaagattttactatctct 6461013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 81 - 222
Target Start/End: Complemental strand, 4550386 - 4550245
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  |||||||||||||||||||| ||||| ||||| ||||||| || |||| ||||    
T  4550386 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtggaattttgtagtgtaattttaacaagaaagagtc 4550287  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttttctttt 222  Q
    ||||||||||| ||||||||| || |||||||||||| ||||    
T  4550286 tttcatgaaaagatgagatttgttgagattgttttttttttt 4550245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 85 - 216
Target Start/End: Complemental strand, 7947698 - 7947567
Alignment:
Q  85 tattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttc 184  Q
    ||||||||| ||||||||||| |||||||||||||||||||  |||||||||||||||||||| ||||| ||||| ||||||| || |||||||||||||    
T  7947698 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtggaattttgtagtgtaattttaacaagaaaaagtctttc 7947599  T
Q  185 atgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||| | |||||||||| | |||||||||    
T  7947598 atgaaaagaagagatttcttgaaattgttttt 7947567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 5949185 - 5949310
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  |||||||||||||||||          ||||| ||||||| || |||||||||    
T  5949185 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttg----------tagtgtaattttaacaagaaaaagtc 5949274  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  5949275 tttcatgaaaagatgagatttcttgagattgttttt 5949310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 4240581 - 4240456
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  |||||||||||||||||          ||||| ||||||| || |||||||||    
T  4240581 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttg----------tagtgtaattttaacaagaaaaagtc 4240492  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||| | |||||||||||| |||||||||||    
T  4240491 tttcatgaatagatgagatttcttgagattgttttt 4240456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 141 - 231
Target Start/End: Complemental strand, 9220786 - 9220696
Alignment:
Q  141 tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgttttttcttttaagatttta 231  Q
    ||||| ||||||| |||| |||||||| || ||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||    
T  9220786 tttgtaggattttatagtaaaattttaacacgaaaaagtctttcgtgaaaacatgatatttcttaggattgttttttcttttaagatttta 9220696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 81 - 171
Target Start/End: Complemental strand, 14465356 - 14465266
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcat 171  Q
    ||||||||||||| ||||||||||| ||| |||||||||||||||| |||||||||| ||||||||| |||||||||| | ||||||||||    
T  14465356 gtggtattcaaaatcattcaaatttcgaaagattgtttaataaatcggattttgatgaattttgtggaattttctagtaatattttagcat 14465266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 85 - 216
Target Start/End: Original strand, 22746378 - 22746501
Alignment:
Q  85 tattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttc 184  Q
    ||||||||| ||||||||||| ||| |||||||||||||||   |||||||||||||||||||||        || ||||||| || |||||| ||||||    
T  22746378 tattcaaaatcattcaaatttcgaatgattgtttaataaattgaattttgatggattttgtggga--------tgtaattttaacaagaaaaactctttc 22746469  T
Q  185 atgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||| || |||||||||||||||||||||    
T  22746470 atgaaaagataagatttcttaagattgttttt 22746501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 85 - 216
Target Start/End: Complemental strand, 1461263 - 1461142
Alignment:
Q  85 tattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttc 184  Q
    ||||||||| ||||||||||| |||||||||||||||||||  |||||||||||||||||          || || ||||||| || |||||| ||||||    
T  1461263 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttg----------tactgtaattttaacaagaaaaaatctttc 1461174  T
Q  185 atgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||| |||||||||||| |||||||||||    
T  1461173 atgaaaagatgagatttcttgagattgttttt 1461142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 85 - 216
Target Start/End: Complemental strand, 40013827 - 40013706
Alignment:
Q  85 tattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttc 184  Q
    ||||||||| ||||||||||| ||||||||||||||| |||  |||||| |||||||||||          |||| ||||||| || |||||||||||||    
T  40013827 tattcaaaatcattcaaatttcgaaggattgtttaatcaattggattttaatggattttgt----------agtgtaattttaacaagaaaaagtctttc 40013738  T
Q  185 atgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||| |||||||||||| |||||||||||    
T  40013737 atgaaaagatgagatttcttgagattgttttt 40013706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 237
Target Start/End: Complemental strand, 1511426 - 1511323
Alignment:
Q  136 tggattttgtggga-ttttctagtgaaattttagcatg-aaaaagtctttcatgaaaacatgagatttcttaagattgttttttcttttaagattttact 233  Q
    |||||||||||||| |||| ||||||  |||| ||||| ||||| ||||| |||||||||| |||||| ||| ||||||| |||||||||| ||||| ||    
T  1511426 tggattttgtgggatttttttagtgagtttttggcatgaaaaaaatcttttatgaaaacataagattttttaggattgttatttcttttaaaattttcct 1511327  T
Q  234 atct 237  Q
    ||||    
T  1511326 atct 1511323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 147 - 216
Target Start/End: Original strand, 37014037 - 37014106
Alignment:
