View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10278_low_5 (Length: 278)

Name: NF10278_low_5
Description: NF10278
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10278_low_5
NF10278_low_5
[»] scaffold0277 (2 HSPs)
scaffold0277 (8-278)||(13766-14036)
scaffold0277 (10-278)||(4805-5073)
[»] chr6 (76 HSPs)
chr6 (8-278)||(28780922-28781192)
chr6 (9-278)||(27724979-27725248)
chr6 (8-278)||(27611136-27611406)
chr6 (8-278)||(27718513-27718783)
chr6 (8-278)||(27698628-27698897)
chr6 (8-278)||(28786061-28786331)
chr6 (1-278)||(26802214-26802495)
chr6 (10-278)||(28792184-28792452)
chr6 (8-278)||(27229017-27229285)
chr6 (1-277)||(26655765-26656041)
chr6 (1-277)||(26761736-26762012)
chr6 (1-277)||(27604840-27605122)
chr6 (35-274)||(27338203-27338442)
chr6 (35-274)||(27398943-27399182)
chr6 (15-274)||(31284078-31284337)
chr6 (31-274)||(27678752-27678995)
chr6 (57-274)||(27593158-27593375)
chr6 (106-278)||(27531331-27531503)
chr6 (85-278)||(26884023-26884216)
chr6 (54-256)||(26622805-26623007)
chr6 (51-278)||(26646299-26646532)
chr6 (54-256)||(26728783-26728985)
chr6 (51-278)||(26752267-26752500)
chr6 (57-274)||(27677752-27677969)
chr6 (31-274)||(27706540-27706783)
chr6 (55-274)||(26861446-26861665)
chr6 (119-278)||(25481636-25481795)
chr6 (119-278)||(25579613-25579772)
chr6 (8-274)||(26823629-26823889)
chr6 (8-223)||(27427792-27428005)
chr6 (119-278)||(26142759-26142918)
chr6 (119-278)||(26055820-26055979)
chr6 (119-278)||(26075790-26075949)
chr6 (119-278)||(25538434-25538593)
chr6 (119-278)||(26048739-26048898)
chr6 (119-278)||(26069908-26070067)
chr6 (120-274)||(28234459-28234613)
chr6 (8-83)||(25538356-25538431)
chr6 (87-274)||(28325343-28325530)
chr6 (156-278)||(29825958-29826080)
chr6 (8-84)||(26055742-26055818)
chr6 (8-83)||(25481558-25481633)
chr6 (8-83)||(26048661-26048736)
chr6 (8-83)||(26069830-26069905)
chr6 (8-83)||(26075712-26075787)
chr6 (8-83)||(26142681-26142756)
chr6 (157-274)||(26848592-26848709)
chr6 (120-278)||(28226845-28227003)
chr6 (81-274)||(28185222-28185415)
chr6 (39-83)||(25579566-25579610)
chr6 (144-248)||(27214336-27214440)
chr6 (144-248)||(27234788-27234892)
chr6 (171-274)||(26635636-26635739)
chr6 (171-274)||(26741602-26741705)
chr6 (59-185)||(28098596-28098725)
chr6 (143-274)||(28181032-28181163)
chr6 (123-274)||(28242702-28242853)
chr6 (155-277)||(26949591-26949713)
chr6 (171-257)||(27665272-27665358)
chr6 (59-175)||(26342171-26342290)
chr6 (165-250)||(26617266-26617351)
chr6 (165-250)||(26723194-26723279)
chr6 (155-250)||(25071589-25071684)
chr6 (169-272)||(26811453-26811556)
chr6 (171-250)||(26959111-26959190)
chr6 (157-278)||(25507043-25507158)
chr6 (204-274)||(26937073-26937143)
chr6 (61-278)||(28139377-28139594)
chr6 (188-272)||(28491660-28491744)
chr6 (188-272)||(29804070-29804154)
chr6 (195-274)||(26893609-26893688)
chr6 (171-274)||(26974998-26975101)
chr6 (199-274)||(28149912-28149986)
chr6 (195-274)||(29467797-29467876)
chr6 (63-129)||(26018770-26018836)
chr6 (63-129)||(26139474-26139540)
[»] scaffold0349 (3 HSPs)
scaffold0349 (9-278)||(3556-3825)
scaffold0349 (8-278)||(14489-14758)
scaffold0349 (8-152)||(8061-8205)
[»] scaffold1254 (1 HSPs)
scaffold1254 (31-278)||(51-298)
[»] scaffold0419 (1 HSPs)
scaffold0419 (31-278)||(7331-7578)
[»] chr4 (8 HSPs)
chr4 (12-274)||(18699525-18699787)
chr4 (12-274)||(18731629-18731891)
chr4 (12-274)||(18679692-18679954)
chr4 (12-274)||(18655602-18655864)
chr4 (54-274)||(18724210-18724430)
chr4 (8-223)||(17989226-17989439)
chr4 (8-223)||(18073550-18073763)
chr4 (129-278)||(5091088-5091237)
[»] chr1 (3 HSPs)
chr1 (26-278)||(28164483-28164735)
chr1 (46-274)||(268482-268711)
chr1 (31-278)||(28127800-28128042)
[»] chr8 (2 HSPs)
chr8 (59-274)||(29273908-29274123)
chr8 (107-256)||(31903733-31903882)
[»] scaffold0003 (1 HSPs)
scaffold0003 (8-223)||(59358-59571)
[»] scaffold0038 (4 HSPs)
scaffold0038 (120-274)||(34620-34774)
scaffold0038 (87-274)||(116658-116845)
scaffold0038 (120-278)||(27343-27501)
