View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10273_low_66 (Length: 240)
Name: NF10273_low_66
Description: NF10273
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10273_low_66 |
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Alignment Details
Target: chr5 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 4891348 - 4891132
Alignment:
| Q |
1 |
taaattaagttaccaccttttgtttcccaatttaagagattgatgttccaatttatcatagaacaagacatgctttcgtatcgtctttatagcacggttt |
100 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |
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| T |
4891348 |
taaattaagttaccaccttttgtttcacaatttaagagattgatgttccaatttatcatagaacaagacttgctttcgtatcctctttatagcacggttt |
4891249 |
T |
|
| Q |
101 |
ctagtttctggtcaatttacttcgaggtccctaccaaggaattgtactattaaaatactattgtagatatggttattaaagtatttgtggttgcatgtat |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4891248 |
ctagtttctggtcaatttacttcgaggtccctaccaaggaattgtactattaaaatactattgtagatatggttattaaagtatttgtggttgcatgtat |
4891149 |
T |
|
| Q |
201 |
ttaaaatatgattaatg |
217 |
Q |
| |
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||||||||||||||||| |
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| T |
4891148 |
ttaaaatatgattaatg |
4891132 |
T |
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