Q  147 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||| ||||  ||||||| || ||||||||||||||| |||| |||||||||||| |||||||||||    
T  37014037 ggattttgtagtataattttaacaagaaaaagtctttcataaaaagatgagatttcttgagattgttttt 37014106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 134
Target Start/End: Original strand, 37013993 - 37014044
Alignment:
Q  83 ggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttg 134  Q
    ||||||||||| ||||||||||| ||||| |||||||||||||  |||||||    
T  37013993 ggtattcaaaatcattcaaatttcgaagggttgtttaataaattggattttg 37014044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 64
Target Start/End: Complemental strand, 16894074 - 16894044
Alignment:
Q  34 tgtggtattcaatcaagactcttaatcactt 64  Q
    |||||||||||||||||||||||||||||||    
T  16894074 tgtggtattcaatcaagactcttaatcactt 16894044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 32158103 - 32158040
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcactt 64  Q
    ||||||||||||||||||||||       ||| ||||||||||||||||||| | |||||||||    
T  32158103 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacccctaatcactt 32158040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 149; Significance: 8e-79; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 15239 - 15004
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       ||| ||| |||||||||||||||||||||||||||       ||||||    |||||||||||| ||||||    
T  15239 caatcaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcattca 15144  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  15143 aatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatt 15044  T
Q  201 tcttaagattgtt-ttttcttttaagattttactatctct 239  Q
    ||||| ||||||| ||||||||||||||||||||||||||    
T  15043 tcttaggattgtttttttcttttaagattttactatctct 15004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 149; Significance: 8e-79; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 15882 - 15647
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       ||| ||| |||||||||||||||||||||||||||       ||||||    |||||||||||| ||||||    
T  15882 caatcaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcattca 15787  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  15786 aatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatt 15687  T
Q  201 tcttaagattgtt-ttttcttttaagattttactatctct 239  Q
    ||||| ||||||| ||||||||||||||||||||||||||    
T  15686 tcttaggattgtttttttcttttaagattttactatctct 15647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 149; Significance: 8e-79; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 19452014 - 19451779
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       ||| ||||||||| |||||||||||||||||||||       ||||||    |||||||||||| ||||||    
T  19452014 caatcaagattctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcattca 19451919  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19451918 aatttcgaaggatcgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 19451819  T
Q  201 tcttaagattgtt-ttttcttttaagattttactatctct 239  Q
    ||||| ||||||| ||||||||||||||||||||||||||    
T  19451818 tcttatgattgtttttttcttttaagattttactatctct 19451779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 50192757 - 50192521
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctag-ctagtggtattcaaaagcattc 99  Q
    |||||||||||| |||||||||       ||| |||||||||||||||||||||||||||||||           || |||||||||||||||| |||||    
T  50192757 caatcaagattccttgtcattttaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaa----agtctagtggtattcaaaatcattc 50192662  T
Q  100 aaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagat 199  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50192661 aaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagat 50192562  T
Q  200 ttcttaagattgtt-ttttcttttaagattttactatctct 239  Q
    || ||| ||||||| ||||||||||||||||||||||||||    
T  50192561 tttttaggattgtttttttcttttaagattttactatctct 50192521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 21222141 - 21222376
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||       ||||||     ||||||||||| ||||||    
T  21222141 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctaga----ggtattcaaaatcattca 21222236  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  21222237 aatttcgaaggattgtttaataaataagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 21222336  T
Q  201 tcttaagattgtt-ttttcttttaagattttactatctct 239  Q
    ||||| ||||||| ||||||||||||||||||||||||||    
T  21222337 tcttaggattgttattttcttttaagattttactatctct 21222376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 45760216 - 45759980
Alignment:
Q  1 caatcaagattctttgtca-tttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattc 99  Q
    ||||||||||||||||||| |||       |||||||||||||||||||||||||||||||||||       ||||||    |||||||||||| |||||    
T  45760216 caatcaagattctttgtcaatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcattc 45760121  T
Q  100 aaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagat 199  Q
    ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  45760120 aaacttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttgatgaaaacatgagat 45760021  T
Q  200 ttcttaagattgtt-ttttcttttaagattttactatctct 239  Q
    |||||| ||||||| ||||||||||||||||||||||||||    
