View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10273_low_84 (Length: 227)
Name: NF10273_low_84
Description: NF10273
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10273_low_84 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 33763323 - 33763549
Alignment:
| Q |
1 |
atgtcacatcaacattaaacaaccacatgaacactttttcaatagagttggatgaaaagagggtaatggtaccgatattttataacttacatgaacgatt |
100 |
Q |
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| T |
33763323 |
atgtcacatcaacattaaacaaccaaatgaacactttttcaatagagttggatgaaaagagggtgatggtaccgatattttataacttacatgaacgatt |
33763422 |
T |
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| Q |
101 |
tgttttggnnnnnnnnctttaaagtactaaattcttacaaacatctaaaggaaaaataatactttcaataagaacaaacaaatgaaatcaataactaatg |
200 |
Q |
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|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33763423 |
tgttttggaaaaaaaactttaaagtactaaattcttacaaacatctaaaggaaaaataatactttcaataagaacaaacaaatgaaatcaataactaatg |
33763522 |
T |
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| Q |
201 |
ttttcaaacaaaataaaaagaaagtga |
227 |
Q |
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||||||||||||||||||||||||||| |
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| T |
33763523 |
ttttcaaacaaaataaaaagaaagtga |
33763549 |
T |
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