View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10277_low_5 (Length: 427)

Name: NF10277_low_5
Description: NF10277
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10277_low_5
NF10277_low_5
[»] chr8 (53 HSPs)
chr8 (18-410)||(25580771-25581163)
chr8 (18-147)||(6108028-6108157)
chr8 (18-149)||(17841643-17841774)
chr8 (18-147)||(26041908-26042037)
chr8 (18-147)||(40779924-40780053)
chr8 (47-147)||(32064916-32065016)
chr8 (18-148)||(3596835-3596965)
chr8 (17-146)||(14128999-14129128)
chr8 (47-147)||(15187730-15187830)
chr8 (47-150)||(10044518-10044621)
chr8 (47-150)||(42754834-42754937)
chr8 (53-147)||(1503638-1503732)
chr8 (47-147)||(37985851-37985951)
chr8 (47-145)||(24211169-24211267)
chr8 (47-147)||(1645759-1645859)
chr8 (18-145)||(20091598-20091725)
chr8 (47-149)||(30055686-30055788)
chr8 (47-145)||(34665551-34665649)
chr8 (48-145)||(38017103-38017201)
chr8 (19-135)||(35353183-35353299)
chr8 (47-136)||(39772608-39772697)
chr8 (48-145)||(37132477-37132575)
chr8 (59-147)||(31347571-31347659)
chr8 (47-135)||(32394027-32394114)
chr8 (47-122)||(8454003-8454078)
chr8 (57-147)||(7022159-7022249)
chr8 (55-116)||(41819594-41819655)
chr8 (55-144)||(3890412-3890502)
chr8 (57-147)||(7017653-7017743)
chr8 (67-147)||(30834850-30834931)
chr8 (71-144)||(24844847-24844920)
chr8 (71-143)||(8453838-8453911)
chr8 (71-143)||(26042104-26042177)
chr8 (71-143)||(32064749-32064822)
chr8 (71-143)||(34665386-34665459)
chr8 (47-149)||(24844653-24844756)
chr8 (71-143)||(17841838-17841911)
chr8 (71-143)||(20091789-20091862)
chr8 (71-143)||(31347770-31347843)
chr8 (71-143)||(40780117-40780190)
chr8 (71-135)||(42755030-42755095)
chr8 (71-142)||(25581227-25581299)
chr8 (71-116)||(3817918-3817963)
chr8 (71-143)||(7017853-7017926)
chr8 (71-135)||(7021990-7022055)
chr8 (71-143)||(14128868-14128941)
chr8 (71-143)||(15187564-15187637)
chr8 (50-107)||(27835288-27835345)
chr8 (71-143)||(32393862-32393935)
chr8 (71-143)||(35353045-35353118)
chr8 (71-143)||(37986043-37986116)
chr8 (71-135)||(30835035-30835099)
chr8 (80-135)||(38016983-38017039)
[»] chr1 (36 HSPs)
chr1 (18-147)||(41876237-41876366)
chr1 (18-148)||(37821628-37821758)
chr1 (18-147)||(51737646-51737775)
chr1 (47-149)||(25973577-25973679)
chr1 (18-147)||(19015545-19015674)
chr1 (18-147)||(36966503-36966632)
chr1 (18-147)||(6883628-6883757)
chr1 (47-147)||(20304925-20305025)
chr1 (18-146)||(40215129-40215257)
chr1 (47-147)||(44094867-44094967)
chr1 (47-148)||(9910085-9910186)
chr1 (18-147)||(25463817-25463946)
chr1 (47-147)||(3559787-3559887)
chr1 (47-147)||(18404618-18404718)
chr1 (71-148)||(19722893-19722970)
chr1 (57-149)||(32000059-32000151)
chr1 (57-147)||(33786426-33786516)
chr1 (57-145)||(40273888-40273976)
chr1 (50-145)||(44690818-44690914)
chr1 (47-147)||(10167569-10167670)
chr1 (71-144)||(33786623-33786696)
chr1 (71-143)||(40273706-40273779)
chr1 (75-146)||(52064373-52064445)
chr1 (71-143)||(16045786-16045859)
chr1 (71-143)||(32000255-32000328)
chr1 (71-143)||(40214992-40215065)
chr1 (55-109)||(52329453-52329507)
chr1 (71-143)||(18404446-18404519)
chr1 (71-143)||(25463680-25463753)
chr1 (71-143)||(44094702-44094775)
chr1 (71-143)||(6883491-6883564)
chr1 (71-143)||(9910281-9910354)
chr1 (71-143)||(19015408-19015481)
chr1 (55-147)||(27523050-27523143)
chr1 (71-143)||(36966696-36966769)
chr1 (71-143)||(37821822-37821895)
[»] chr5 (33 HSPs)
chr5 (18-149)||(33584122-33584253)
chr5 (18-147)||(4892343-4892472)
chr5 (18-147)||(25398379-25398508)
chr5 (47-149)||(6043305-6043407)
chr5 (47-148)||(8145543-8145644)
chr5 (47-147)||(3521802-3521902)
chr5 (47-146)||(3362949-3363048)
chr5 (47-144)||(12850972-12851069)
chr5 (18-147)||(37321588-37321717)
chr5 (18-150)||(38899517-38899650)
chr5 (47-147)||(14138837-14138937)
chr5 (18-148)||(2477777-2477907)
chr5 (47-147)||(12614532-12614633)
chr5 (57-147)||(22912852-22912942)
chr5 (18-126)||(11360947-11361055)
chr5 (57-147)||(17545477-17545567)
chr5 (47-105)||(4433845-4433903)
chr5 (71-130)||(27482017-27482077)
chr5 (71-143)||(12614721-12614794)
chr5 (71-143)||(22913042-22913115)
chr5 (54-109)||(13664736-13664791)
chr5 (71-143)||(2477640-2477713)
chr5 (71-143)||(6043499-6043572)
chr5 (71-135)||(8145387-8145452)
chr5 (71-143)||(11361119-11361192)
chr5 (76-135)||(10458409-10458469)
chr5 (71-143)||(3362782-3362855)
chr5 (71-143)||(4433995-4434068)
chr5 (71-143)||(4892206-4892279)
chr5 (71-116)||(17545673-17545718)
chr5 (71-143)||(25398242-25398315)
chr5 (71-143)||(38899714-38899787)
chr5 (117-145)||(12614483-12614511)
[»] chr2 (31 HSPs)
chr2 (47-150)||(10662058-10662161)
chr2 (18-149)||(33380348-33380479)
chr2 (18-150)||(7475300-7475432)
chr2 (18-147)||(23267857-23267986)
chr2 (47-148)||(35160929-35161030)
chr2 (47-150)||(9293367-9293470)
chr2 (18-143)||(3989217-3989342)
chr2 (47-147)||(13355018-13355118)
chr2 (47-144)||(31174633-31174730)
chr2 (47-147)||(22592880-22592983)
chr2 (57-147)||(43331092-43331182)
chr2 (57-149)||(9723586-9723679)
chr2 (57-145)||(21393483-21393570)
chr2 (47-116)||(16767288-16767357)
chr2 (18-106)||(21936223-21936311)
chr2 (102-149)||(39819272-39819319)
chr2 (57-147)||(34320963-34321042)
chr2 (57-126)||(37335824-37335894)
chr2 (71-143)||(14941354-14941427)
chr2 (47-107)||(14941199-14941259)
chr2 (71-143)||(7475496-7475569)
chr2 (71-143)||(9293564-9293637)
chr2 (71-143)||(10661891-10661964)
chr2 (71-143)||(21936085-21936158)
chr2 (71-143)||(23268050-23268123)
chr2 (71-135)||(27847644-27847709)
chr2 (71-135)||(31174822-31174887)
chr2 (71-143)||(35160761-35160834)
chr2 (71-143)||(43330916-43330989)
chr2 (71-143)||(9723409-9723482)
chr2 (122-150)||(21936313-21936341)
[»] chr4 (48 HSPs)
chr4 (18-147)||(46441985-46442114)
chr4 (47-150)||(36073519-36073622)
chr4 (18-147)||(53123172-53123301)
chr4 (21-149)||(44893570-44893698)
chr4 (18-145)||(9089011-9089138)
chr4 (21-147)||(44893008-44893134)
chr4 (18-147)||(47290207-47290336)
chr4 (47-147)||(21802115-21802215)
chr4 (18-145)||(24128380-24128507)
chr4 (18-147)||(50156374-50156502)
chr4 (47-147)||(2625007-2625107)
chr4 (47-147)||(22199429-22199529)
chr4 (47-147)||(36073121-36073221)
chr4 (47-147)||(49387682-49387782)
chr4 (18-147)||(31078614-31078743)
chr4 (47-147)||(4751617-4751717)
chr4 (48-147)||(10442582-10442682)
chr4 (18-147)||(7744907-7745036)
chr4 (47-147)||(33530479-33530579)
chr4 (47-145)||(17655600-17655699)
chr4 (47-137)||(23964269-23964359)
chr4 (50-147)||(11314046-11314144)
chr4 (57-145)||(24392854-24392942)
chr4 (49-147)||(42671840-42671939)
chr4 (47-147)||(37219801-37219902)
chr4 (47-147)||(37934736-37934837)
chr4 (18-116)||(30563350-30563448)
chr4 (95-149)||(25063367-25063422)
chr4 (71-143)||(33530676-33530749)
chr4 (71-143)||(10442777-10442850)
chr4 (71-143)||(31078807-31078880)
chr4 (55-146)||(44744610-44744698)
chr4 (71-143)||(49387876-49387949)
chr4 (55-150)||(36073253-36073349)
chr4 (71-143)||(2624841-2624914)
chr4 (71-143)||(7745100-7745173)
chr4 (71-143)||(21802310-21802383)
chr4 (71-143)||(22199265-22199338)
chr4 (71-143)||(24392671-24392744)
chr4 (71-143)||(36072951-36073024)
chr4 (71-143)||(46441848-46441921)
chr4 (71-143)||(47290070-47290143)
chr4 (71-134)||(36073731-36073795)
chr4 (71-143)||(53123034-53123108)
chr4 (71-143)||(4751450-4751523)
chr4 (71-143)||(24128243-24128316)
chr4 (71-143)||(36073354-36073427)
chr4 (71-143)||(44893430-44893503)
[»] scaffold0228 (6 HSPs)
scaffold0228 (21-147)||(26080-26206)
scaffold0228 (21-147)||(16128-16254)
scaffold0228 (21-80)||(8546-8605)
scaffold0228 (71-135)||(8414-8479)
scaffold0228 (71-135)||(15996-16061)
scaffold0228 (71-135)||(25948-26013)
[»] chr6 (31 HSPs)
chr6 (18-147)||(32702346-32702475)
chr6 (47-148)||(18365368-18365469)
chr6 (47-148)||(18370632-18370733)
chr6 (18-147)||(17175816-17175945)
chr6 (47-147)||(28675318-28675418)
chr6 (47-147)||(33696867-33696967)
chr6 (47-149)||(33695119-33695221)
chr6 (47-147)||(17705264-17705363)
chr6 (47-147)||(23290876-23290976)
chr6 (47-149)||(2309216-2309318)
chr6 (50-145)||(6031537-6031632)
chr6 (57-145)||(11548386-11548474)
chr6 (47-109)||(18889477-18889539)
chr6 (47-147)||(29693615-29693716)
chr6 (47-106)||(6127447-6127506)
chr6 (81-146)||(34238883-34238948)
chr6 (69-149)||(582520-582602)
chr6 (71-143)||(17176009-17176082)
chr6 (71-143)||(17705453-17705526)
chr6 (71-143)||(33695315-33695388)
chr6 (71-143)||(33696700-33696773)
chr6 (95-149)||(2121002-2121057)
chr6 (71-143)||(6127279-6127352)
chr6 (71-143)||(23291072-23291145)
chr6 (71-143)||(28675152-28675225)
chr6 (71-141)||(11548576-11548647)
chr6 (81-143)||(25986934-25986997)
chr6 (71-143)||(18365561-18365634)
chr6 (71-143)||(18370825-18370898)
chr6 (47-79)||(9752109-9752141)
chr6 (71-143)||(18889685-18889757)
[»] chr3 (40 HSPs)
chr3 (18-147)||(3137209-3137338)
chr3 (47-147)||(34482683-34482783)
chr3 (47-149)||(19650693-19650795)
chr3 (18-148)||(37522194-37522324)
chr3 (18-152)||(3574316-3574450)
chr3 (47-149)||(30385570-30385672)
chr3 (17-147)||(37216848-37216978)
chr3 (18-147)||(3456205-3456334)
chr3 (47-147)||(22426140-22426240)
chr3 (47-147)||(33113964-33114064)
chr3 (47-146)||(8320378-8320477)
chr3 (47-148)||(3089589-3089690)
chr3 (47-147)||(6042047-6042147)
chr3 (47-147)||(48161076-48161176)
chr3 (47-149)||(2754889-2754991)
chr3 (47-145)||(33145882-33145980)
chr3 (55-147)||(36864827-36864920)
chr3 (47-150)||(47738281-47738385)
chr3 (57-147)||(40328011-40328102)
chr3 (57-147)||(8361834-8361924)
chr3 (47-149)||(26612916-26613019)
chr3 (47-135)||(33839705-33839794)
chr3 (57-147)||(9796824-9796914)
chr3 (48-150)||(24343720-24343823)
chr3 (47-145)||(42921295-42921394)
chr3 (57-147)||(41224414-41224504)
chr3 (47-150)||(42298032-42298125)
chr3 (47-146)||(46919064-46919164)
chr3 (71-143)||(6041888-6041961)
chr3 (71-143)||(2754721-2754794)
chr3 (71-143)||(3137402-3137475)
chr3 (71-143)||(3574515-3574588)
chr3 (71-135)||(9797017-9797082)
chr3 (71-143)||(33145717-33145789)
chr3 (58-132)||(41883031-41883106)
chr3 (71-116)||(8362033-8362078)
chr3 (71-143)||(11347272-11347345)
chr3 (47-84)||(11347439-11347476)
chr3 (71-143)||(37217041-37217114)
chr3 (71-135)||(47738117-47738182)
[»] scaffold0204 (2 HSPs)
scaffold0204 (18-150)||(4537-4669)
scaffold0204 (71-143)||(4400-4473)
[»] chr7 (33 HSPs)
chr7 (47-147)||(35445567-35445667)
chr7 (18-147)||(48880722-48880851)
chr7 (47-150)||(30848739-30848842)
chr7 (47-149)||(24395141-24395243)
chr7 (47-147)||(3962148-3962248)
chr7 (47-147)||(45637881-45637981)
chr7 (50-147)||(15577642-15577739)
chr7 (47-147)||(15329444-15329544)
chr7 (47-147)||(34483008-34483108)
chr7 (47-150)||(35876414-35876517)
chr7 (18-147)||(42611952-42612081)
chr7 (63-147)||(25167651-25167735)
chr7 (47-145)||(4974532-4974630)
chr7 (55-147)||(42696261-42696354)
chr7 (47-138)||(29737314-29737406)
chr7 (57-147)||(15238564-15238654)
chr7 (57-146)||(37476876-37476965)
chr7 (50-145)||(20009895-20009991)
chr7 (57-147)||(18037157-18037247)
chr7 (71-143)||(15329277-15329350)
chr7 (71-143)||(48880915-48880988)
chr7 (71-143)||(4974723-4974796)
chr7 (71-143)||(42611815-42611888)
chr7 (71-143)||(45637716-45637789)
chr7 (83-150)||(36790268-36790336)
chr7 (74-143)||(15577841-15577911)
chr7 (71-143)||(3961983-3962056)
chr7 (71-143)||(20010086-20010158)
chr7 (71-143)||(34482839-34482912)
chr7 (71-116)||(15238414-15238459)
chr7 (71-143)||(24394976-24395049)
chr7 (71-143)||(35444562-35444635)
chr7 (120-148)||(40880640-40880668)
[»] scaffold0085 (2 HSPs)
scaffold0085 (47-150)||(48019-48122)
scaffold0085 (71-143)||(47854-47927)
[»] scaffold0471 (2 HSPs)
scaffold0471 (18-145)||(12983-13110)
scaffold0471 (71-143)||(12846-12919)
[»] scaffold0178 (2 HSPs)
scaffold0178 (47-148)||(11791-11892)
scaffold0178 (71-143)||(11625-11698)
[»] scaffold0096 (2 HSPs)
scaffold0096 (47-148)||(41180-41281)
scaffold0096 (71-143)||(41015-41088)
[»] scaffold0665 (1 HSPs)
scaffold0665 (71-143)||(3072-3145)
[»] scaffold0041 (1 HSPs)
scaffold0041 (120-148)||(85615-85643)


Alignment Details
Target: chr8 (Bit Score: 348; Significance: 0; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 348; E-Value: 0
Query Start/End: Original strand, 18 - 410
Target Start/End: Complemental strand, 25581163 - 25580771
Alignment:
Q  18 gggtggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctta 117  Q
    |||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25581163 gggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctta 25581064  T
Q  118 taaaatcattcttgatatctagcattttccattgatagattgtatatatattttattgtaaattcctcaatgaggttattggttgtcacaaaacttatct 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25581063 taaaatcattcttgatatctagcattttccattgatagattgtatatatattttattgtaaattcctcaatgaggttattggttgtcacaaaacttatct 25580964  T
Q  218 ctcctaatttgaattgtaatcatataagaaaaattaataacacaaaaataattaacttcaacaatacaagagtttgaatttgtattatcatttttactac 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25580963 ctcctaatttgaattgtaatcatataagaaaaattaataacacaaaaataattaacttcaacaatacaagagtttgaatttgtattatcatttttactac 25580864  T
Q  318 ttacttttcaaattaaacaatttcatataaattnnnnnnntagttagttatgcatgaaaagtgaggagttataagttatattaaatattatag 410  Q
    |||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25580863 ttacttttcaaattaaacaatttcatataaattaaaaaaatagttagttatgcatgaaaagtgaggagttataagttatattaaatattatag 25580771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 6108157 - 6108028
Alignment:
Q  18 gggtggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctta 117  Q
    |||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  6108157 gggtggtgggtgttatgtatcttctttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttctta 6108058  T
Q  118 taaaatcattcttgatatctagcattttcc 147  Q
    ||||||||||||||||||||||||||||||    
T  6108057 taaaatcattcttgatatctagcattttcc 6108028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 17841774 - 17841643
Alignment:
Q  18 gggtggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctta 117  Q
    |||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  17841774 gggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctta 17841675  T
Q  118 taaaatcattcttgatatctagcattttccat 149  Q
    ||||||||||||||||||||||||||||||||    
T  17841674 taaaatcattcttgatatctagcattttccat 17841643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 26042037 - 26041908
Alignment:
Q  18 gggtggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctta 117  Q
    |||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  26042037 gggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctta 26041938  T
Q  118 taaaatcattcttgatatctagcattttcc 147  Q
    ||||||||||||||||||||||||||||||    
T  26041937 taaaatcattcttgatatctagcattttcc 26041908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 40780053 - 40779924
Alignment:
Q  18 gggtggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctta 117  Q
    ||||||||| |||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  40780053 gggtggtggatgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctta 40779954  T
Q  118 taaaatcattcttgatatctagcattttcc 147  Q
    ||||||||||||||||||||||||||||||    
T  40779953 taaaatcattcttgatatctagcattttcc 40779924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 32064916 - 32065016
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  32064916 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 32065015  T
Q  147 c 147  Q
    |    
T  32065016 c 32065016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 18 - 148
Target Start/End: Complemental strand, 3596965 - 3596835
Alignment:
Q  18 gggtggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctta 117  Q
    |||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||  || |||||||| |||||||||||    
T  3596965 gggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatatcattcttaaatttttctta 3596866  T
Q  118 taaaatcattcttgatatctagcattttcca 148  Q
    |||||||||||||||||||||||||||||||    
T  3596865 taaaatcattcttgatatctagcattttcca 3596835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 146
Target Start/End: Original strand, 14128999 - 14129128
Alignment:
Q  17 agggtggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctt 116  Q
    |||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||    
T  14128999 agggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatatttctt 14129098  T
