View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10273_high_60 (Length: 238)
Name: NF10273_high_60
Description: NF10273
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10273_high_60 |
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Alignment Details
Target: chr7 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 44542746 - 44542963
Alignment:
| Q |
1 |
tcatacgatgtggcatcctcctcaagttgggatgttgaattttgaagagagtctttatcgtgagccaataataattgttggtggtgagactgaggatgga |
100 |
Q |
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| T |
44542746 |
tcatacgatgtggcatcctcctcaagttgggatgttgaattttgaagagagtgtttatcgtcagccaataataattgttggtggtgag------gatgga |
44542839 |
T |
|
| Q |
101 |
tgatgggttttttcttatgttgtttgcttccaaaagaagtcacagccatgaaacctgcaatggccaatgctccaccgaacacaagaagtcccgtaattcc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
44542840 |
tgatgggttttttcttatgttgtttgcttccaaaagaagtcacagccatgaaacctgcaatagccaatgctccaccgaacacaagaagtcccgtaattcc |
44542939 |
T |
|
| Q |
201 |
accttcaccaccaataattatact |
224 |
Q |
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|||||||||||||||| ||||||| |
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| T |
44542940 |
accttcaccaccaatagttatact |
44542963 |
T |
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