T  45760020 ttcttaggattgtttttttcttttaagattttactatctct 45759980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 80 - 239
Target Start/End: Complemental strand, 49198400 - 49198240
Alignment:
Q  80 agtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagt 179  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49198400 agtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagt 49198301  T
Q  180 ctttcatgaaaacatgagatttcttaagattgtt-ttttcttttaagattttactatctct 239  Q
    ||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||    
T  49198300 ctttcatgaaaacatgatatttcttaggattgtttttttcttttaagattttactatctct 49198240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 30 - 239
Target Start/End: Original strand, 47780734 - 47780940
Alignment:
Q  30 gtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcaga 129  Q
    |||||||||||||||||||||||||||||||||||       ||||||    || ||||||||| |||||||| ||  ||||||||||||||||||||||    
T  47780734 gtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tgatattcaaaatcattcaaaattaaaaggattgtttaataaatcaga 47780829  T
Q  130 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattg-ttttttcttttaagatt 228  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  47780830 ttttgatggattttgtgggattttctagtgaaattttaacatgaaaaagtttttcatgaaaacatgagatttcttaagattgtttttttcttttaagatt 47780929  T
Q  229 ttactatctct 239  Q
    |||||| ||||    
T  47780930 ttactacctct 47780940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 78 - 239
Target Start/End: Complemental strand, 6304385 - 6304221
Alignment:
Q  78 ctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaa 177  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6304385 ctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaa 6304286  T
Q  178 gtctttcatgaaaacatgagatttcttaagattgtt---ttttcttttaagattttactatctct 239  Q
    ||||||||||||||||||| |||||||| |||||||   |||||||||||||||||||| |||||    
T  6304285 gtctttcatgaaaacatgaaatttcttatgattgtttttttttcttttaagattttactctctct 6304221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 47654558 - 47654322
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctag-ctagtggtattcaaaagcattc 99  Q
    ||||||||||||||||||||||       ||| |||||||||||||||| ||||||||||||||           || ||||||||||||||||  ||||    
T  47654558 caatcaagattctttgtcatttaaaagaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaaa----agtctagtggtattcaaaattattc 47654463  T
Q  100 aaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagat 199  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  47654462 aaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagggaaattttagcatgaaaaagtatttcatgaaaacatgagat 47654363  T
Q  200 ttcttaagattgtt-ttttcttttaagattttactatctct 239  Q
    |||||| ||||||| ||||||||||||||||||||||||||    
T  47654362 ttcttaggattgtttttttcttttaagattttactatctct 47654322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 35679334 - 35679101
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||        || ||| |||||||||||||||||||||||||||       |||  |    |||||||||||| ||||||    
T  35679334 caatcaagattctttgtcatttaaaaaaaatcttgtagtattcaatcaagactcttaatcacttaaaaaaagtcatg----tggtattcaaaatcattca 35679239  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  35679238 aatttcgaaggattgtttaataaatcagattttgatggatttgatgggattttctagtgaaattttagcatgaaaaagtctttcatgaagacatgagatt 35679139  T
Q  201 tcttaagattgt---tttttcttttaagattttactat 235  Q
    ||||||||||||   |||||||||||||||||||||||    
T  35679138 tcttaagattgtttctttttcttttaagattttactat 35679101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 28824578 - 28824346
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||| ||||||||||       ||| |||||||||||||||||||||||||||||||       |||| |    |||||||||||| ||||||    
T  28824578 caatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaacagtcttg----tggtattcaaaatcattca 28824483  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| || |||||||||||||    
T  28824482 aatttcgaag-attgtttaataaatcagattttgatggattttgtgggattttctagggaaattttaacatgaaaaagtcttttataaaaacatgagatt 28824384  T
Q  201 tcttaagattgtt-ttttcttttaagattttactatct 237  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  28824383 tcttaggattgtttttttcttttaagattttactatct 28824346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 81 - 239
Target Start/End: Complemental strand, 32589083 - 32588930
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  32589083 gtggtattcaaaatcattcaaattttgaaggattgtttaataaatcggattttgatggattttgtgagattttctagtgaaattttagcataaaaaagtc 32588984  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttttcttttaagattttactatctct 239  Q
    |||||||||||||||||||||     ||||||||||||||||||||||||||| |||||    
T  32588983 tttcatgaaaacatgagattt-----gattgttttttcttttaagattttactctctct 32588930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 35279666 - 35279875
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       ||| |||||||||||||||||||| ||||||||||       ||||||    |||||||||||| |||| |    
T  35279666 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactattaatcacttaaaaaaagtctag----tggtattcaaaatcattta 35279761  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  35279762 aatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttcaacatgaaaaagtctttcatgaaaacatgagatt 35279861  T