Q  117 ataaaatcattcttgatatctagcattttc 146  Q
    ||||||||||||||||||||||||||||||    
T  14129099 ataaaatcattcttgatatctagcattttc 14129128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 15187730 - 15187830
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  15187730 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 15187829  T
Q  147 c 147  Q
    |    
T  15187830 c 15187830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 47 - 150
Target Start/End: Original strand, 10044518 - 10044621
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10044518 atgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 10044617  T
Q  147 catt 150  Q
    ||||    
T  10044618 catt 10044621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 47 - 150
Target Start/End: Complemental strand, 42754937 - 42754834
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||   ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  42754937 atgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 42754838  T
Q  147 catt 150  Q
    ||||    
T  42754837 catt 42754834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 53 - 147
Target Start/End: Complemental strand, 1503732 - 1503638
Alignment:
Q  53 gattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 147  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1503732 gattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 1503638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 37985951 - 37985851
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    |||||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  37985951 atgaaagattaataaatgggactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 37985852  T
Q  147 c 147  Q
    |    
T  37985851 c 37985851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 47 - 145
Target Start/End: Complemental strand, 24211267 - 24211169
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 145  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| || |||||||||||||||||||||||||||||||||||    
T  24211267 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcatttt 24211169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 1645859 - 1645759
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||  | ||||||||||||||||||||||||||||||||||||    
T  1645859 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggttctttcttataaaatcattcttgatatctagcattttc 1645760  T
Q  147 c 147  Q
    |    
T  1645759 c 1645759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 145
Target Start/End: Complemental strand, 20091725 - 20091598
Alignment:
Q  18 gggtggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctta 117  Q
    ||||||||||||||||||||         ||||||| |||||||||||||||||||||||| |||||||||||||  ||||||||||||||| |||||||    
T  20091725 gggtggtgggtgttatgtattttttttttatgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttctta 20091626  T
Q  118 taaaatcattcttgatatctagcatttt 145  Q
    ||||||||||||||||||||||||||||    
T  20091625 taaaatcattcttgatatctagcatttt 20091598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 47 - 149
Target Start/End: Original strand, 30055686 - 30055788
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    ||||||| ||||||||||||||| |||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  30055686 atgaaaggttaataaatgagactaaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 30055785  T
Q  147 cat 149  Q
    |||    
T  30055786 cat 30055788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 47 - 145
Target Start/End: Original strand, 34665551 - 34665649
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 145  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  34665551 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 34665649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 48 - 145
Target Start/End: Original strand, 38017103 - 38017201
Alignment:
Q  48 tgaaagattaataaatgagactgaaatctaaaggtga-ttattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 145  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  38017103 tgaaagattaataaatgagactgaaatctaaaggtaaattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 38017201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 35353183 - 35353299
Alignment:
Q  19 ggtggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttat 118  Q
    ||||||||||||||||||||        ||||||||||||||||||||| | |||| |||||||||||||||||  ||||||||||||||||||||||||    
T  35353183 ggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagattaaaatttaaaggtgattattgtgccatgtcattcttgaatttttcttat 35353282  T
Q  119 aaaatcattcttgatat 135  Q
    |||||||||||||||||    
T  35353283 aaaatcattcttgatat 35353299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 47 - 136
Target Start/End: Complemental strand, 39772697 - 39772608
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatc 136  Q
    |||||||||||||||| || ||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||    
T  39772697 atgaaagattaataaacgaaactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttcttataaaatcattcttgatatc 39772608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 48 - 145
Target Start/End: Complemental strand, 37132575 - 37132477
Alignment:
Q  48 tgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 145  Q
    |||||| ||||||||| |||||||||||||| |||||||||||||| ||||||||| ||||| |||||| |||||||||||||||||||||||||||||    
T  37132575 tgaaaggttaataaataagactgaaatctaagggtgattattgtgtcatgtcattcatgaatctttcttgataaaatcattcttgatatctagcatttt 37132477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 59 - 147
Target Start/End: Complemental strand, 31347659 - 31347571
Alignment:
Q  59 taaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 147  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||   ||||||||||||||||||||||||||||    
T  31347659 taaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 31347571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 32394027 - 32394114
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatat 135  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||| ||| |||||||||||||||||||||    
T  32394027 atgaaagattaataaatgagactgaaatctaaaggtgattattgtg-catgtcattcttaaatattttttataaaatcattcttgatat 32394114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 8454003 - 8454078
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaa 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||    
T  8454003 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaattcttcttataaaa 8454078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 57 - 147
Target Start/End: Original strand, 7022159 - 7022249
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 147  Q
    |||||||||||||||||||||| || ||||||||||   |||||||||||||| ||||||   |||||||| |||||||||||||||||||    
T  7022159 aataaatgagactgaaatctaagggcgattattgtgacttgtcattcttgaatctttcttgataaatcattgttgatatctagcattttcc 7022249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 41819655 - 41819594
Alignment:
Q  55 ttaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctt 116  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||    
T  41819655 ttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttctt 41819594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 55 - 144
Target Start/End: Complemental strand, 3890502 - 3890412
Alignment:
Q  55 ttaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattt 144  Q
    ||||||||| ||| | |||||||| |||||||||| ||  || |||||||||||| |||||| ||||||||||||||||||||||||||||    
T  3890502 ttaataaataagattaaaatctaatggtgattattctgccatatcattcttgaatctttcttgataaaatcattcttgatatctagcattt 3890412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 57 - 147
Target Start/End: Complemental strand, 7017743 - 7017653
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 147  Q
    |||||||||||||||||||||| | |||||||| |   ||||||||||| ||| ||||||   ||||||||||||||||||||||||||||    
T  7017743 aataaatgagactgaaatctaaggatgattattataaaatgtcattcttaaatatttcttgataaatcattcttgatatctagcattttcc 7017653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 67 - 147
Target Start/End: Complemental strand, 30834931 - 30834850
Alignment:
Q  67 actgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 147  Q
    |||||||||||| |||| ||||| ||| ||||||||||| ||| |||||| |||||||||||||||||||||| ||||||||    
T  30834931 actgaaatctaagggtggttattctgtcatgtcattctttaatctttcttgataaaatcattcttgatatctatcattttcc 30834850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 71 - 144
Target Start/End: Original strand, 24844847 - 24844920
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattt 144  Q
    |||||||| |||||||||| ||| |||||||||||||||||||||| |||||||  |||||||||| ||||||||    
T  24844847 aaatctaagggtgattatt-tgtcatgtcattcttgaatttttcttaataaaatatttcttgatatgtagcattt 24844920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 8453911 - 8453838
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||| |||||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  8453911 aaatctaagggtgattattttgtcatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 8453838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 26042104 - 26042177
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||| |||||||||||||| ||||||| |||||||| ||||| |||| |||||||    
T  26042104 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttaatatatagcatt 26042177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 32064822 - 32064749
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  |||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  32064822 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 32064749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 34665459 - 34665386
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  |||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  34665459 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 34665386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 47 - 149
Target Start/End: Complemental strand, 24844756 - 24844653
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 145  Q
    ||||||| ||||||| | ||| | ||||||||  ||||||||| ||  ||| ||||||| ||| |||||| ||||||||||| |||||||||| ||||||    
T  24844756 atgaaaggttaataattaagattaaaatctaagagtgattattttgccatgccattcttaaatctttcttgataaaatcattattgatatctaacatttt 24844657  T
Q  146 ccat 149  Q
    ||||    
T  24844656 ccat 24844653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 17841838 - 17841911
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  |||||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  17841838 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 17841911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 20091789 - 20091862
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  |||||||||||||| ||||||| |||||||  |||||||||| |||||||    
T  20091789 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcatt 20091862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 31347770 - 31347843
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  |||||||||||||||||||||| | |||||  |||||||||| |||||||    
T  31347770 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatatttcttgatatatagcatt 31347843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 40780117 - 40780190
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  |||||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  40780117 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 40780190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 42755030 - 42755095
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| ||  |||||||||||||| ||||||| |||||||| ||||||||||    
T  42755030 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 42755095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 142
Target Start/End: Original strand, 25581227 - 25581299
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcat 142  Q
    ||||||||||||||||||| ||  |||||||||||||| |||||||  ||||| | |||||||||| ||||||    
T  25581227 aaatctaaaggtgattattttgccatgtcattcttgaaattttcttcgtaaaaactttcttgatatatagcat 25581299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 116
Target Start/End: Original strand, 3817918 - 3817963
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt 116  Q
    |||||||| |||||||||| ||| |||| |||||||||||||||||    
T  3817918 aaatctaagggtgattattctgtcatgtaattcttgaatttttctt 3817963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 7017853 - 7017926
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| | |||||||| ||  |||||||||||||||||||||| | |||||| ||| |||||| |||||||    
T  7017853 aaatctaaggatgattattctgccatgtcattcttgaatttttcttaagaaaatctttcatgatatatagcatt 7017926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 7022055 - 7021990
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| ||  || ||||||||||||||||||| | |||||| ||||||||||    
T  7022055 aaatctaagggtgattattctgccatatcattcttgaatttttcttgagaaaatctttcttgatat 7021990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 14128941 - 14128868
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  ||||||||||| || |||| || |||||||| |||||||||| |||||||    
T  14128941 aaatctaagggtgattattctgccatgtcattcttaaaattttattgataaaatctttcttgatatatagcatt 14128868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 15187637 - 15187564
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| ||| |||||| ||  || ||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  15187637 aaatctaagggtaattattctgccatatcattcttgaaattttcttgataaaatctttcttgatatatagcatt 15187564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 107
Target Start/End: Complemental strand, 27835345 - 27835288
Alignment:
Q  50 aaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttga 107  Q
    |||| ||||||||||||| |||||||||| | |||||||||||| || ||||| ||||    
T  27835345 aaaggttaataaatgagattgaaatctaaggatgattattgtgtcatatcatttttga 27835288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 32393935 - 32393862
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||| ||| |||||||||| ||  ||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  32393935 aaatttaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 32393862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 35353118 - 35353045
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  ||||||||||| || ||||||| | |||||| |||||||||| |||||||    
T  35353118 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 35353045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 37986043 - 37986116
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattctt-gaatttttcttataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  |||||||||||  ||||||| | |||||||| |||||||||| |||||||    
T  37986043 aaatctaagggtgattattctgccatgtcattcttaaaatttttttgataaaatctttcttgatatatagcatt 37986116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 30835035 - 30835099
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatat 135  Q
    ||||| || |||||||||| ||  |||||||||||||||||||   |||||||| ||||||||||    
T  30835035 aaatcaaagggtgattattctgccatgtcattcttgaattttttcgataaaatctttcttgatat 30835099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 135
Target Start/End: Complemental strand, 38017039 - 38016983
Alignment:
Q  80 ggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatat 135  Q
    |||||||||| ||  |||||||||||||| ||||||| |||||||| ||||||||||    
T  38017039 ggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 38016983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 102; Significance: 2e-50; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 41876366 - 41876237
Alignment:
Q  18 gggtggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctta 117  Q
    |||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41876366 gggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttgaatttttctta 41876267  T
Q  118 taaaatcattcttgatatctagcattttcc 147  Q
    ||||||||||||||||||||||||||||||    
T  41876266 taaaatcattcttgatatctagcattttcc 41876237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 18 - 148
Target Start/End: Complemental strand, 37821758 - 37821628
Alignment:
Q  18 gggtggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctta 117  Q
    ||||| |||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  37821758 gggtgttgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttctta 37821659  T
