View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10274_high_3 (Length: 484)
Name: NF10274_high_3
Description: NF10274
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10274_high_3 |
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Alignment Details
Target: chr2 (Bit Score: 440; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 440; E-Value: 0
Query Start/End: Original strand, 16 - 475
Target Start/End: Original strand, 36062245 - 36062704
Alignment:
| Q |
16 |
aagctcttctactactacaccttctttgaacttgacaatcacaaagtgcttgaattcctccatgactaccattttttgtgaagtaaagcttgctactagg |
115 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36062245 |
aagctcttctactactacaccttctttgaacttgacaatcacaaagtgcttgaattcctccatgactaccattttttgtgaagtaaagcttgctactagg |
36062344 |
T |
|
| Q |
116 |
agcctaatatataagcacaatttagggttcaaaggtcaaattaccttactgtcttgatctgtcaattgtcagaaccccacgactcatttcattactatgt |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
36062345 |
agcctaatatataagcacaatttagggttcaaaggtcaaattaccttactgtcttgatctgtcaattgtcagaaccccacgacttatttcattactatgt |
36062444 |
T |
|
| Q |
216 |
tggcaataatcaattatgtaacttctacacttcaaattcaaagtgtgtccaatgtccaacatgtgtcaacgtctaatacgatactaatacgatgtgatta |
315 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
36062445 |
tggcaataatcaattatgtaacttctacacttcaaatttaaagcgtgtccaatgtccaacatgtgtcaacgtctaatacaatactaatacgatgtgatta |
36062544 |
T |
|
| Q |
316 |
catttgattttatatttttacattattatcgatgtcgacgtgttagtatcggtgtatcacagtatccatatttttgcttcataagtaaccaattaataaa |
415 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36062545 |
catttgattttatatttttacattattatcgatgtcgacgtgttagtattggtgtatcacagtatccatatttttgcttcataagtaaccaattaataaa |
36062644 |
T |
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| Q |
416 |
aagttgtaggggacagcatccacagcttaatcttaggaaaggtactacatcttttcatct |
475 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36062645 |
aagttgtaggggacagcatccacagcttaatcttaggaaaggtactacatcttttcatct |
36062704 |
T |
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