Q  201 tcttaagattgttt 214  Q
    |||||  |||||||    
T  35279862 tcttagaattgttt 35279875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 81 - 239
Target Start/End: Complemental strand, 31572327 - 31572168
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||    
T  31572327 gtggtattcaaaatcatttaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttatagtgaaattttaggatgaaaaagtc 31572228  T
Q  181 tttcatgaaaacatgagatttcttaagattg-ttttttcttttaagattttactatctct 239  Q
    |||||||||| ||||||||||||||  |||| |||||||||||||||||||||| |||||    
T  31572227 tttcatgaaatcatgagatttcttagaattgtttttttcttttaagattttactctctct 31572168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 78 - 239
Target Start/End: Original strand, 29556171 - 29556333
Alignment:
Q  78 ctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaa 177  Q
    |||||| ||||||||| ||||||||||| ||| ||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||| |||||||    
T  29556171 ctagtgttattcaaaatcattcaaatttcgaaagattgtttaataaattagattttgatggattttatgggattttctaatgaaattttagcttgaaaaa 29556270  T
Q  178 gtctttcatgaaa-acatgagatttcttaagattgttttttcttttaagattttactatctct 239  Q
    |||||| |||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  29556271 gtcttttatgaaacacatgagatttcttaggattgttttttcttttaagatttaactatctct 29556333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 34 - 217
Target Start/End: Original strand, 45535971 - 45536156
Alignment:
Q  34 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagatttt 133  Q
    ||||||||||||||||||||||||||| |||       ||||||    |||||||||||| ||||||||||| ||| |||||||||||||||||||||||    
T  45535971 tgtggtattcaatcaagactcttaatcgcttaaaaaaagtctag----tggtattcaaaatcattcaaatttcgaaagattgtttaataaatcagatttt 45536066  T
Q  134 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcat------gaaaacatgagatttcttaagattgtttttt 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||| |||||||||||    
T  45536067 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacgaaaacatgagatttcttaggattgtttttt 45536156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 33 - 222
Target Start/End: Original strand, 49418110 - 49418295
Alignment:
Q  33 atgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattt 132  Q
    |||||||||||||| |||||||||||||||||       ||||||    |||||||||||| |||||||||||  |||||||||||||||||||||||||    
T  49418110 atgtggtattcaattaagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcattcaaatttcaaaggattgtttaataaatcagattt 49418205  T
Q  133 tgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgttttttctttt 222  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||  ||| |||||| ||||    
T  49418206 tgatggattttgtgggattttctattgaaattttagcatgaaaaaatctttcatgaaaatatgagatttcttagaatttttttttttttt 49418295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 85 - 246
Target Start/End: Complemental strand, 9577558 - 9577398
Alignment:
Q  85 tattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttc 184  Q
    ||||||||| ||||||||||| |||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||    
T  9577558 tattcaaaatcattcaaatttagaaggattgtttaataaattggattttgatggattttgtgagattttctagtgaaattttagaatgaaaaaatctttc 9577459  T
Q  185 atgaaaacatgagatttcttaagattgttttttcttttaagattttactatctctgctcctc 246  Q
    ||||||||||||||||||||  ||||| |||||||||||| |||||||| ||||| ||||||    
T  9577458 atgaaaacatgagatttcttgggattg-tttttcttttaaaattttactctctcttctcctc 9577398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 81 - 239
Target Start/End: Original strand, 33025583 - 33025731
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||          ||||||||||||||| | |||||||||||||||||||||    
T  33025583 gtggtattcaaaatcattcaaattttgaaggattgtttaatacatcagatt----------ttgtgggattttctaataaaattttagcatgaaaaagtc 33025672  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttttcttttaagattttactatctct 239  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  33025673 tttcatgaaaacatgagatttcttatgattgtgttttcttttaagattttactatctct 33025731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 6312644 - 6312779
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  6312644 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 6312743  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  6312744 tttcatgaaaagatgagatttcttgagattgttttt 6312779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 29396518 - 29396383
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  29396518 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 29396419  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  29396418 tttcatgaaaagatgagatttcttgagattgttttt 29396383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 48177592 - 48177457
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| ||| |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  48177592 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 48177493  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  48177492 tttcatgaaaagatgagatttcttgagattgttttt 48177457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 51701650 - 51701785
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  51701650 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 51701749  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| ||||||||| || |||||||||||    
