View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10274_low_10 (Length: 370)
Name: NF10274_low_10
Description: NF10274
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10274_low_10 |
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Alignment Details
Target: chr4 (Bit Score: 321; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 21 - 361
Target Start/End: Original strand, 47290565 - 47290905
Alignment:
| Q |
21 |
ctagcctagttatcatggtcaggtatatagtgcccgagcgagcatcaagccaaaaaggttaagatactctatttggcaatgtaaattgatattaggtatt |
120 |
Q |
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| T |
47290565 |
ctagcctagttatcatggtcaggtatatagtgcccgagcgagcatcaagccaaaaaggttaagatactctatttggcaatgtaaattgatattaggtatt |
47290664 |
T |
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| Q |
121 |
gaacaaaacaccgaacatcaagtctaaaggtgaaggtttgctaacaggtcgagtaaattgacatgatgtaccaaacataagtttgggtgcccaccaagat |
220 |
Q |
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| T |
47290665 |
gaacacaacatcgagcatcaagtctaaaggtgaaggtttgctaacaggtcgagtaaattgacatgatgtaccaaacataagtttgggtggccaccaagat |
47290764 |
T |
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| Q |
221 |
tctagtctaaacatcattataagtcattgttgccatcaaaggtcaatggttgccctaatttgagggatagcctaatactttgggaattgtctaaagttta |
320 |
Q |
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| T |
47290765 |
tctagtctaaacatcattataagtcattgttgccatcaaaggtcaatggttgccctaatttgagggatagcctaatactttgggaattgtctaaagttta |
47290864 |
T |
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| Q |
321 |
ctgtctttttctatccaatatccttttatagtgtttcatct |
361 |
Q |
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| T |
47290865 |
ctgtctctttctatccaatatccttttatagtgtttcatct |
47290905 |
T |
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