Q  118 taaaatcattcttgatatctagcattttcca 148  Q
    |||||||||||||||||||||||||||||||    
T  37821658 taaaatcattcttgatatctagcattttcca 37821628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 51737646 - 51737775
Alignment:
Q  18 gggtggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctta 117  Q
    |||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  51737646 gggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctta 51737745  T
Q  118 taaaatcattcttgatatctagcattttcc 147  Q
    ||||||||||||||||||||||||||||||    
T  51737746 taaaatcattcttgatatctagcattttcc 51737775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 47 - 149
Target Start/End: Original strand, 25973577 - 25973679
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25973577 atgaaagattaataaatgagactgaaatttaaaggtgattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 25973676  T
Q  147 cat 149  Q
    |||    
T  25973677 cat 25973679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 19015545 - 19015674
Alignment:
Q  18 gggtggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctta 117  Q
    |||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  19015545 gggtggtgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctta 19015644  T
Q  118 taaaatcattcttgatatctagcattttcc 147  Q
    |||||||||||||||||| |||||||||||    
T  19015645 taaaatcattcttgatatgtagcattttcc 19015674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 36966632 - 36966503
Alignment:
Q  18 gggtggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctta 117  Q
    |||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||    
T  36966632 gggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgttattcttgaatttttctta 36966533  T
Q  118 taaaatcattcttgatatctagcattttcc 147  Q
    ||||||||||||||||||||||||||||||    
T  36966532 taaaatcattcttgatatctagcattttcc 36966503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 6883628 - 6883757
Alignment:
Q  18 gggtggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctta 117  Q
    |||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||| |||| ||  |||||||||||||||||||||||    
T  6883628 gggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgaatattatgccatgtcattcttgaatttttctta 6883727  T
Q  118 taaaatcattcttgatatctagcattttcc 147  Q
    ||||||||||||||||||||||||||||||    
T  6883728 taaaatcattcttgatatctagcattttcc 6883757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 20305025 - 20304925
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    |||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  20305025 atgaaagattgataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 20304926  T
Q  147 c 147  Q
    |    
T  20304925 c 20304925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 18 - 146
Target Start/End: Original strand, 40215129 - 40215257
Alignment:
Q  18 gggtggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctta 117  Q
    ||||||||||||||||||||         |||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||    
T  40215129 gggtggtgggtgttatgtattttttttttatgaaatattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttctta 40215228  T
Q  118 taaaatcattcttgatatctagcattttc 146  Q
    |||||||||||||||||||||||||||||    
T  40215229 taaaatcattcttgatatctagcattttc 40215257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 44094867 - 44094967
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||| ||||||||||||||||||||||    
T  44094867 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttcttataaaataattcttgatatctagcattttc 44094966  T
Q  147 c 147  Q
    |    
T  44094967 c 44094967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 47 - 148
Target Start/End: Complemental strand, 9910186 - 9910085
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    ||||||||||||||||| || |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  9910186 atgaaagattaataaataagtctgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctaacattttc 9910087  T
Q  147 ca 148  Q
    ||    
T  9910086 ca 9910085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 25463817 - 25463946
Alignment:
Q  18 gggtggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctta 117  Q
    ||||||||||||||||||||         ||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||| || |||||||    
T  25463817 gggtggtgggtgttatgtattttttttttatgaaagattaataaatgagacttaaatctaaaggtgattattgtgccatgtcattcttggatctttctta 25463916  T
Q  118 taaaatcattcttgatatctagcattttcc 147  Q
    ||||||||||||||||||||||||||||||    
T  25463917 taaaatcattcttgatatctagcattttcc 25463946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 3559787 - 3559887
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| || ||||||||| || ||||||||||||||||||||||||||||||||||||    
T  3559787 atgaaagattaataaatgagactgaaatataaaggtgattattgtgtcatatcattcttggatctttcttataaaatcattcttgatatctagcattttc 3559886  T
Q  147 c 147  Q
    |    
T  3559887 c 3559887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 18404618 - 18404718
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  18404618 atgaaagattaataaatgagactgaaatctaaatgtgattattgtgccatgtcattcttaaatctttcttataaaatcattcttgatatctagcattttc 18404717  T
Q  147 c 147  Q
    |    
T  18404718 c 18404718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 71 - 148
Target Start/End: Complemental strand, 19722970 - 19722893
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcca 148  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  19722970 aaatctaaaggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttcca 19722893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 57 - 149
Target Start/End: Complemental strand, 32000151 - 32000059
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttccat 149  Q
    |||||||||||||||||||||| |||||||||||||  ||||||||||||||| ||||||   ||||||||||||||||||||||||||||||    
T  32000151 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttccat 32000059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 57 - 147
Target Start/End: Complemental strand, 33786516 - 33786426
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 147  Q
    |||||||||||||||||||||| |||||||||||||  ||||||||||||||| ||||||   ||||||||||||||||||||||||||||    
T  33786516 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 33786426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 57 - 145
Target Start/End: Original strand, 40273888 - 40273976
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 145  Q
    |||||||||||||||||||||| |||||||||||||  ||||||||||||||| ||||||   ||||||||||||||||||||||||||    
T  40273888 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatatttcttgataaatcattcttgatatctagcatttt 40273976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 50 - 145
Target Start/End: Complemental strand, 44690914 - 44690818
Alignment:
Q  50 aaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 145  Q
    |||||||||||||| |||||| ||||||| |||||||||| ||  ||||||||||||||| |||||| ||||||||||| |||||||||| ||||||    
T  44690914 aaagattaataaataagactggaatctaagggtgattattctgccatgtcattcttgaatctttcttgataaaatcattattgatatctaacatttt 44690818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 10167569 - 10167670
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaat-ttttcttataaaatcattcttgatatctagcatttt 145  Q
    |||||| |||||||||| ||||||||||||||||||||||||||| | || | |||||| ||| |||| |||||||||||||||| |||| || ||||||    
T  10167569 atgaaaaattaataaataagactgaaatctaaaggtgattattgtatcatattattcttaaatatttttttataaaatcattcttaatatgtaacatttt 10167668  T
Q  146 cc 147  Q
    ||    
T  10167669 cc 10167670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 144
Target Start/End: Original strand, 33786623 - 33786696
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattt 144  Q
    |||| ||| |||||||||||||  ||||||||||||||| ||||||   |||||||||||||||||||||||||    
T  33786623 aaatttaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattt 33786696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 40273779 - 40273706
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  |||||||||||||||||||||| | |||||| ||||||||||||||||||    
T  40273779 aaatctaagggtgattattttgacatgtcattcttgaatttttcttgaaaaaatctttcttgatatctagcatt 40273706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 75 - 146
Target Start/End: Complemental strand, 52064445 - 52064373
Alignment:
Q  75 ctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttc 146  Q
    |||| ||||| |||| ||| ||||||||||||||| |||||| ||||||||||| ||||||||||||||||||    
T  52064445 ctaagggtgaatattctgtcatgtcattcttgaatctttcttgataaaatcatttttgatatctagcattttc 52064373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 16045786 - 16045859
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  |||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  16045786 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 16045859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 32000255 - 32000328
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||| ||||| ||| |||||||||||||||||||||| | |||||| |||||||||| |||||||    
T  32000255 aaatctaagggtggttattctgtcatgtcattcttgaatttttcttgagaaaatctttcttgatatatagcatt 32000328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 40215065 - 40214992
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  |||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  40215065 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 40214992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 109
Target Start/End: Original strand, 52329453 - 52329507
Alignment:
Q  55 ttaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaat 109  Q
    ||||||| | |||||||||||||| |||||||||| || ||||||||||||||||    
T  52329453 ttaataattaagactgaaatctaagggtgattattctgctatgtcattcttgaat 52329507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 18404519 - 18404446
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    ||||||||||||||||||| |   ||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  18404519 aaatctaaaggtgattattctaccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 18404446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 25463753 - 25463680
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  ||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  25463753 aaatctaagggtgattattctgccatgtcattcttaaaattttcttcataaaatctttcttgatatatagcatt 25463680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 44094775 - 44094702
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  |||||||||||||| ||||||| |||||||  |||||||||| |||||||    
T  44094775 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcatt 44094702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 6883564 - 6883491
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  |||||||||||||| ||||||| | |||||| ||||| |||| |||||||    
T  6883564 aaatctaagggtgattattctgccatgtcattcttgaaattttcttaaaaaaatctttcttaatatatagcatt 6883491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 9910281 - 9910354
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| | |||||||| ||  |||||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  9910281 aaatctaaggttgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 9910354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 19015481 - 19015408
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  || ||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  19015481 aaatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 19015408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 147
Target Start/End: Complemental strand, 27523143 - 27523050
Alignment:
Q  55 ttaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 147  Q
    ||||||||| ||||| ||||| || |||||||| | ||  ||   |||||||||| |||||| ||||||||||||||||||| || ||||||||    
T  27523143 ttaataaataagactaaaatcaaagggtgattaatctgccatacgattcttgaatctttcttgataaaatcattcttgatatataacattttcc 27523050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 36966696 - 36966769
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  || ||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  36966696 aaatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 36966769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 37821822 - 37821895
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  || ||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  37821822 aaatctaagggtgattattctgccatatcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 37821895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 100; Significance: 3e-49; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 33584253 - 33584122
Alignment:
Q  18 gggtggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctta 117  Q
    |||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  33584253 gggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctta 33584154  T
Q  118 taaaatcattcttgatatctagcattttccat 149  Q
    ||||||||||||||||||||||||||||||||    
T  33584153 taaaatcattcttgatatctagcattttccat 33584122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 4892343 - 4892472
Alignment:
Q  18 gggtggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctta 117  Q
    |||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  4892343 gggtggtgggtgttatgtatcttcttttaatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctta 4892442  T
Q  118 taaaatcattcttgatatctagcattttcc 147  Q
    ||||||||||||||||||||||||||||||    
T  4892443 taaaatcattcttgatatctagcattttcc 4892472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 25398379 - 25398508
Alignment:
Q  18 gggtggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctta 117  Q
    |||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||    
T  25398379 gggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattgttgaatttttctta 25398478  T
Q  118 taaaatcattcttgatatctagcattttcc 147  Q
    ||||||||||||||||||||||||||||||    
T  25398479 taaaatcattcttgatatctagcattttcc 25398508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 47 - 149
Target Start/End: Complemental strand, 6043407 - 6043305
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  6043407 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 6043308  T
Q  147 cat 149  Q
    |||    
T  6043307 cat 6043305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 47 - 148
Target Start/End: Original strand, 8145543 - 8145644
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  8145543 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 8145642  T
Q  147 ca 148  Q
    ||    
T  8145643 ca 8145644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 3521902 - 3521802
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  3521902 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 3521803  T
Q  147 c 147  Q
    |    
T  3521802 c 3521802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 47 - 146
Target Start/End: Original strand, 3362949 - 3363048
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  3362949 atgaaagattaataaatgagactgaaatctaaaggtggttattgtgtcatgtcattcttaaatttttcttataaaatcattcttgatatctagcattttc 3363048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 47 - 144
Target Start/End: Original strand, 12850972 - 12851069
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattt 144  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12850972 atgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattt 12851069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 37321717 - 37321588
Alignment:
Q  18 gggtggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctta 117  Q
    ||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||| |||||||    
T  37321717 gggtggtgggtgttatgtattttttatttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatttcattcttgaatatttctta 37321618  T
Q  118 taaaatcattcttgatatctagcattttcc 147  Q
    ||||||||||||||||||||||||||||||    
T  37321617 taaaatcattcttgatatctagcattttcc 37321588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 38899650 - 38899517
Alignment:
Q  18 gggtggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaat-ttttctt 116  Q
    |||||||||||||||| ||||        ||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||| |||| ||    