scaffold0038 (123-274)||(42864-43015)
[»] scaffold0019 (1 HSPs)
scaffold0019 (87-274)||(58420-58607)
[»] chr5 (1 HSPs)
chr5 (158-274)||(16688944-16689060)
[»] chr2 (1 HSPs)
chr2 (168-274)||(17993822-17993928)
[»] scaffold0713 (1 HSPs)
scaffold0713 (63-129)||(5916-5982)


Alignment Details
Target: scaffold0277 (Bit Score: 211; Significance: 1e-116; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 8 - 278
Target Start/End: Complemental strand, 14036 - 13766
Alignment:
Q  8 tcattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctataca 107  Q
    |||||||||||||| |||| || |||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||| | ||    
T  14036 tcattcatattctgaattctcaaactcttttttcatccaatttctctcaattatcatggctatgcaattaccttcctcttcctcttcattttcctctgca 13937  T
Q  108 ttcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccatacct 207  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| | ||||    
T  13936 ttcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaagggaatcaaaacct 13837  T
Q  208 tcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  13836 tcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatct 13766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 10 - 278
Target Start/End: Complemental strand, 5073 - 4805
Alignment:
Q  10 attcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctatacatt 109  Q
    |||||||||||| |||| || |||||||||||||||||||||| |||||||| |||||||| |||||||||||||| ||||||||||||||||||  |||    
T  5073 attcatattctgaattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatcctcttcattttcctatggatt 4974  T
Q  110 cacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttc 209  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||| | ||||||    
T  4973 cacttaccaagtgttcctcagttttaggggcattgacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttc 4874  T
Q  210 attgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 278  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||||| ||||||    
T  4873 attgatgacaatgatcttcaaagaggagatgaaatcacaccatccctccgcaaggccattgatgaatct 4805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 211; Significance: 1e-116; HSPs: 76)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 8 - 278
Target Start/End: Original strand, 28780922 - 28781192
Alignment:
Q  8 tcattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctataca 107  Q
    |||||||||||||| |||| || |||||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||||| | ||    
T  28780922 tcattcatattctgaattctcaaactcttttttcatccaatttctctcaattatcatggctatgcaattaccttcctcttcctcttcattttcctctgca 28781021  T
Q  108 ttcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccatacct 207  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| | ||||    
T  28781022 ttcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaagggaatcaaaacct 28781121  T
Q  208 tcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  28781122 tcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatct 28781192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 9 - 278
Target Start/End: Complemental strand, 27725248 - 27724979
Alignment:
Q  9 cattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctatacat 108  Q
    |||||||||||||||||| || ||||||||||||||| |||||| |||||| |||||||||| |||||||||||||| ||||||||||||||||||  ||    
T  27725248 cattcatattctgcattctcaaactcttttttcatcctatttctctcaattgtcatggctatacaatcaccttcctcatcctcttcattttcctatggat 27725149  T
Q  109 tcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccatacctt 208  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  27725148 tcacttaccaagtgttccttagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaagggaatccatacctt 27725049  T
Q  209 cattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  27725048 cattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatct 27724979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 8 - 278
Target Start/End: Complemental strand, 27611406 - 27611136
Alignment:
