View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10274_high_19 (Length: 250)
Name: NF10274_high_19
Description: NF10274
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10274_high_19 |
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Alignment Details
Target: chr2 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 26 - 243
Target Start/End: Complemental strand, 8797015 - 8796798
Alignment:
| Q |
26 |
gaagataattattttgaaaacgatgtgtgtgtaattaatttctttgtacnnnnnnngtttgacaagtttggatctgatgagctgtgttgtataattgtac |
125 |
Q |
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| T |
8797015 |
gaagataattattttgaaaacgatgtgtgtgtaattaatttctttgtactttttttgtttgacaagtttggatctgatgagctgtgttgtataattgtac |
8796916 |
T |
|
| Q |
126 |
tttgaaactgtggccttttgttttcatttccatttattactaatattgacaaactatcatgtatattattgtaagtcaaaacccttttaagcatagatga |
225 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
8796915 |
tttgaaactgtggccttttgttttcatttccatttattactaatattgacaaactatcatgtatattattgtaagtcaaaacccttttaagcatatgtga |
8796816 |
T |
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| Q |
226 |
taaagacacttcatctca |
243 |
Q |
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|||||||||||||||||| |
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| T |
8796815 |
taaagacacttcatctca |
8796798 |
T |
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