T  51701750 tttcatgaaaagatgagattttttgagattgttttt 51701785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 85 - 230
Target Start/End: Complemental strand, 37014766 - 37014622
Alignment:
Q  85 tattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttc 184  Q
    ||||||||| |||||||||||  || |||||||| ||||||   ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||    
T  37014766 tattcaaaatcattcaaatttctaaagattgttttataaattgaattttgatggattttgtcggattttctagtgaaattttagcatgaaaaagtctctc 37014667  T
Q  185 atgaaaacatgagatttcttaagattgttttttcttttaagatttt 230  Q
    || ||||||||||||||||||||||||| |||||| ||||||||||    
T  37014666 ataaaaacatgagatttcttaagattgt-ttttctcttaagatttt 37014622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 9322630 - 9322495
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||   ||||||||||||||| ||||||||| ||||| ||||||| || |||||||||    
T  9322630 gtggtattcaaaatcattcaaatttagaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtc 9322531  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  9322530 tttcatgaaaagatgagatttcttgagattgttttt 9322495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 25612227 - 25612362
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| |||||||||||  ||||||||||||||||||  |||||||||||||||||||||||||| ||||  ||||||| || |||||||||    
T  25612227 gtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtataattttaacaagaaaaagtc 25612326  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  25612327 tttcatgaaaagatgagatttcttgagattgttttt 25612362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 730142 - 730314
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctag-ctagtggtattcaaaagcattc 99  Q
    ||||||||||||||||||||||       ||| |||||||||||||||||||||||||||||||           || |||||||||||||||| |||||    
T  730142 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaa----agtctagtggtattcaaaatcattc 730237  T
Q  100 aaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaa 176  Q
    |||||| || | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  730238 aaatttcgacgaattgtttaataaatcagattttgatggattttgtgagattttctagtgaaattttagcatgaaaa 730314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 15835183 - 15835048
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||   ||||||||||||||||||  |||||||||||||||| ||||||||| ||||| ||||||| || |||||||||    
T  15835183 gtggtattcaaaatcattcaaattgcaaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtc 15835084  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  15835083 tttcatgaaaagatgagatttcttgagattgttttt 15835048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 48524313 - 48524490
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||| ||||||||||        |||||||||||| |||||| ||||||||||||||       |||| |    || ||||||||| ||||||    
T  48524313 caatcaagattttttgtcatttaaaaaaattcatgtggtatttaatcaaaactcttaatcacttaaaaaaagtcttg----tgatattcaaaatcattca 48524408  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctt 182  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  48524409 aattttgaaagattgtttaataaatcagtttttgatggattttgtgggattttctagtgaaattttaacatgaaaaagtctt 48524490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 28387523 - 28387388
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||  ||||||||||| |||||||||||||||||||  |||||||||||||||||||||||||| ||||  ||||||| ||  ||||||||    
T  28387523 gtggtattcaaattcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtttaattttaacaaaaaaaagtc 28387424  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    |||||| |||| |||||||||||| |||||||||||    
T  28387423 tttcataaaaagatgagatttcttgagattgttttt 28387388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 46328112 - 46328247
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| ||||||||||||||| |||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  46328112 gtggtattcaaaatcattcaaatttcgaaggattgtttaattaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 46328211  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    |||||| |||| || ||||||||  | |||||||||    
T  46328212 tttcataaaaagataagatttctcgaaattgttttt 46328247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 81 - 231
Target Start/End: Original strand, 51085865 - 51086014
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    |||||||||||||  ||||||||||||||||||| || |||||||  |||||||||| ||||||||| ||||||| |||||||||||  ||||     |     
T  51085865 gtggtattcaaaataattcaaattttgaaggattattaaataaattggattttgatgaattttgtggaattttcttgtgaaattttaatatgattttttt 51085964  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttttcttttaagatttta 231  Q
    ||| ||||||| |||||||||  || |||||||||||||||||||||||||    
T  51085965 tttgatgaaaa-atgagattttctaggattgttttttcttttaagatttta 51086014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 29219356 - 29219481
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||  |||||||||||||||||||  |||||||||||||||||          ||||| ||||||| || ||||||||     
T  29219356 gtggtattcaaaatcattcaaattaagaaggattgtttaataaattggattttgatggattttg----------tagtgtaattttaacaagaaaaagta 29219445  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  29219446 tttcatgaaaagatgagatttcttgagattgttttt 29219481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 38536219 - 38536094