T  38899650 gggtggtgggtgttatatatcttttttttatgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaattttttttt 38899551  T
Q  117 ataaaatcattcttgatatctagcattttccatt 150  Q
    ||||||||||||||||||||||||||||||||||    
T  38899550 ataaaatcattcttgatatctagcattttccatt 38899517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 14138837 - 14138937
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  14138837 atgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 14138936  T
Q  147 c 147  Q
    |    
T  14138937 c 14138937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 18 - 148
Target Start/End: Original strand, 2477777 - 2477907
Alignment:
Q  18 gggtggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctta 117  Q
    ||||||||||||||||||||         ||||||||||||||||| ||||||||||||||||||||| ||||||  |||||||||||  || |||||||    
T  2477777 gggtggtgggtgttatgtattttttttttatgaaagattaataaataagactgaaatctaaaggtgatcattgtgccatgtcattcttagatctttctta 2477876  T
Q  118 taaaatcattcttgatatctagcattttcca 148  Q
    |||||||||||||||||||||||||||||||    
T  2477877 taaaatcattcttgatatctagcattttcca 2477907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 12614633 - 12614532
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaat-ttttcttataaaatcattcttgatatctagcatttt 145  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||| ||| |||| | |||||||||| ||||||||||||||||||    
T  12614633 atgaaaggttaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatcttttttgataaaatcatacttgatatctagcatttt 12614534  T
Q  146 cc 147  Q
    ||    
T  12614533 cc 12614532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 57 - 147
Target Start/End: Complemental strand, 22912942 - 22912852
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 147  Q
    |||||||||||||||||||||| |||||||||||||  ||||||||||||||| ||||||   ||||||||||||||||||||||||||||    
T  22912942 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 22912852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 11361055 - 11360947
Alignment:
Q  18 gggtggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctta 117  Q
    ||||||||||||||||||||         ||||||||||||||||| ||| |||||||||||| |||||||||||  ||||||||||||||| |||||||    
T  11361055 gggtggtgggtgttatgtattttttttgtatgaaagattaataaattagattgaaatctaaagatgattattgtgccatgtcattcttgaatctttctta 11360956  T
Q  118 taaaatcat 126  Q
    |||||||||    
T  11360955 taaaatcat 11360947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 57 - 147
Target Start/End: Complemental strand, 17545567 - 17545477
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 147  Q
    |||||||||||||||||||||| | |||||||||||| ||||||||||| ||| ||| ||   ||||||||||||||||||||||||||||    
T  17545567 aataaatgagactgaaatctaaggatgattattgtgtcatgtcattcttaaatattttttgataaatcattcttgatatctagcattttcc 17545477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 47 - 105
Target Start/End: Complemental strand, 4433903 - 4433845
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattctt 105  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||    
T  4433903 atgaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtcattctt 4433845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 71 - 130
Target Start/End: Original strand, 27482017 - 27482077
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaat-ttttcttataaaatcattctt 130  Q
    ||||||||||||||||||| ||||||||||||||||||| |||| | ||||||||||||||    
T  27482017 aaatctaaaggtgattattctgttatgtcattcttgaatcttttttgataaaatcattctt 27482077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 12614721 - 12614794
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||| ||||||||||||||| |||||| |||||||  |||||||||| |||||||    
T  12614721 aaatctaagggtgattattatgtcatgtcattcttgaatctttcttgataaaatatttcttgatatatagcatt 12614794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 22913042 - 22913115
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  |||||||||||||||||||||| | |||||| |||||||||| |||||||    
T  22913042 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgaaaaaatctttcttgatatatagcatt 22913115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 54 - 109
Target Start/End: Original strand, 13664736 - 13664791
Alignment:
Q  54 attaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaat 109  Q
    |||||||||| |||||||||||||| |||||||||| | | |||||||||||||||    
T  13664736 attaataaataagactgaaatctaagggtgattattctatcatgtcattcttgaat 13664791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 2477713 - 2477640
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  ||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  2477713 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 2477640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 6043499 - 6043572
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| |   |||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  6043499 aaatctaagggtgattattcttccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 6043572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 8145452 - 8145387
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| ||  |||||||||||||| ||||||| |||||||| ||||||||||    
T  8145452 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 8145387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 11361119 - 11361192
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  ||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  11361119 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 11361192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 135
Target Start/End: Complemental strand, 10458469 - 10458409
Alignment:
Q  76 taaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatat 135  Q
    |||||||||||||| ||  |||||||||||||||||||||| |||||||  ||||||||||    
T  10458469 taaaggtgattattttgccatgtcattcttgaatttttcttgataaaatttttcttgatat 10458409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 3362855 - 3362782
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||| ||||| ||  |||||||||||| | ||||||| |||||||| |||||||||| |||||||    
T  3362855 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 3362782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 4433995 - 4434068
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  || ||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  4433995 aaatctaagggtgattattctgccatatcattcttgaaattttcttaaaaaaatctttcttgatatatagcatt 4434068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 4892279 - 4892206
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  ||||||||||| || ||||||| | |||||| |||||||||| |||||||    
T  4892279 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 4892206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 116
Target Start/End: Original strand, 17545673 - 17545718
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt 116  Q
    |||||||| |||||||||| ||  ||||||||||||||||||||||    
T  17545673 aaatctaatggtgattattctgccatgtcattcttgaatttttctt 17545718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 25398315 - 25398242
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  ||||||||||| || ||||||| | |||||| |||||||||| |||||||    
T  25398315 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 25398242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 38899714 - 38899787
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||| ||||| ||  |||||||||||| | ||||||| |||||||| |||||||||| |||||||    
T  38899714 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 38899787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 117 - 145
Target Start/End: Original strand, 12614483 - 12614511
Alignment:
Q  117 ataaaatcattcttgatatctagcatttt 145  Q
    |||||||||||||||||||||||||||||    
T  12614483 ataaaatcattcttgatatctagcatttt 12614511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 100; Significance: 3e-49; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 47 - 150
Target Start/End: Original strand, 10662058 - 10662161
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10662058 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 10662157  T
Q  147 catt 150  Q
    ||||    
T  10662158 catt 10662161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 18 - 149
Target Start/End: Original strand, 33380348 - 33380479
Alignment:
Q  18 gggtggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctta 117  Q
    |||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  33380348 gggtggtgggtgttatgtatctttttttaatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctta 33380447  T
Q  118 taaaatcattcttgatatctagcattttccat 149  Q
    ||||||||||||||||||||||||||||||||    
T  33380448 taaaatcattcttgatatctagcattttccat 33380479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 7475432 - 7475300
Alignment:
Q  18 gggtggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctta 117  Q
    |||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||    
T  7475432 gggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattatgtcatatcattcttgaatttttctta 7475333  T
Q  118 taaaatcattcttgatatctagcattttccatt 150  Q
    |||||||||||||||||||||||||||||||||    
T  7475332 taaaatcattcttgatatctagcattttccatt 7475300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 23267986 - 23267857
Alignment:
Q  18 gggtggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctta 117  Q
    |||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||    
T  23267986 gggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttctta 23267887  T
Q  118 taaaatcattcttgatatctagcattttcc 147  Q
    ||||||||||||||||||||||||||||||    
T  23267886 taaaatcattcttgatatctagcattttcc 23267857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 47 - 148
Target Start/End: Original strand, 35160929 - 35161030
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35160929 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 35161028  T
Q  147 ca 148  Q
    ||    
T  35161029 ca 35161030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 47 - 150
Target Start/End: Complemental strand, 9293470 - 9293367
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  9293470 atgaaagattaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 9293371  T
Q  147 catt 150  Q
    ||||    
T  9293370 catt 9293367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 18 - 143
Target Start/End: Original strand, 3989217 - 3989342
Alignment:
Q  18 gggtggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctta 117  Q
    ||||||||||||||||||||         |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| || |||||||    
T  3989217 gggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggttattattgtgtcatgtcattcttggatctttctta 3989316  T
Q  118 taaaatcattcttgatatctagcatt 143  Q
    ||||||||||||||||||||||||||    
T  3989317 taaaatcattcttgatatctagcatt 3989342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 13355018 - 13355118
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  13355018 atgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 13355117  T
Q  147 c 147  Q
    |    
T  13355118 c 13355118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 31174730 - 31174633
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattt 144  Q
    ||||||||||||||||||||| ||||||||||||| | ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  31174730 atgaaagattaataaatgagattgaaatctaaaggagtttattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattt 31174633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 22592880 - 22592983
Alignment:
Q  47 atgaaagattaataaatgagactgaaa--tctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    ||||||| ||||||||| |||||||||  ||||| |||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  22592880 atgaaaggttaataaataagactgaaaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcatt 22592979  T
Q  144 ttcc 147  Q
    ||||    
T  22592980 ttcc 22592983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 57 - 147
Target Start/End: Original strand, 43331092 - 43331182
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 147  Q
    |||||||||||||||||||||||||||||||||||   ||||||||||||||| ||||||   ||||||||||||||||||||||||||||    
T  43331092 aataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 43331182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 57 - 149
Target Start/End: Original strand, 9723586 - 9723679
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttccat 149  Q
    ||||||| ||||||||||||||||||||||||| ||| ||||||||||| ||| |||||| || ||||||||||||||||||| ||||||||||    
T  9723586 aataaataagactgaaatctaaaggtgattattctgtcatgtcattcttaaatatttcttgatcaaatcattcttgatatctaacattttccat 9723679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 57 - 145
Target Start/End: Complemental strand, 21393570 - 21393483
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 145  Q
    |||||||||||||||||| ||| |||||||||||||| |||||||||||||| |||||||   ||||||||||||||||||||||||||    
T  21393570 aataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaa-ttttcttgataaatcattcttgatatctagcatttt 21393483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 16767357 - 16767288
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctt 116  Q
    ||||||| ||||||||||||||||||||||||  ||||||||||||| ||||||||||||||| ||||||    
T  16767357 atgaaaggttaataaatgagactgaaatctaagagtgattattgtgtcatgtcattcttgaatctttctt 16767288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 18 - 106
Target Start/End: Original strand, 21936223 - 21936311
Alignment:
Q  18 gggtggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttg 106  Q
    ||||||||||||||||||||         ||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||    
T  21936223 gggtggtgggtgttatgtattttttttttatgaaagattaataaatgaaactgaaatctaaaggtgattattgtgccatgtcattcttg 21936311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 102 - 149
Target Start/End: Original strand, 39819272 - 39819319
Alignment:
Q  102 tcttgaatttttcttataaaatcattcttgatatctagcattttccat 149  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  39819272 tcttgaatttttcttataaaatcattcttgatatctaacattttccat 39819319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 57 - 147
Target Start/End: Complemental strand, 34321042 - 34320963
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 147  Q
    |||||||||||||||||||||| |||||||||||||  |||||||||||||           |||||||||||||||||||||||||||||    
T  34321042 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttga-----------aaaatcattcttgatatctagcattttcc 34320963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 37335824 - 37335894
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcat 126  Q
    |||||||||||||||||||||| |||||||| ||||| |||||||| || ||| |||||| ||||||||||    
T  37335824 aataaatgagactgaaatctaagggtgattactgtgtcatgtcattattaaatctttcttgataaaatcat 37335894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 14941354 - 14941427
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  ||||||||||||||| |||||| |||||||| |||||||||| |||||||    
T  14941354 aaatctaagggtgattattctgccatgtcattcttgaatctttcttaataaaatctttcttgatatatagcatt 14941427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 14941259 - 14941199
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttga 107  Q
    ||||||| ||||||||| ||| |||||||||| | |||||||||||| |||||||||||||    
T  14941259 atgaaaggttaataaataagattgaaatctaaggatgattattgtgtcatgtcattcttga 14941199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 7475496 - 7475569
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| | | |||||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  7475496 aaatctaagggtgattattctatcatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 7475569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 9293564 - 9293637
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  ||||||||||||||  |||||| |||||||| |||||||||| |||||||    
T  9293564 aaatctaagggtgattattctgccatgtcattcttgaaaatttcttgataaaatctttcttgatatatagcatt 9293637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 10661964 - 10661891
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  ||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  10661964 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 10661891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 21936158 - 21936085