Q  8 tcattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctataca 107  Q
    ||||||||||||||||||| || |||||||||||||||||||||| |||||| ||||||||||||||| | |||||||||| |||||||||||||||  |    
T  27611406 tcattcatattctgcattctcaaactcttttttcatccaatttctctcaattttcatggctatgcaattagcttcctcttcttcttcattttcctatgga 27611307  T
Q  108 ttcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccatacct 207  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  27611306 ttcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatccatacct 27611207  T
Q  208 tcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 278  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  27611206 tcattgatgacaatgatcttccaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatct 27611136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 8 - 278
Target Start/End: Complemental strand, 27718783 - 27718513
Alignment:
Q  8 tcattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctataca 107  Q
    ||||||||||||||||||| || ||||||||||||||| |||||| ||||||||||||||||| |||||||||||||| ||||||||||| ||| ||  |    
T  27718783 tcattcatattctgcattctcaaactcttttttcatcctatttctctcaattctcatggctatacaatcaccttcctcatcctcttcattctcccatgga 27718684  T
Q  108 ttcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccatacct 207  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  27718683 ttcacttaccaagtgttcctcagttttaggggcactgacactcggcacagttttaccggaaatctctacaaggctcttactgacaagggaatccatacct 27718584  T
Q  208 tcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  27718583 tcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatct 27718513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 8 - 278
Target Start/End: Complemental strand, 27698897 - 27698628
Alignment:
Q  8 tcattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctataca 107  Q
    ||||||||||||||||||| || ||||||||| ||||| |||||| ||||||||||||||||| |||||||||||||| ||| ||||||||||||||  |    
T  27698897 tcattcatattctgcattctcaaactcttttt-catcctatttctctcaattctcatggctatacaatcaccttcctcatccacttcattttcctatgga 27698799  T
Q  108 ttcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccatacct 207  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  27698798 ttcacttaccaagtgttcatcagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaagggaatccatacct 27698699  T
Q  208 tcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  27698698 tcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatct 27698628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 8 - 278
Target Start/End: Original strand, 28786061 - 28786331
Alignment:
Q  8 tcattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctataca 107  Q
    |||||||||||||| |||| || |||||||||||||||||||||| |||||||| |||||||| |||||||||||||| ||||||||||||||||||  |    
T  28786061 tcattcatattctgaattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatcctcttcattttcctatgga 28786160  T
Q  108 ttcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccatacct 207  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||| | ||||    
T  28786161 ttcacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaacct 28786260  T
Q  208 tcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  28786261 tcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatct 28786331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 278
Target Start/End: Original strand, 26802214 - 26802495
Alignment:
Q  1 aacttattcattcatattctgcattcccagactctttt----ttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcat 96  Q
    |||||| ||||||||||||||||||| || ||||||||    ||||||||||||||  ||||| ||||||||||||| || |||||||| ||||||||||    
T  26802214 aacttactcattcatattctgcattctcaaactcttttttttttcatccaatttctcacaattttcatggctatgcagtctccttcctcatcctcttcat 26802313  T
Q  97 tttcctatacattcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaaggg 196  Q
    |||| |||  ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||| |||||||||    
T  26802314 tttcttatggattcacttaccaagtgttcctcagttttaggggcactgacactcggtacggttttacgggcaatctctacaaggctcttattgacaaggg 26802413  T