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    |||||||||||||  ||||||||||  ||||||||||||||||||  ||||||||||||||||||          |||| ||||||| || |||||||||    
T  38536219 gtggtattcaaaattattcaaatttcaaaggattgtttaataaattggattttgatggattttgt----------agtgtaattttaacaagaaaaagtc 38536130  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  38536129 tttcatgaaaagatgagatttcttgagattgttttt 38536094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 38558437 - 38558312
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    |||||||||||||  ||||||||||  ||||||||||||||||||  ||||||||||||||||||          |||| ||||||| || |||||||||    
T  38558437 gtggtattcaaaattattcaaatttcaaaggattgtttaataaattggattttgatggattttgt----------agtgtaattttaacaagaaaaagtc 38558348  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  38558347 tttcatgaaaagatgagatttcttgagattgttttt 38558312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 48668905 - 48668780
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    |||||||||||||  |||||||||| ||| |||||||||||||||          |||||||||||||||| | ||||| ||||||| || |||||||||    
T  48668905 gtggtattcaaaattattcaaatttcgaaagattgtttaataaat----------tggattttgtgggattctgtagtgtaattttaacaagaaaaagtc 48668816  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| ||||||||| ||  ||||||||||    
T  48668815 tttcatgaaaagatgagatttgttgggattgttttt 48668780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 84 - 143
Target Start/End: Original strand, 955823 - 955882
Alignment:
Q  84 gtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggatttt 143  Q
    |||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  955823 gtattcaaaatcattcaaatttcgaagggttgtttaataaatcagattttgatggatttt 955882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 174 - 233
Target Start/End: Original strand, 48524805 - 48524865
Alignment:
Q  174 aaaagtctttcatgaaaacatgagatttcttaagatt-gttttttcttttaagattttact 233  Q
    |||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||    
T  48524805 aaaagtctttcatgaaaacatgagatttgttaggattggttttttcttttaagattttact 48524865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 101 - 203
Target Start/End: Original strand, 38319996 - 38320098
Alignment:
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgt-gggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagat 199  Q
    ||||||||| ||||||||| |||||  ||||||||| |||||||| ||| |||| ||||||| ||||||||  ||||||||||||||||||| |||| ||    
T  38319996 aattttgaatgattgtttactaaataggattttgatagattttgttgggtttttttagtgaa-ttttagcacaaaaaagtctttcatgaaaatatgatat 38320094  T
Q  200 ttct 203  Q
    ||||    
T  38320095 ttct 38320098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 147 - 216
Target Start/End: Original strand, 18798607 - 18798676
Alignment:
Q  147 ggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||| ||||| ||||||| || |||||||||||||||||||| |||||||||||  |||||||||||    
T  18798607 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctagagattgttttt 18798676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 184 - 239
Target Start/End: Original strand, 730307 - 730362
Alignment:
Q  184 catgaaaacatgagatttcttaagattgttttttcttttaagattttactatctct 239  Q
    |||||||||||||||||||||| | || ||||| ||||||||||||||||||||||    
T  730307 catgaaaacatgagatttcttaggtttttttttccttttaagattttactatctct 730362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 134
Target Start/End: Original strand, 18798561 - 18798614
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttg 134  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||  |||||||    
T  18798561 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 18798614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 200
Target Start/End: Complemental strand, 5495226 - 5495117
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| |||| ||||||  ||||||| ||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||||    
T  5495226 gtggtattcaaaatcatttaaatttcaaaggattatttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 5495137  T
Q  181 tttcatgaaaacatgagatt 200  Q
     || ||||||| ||||||||    
T  5495136 ctttatgaaaagatgagatt 5495117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 216
Target Start/End: Original strand, 45272700 - 45272780
Alignment:
Q  136 tggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||| ||||| ||||||| || |||||| ||||| || |||| ||||||||| || |||||||||||    
T  45272700 tggattttgtgagattttgtagtgtaattttaacaagaaaaaatcttttataaaaagatgagattttttgagattgttttt 45272780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 953813 - 953876
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcactt 64  Q
    ||||||||||||||||||||||       ||| |||||||||| ||||||||||||||||||||    
T  953813 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcgatcaagactcttaatcactt 953876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 22183364 - 22183427
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcactt 64  Q
    ||||||||||||||||||||||       ||| |||||||||||||||||| ||||||||||||    
T  22183364 caatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagattcttaatcactt 22183427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 47784501 - 47784542
Alignment:
Q  136 tggattttgtgggattttctagtgaaattttagcatgaaaaa 177  Q
    ||||||||||| ||||||||||| ||||||||||||||||||    