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  || ||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  21936158 aaatctaagggtgattattctgccatatcattcttgaaattttcttgataaaatctttcttgatatatagcatt 21936085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 23268050 - 23268123
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  |||||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  23268050 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 23268123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 27847709 - 27847644
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| ||| ||||||||||||||| |||||| |||||||| ||||| ||||    
T  27847709 aaatctaacggtgattattctgtcatgtcattcttgaatctttcttaataaaatctttctttatat 27847644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 31174822 - 31174887
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| ||  |||||||||||||| ||||||| |||||||| ||||||||||    
T  31174822 aaatctaagggtgattattctgccatgtcattcttgaaattttcttaataaaatctttcttgatat 31174887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 35160834 - 35160761
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  ||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  35160834 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 35160761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 43330989 - 43330916
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  ||||||||||||||||||| || | |||||| |||||||||| |||||||    
T  43330989 aaatctaagggtgattattctgccatgtcattcttgaattttttttgagaaaatctttcttgatatatagcatt 43330916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 9723482 - 9723409
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||| ||| |||||||||| ||| ||||||||||| ||| |||||| |||||||| ||||| |||| |||||||    
T  9723482 aaatttaagggtgattattctgtcatgtcattcttaaatctttcttaataaaatctttcttaatatatagcatt 9723409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 150
Target Start/End: Original strand, 21936313 - 21936341
Alignment:
Q  122 atcattcttgatatctagcattttccatt 150  Q
    |||||||||||||||||||||||||||||    
T  21936313 atcattcttgatatctagcattttccatt 21936341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 98; Significance: 4e-48; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 46441985 - 46442114
Alignment:
Q  18 gggtggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctta 117  Q
    |||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  46441985 gggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctta 46442084  T
Q  118 taaaatcattcttgatatctagcattttcc 147  Q
    ||||||||||||||||||||||||||||||    
T  46442085 taaaatcattcttgatatctagcattttcc 46442114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 47 - 150
Target Start/End: Original strand, 36073519 - 36073622
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36073519 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 36073618  T
Q  147 catt 150  Q
    ||||    
T  36073619 catt 36073622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 53123172 - 53123301
Alignment:
Q  18 gggtggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctta 117  Q
    |||||||||||||||||||||        |||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||    
T  53123172 gggtggtgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaatttttctta 53123271  T
Q  118 taaaatcattcttgatatctagcattttcc 147  Q
    ||||||||||||||||||||||||||||||    
T  53123272 taaaatcattcttgatatctagcattttcc 53123301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 21 - 149
Target Start/End: Original strand, 44893570 - 44893698
Alignment:
Q  21 tggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataa 120  Q
    ||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||    
T  44893570 tggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataa 44893669  T
Q  121 aatcattcttgatatctagcattttccat 149  Q
    |||||||||||||||||||||||||||||    
T  44893670 aatcattcttgatatctagcattttccat 44893698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 18 - 145
Target Start/End: Original strand, 9089011 - 9089138
Alignment:
Q  18 gggtggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctta 117  Q
    |||||||||||||||||||||        |||||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||    
T  9089011 gggtggtgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaatttttctta 9089110  T
Q  118 taaaatcattcttgatatctagcatttt 145  Q
    ||||||||||||||||||||||||||||    
T  9089111 taaaatcattcttgatatctagcatttt 9089138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 21 - 147
Target Start/End: Complemental strand, 44893134 - 44893008
Alignment:
Q  21 tggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataa 120  Q
    ||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||    
T  44893134 tggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataa 44893035  T
Q  121 aatcattcttgatatctagcattttcc 147  Q
    |||||||||||||||||||||||||||    
T  44893034 aatcattcttgatatctagcattttcc 44893008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 47290207 - 47290336
Alignment:
Q  18 gggtggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctta 117  Q
    |||||||||||||||||||||        |||||||| ||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||    
T  47290207 gggtggtgggtgttatgtatcttttttttatgaaagaataataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatttttctta 47290306  T
Q  118 taaaatcattcttgatatctagcattttcc 147  Q
    ||||||||||||||||||||||||||||||    
T  47290307 taaaatcattcttgatatctagcattttcc 47290336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 21802215 - 21802115
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  21802215 atgaaagattaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 21802116  T
Q  147 c 147  Q
    |    
T  21802115 c 21802115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 18 - 145
Target Start/End: Original strand, 24128380 - 24128507
Alignment:
Q  18 gggtggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctta 117  Q
    ||||||||| |||||||||||        |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  24128380 gggtggtggatgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttaaatttttctta 24128479  T
Q  118 taaaatcattcttgatatctagcatttt 145  Q
    ||||||||||||||||||||||||||||    
T  24128480 taaaatcattcttgatatctagcatttt 24128507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 50156502 - 50156374
Alignment:
Q  18 gggtggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctta 117  Q
    |||||||||||||||||||||        |||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||    
T  50156502 gggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaa-ggtgattattatgtcatgtcattcttgaatttttctta 50156404  T
Q  118 taaaatcattcttgatatctagcattttcc 147  Q
    ||||||||||||||||||||| ||||||||    
T  50156403 taaaatcattcttgatatctaacattttcc 50156374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 2625007 - 2625107
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||| |||||||    
T  2625007 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcatttttgaatctttcttataaaatcattcttgatatctaacattttc 2625106  T
Q  147 c 147  Q
    |    
T  2625107 c 2625107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 22199429 - 22199529
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  22199429 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 22199528  T
Q  147 c 147  Q
    |    
T  22199529 c 22199529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 36073121 - 36073221
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  36073121 atgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttgaatttttcttataaaatcatttttgatatctagcattttc 36073220  T
Q  147 c 147  Q
    |    
T  36073221 c 36073221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 49387782 - 49387682
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||| |||||||    
T  49387782 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcatccttgatatctaacattttc 49387683  T
Q  147 c 147  Q
    |    
T  49387682 c 49387682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 31078743 - 31078614
Alignment:
Q  18 gggtggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctta 117  Q
    ||||| |||||||||||||||        ||||||||||||||||||||| |||||||||||| |||||||||||  ||||||||||||||||||| |||    
T  31078743 gggtgatgggtgttatgtatcttttttttatgaaagattaataaatgagattgaaatctaaagatgattattgtgccatgtcattcttgaatttttttta 31078644  T
Q  118 taaaatcattcttgatatctagcattttcc 147  Q
    ||||||||||||||||||||||||||||||    
T  31078643 taaaatcattcttgatatctagcattttcc 31078614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 4751617 - 4751717
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  4751617 atgaaagattaataaatgagactgaaatctaaaggtggttattgtgccatgtcattcttaaatttttcttataaaattattcttgatatctagcattttc 4751716  T
Q  147 c 147  Q
    |    
T  4751717 c 4751717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 48 - 147
Target Start/End: Complemental strand, 10442682 - 10442582
Alignment:
Q  48 tgaaagattaa-taaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10442682 tgaaagattaaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 10442583  T
Q  147 c 147  Q
    |    
T  10442582 c 10442582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 7745036 - 7744907
Alignment:
Q  18 gggtggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctta 117  Q
    ||||||||||||||||||||         |||||| |||||||||||||| ||||||||||||||||||||||||  ||||||||||||||| |||||||    
T  7745036 gggtggtgggtgttatgtattttttttttatgaaatattaataaatgagattgaaatctaaaggtgattattgtgcaatgtcattcttgaatctttctta 7744937  T
Q  118 taaaatcattcttgatatctagcattttcc 147  Q
    ||||||||||||||||||||| ||||||||    
T  7744936 taaaatcattcttgatatctaacattttcc 7744907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 33530579 - 33530479
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||| || ||| ||||||||||||||||||||||||||||||||    
T  33530579 atgaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtcattcttggatcttttttataaaatcattcttgatatctagcattttc 33530480  T
Q  147 c 147  Q
    |    
T  33530479 c 33530479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 47 - 145
Target Start/End: Original strand, 17655600 - 17655699
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 145  Q
    ||||||| |||||||||||||||||||||||||||| |||||| ||| ||||||||||| ||| |||||| |||||||||||||| ||||||||||||||    
T  17655600 atgaaaggttaataaatgagactgaaatctaaaggtaattattatgtcatgtcattcttaaatctttcttgataaaatcattcttaatatctagcatttt 17655699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 47 - 137
Target Start/End: Complemental strand, 23964359 - 23964269
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatct 137  Q
    ||||||||||||||||||||| |||||||||||| |||||||| ||  ||||||||||| ||| |||||||||||||||||||||||||||    
T  23964359 atgaaagattaataaatgagattgaaatctaaagatgattattatgccatgtcattcttaaatctttcttataaaatcattcttgatatct 23964269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 50 - 147
Target Start/End: Complemental strand, 11314144 - 11314046
Alignment:
Q  50 aaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 147  Q
    |||| ||||||||| |||||  ||||||| |||||||||||||| |||||||||||| || |||||| |||||||||||||||||||||||||||||||    
T  11314144 aaaggttaataaataagactataatctaagggtgattattgtgtcatgtcattcttgcatctttcttgataaaatcattcttgatatctagcattttcc 11314046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 57 - 145
Target Start/End: Original strand, 24392854 - 24392942
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 145  Q
    |||||||||||||||||||||| | ||||||||||| |||||||||||| ||| ||||||   ||||||||||||||||||||||||||    
T  24392854 aataaatgagactgaaatctaaggatgattattgtgctatgtcattcttaaatatttcttgataaatcattcttgatatctagcatttt 24392942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 49 - 147
Target Start/End: Original strand, 42671840 - 42671939
Alignment:
Q  49 gaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 147  Q
    ||||| |||| |||||||||| ||||||||   |||||||| ||| ||||||||||||||| |||||| |||||||||||||||||||||| ||||||||    
T  42671840 gaaaggttaacaaatgagactcaaatctaagaatgattattatgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctaacattttcc 42671939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 37219801 - 37219902
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 145  Q
    ||||||| ||||||||| ||| |||||||||| | |||||||| ||  ||||||||||| ||| |||||| |||||||||||||||||||||| ||||||    
T  37219801 atgaaaggttaataaataagattgaaatctaaggatgattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctaacatttt 37219900  T
Q  146 cc 147  Q
    ||    
T  37219901 cc 37219902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 37934837 - 37934736
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 145  Q
    ||||||| ||||||||||||| |||||||||| |||||||||||||| || ||||| |||||| |||||| ||||||||| || | ||||||| ||||||    
T  37934837 atgaaaggttaataaatgagattgaaatctaagggtgattattgtgtcatatcattattgaatctttcttaataaaatcagtcataatatctaacatttt 37934738  T
Q  146 cc 147  Q
    ||    
T  37934737 cc 37934736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 116
Target Start/End: Original strand, 30563350 - 30563448
Alignment:
Q  18 gggtggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctt 116  Q
    ||||||||||||||||||||         ||||||| ||||||||| ||||||||||||||  ||||||||||||| ||||||||||||||| ||||||    
T  30563350 gggtggtgggtgttatgtattttttttttatgaaaggttaataaataagactgaaatctaagtgtgattattgtgtcatgtcattcttgaatctttctt 30563448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 95 - 149
Target Start/End: Complemental strand, 25063422 - 25063367
Alignment:
Q  95 atgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttccat 149  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  25063422 atgtcattcttgaatctttcttgataaaatcattcttgatatctagcattttccat 25063367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 33530676 - 33530749
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  |||||||||||||||||||||| |||||||| |||||||||| |||||||    
T  33530676 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgataaaatctttcttgatatatagcatt 33530749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 10442777 - 10442850
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  |||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  10442777 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 10442850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 31078807 - 31078880
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  |||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  31078807 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 31078880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 55 - 146
Target Start/End: Original strand, 44744610 - 44744698
Alignment:
Q  55 ttaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    ||||||||| |||||||||||||| | | ||||||| || ||||||||||||||| |   | ||||||||||| |||||||||| |||||||    
T  44744610 ttaataaataagactgaaatctaaggataattattgagtcatgtcattcttgaatct---tgataaaatcatttttgatatctaacattttc 44744698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 49387876 - 49387949
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  |||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  49387876 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 49387949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 150
Target Start/End: Complemental strand, 36073349 - 36073253
Alignment:
Q  55 ttaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttccatt 150  Q
    ||||||||| ||||||||||||||  || |||||| ||  || |||||||| ||| |||||| ||||||||||| ||  ||||||||||||||||||    
T  36073349 ttaataaataagactgaaatctaagagtaattattctggcatatcattcttaaatctttcttgataaaatcatttttagtatctagcattttccatt 36073253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 2624914 - 2624841
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  || ||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  2624914 aaatctaagggtgattattctgccatttcattcttgaaattttcttgataaaatctttcttgatatatagcatt 2624841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 7745100 - 7745173
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  ||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  7745100 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 7745173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 21802310 - 21802383