Q  197 aatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26802414 aatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 26802495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 10 - 278
Target Start/End: Original strand, 28792184 - 28792452
Alignment:
Q  10 attcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctatacatt 109  Q
    |||||||||||| |||| || |||||||||||||||||||||| |||||||| |||||||| |||||||||||||| ||||||||||||||||||  |||    
T  28792184 attcatattctgaattctcaaactcttttttcatccaatttctctcaattcttatggctatacaatcaccttcctcatcctcttcattttcctatggatt 28792283  T
Q  110 cacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttc 209  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||| | ||||||    
T  28792284 cacttaccaagtgttcctcagttttaggggcactgacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatcaaaaccttc 28792383  T
Q  210 attgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  28792384 attgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccatcgaagaatct 28792452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 8 - 278
Target Start/End: Original strand, 27229017 - 27229285
Alignment:
Q  8 tcattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctataca 107  Q
    |||||||||||||||||||  | ||||||||  |||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||| |  |    
T  27229017 tcattcatattctgcattctaaaactctttt--catccaatttctctcaagtctcatggctatacaatcaccttcctcttcctcttcattttcctttgga 27229114  T
Q  108 ttcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccatacct 207  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  27229115 ttcacttaccaagtgttccttagttttaggggcactgacactcggcacggttttaccggcaatctctacaaggctcttactgacaagggaatccatacct 27229214  T
Q  208 tcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 278  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||    
T  27229215 tcattgatgacaatgatcttcaaagaggagacgaaatcacaccatcactcgtcaaggccattgacgaatct 27229285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 26655765 - 26656041
Alignment:
Q  1 aacttattcattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttc 100  Q
    |||||| |||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||| |||||||||||||| ||||||||||||||    
T  26655765 aacttactcattcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggctatacaatcaccttcctcatcctcttcattttc 26655864  T
Q  101 ctatacattcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatc 200  Q
    ||||   || |  ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||| |||||||||    
T  26655865 ctatgggtttaaataccaagtgttcctcagttttaggggcattgacacccggcacggttttaccggcaatctctacaaggctcttattgataagggaatc 26655964  T
Q  201 cataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatc 277  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||| | |||||||||||||||||    
T  26655965 catactttcattgatgacaatgatcttctcagaggagatgaaatcacaccatcactcgttaaggccattgaagaatc 26656041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 26761736 - 26762012
Alignment:
Q  1 aacttattcattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttc 100  Q
    |||||| |||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||| |||||||||||||| ||||||||||||||    
T  26761736 aacttactcattcatattctgcattcccaaactcttttttcatccattttctctcaattctcatggctatacaatcaccttcctcatcctcttcattttc 26761835  T
Q  101 ctatacattcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatc 200  Q
    ||||   || |  ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||| |||||||||    
T  26761836 ctatgggtttaaataccaagtgttcctcagttttaggggcattgacacccggcacggttttaccggcaatctctacaaggctcttattgataagggaatc 26761935  T
Q  201 cataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatc 277  Q
    ||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||| | |||||||||||||||||    
T  26761936 catactttcattgatgacaatgatcttctcagaggagatgaaatcacaccatcactcgttaaggccattgaagaatc 26762012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 27605122 - 27604840
Alignment:
Q  1 aacttattcattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctc------ttc 94  Q
    |||||| ||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||      |||    
T  27605122 aacttactcattcatattctgcattctcaaactcttttttcatccaatttctctcaattctcatggctatgcaattaccttcctcatcctcatcctcttc 27605023  T
Q  95 attttcctatacattcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaag 194  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||  |||||||||| ||||||||||||||||||||||||||||||    
T  27605022 attttcctatgcattcacttaccaagtgttccttagttttaggggcactgacactcgatacggttttaccggcaatctctacaaggctcttactgacaag 27604923  T
Q  195 ggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatc 277  Q
    ||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||  ||||||||||||| |||||    
T  27604922 ggaattcataccttcattgatgaaaatgatcttcgaagaggagatgaaatcacaccagcacttctcaaggccattgatgaatc 27604840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 35 - 274
Target Start/End: Complemental strand, 27338442 - 27338203
Alignment:
Q  35 ttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctatacattcacttaccaagtgttcctcagtttt 134  Q
    ||||||||||  |||||| ||||||||||||||||||||||||| |||||||||||||||| |||||| |   ||||  ||||| |||||||||||||||    
T  27338442 ttttttcatcttatttctctcaattctcatggctatgcaatcactttcctcttcctcttcaatttcctctgggttcaaataccatgtgttcctcagtttt 27338343  T
Q  135 aggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagag 234  Q
    |||| |||||||||||   |||||||||| |||||||||||||||||||||| ||||||||||||| | ||||||||||||||||| |||||| ||||||    
T  27338342 agggacattgacactctttacggttttaccggcaatctctacaaggctcttattgacaagggaatcaaaaccttcattgatgacaacgatcttgaaagag 27338243  T
Q  235 gagatgaaatcacaccatcactcatcaaggccattgaaga 274  Q
    ||||||||| ||||||||||||  ||||||||||||||||    
T  27338242 gagatgaaagcacaccatcacttgtcaaggccattgaaga 27338203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 35 - 274
Target Start/End: Complemental strand, 27399182 - 27398943
Alignment:
Q  35 ttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctatacattcacttaccaagtgttcctcagtttt 134  Q
    ||||||||||  |||||| ||||||||||||||||||||||||| |||||||||||||||| |||||| |   ||||  ||||| |||||||||||||||    
T  27399182 ttttttcatcttatttctctcaattctcatggctatgcaatcactttcctcttcctcttcaatttcctctgggttcaaataccatgtgttcctcagtttt 27399083  T
Q  135 aggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagag 234  Q
    |||| |||||||||||   |||||||||| |||||||||||||||||||||| ||||||||||||| | ||||||||||||||||| |||||| ||||||    
T  27399082 agggacattgacactctttacggttttaccggcaatctctacaaggctcttattgacaagggaatcaaaaccttcattgatgacaacgatcttgaaagag 27398983  T
Q  235 gagatgaaatcacaccatcactcatcaaggccattgaaga 274  Q
    ||||||||| ||||||||||||  ||||||||||||||||    
T  27398982 gagatgaaagcacaccatcacttgtcaaggccattgaaga 27398943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 15 - 274
Target Start/End: Original strand, 31284078 - 31284337
Alignment:
Q  15 tattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctatacattcactt 114  Q
    |||||||||||| || | ||||| ||||||||  |||| |||| ||||||||||||||||||| ||||||||||||||||| ||||||||  |||||  |    
T  31284078 tattctgcattctcaaattctttcttcatccatattctctcaaatctcatggctatgcaatcatcttcctcttcctcttcaatttcctatgtattcaaat 31284177  T
Q  115 accaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattga 214  Q
    ||||||| ||||| ||||| ||||| | |||||||||| | ||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  31284178 accaagtattccttagtttcaggggaagtgacactcggtatggtttcaccggcaatctctacaaggctcttactgacaagggaatccacaccttcattga 31284277  T
Q  215 tgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 274  Q
    ||| | ||| ||||||||||| |||||||||||||||||||||  ||| |||||||||||    
T  31284278 tgatagtgaacttcaaagaggggatgaaatcacaccatcactcgacaatgccattgaaga 31284337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 31 - 274
Target Start/End: Original strand, 27678752 - 27678995
Alignment:
Q  31 actcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctatacattcacttaccaagtgttcctcag 130  Q
