View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10273_low_86 (Length: 222)
Name: NF10273_low_86
Description: NF10273
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10273_low_86 |
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Alignment Details
Target: chr7 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 26 - 115
Target Start/End: Complemental strand, 45647217 - 45647128
Alignment:
| Q |
26 |
ttcatatagagcatataactttcatgctaattattacttatataagcaagattaattataaggatcgataagctggaaataattagttcc |
115 |
Q |
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| T |
45647217 |
ttcatatagagcatataactttcatgctaattattacttatataagcaagattaattataaggatcgataagctggaaataattagttcc |
45647128 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 212
Target Start/End: Complemental strand, 45647062 - 45647031
Alignment:
| Q |
181 |
caatcatgtaatttggcctaccaacacctttg |
212 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
45647062 |
caatcatgtaatttggcctaccaacacctttg |
45647031 |
T |
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