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  |||||||||||||| ||||||| |||||||  |||||||||| |||||||    
T  21802310 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatatttcttgatatatagcatt 21802383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 22199338 - 22199265
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| | |||||||| ||  |||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  22199338 aaatctaaggctgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 22199265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 24392744 - 24392671
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||| ||| |||||||||| ||  |||||||||||||||||||||| | |||||| |||||||||| |||||||    
T  24392744 aaatttaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatatatagcatt 24392671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 36073024 - 36072951
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||| ||||| ||  |||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  36073024 aaatctaagggtggttattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 36072951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 46441921 - 46441848
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  |||||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  46441921 aaatctaagggtgattattttgccatgtcattcttgaaattttcttaaaaaaatctttcttgatatatagcatt 46441848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 47290143 - 47290070
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  |||||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  47290143 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 47290070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 134
Target Start/End: Original strand, 36073731 - 36073795
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgata 134  Q
    ||||||||| ||||||||| ||| ||||||||||| ||| |||||| |||||||| |||||||||    
T  36073731 aaatctaaaagtgattattttgtcatgtcattcttaaatctttcttcataaaatctttcttgata 36073795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 53123108 - 53123034
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt--ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  |||||||||||||| |||||||  | |||||| |||||||||| |||||||    
T  53123108 aaatctaagggtgattattctgccatgtcattcttgaaattttctttgaaaaaatctttcttgatatatagcatt 53123034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 4751523 - 4751450
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||| ||||| ||  |||||||||||| | ||||||| |||||||| |||||||||| |||||||    
T  4751523 aaatctaagggtggttattctgccatgtcattcttggaattttcttgataaaatctttcttgatatatagcatt 4751450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 24128316 - 24128243
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| | |||||||| ||  |||||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  24128316 aaatctaaggatgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 24128243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 36073427 - 36073354
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||| ||| |||||||||| ||  |||||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  36073427 aaatttaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 36073354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 44893503 - 44893430
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttg-aatttttcttataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  |||||||||||| ||||||| | | |||||| |||||||||| |||||||    
T  44893503 aaatctaagggtgattattctgccatgtcattcttgaaatttttttgaaaaaatctttcttgatatatagcatt 44893430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 95; Significance: 2e-46; HSPs: 6)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 21 - 147
Target Start/End: Original strand, 26080 - 26206
Alignment:
Q  21 tggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataa 120  Q
    ||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  26080 tggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataa 26179  T
Q  121 aatcattcttgatatctagcattttcc 147  Q
    |||||||||||||||||||||||||||    
T  26180 aatcattcttgatatctagcattttcc 26206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 21 - 147
Target Start/End: Original strand, 16128 - 16254
Alignment:
Q  21 tggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataa 120  Q
    ||||||||||||||||||        |||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||    
T  16128 tggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaagatgattattgtgccatgtcattcttgaatttttcttataa 16227  T
Q  121 aatcattcttgatatctagcattttcc 147  Q
    |||||||||||||||||||||||||||    
T  16228 aatcattcttgatatctagcattttcc 16254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 80
Target Start/End: Original strand, 8546 - 8605
Alignment:
Q  21 tggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaag 80  Q
    ||||||||||||||||||        ||||||||||||||||||||||||||||||||||    
T  8546 tggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaag 8605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 8479 - 8414
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| ||  |||||||||||||| ||||||| |||||||| ||||||||||    
T  8479 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 8414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 16061 - 15996
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| ||  |||||||||||||| ||||||| |||||||| ||||||||||    
T  16061 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 15996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 26013 - 25948
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| ||  |||||||||||||| ||||||| |||||||| ||||||||||    
T  26013 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatat 25948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 94; Significance: 1e-45; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 32702346 - 32702475
Alignment:
Q  18 gggtggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctta 117  Q
    ||||||||||| |||||||||        |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||    
T  32702346 gggtggtgggtcttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttgaatttttctta 32702445  T
Q  118 taaaatcattcttgatatctagcattttcc 147  Q
    ||||||||||||||||||||||||||||||    
T  32702446 taaaatcattcttgatatctagcattttcc 32702475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 47 - 148
Target Start/End: Complemental strand, 18365469 - 18365368
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  18365469 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 18365370  T
Q  147 ca 148  Q
    ||    
T  18365369 ca 18365368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 47 - 148
Target Start/End: Complemental strand, 18370733 - 18370632
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  18370733 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgctatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 18370634  T
Q  147 ca 148  Q
    ||    
T  18370633 ca 18370632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 17175945 - 17175816
Alignment:
Q  18 gggtggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctta 117  Q
    ||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||| |||||||    
T  17175945 gggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttctta 17175846  T
Q  118 taaaatcattcttgatatctagcattttcc 147  Q
    ||||||||||||||||||||||||||||||    
T  17175845 taaaatcattcttgatatctagcattttcc 17175816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 28675318 - 28675418
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  28675318 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 28675417  T
Q  147 c 147  Q
    |    
T  28675418 c 28675418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 33696867 - 33696967
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  33696867 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatctttcttataaaatcattcttgatatctagcattttc 33696966  T
Q  147 c 147  Q
    |    
T  33696967 c 33696967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 47 - 149
Target Start/End: Complemental strand, 33695221 - 33695119
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  || |||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  33695221 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgacatatcattcttaaatatttcttataaaatcattcttgatatctagcattttc 33695122  T
Q  147 cat 149  Q
    |||    
T  33695121 cat 33695119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 17705363 - 17705264
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  17705363 atgaaaggttaataaatgagactgaaatctaa-ggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 17705265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 23290976 - 23290876
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    |||||||||||||||||||||||||||||||||||| |||||||||  || |||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  23290976 atgaaagattaataaatgagactgaaatctaaaggtaattattgtgccatatcattcttgaatctttcttataaaatcatttttgatatctagcattttc 23290877  T
Q  147 c 147  Q
    |    
T  23290876 c 23290876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 47 - 149
Target Start/End: Complemental strand, 2309318 - 2309216
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||  ||||||||||||||| ||||||||||||||||  ||||||||||||||||||    
T  2309318 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatctttcttataaaatcatcgttgatatctagcattttc 2309219  T
Q  147 cat 149  Q
    |||    
T  2309218 cat 2309216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 50 - 145
Target Start/End: Complemental strand, 6031632 - 6031537
Alignment:
Q  50 aaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 145  Q
    |||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||| ||| |||||||||||||||||||||| || |||||    
T  6031632 aaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatcttttttataaaatcattcttgatatccagtatttt 6031537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 57 - 145
Target Start/End: Complemental strand, 11548474 - 11548386
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 145  Q
    |||||||||||||||||||||| |||||||||||||  |||||||||||||||  |||||   ||||||||||||||||||||||||||    
T  11548474 aataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatcgttcttgataaatcattcttgatatctagcatttt 11548386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 47 - 109
Target Start/End: Complemental strand, 18889539 - 18889477
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaat 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  18889539 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaat 18889477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 29693615 - 29693716
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 145  Q
    |||||||  |||||||| |||||||||||||| ||| |||||| ||  ||||||||||| ||| |||||| |||||||||||||||||||||||||||||    
T  29693615 atgaaaggataataaataagactgaaatctaagggtcattattctgccatgtcattcttaaatctttcttgataaaatcattcttgatatctagcatttt 29693714  T
Q  146 cc 147  Q
    ||    
T  29693715 cc 29693716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 47 - 106
Target Start/End: Original strand, 6127447 - 6127506
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttg 106  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||    
T  6127447 atgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttg 6127506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 81 - 146
Target Start/End: Complemental strand, 34238948 - 34238883
Alignment:
Q  81 gtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    ||||||||||||| ||||||||||||||| ||  | ||||||||||||||||||||||||||||||    
T  34238948 gtgattattgtgtcatgtcattcttgaatcttcttgataaaatcattcttgatatctagcattttc 34238883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 69 - 149
Target Start/End: Complemental strand, 582602 - 582520
Alignment:
Q  69 tgaaatctaaaggtgattattgtgtt-atgtcattcttgaatttttctta-taaaatcattcttgatatctagcattttccat 149  Q
    |||||||||| |||||||||| ||   || |||||||| ||||||||||| ||||||||||||||||||||| ||||||||||    
T  582602 tgaaatctaatggtgattattctgcccatatcattcttaaatttttcttaataaaatcattcttgatatctaacattttccat 582520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 17176009 - 17176082
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||| |||||||||||||| |||| || |||||||| |||||||||| |||||||    
T  17176009 aaatctaagggtgattattctgtcatgtcattcttgaaattttattgataaaatctttcttgatatatagcatt 17176082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 17705453 - 17705526
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||| ||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  17705453 aaatctaagggtgattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 17705526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 33695315 - 33695388
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  |||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  33695315 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 33695388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 33696773 - 33696700
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  |||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  33696773 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 33696700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 95 - 149
Target Start/End: Complemental strand, 2121057 - 2121002
Alignment:
Q  95 atgtcattcttgaat-ttttcttataaaatcattcttgatatctagcattttccat 149  Q
    ||||||||||||||| |||| ||||||||||||| |||||||||| ||||||||||    
T  2121057 atgtcattcttgaatctttttttataaaatcatttttgatatctaacattttccat 2121002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 6127352 - 6127279
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  ||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  6127352 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 6127279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 23291072 - 23291145
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  ||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  23291072 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 23291145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 28675225 - 28675152
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| ||||||||||  |  |||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  28675225 aaatctaagggtgattattccgacatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 28675152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 71 - 141
Target Start/End: Original strand, 11548576 - 11548647
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagca 141  Q
    |||||||| |||||||||| ||  |||||||||||||||||||||| | |||||  |||||||||| |||||    
T  11548576 aaatctaagggtgattattctgccatgtcattcttgaatttttcttgagaaaatttttcttgatatatagca 11548647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 81 - 143
Target Start/End: Complemental strand, 25986997 - 25986934
Alignment:
Q  81 gtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    ||||||||| ||  |||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  25986997 gtgattattttgccatgtcattcttgaaattttcttaataaaatctttcttgatatatagcatt 25986934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 18365561 - 18365634
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttg-aatttttcttataaaatcattcttgatatctagcatt 143  Q
    |||| ||| |||||||||| ||  |||||||||||| ||||||| | |||||||| |||||||||| |||||||    
T  18365561 aaatttaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcatt 18365634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 18370825 - 18370898
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttg-aatttttcttataaaatcattcttgatatctagcatt 143  Q
    |||| ||| |||||||||| ||  |||||||||||| ||||||| | |||||||| |||||||||| |||||||    
T  18370825 aaatttaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcatt 18370898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 79
Target Start/End: Complemental strand, 9752141 - 9752109
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaa 79  Q
    ||||||| |||||||||||||||||||||||||    
T  9752141 atgaaaggttaataaatgagactgaaatctaaa 9752109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 18889685 - 18889757