T  47784501 tggattttgtgagattttctagttaaattttagcatgaaaaa 47784542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 125
Target Start/End: Original strand, 49230956 - 49231000
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaat 125  Q
    ||||||||||||| ||||||||||| |||||||| ||||||||||    
T  49230956 gtggtattcaaaatcattcaaatttcgaaggattatttaataaat 49231000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 134
Target Start/End: Complemental strand, 31622586 - 31622536
Alignment:
Q  84 gtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttg 134  Q
    |||||||||| |||||||||||  || |||||||||||||||| |||||||    
T  31622586 gtattcaaaatcattcaaatttcaaaagattgtttaataaatcggattttg 31622536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 43885203 - 43885157
Alignment:
Q  98 tcaaattttgaaggattgtttaataaatcagattttgatggattttg 144  Q
    |||||||||||| |||| ||||||||||  |||||||||||||||||    
T  43885203 tcaaattttgaatgattatttaataaattggattttgatggattttg 43885157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 147 - 175
Target Start/End: Original strand, 955876 - 955904
Alignment:
Q  147 ggattttctagtgaaattttagcatgaaa 175  Q
    |||||||||||||||||||||||||||||    
T  955876 ggattttctagtgaaattttagcatgaaa 955904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 144; Significance: 8e-76; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 39101 - 38867
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||| ||||||       ||| ||||||||||||| |||||||||||||||||       ||||||    || ||||||||| ||||||    
T  39101 caatcaagattctttatcatttaaaaaaagtcttgtggtattcaataaagactcttaatcacttaaaagaagtctag----tgatattcaaaatcattca 39006  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  39005 aatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatgagatt 38906  T
Q  201 tcttaagattgttttttcttttaagattttactatctct 239  Q
     |||| |||||||||||||||||||||||||||||||||    
T  38905 ccttaggattgttttttcttttaagattttactatctct 38867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 141; Significance: 5e-74; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 34 - 239
Target Start/End: Complemental strand, 38777 - 38576
Alignment:
Q  34 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagatttt 133  Q
    |||||||||||||||||||||||||||||||       ||||||    |||||||||||| ||||||||||| ||||||||||||||||| |||||||||    
T  38777 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcattcaaatttcgaaggattgtttaataa-tcagatttt 38683  T
Q  134 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgtt-ttttcttttaagattttac 232  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  38682 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtttttttcttttaagattttac 38583  T
Q  233 tatctct 239  Q
    |||||||    
T  38582 tatctct 38576  T

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Target: scaffold0004 (Bit Score: 129; Significance: 7e-67; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 34 - 239
Target Start/End: Original strand, 102129 - 102331
Alignment:
Q  34 tgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagatttt 133  Q
    |||||||||||||||||||||||||||||||       ||||||    |||||||||||| ||||||||||| ||| |||||||||||||||||||||||    
T  102129 tgtggtattcaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcattcaaatttcgaaagattgtttaataaatcagatttt 102224  T
Q  134 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattg-ttttttcttttaagattttac 232  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| ||||| |||||| ||||||||||||||    
T  102225 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaatatgagatttcttatgattgtttttttattttaagattttac 102324  T
Q  233 tatctct 239  Q
     ||||||    
T  102325 aatctct 102331  T

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Target: scaffold0037 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 100212 - 100449
Alignment:
Q  1 caatcaagattctttgtcatttnnnnnnngtcatgtggtattcaatcaagactcttaatcacttnnnnnnngtctagctagtggtattcaaaagcattca 100  Q
    ||||||||||||||||||||||       ||| ||||||| |||||||||||||||||||||||       ||||||    |||||||||||| ||||||    
T  100212 caatcaagattctttgtcatttaaaaaaagtcttgtggtactcaatcaagactcttaatcacttaaaaaaagtctag----tggtattcaaaatcattca 100307  T
Q  101 aattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 200  Q
    |||||  |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| || |||||||||||||||||||||||||||||    
T  100308 aatttcaaaggattgtttaataaatcaaattttgatggattttgtgggtttttctagtgaaattttaacaagaaaaagtctttcatgaaaacatgagatt 100407  T
Q  201 tcttaaga---ttgttttttcttttaagattttactatctct 239  Q
    ||||| ||   || ||||||||||||||||| ||||||||||    
T  100408 tcttaggactgtttttttttcttttaagattgtactatctct 100449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 100; Significance: 1e-49; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 79 - 222
Target Start/End: Complemental strand, 671 - 528
Alignment:
Q  79 tagtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaag 178  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| | |||||||||    
T  671 tagtggtattcaaaatcattcaaatttggaaggattgtttaataaatcatattttgatggattttgtggaattttctagtgaaattttggtatgaaaaag 572  T
Q  179 tctttcatgaaaacatgagatttcttaagattgttttttctttt 222  Q
    ||||| | ||||||||||||||||||| |||| |||||| ||||    
T  571 tctttgacgaaaacatgagatttcttaggatttttttttttttt 528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 10637 - 10772
