View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10274_low_22 (Length: 265)
Name: NF10274_low_22
Description: NF10274
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10274_low_22 |
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Alignment Details
Target: chr7 (Bit Score: 104; Significance: 6e-52; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 13 - 116
Target Start/End: Original strand, 26743755 - 26743858
Alignment:
| Q |
13 |
caaagggcattgtattctttatagttaaatagaagaagcaaagaataaacgtaacaggaaatattcttgtctcttcggtcttacttgctttacttctaaa |
112 |
Q |
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| T |
26743755 |
caaagggcattgtattctttatagttaaatagaagaagcaaagaataaacgtaacaggaaatattcttgtctcttcggtcttacttgctttacttctaaa |
26743854 |
T |
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| Q |
113 |
cata |
116 |
Q |
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|||| |
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| T |
26743855 |
cata |
26743858 |
T |
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Target: chr7; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 132 - 250
Target Start/End: Original strand, 26746262 - 26746380
Alignment:
| Q |
132 |
atatgaagattaaattcctctatatgttcgaaacaatcatataaacgtcaatagaaaccaataataagcatggtagttgaagaagaaaaatgaggaccag |
231 |
Q |
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||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
26746262 |
atatgaagattaaattcctttatatgttcgaaacaatcatataaacggcaatagaaaccaataataagcatagtagttgaagaagaaaaatgaggaccag |
26746361 |
T |
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| Q |
232 |
cctataacacaaatgaagt |
250 |
Q |
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||||||||| ||||||||| |
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| T |
26746362 |
cctataacataaatgaagt |
26746380 |
T |
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