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcatt 143  Q
    |||||||| ||| |||||| ||  |||||||||||||| |||||||   ||||| |||||||||| |||||||    
T  18889685 aaatctaagggttattattctgccatgtcattcttgaaattttcttgataaatctttcttgatatatagcatt 18889757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 94; Significance: 1e-45; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 3137338 - 3137209
Alignment:
Q  18 gggtggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctta 117  Q
    ||||| |||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  3137338 gggtgatgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttctta 3137239  T
Q  118 taaaatcattcttgatatctagcattttcc 147  Q
    ||||||||||||||||||||||||||||||    
T  3137238 taaaatcattcttgatatctagcattttcc 3137209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 34482783 - 34482683
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34482783 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 34482684  T
Q  147 c 147  Q
    |    
T  34482683 c 34482683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 47 - 149
Target Start/End: Complemental strand, 19650795 - 19650693
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  19650795 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 19650696  T
Q  147 cat 149  Q
    |||    
T  19650695 cat 19650693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 18 - 148
Target Start/End: Original strand, 37522194 - 37522324
Alignment:
Q  18 gggtggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctta 117  Q
    |||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||| |||||||||||    
T  37522194 gggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattatgccatgtcattcttaaatttttctta 37522293  T
Q  118 taaaatcattcttgatatctagcattttcca 148  Q
    |||||||||||||||||||||||||||||||    
T  37522294 taaaatcattcttgatatctagcattttcca 37522324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 18 - 152
Target Start/End: Complemental strand, 3574450 - 3574316
Alignment:
Q  18 gggtggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctta 117  Q
    ||||||||||||||||||||         ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||| || |||||||    
T  3574450 gggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctagaggtgattattgtgtcatgtcattcttggatctttctta 3574351  T
Q  118 taaaatcattcttgatatctagcattttccattga 152  Q
    |||||||||||||||||||||||||||||| ||||    
T  3574350 taaaatcattcttgatatctagcattttcccttga 3574316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 47 - 149
Target Start/End: Original strand, 30385570 - 30385672
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  30385570 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatttagcattttc 30385669  T
Q  147 cat 149  Q
    |||    
T  30385670 cat 30385672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 17 - 147
Target Start/End: Complemental strand, 37216978 - 37216848
Alignment:
Q  17 agggtggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctt 116  Q
    |||||||||||||||||||||         |||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||| ||||||    
T  37216978 agggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatgtcattcttgaatctttctt 37216879  T
Q  117 ataaaatcattcttgatatctagcattttcc 147  Q
    |||||||||||||||||||||||||||||||    
T  37216878 ataaaatcattcttgatatctagcattttcc 37216848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 3456205 - 3456334
Alignment:
Q  18 gggtggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctta 117  Q
    ||||||||||||||||||||         |||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||| |||||||    
T  3456205 gggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaagatgattagtgtgtcatgtcattcttgaatctttctta 3456304  T
Q  118 taaaatcattcttgatatctagcattttcc 147  Q
    ||||||||||||||||||||||||||||||    
T  3456305 taaaatcattcttgatatctagcattttcc 3456334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 47 - 147
Target Start/End: Complemental strand, 22426240 - 22426140
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  22426240 atgaaagattaataaatgagactgaaatctaaatgtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 22426141  T
Q  147 c 147  Q
    |    
T  22426140 c 22426140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 33113964 - 33114064
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  33113964 atgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 33114063  T
Q  147 c 147  Q
    |    
T  33114064 c 33114064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 47 - 146
Target Start/End: Complemental strand, 8320477 - 8320378
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  8320477 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattattgatatctagcattttc 8320378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 47 - 148
Target Start/End: Original strand, 3089589 - 3089690
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||  || ||||||||||||||||||||||||||||||||||||    
T  3089589 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttagatctttcttataaaatcattcttgatatctagcattttc 3089688  T
Q  147 ca 148  Q
    ||    
T  3089689 ca 3089690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 6042047 - 6042147
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    |||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  6042047 atgaaaaattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatctttcttataaaatcattcttgatatctagcattttc 6042146  T
Q  147 c 147  Q
    |    
T  6042147 c 6042147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 48161076 - 48161176
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||| || ||||||||||||||||||||||||||||||||||||    
T  48161076 atgaaaaattaataaatgagactgaaatctaaaggtgattattgtgtcatgtcgttcttggatatttcttataaaatcattcttgatatctagcattttc 48161175  T
Q  147 c 147  Q
    |    
T  48161176 c 48161176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 47 - 149
Target Start/End: Original strand, 2754889 - 2754991
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    |||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||| ||| ||||||||||||| ||||||||||||||||||||||    
T  2754889 atgaaagattaataaatgagactgaaatttaaaggtgattattgtgccatgtcattcttaaatctttcttataaaatgattcttgatatctagcattttc 2754988  T
Q  147 cat 149  Q
    |||    
T  2754989 cat 2754991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 47 - 145
Target Start/End: Original strand, 33145882 - 33145980
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 145  Q
    ||||||| ||||||||| |||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  33145882 atgaaaggttaataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttataaaatcattcttgatatctagcatttt 33145980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 55 - 147
Target Start/End: Complemental strand, 36864920 - 36864827
Alignment:
Q  55 ttaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaat-ttttcttataaaatcattcttgatatctagcattttcc 147  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||| | |||||||||||||||||||||||||||||||    
T  36864920 ttaataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatcttttttgataaaatcattcttgatatctagcattttcc 36864827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 47 - 150
Target Start/End: Original strand, 47738281 - 47738385
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 145  Q
    ||||||| |||||||||||||||||||||||| | |||||||||||  ||||||||||||||| |||||| |||||||||||||||||||||| ||||||    
T  47738281 atgaaaggttaataaatgagactgaaatctaaggatgattattgtgccatgtcattcttgaatctttcttgataaaatcattcttgatatctaacatttt 47738380  T
Q  146 ccatt 150  Q
    |||||    
T  47738381 ccatt 47738385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 57 - 147
Target Start/End: Original strand, 40328011 - 40328102
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 147  Q
    ||||||| |||||||||||||| |||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  40328011 aataaataagactgaaatctaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatatctagcattttcc 40328102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 57 - 147
Target Start/End: Complemental strand, 8361924 - 8361834
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 147  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||   ||||||||||||||||||||||||||||    
T  8361924 aataaatgagactgaaatctaagggtgattattgtgtcatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttcc 8361834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 47 - 149
Target Start/End: Original strand, 26612916 - 26613019
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 145  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||  |||| |||||||||| |||||| ||||||||||| |||||||||| ||||||    
T  26612916 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgttattcttgaatctttcttaataaaatcattattgatatctaacatttt 26613015  T
Q  146 ccat 149  Q
    ||||    
T  26613016 ccat 26613019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 33839705 - 33839794
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatat 135  Q
    ||||||| |||||||||||||||||||| ||| |||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||    
T  33839705 atgaaaggttaataaatgagactgaaatttaagggtgattattgtgtcatgtcattcttgaatctttcttgataaaatcattcttgatat 33839794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 57 - 147
Target Start/End: Complemental strand, 9796914 - 9796824
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 147  Q
    ||||||||||||||||||||||  ||||||||||||  ||||||||||||||| ||||||   ||||||||||||||||||||||||||||    
T  9796914 aataaatgagactgaaatctaagagtgattattgtgacatgtcattcttgaatctttcttgataaatcattcttgatatctagcattttcc 9796824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 48 - 150
Target Start/End: Original strand, 24343720 - 24343823
Alignment:
Q  48 tgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaat-ttttcttataaaatcattcttgatatctagcattttc 146  Q
    |||||| ||||||||| |||||||||||||| |||||||||  | | ||||||||||||||| |||| | |||||||||||||||||||||| |||||||    
T  24343720 tgaaaggttaataaataagactgaaatctaagggtgattatcatatcatgtcattcttgaatcttttttgataaaatcattcttgatatctaacattttc 24343819  T
Q  147 catt 150  Q
    ||||    
T  24343820 catt 24343823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 47 - 145
Target Start/End: Original strand, 42921295 - 42921394
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatttt 145  Q
    ||||||| |||||||||||||||||||| ||| ||||||| |||||  ||||||||||| ||| |||||| |||||||||||||| ||||||||||||||    
T  42921295 atgaaaggttaataaatgagactgaaatttaagggtgattgttgtgccatgtcattcttaaatatttcttgataaaatcattcttaatatctagcatttt 42921394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 57 - 147
Target Start/End: Original strand, 41224414 - 41224504
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 147  Q
    ||||||||||| |||||| ||| |||||||||||||  ||||||||||||||| ||||||   ||||||||||||||||||||||||||||    
T  41224414 aataaatgagattgaaatttaagggtgattattgtgccatgtcattcttgaatatttcttgataaatcattcttgatatctagcattttcc 41224504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 47 - 150
Target Start/End: Original strand, 42298032 - 42298125
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    ||||||| |||||||||||||||||||||||| |||| ||||||||| ||||||||||||          ||||||||||||||||||| ||||||||||    
T  42298032 atgaaaggttaataaatgagactgaaatctaagggtggttattgtgtcatgtcattcttg----------ataaaatcattcttgatatttagcattttc 42298121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 47 - 146
Target Start/End: Original strand, 46919064 - 46919164
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaat-ttttcttataaaatcattcttgatatctagcatttt 145  Q
    |||| |||||||||||| |||| |||||||| ||||||||||| ||  |||||||| |||||| |||| | |||||||||||||||||||||| ||||||    
T  46919064 atgatagattaataaataagaccgaaatctagaggtgattattctgccatgtcattattgaatcttttttgataaaatcattcttgatatctaacatttt 46919163  T
Q  146 c 146  Q
    |    
T  46919164 c 46919164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 6041961 - 6041888
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||| |||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  6041961 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 6041888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 2754794 - 2754721
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    ||||||||||||||||||| ||  ||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  2754794 aaatctaaaggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 2754721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 3137402 - 3137475
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  |||||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  3137402 aaatctaagggtgattattttgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 3137475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 3574515 - 3574588
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  ||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  3574515 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 3574588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 9797017 - 9797082
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatat 135  Q
    |||||||| |||||||||| ||  |||||||||||||||||||||| | |||||| ||||||||||    
T  9797017 aaatctaatggtgattattctgccatgtcattcttgaatttttcttgagaaaatctttcttgatat 9797082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 33145789 - 33145717
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  ||||||||||| || |||| | |||||||| |||||||||| |||||||    
T  33145789 aaatctaagggtgattattctgccatgtcattcttaaaattttttaataaaatctttcttgatatatagcatt 33145717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 132
Target Start/End: Complemental strand, 41883106 - 41883031
Alignment:
Q  58 ataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttga 132  Q
    |||||| ||||||||||| |||| |||||||| |   ||||||||||||||| |||||| ||||||||||| ||||    
T  41883106 ataaataagactgaaatccaaagatgattattttaccatgtcattcttgaatctttcttcataaaatcatttttga 41883031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 116
Target Start/End: Original strand, 8362033 - 8362078
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt 116  Q
    |||||||| |||||||||| ||  ||||||||||||||||||||||    
T  8362033 aaatctaagggtgattattctgccatgtcattcttgaatttttctt 8362078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 11347345 - 11347272
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| ||| |||||| ||  ||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  11347345 aaatctaagggttattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 11347272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 84
Target Start/End: Original strand, 11347439 - 11347476
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtga 84  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  11347439 atgaaaaattaataaatgagattgaaatctaaaggtga 11347476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 37217041 - 37217114
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||| ||| |||||||||| ||  ||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  37217041 aaatttaagggtgattattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 37217114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 135
Target Start/End: Complemental strand, 47738182 - 47738117
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatat 135  Q
    |||||||||||| |||||| ||  || |||||||||||| |||||| |||||||| ||||||||||    
T  47738182 aaatctaaaggtaattattctgccatatcattcttgaatatttcttgataaaatctttcttgatat 47738117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 93; Significance: 4e-45; HSPs: 2)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 4537 - 4669
Alignment:
Q  18 gggtggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctta 117  Q
    |||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||  || |||||||| |||||||||||    
T  4537 gggtggtgggtgttatgtatctgttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatatcattcttaaatttttctta 4636  T
Q  118 taaaatcattcttgatatctagcattttccatt 150  Q
    |||||||||||||||||||||||||||||||||    
T  4637 taaaatcattcttgatatctagcattttccatt 4669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 4473 - 4400
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  ||||||||||| || ||||||| | |||||| |||||||||| |||||||    