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| |||||||||||  ||||||||||||||||||   ||||||||||||||| ||||||||| ||||| ||||||| || |||||||||    
T  10637 gtggtattcaaaatcattcaaatttcaaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtc 10736  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  10737 tttcatgaaaagatgagatttcttgagattgttttt 10772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 39747 - 39612
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| |||||||| || |||||||| ||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  39747 gtggtattcaaaatcattcaaacttcgaaggattatttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 39648  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| || ||||||||| |||||||||||    
T  39647 tttcatgaaaagataagatttcttgagattgttttt 39612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 81 - 217
Target Start/End: Original strand, 941 - 1076
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| |||| ||| |||||||||| ||||||||||||||||||||||||||| ||||| ||||||| |  |||||||||    
T  941 gtggtattcaaaatcattcaaatttcgaagaattatttaataaat-agattttgatggattttgtgggattttgtagtgtaattttaactagaaaaagtc 1039  T
Q  181 tttcatgaaaacatgagatttcttaagattgtttttt 217  Q
    |||||| |||| |||||||||||| ||||||||||||    
T  1040 tttcattaaaatatgagatttcttgagattgtttttt 1076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 58206 - 58071
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| ||||||||||| ||| |||||||||||||||  |||||||||||||||||||||||||| ||||  ||||||| || || ||| ||    
T  58206 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtataattttaacaagagaaaatc 58107  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  58106 tttcatgaaaagatgagatttcttgagattgttttt 58071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 83 - 213
Target Start/End: Complemental strand, 37035 - 36905
Alignment:
Q  83 ggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctt 182  Q
    ||||||||||| |||| |||||| |||| ||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||||    
T  37035 ggtattcaaaatcattaaaatttcgaagcattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctt 36936  T
Q  183 tcatgaaaacatgagatttcttaagattgtt 213  Q
    ||||||||| || ||||||||| ||||||||    
T  36935 tcatgaaaagataagatttcttgagattgtt 36905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 136 - 216
Target Start/End: Original strand, 14892 - 14972
Alignment:
Q  136 tggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgttttt 216  Q
    |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||||||||||||||    
T  14892 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttaagattgttttt 14972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 111 - 216
Target Start/End: Complemental strand, 3792 - 3687
Alignment:
Q  111 gattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagatt 210  Q
    |||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || ||||| ||||||||| |||| || | |||| || |||||    
T  3792 gattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaggtctttcataaaaagattatattttttgagatt 3693  T
Q  211 gttttt 216  Q
    ||||||    
T  3692 gttttt 3687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 141
Target Start/End: Original strand, 4277 - 4337
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggatt 141  Q
    ||||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||    
T  4277 gtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggatt 4337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 216
Target Start/End: Original strand, 13959 - 14084
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| |||||||||||  || |||||||||||||||  |||||||||||||||||          |||||  ||||||  | |||||||||    
T  13959 gtggtattcaaaatcattcaaatttcaaaagattgtttaataaattggattttgatggattttg----------tagtgggattttaataagaaaaagtc 14048  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  14049 tttcatgaaaagatgagatttcttgagattgttttt 14084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 21368 - 21243
Alignment:
Q  81 gtggtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 180  Q
    ||||||||||||| |||||||||||  || |||||||||||||||  ||||||||||||||||||          ||||  ||||||  | |||||||||    
T  21368 gtggtattcaaaatcattcaaatttcaaaagattgtttaataaattggattttgatggattttgt----------agtgggattttaataagaaaaagtc 21279  T
Q  181 tttcatgaaaacatgagatttcttaagattgttttt 216  Q
    ||||||||||| |||||||||||| |||||||||||    
T  21278 tttcatgaaaagatgagatttcttgagattgttttt 21243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 28510 - 28554
Alignment:
Q  172 gaaaaagtctttcatgaaaacatgagatttcttaagattgttttt 216  Q
    |||||||||||||||||||| |||||||||||| |||||||||||    
T  28510 gaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 28554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 84 - 177
Target Start/End: Original strand, 199905 - 199998
Alignment:
Q  84 gtattcaaaagcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaa 177  Q
    ||||| |||| ||||||||||||||| || ||||||||||||   |||||||| ||||||||| |||||| |||||||| ||||| || |||||    
T  199905 gtatttaaaatcattcaaattttgaaagagtgtttaataaattgaattttgattgattttgtgagattttttagtgaaactttagtataaaaaa 199998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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