T  4473 aaatctaagggtgattattctgccatgtcattcttaaaattttcttgaaaaaatctttcttgatatatagcatt 4400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 93; Significance: 4e-45; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 35445567 - 35445667
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  35445567 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgtcatatcattcttgaatttttcttataaaatcattcttgatatctagcattttc 35445666  T
Q  147 c 147  Q
    |    
T  35445667 c 35445667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 18 - 147
Target Start/End: Complemental strand, 48880851 - 48880722
Alignment:
Q  18 gggtggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctta 117  Q
    |||||||||||||||||||||        ||||||||||||||||||| ||||||||||||| ||||||||||||  |||||||||||||||||||||||    
T  48880851 gggtggtgggtgttatgtatcttttttttatgaaagattaataaatgaaactgaaatctaaatgtgattattgtgccatgtcattcttgaatttttctta 48880752  T
Q  118 taaaatcattcttgatatctagcattttcc 147  Q
    ||||||||||||||||||||||||||||||    
T  48880751 taaaatcattcttgatatctagcattttcc 48880722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 47 - 150
Target Start/End: Original strand, 30848739 - 30848842
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    |||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  30848739 atgaaagattaataaatgagactgaaatttaaaggtgattattgtgccatgtcattcttgaatttttcttataaaagcattcttgatatctagcattttc 30848838  T
Q  147 catt 150  Q
    ||||    
T  30848839 catt 30848842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 47 - 149
Target Start/End: Original strand, 24395141 - 24395243
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  24395141 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatcttttttataaaatcattcttgatatctagcattttc 24395240  T
Q  147 cat 149  Q
    |||    
T  24395241 cat 24395243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 3962148 - 3962248
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| || ||||||||||||||||||||||||||||||||||||    
T  3962148 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttggatatttcttataaaatcattcttgatatctagcattttc 3962247  T
Q  147 c 147  Q
    |    
T  3962248 c 3962248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 45637881 - 45637981
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  45637881 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttaatatctagcattttc 45637980  T
Q  147 c 147  Q
    |    
T  45637981 c 45637981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 50 - 147
Target Start/End: Complemental strand, 15577739 - 15577642
Alignment:
Q  50 aaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 147  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  15577739 aaagattaataaatgagactgaaatctaaaggtgattattgtgacatgtcattcttggatctttcttataaaatcattcttgatatctagcattttcc 15577642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 15329444 - 15329544
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  15329444 atgaaagattaataaatgagactgaaatctaaaagtgattattgtgccatgtcattcttgaatatttcttataaaatcattctttatatctagcattttc 15329543  T
Q  147 c 147  Q
    |    
T  15329544 c 15329544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 47 - 147
Target Start/End: Original strand, 34483008 - 34483108
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  34483008 atgaaagattaataaatgagattgaaatctaaaggtgattattgtgccatgtcattcttgaatctttcttataaaatcattcttgatatctaacattttc 34483107  T
Q  147 c 147  Q
    |    
T  34483108 c 34483108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 47 - 150
Target Start/End: Original strand, 35876414 - 35876517
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||  || ||||||||||||||||||||||||||||||||||||    
T  35876414 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcatttttagatatttcttataaaatcattcttgatatctagcattttc 35876513  T
Q  147 catt 150  Q
    ||||    
T  35876514 catt 35876517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 42611952 - 42612081
Alignment:
Q  18 gggtggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctta 117  Q
    ||||||||||||||||||||         ||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||  || |||||||    
T  42611952 gggtggtgggtgttatgtattttttttttatgaaagattaataaataagactgaaatctaaaggtgattattgtgccatgtcattcttagatctttctta 42612051  T
Q  118 taaaatcattcttgatatctagcattttcc 147  Q
    ||||||||||||||||||||||||||||||    
T  42612052 taaaatcattcttgatatctagcattttcc 42612081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 63 - 147
Target Start/End: Complemental strand, 25167735 - 25167651
Alignment:
Q  63 tgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 147  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25167735 tgagactgaaatctaaaggtgattattgtgccatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 25167651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 47 - 145
Target Start/End: Complemental strand, 4974630 - 4974532
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcatttt 145  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||  ||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  4974630 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgccatgtcattcttgaatcttttttataaaatcattcttgatatctagcatttt 4974532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 55 - 147
Target Start/End: Original strand, 42696261 - 42696354
Alignment:
Q  55 ttaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttcc 147  Q
    |||||||||||||||||||||||| ||||||||||||   ||||||||||||||||||| || ||||||||||| |||||||||| ||||||||    
T  42696261 ttaataaatgagactgaaatctaagggtgattattgtaccatgtcattcttgaattttttttgataaaatcattattgatatctaacattttcc 42696354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 47 - 138
Target Start/End: Original strand, 29737314 - 29737406
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatcta 138  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||  |||| |||||| ||| |||||| ||||||||||||||||||||||    
T  29737314 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgacatgttattcttaaatctttcttgataaaatcattcttgatatcta 29737406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 57 - 147
Target Start/End: Original strand, 15238564 - 15238654
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 147  Q
    |||||||||||||||||||||| | |||||||||||| ||||||||||| ||| ||| ||   ||||||||||||||||||||||||||||    
T  15238564 aataaatgagactgaaatctaaggatgattattgtgtcatgtcattcttaaatattttttgataaatcattcttgatatctagcattttcc 15238654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 57 - 146
Target Start/End: Complemental strand, 37476965 - 37476876
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    |||||||||||||||||||||| |||||||||||||  |||||||| || ||| ||||||   |||||||||||||||||||||||||||    
T  37476965 aataaatgagactgaaatctaagggtgattattgtgccatgtcattattaaatctttcttgataaatcattcttgatatctagcattttc 37476876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 50 - 145
Target Start/End: Complemental strand, 20009991 - 20009895
Alignment:
Q  50 aaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaat-ttttcttataaaatcattcttgatatctagcatttt 145  Q
    |||| ||||||||||||||| ||||||||   |||||||||||| ||||||||||||||| |||| | |||||||||||| ||||||||| ||||||    
T  20009991 aaaggttaataaatgagactaaaatctaagtatgattattgtgtcatgtcattcttgaatcttttttgataaaatcattcatgatatctatcatttt 20009895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 57 - 147
Target Start/End: Original strand, 18037157 - 18037247
Alignment:
Q  57 aataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttcc 147  Q
    |||||||| ||||||||||||| ||||||||||||   ||||||||||| ||| ||||||   |||||||| |||||||||||||||||||    
T  18037157 aataaatgtgactgaaatctaagggtgattattgtaccatgtcattcttaaatctttcttgataaatcattgttgatatctagcattttcc 18037247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 15329350 - 15329277
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||| |||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  15329350 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 15329277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 48880915 - 48880988
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||| |||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  48880915 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 48880988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 4974723 - 4974796
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  |||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  4974723 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 4974796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 42611888 - 42611815
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  |||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  42611888 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 42611815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 45637789 - 45637716
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  |||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  45637789 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 45637716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 83 - 150
Target Start/End: Complemental strand, 36790336 - 36790268
Alignment:
Q  83 gattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcattttccatt 150  Q
    ||||||||||| ||||||||||||||| ||| || |||||| |||| ||||||| ||||||||||||||    
T  36790336 gattattgtgtcatgtcattcttgaatctttgttgataaaaccattattgatatttagcattttccatt 36790268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 74 - 143
Target Start/End: Original strand, 15577841 - 15577911
Alignment:
Q  74 tctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    ||||| |||||||||| ||  |||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  15577841 tctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 15577911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 3962056 - 3961983
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||| ||| |||||||||| ||| ||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  3962056 aaatttaagggtgattattctgtcatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 3961983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 143
Target Start/End: Original strand, 20010086 - 20010158
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttg-aatttttcttataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||| |||||||||||| ||||||| | |||||||| |||||||||| |||||||    
T  20010086 aaatctaagggtgattattctgt-atgtcattcttgaaatttttttgataaaatctttcttgatatatagcatt 20010158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 34482912 - 34482839
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  ||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  34482912 aaatctaagggtgattattctgccatgtcattcttaaaattttcttaataaaatctttcttgatatatagcatt 34482839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 116
Target Start/End: Complemental strand, 15238459 - 15238414
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt 116  Q
    |||||||| |||||||||| ||  ||||||||||||||||||||||    
T  15238459 aaatctaatggtgattattctgccatgtcattcttgaatttttctt 15238414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 24395049 - 24394976
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    ||||||||||||  ||||| ||  ||||||||||| || ||||||| |||||||| |||||||||| |||||||    
T  24395049 aaatctaaaggttgttattctgccatgtcattcttaaaattttcttgataaaatctttcttgatatatagcatt 24394976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 35444635 - 35444562
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  |||||||||||||| ||||||| | |||||| ||||| |||| |||||||    
T  35444635 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttaatatatagcatt 35444562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 120 - 148
Target Start/End: Complemental strand, 40880668 - 40880640
Alignment:
Q  120 aaatcattcttgatatctagcattttcca 148  Q
    |||||||||||||||||||||||||||||    
T  40880668 aaatcattcttgatatctagcattttcca 40880640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 92; Significance: 2e-44; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 47 - 150
Target Start/End: Original strand, 48019 - 48122
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  48019 atgaaagattaataaatgagactgaaatctaaagatgattattgtgctatgtcattcttgaatctttcttataaaatcattcttgatatctagcattttc 48118  T
Q  147 catt 150  Q
    ||||    
T  48119 catt 48122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 47927 - 47854
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  |||||||||||||| ||||||| |||||||| |||||||||  |||||||    
T  47927 aaatctaagggtgattattctgccatgtcattcttgaaattttcttgataaaatctttcttgataaatagcatt 47854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 88; Significance: 4e-42; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 18 - 145
Target Start/End: Original strand, 12983 - 13110
Alignment:
Q  18 gggtggtgggtgttatgtatcnnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttctta 117  Q
    ||||||||| |||||||||||        |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  12983 gggtggtggatgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtaattattgtgtcatgtcattcttaaatttttctta 13082  T
Q  118 taaaatcattcttgatatctagcatttt 145  Q
    ||||||||||||||||||||||||||||    
T  13083 taaaatcattcttgatatctagcatttt 13110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 12919 - 12846
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| | |||||||| ||  |||||||||||||| ||||||| | |||||| |||||||||| |||||||    
T  12919 aaatctaaggatgattattctgccatgtcattcttgaaattttcttgaaaaaatctttcttgatatatagcatt 12846  T

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Target: scaffold0178 (Bit Score: 86; Significance: 6e-41; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 47 - 148
Target Start/End: Original strand, 11791 - 11892
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  11791 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgccatgtcattcttaaatttttcttataaaatcattcttgatatctaacattttc 11890  T
Q  147 ca 148  Q
    ||    
T  11891 ca 11892  T

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Target: scaffold0178; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 11698 - 11625
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||| |||||||||||||| ||||||| |||||||| |||||||||| |||||||    
T  11698 aaatctaagggtgattattctgtcatgtcattcttgaaattttcttgataaaatctttcttgatatatagcatt 11625  T

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Target: scaffold0096 (Bit Score: 78; Significance: 3e-36; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 47 - 148
Target Start/End: Original strand, 41180 - 41281
Alignment:
Q  47 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgttatgtcattcttgaatttttcttataaaatcattcttgatatctagcattttc 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||   || ||||||||| || ||||||||||||||||||||||||||||||||||||    
T  41180 atgaaagattaataaatgagactgaaatctaaaggtgattattgtaccatatcattcttggatctttcttataaaatcattcttgatatctagcattttc 41279  T
Q  147 ca 148  Q
    ||    
T  41280 ca 41281  T

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Target: scaffold0096; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 41088 - 41015
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttg-aatttttcttataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  |||||||||||| ||||||| | |||||||| |||||||||| |||||||    
T  41088 aaatctaagggtgattattctgccatgtcattcttgaaatttttttgataaaatctttcttgatatatagcatt 41015  T

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Target: scaffold0665 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 3145 - 3072
Alignment:
Q  71 aaatctaaaggtgattattgtgttatgtcattcttgaatttttctt-ataaaatcattcttgatatctagcatt 143  Q
    |||||||| |||||||||| ||  ||||||||||| || |||| || |||||||| |||||||||| |||||||    
T  3145 aaatctaagggtgattattctgccatgtcattcttaaaattttattgataaaatctttcttgatatatagcatt 3072  T

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Target: scaffold0041 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 120 - 148
Target Start/End: Original strand, 85615 - 85643
Alignment:
Q  120 aaatcattcttgatatctagcattttcca 148  Q
    |||||||||||||||||||||||||||||    
T  85615 aaatcattcttgatatctagcattttcca 85643  T

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