    |||||||||||||| ||||||| | || ||||||||||||||||||||||||||||||| ||||| ||||||||   | ||  |||||||| ||||||||    
T  27678752 actcttttttcatctaatttctctaaaatctcatggctatgcaatcaccttcctcttccacttcaatttcctatgagtacaaataccaagtattcctcag 27678851  T
Q  131 ttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaa 230  Q
    ||| || || | |||||||||| ||||||| || || ||||||||||||||||||||||||||||||||| | |||||||||||| | |||| |||||||    
T  27678852 tttcagaggaagtgacactcggtacggtttcaccgggaatctctacaaggctcttactgacaagggaatcaacaccttcattgataagaatggtcttcaa 27678951  T
Q  231 agaggagatgaaatcacaccatcactcatcaaggccattgaaga 274  Q
    ||||||||||||||||||||||||||  ||||||||||||||||    
T  27678952 agaggagatgaaatcacaccatcacttctcaaggccattgaaga 27678995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 57 - 274
Target Start/End: Complemental strand, 27593375 - 27593158
Alignment:
Q  57 attctcatggctatgcaatcaccttcctcttcctcttcattttcctatacattcacttaccaagtgttcctcagttttaggggcattgacactcggcacg 156  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||   | ||  |||||||| ||||||||||| || || | |||||||||| |||    
T  27593375 attctcatggctatgcaatcaccttcctcttccacttcaatttcctatgattacaaataccaagtattcctcagtttcagaggaagtgacactcggtacg 27593276  T
Q  157 gttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 256  Q
    |||| || |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  27593275 gtttcaccggcaatctctacaaggctcttactgacaagggaatcaacaccttcattgatgacaatggtcttcaaagaggaaatgaaatcacaccatcact 27593176  T
Q  257 catcaaggccattgaaga 274  Q
      ||||||||||||||||    
T  27593175 tctcaaggccattgaaga 27593158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 106 - 278
Target Start/End: Complemental strand, 27531503 - 27531331
Alignment:
Q  106 cattcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccatac 205  Q
    |||||||||||||||||||||||||||||||||||   |||||||| ||||||||||| || ||||||||||||||||||||||||||||||||| ||||    
T  27531503 cattcacttaccaagtgttcctcagttttaggggcgcggacactcgccacggttttaccggaaatctctacaaggctcttactgacaagggaatctatac 27531404  T
Q  206 cttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |  || ||||||||| |||||    
T  27531403 cttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactaaaaaatgccattgaaaaatct 27531331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 85 - 278
Target Start/End: Original strand, 26884023 - 26884216
Alignment:
Q  85 cttcctcttcattttcctatacattcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctct 184  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||| || || | |||||||||| | ||||| ||||| |||||||||||||||||    
T  26884023 cttcctcttcattttcctatggattcacttaccaagtgttcctcagtttcagaggaagtgacactcggtatggtttcactggaaatctctacaaggctct 26884122  T
Q  185 tactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 278  Q
    |||| ||||||||||||| |||||||||||||| ||| |||||| |||||||   |||||||||||||||||||||||||||||||||||||||    
T  26884123 tactaacaagggaatccacaccttcattgatgataatcatcttccaagaggaagcgaaatcacaccatcactcatcaaggccattgaagaatct 26884216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 54 - 256
Target Start/End: Original strand, 26622805 - 26623007
Alignment:
Q  54 tcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctatacattcacttaccaagtgttcctcagttttaggggcattgacactcggc 153  Q
    |||||| ||||||||||||||||||| ||||||||||||||| ||||||||  |||||  |||||||||||||| ||||| || |||| ||||||||||     
T  26622805 tcaattatcatggctatgcaatcaccatcctcttcctcttcaatttcctatcaattcaaataccaagtgttcctaagtttcagaggcagtgacactcggt 26622904  T
Q  154 acggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatc 253  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||   ||| ||||||||||| || ||||||| ||||||    
T  26622905 acggtttcactggaaatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggacgaaatcaaaccatc 26623004  T
Q  254 act 256  Q
    |||    
T  26623005 act 26623007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 51 - 278
Target Start/End: Original strand, 26646299 - 26646532
Alignment:
Q  51 ctttcaattctcatggctatgcaatcaccttcc------tcttcctcttcattttcctatacattcacttaccaagtgttcctcagttttaggggcattg 144  Q
    |||||||||||||||||||||||||| ||||||      |||||||||| | |||||||   |||||| ||||| || |||||||  || ||||||| ||    
T  26646299 ctttcaattctcatggctatgcaatctccttcctattcctcttcctctttaatttcctacggattcacctaccaggtcttcctcaacttcaggggcagtg 26646398  T
Q  145 acactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaat 244  Q
    |||||||  |||||||||||||  ||||||||||||||||||||||||||||||| || ||||||||||||||   ||||||| | ||||||||||||||    
T  26646399 acactcgtgacggttttactggacatctctacaaggctcttactgacaagggaattcacaccttcattgatgattgtgatcttaagagaggagatgaaat 26646498  T
Q  245 cacaccatcactcatcaaggccattgaagaatct 278  Q
    ||||||||||||||||||||||||||||||||||    
T  26646499 cacaccatcactcatcaaggccattgaagaatct 26646532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 54 - 256
Target Start/End: Original strand, 26728783 - 26728985
Alignment:
Q  54 tcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctatacattcacttaccaagtgttcctcagttttaggggcattgacactcggc 153  Q
    |||||| ||||||||||||||||||| ||||||||||||||| ||||||||  |||||  |||||||||||||| ||||| || |||| ||||||||||     
T  26728783 tcaattatcatggctatgcaatcaccatcctcttcctcttcaatttcctatcaattcaaataccaagtgttcctaagtttcagaggcagtgacactcggt 26728882  T
Q  154 acggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatc 253  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||   ||| ||||||||||| || ||||||| ||||||    
T  26728883 acggtttcactggaaatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggacgaaatcaaaccatc 26728982  T
Q  254 act 256  Q
    |||    
T  26728983 act 26728985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 51 - 278
Target Start/End: Original strand, 26752267 - 26752500
Alignment:
Q  51 ctttcaattctcatggctatgcaatcaccttcc------tcttcctcttcattttcctatacattcacttaccaagtgttcctcagttttaggggcattg 144  Q
    |||||||||||||||||||||||||| ||||||      |||||||||| | |||||||   |||||| ||||| || |||||||  || ||||||| ||    
T  26752267 ctttcaattctcatggctatgcaatctccttcctattcctcttcctctttaatttcctacggattcacctaccaggtcttcctcaacttcaggggcagtg 26752366  T
Q  145 acactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaat 244  Q
    |||||||  |||||||||||||  ||||||||||||||||||||||||||||||| || ||||||||||||||   ||||||| | ||||||||||||||    
T  26752367 acactcgtgacggttttactggacatctctacaaggctcttactgacaagggaattcacaccttcattgatgattgtgatcttaagagaggagatgaaat 26752466  T
Q  245 cacaccatcactcatcaaggccattgaagaatct 278  Q
    ||||||||||||||||||||||||||||||||||    
T  26752467 cacaccatcactcatcaaggccattgaagaatct 26752500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 57 - 274
Target Start/End: Complemental strand, 27677969 - 27677752
Alignment:
Q  57 attctcatggctatgcaatcaccttcctcttcctcttcattttcctatacattcacttaccaagtgttcctcagttttaggggcattgacactcggcacg 156  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||   | ||  |||||||| ||||||| ||| || || | |||||||||| |||    
T  27677969 attctcatggctatgcaatcaccttcctcttccacttcaatttcctatgagtacaaataccaagtattcctcaatttcagaggaagtgacactcggtacg 27677870  T
Q  157 gttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 256  Q
    |||| || |||||||||||||||||||||  ||||||||||||||| |||||||||||  |  |||| ||||||||||| ||||||||||||||||||||    
T  27677869 gtttcaccggcaatctctacaaggctcttgatgacaagggaatccacaccttcattgacaatcatgaacttcaaagaggggatgaaatcacaccatcact 27677770  T
Q  257 catcaaggccattgaaga 274  Q
      ||||||||||||||||    
T  27677769 tctcaaggccattgaaga 27677752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 31 - 274
Target Start/End: Complemental strand, 27706783 - 27706540
Alignment:
Q  31 actcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctatacattcacttaccaagtgttcctcag 130  Q
    |||||||||||||| ||||||| | || ||||||||||||||||||||||| ||||||| ||||| ||||||||   | ||  |||||||| ||||||||    
T  27706783 actcttttttcatctaatttctctaaaatctcatggctatgcaatcacctttctcttccacttcaatttcctatgagtacaaataccaagtattcctcag 27706684  T
Q  131 ttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaa 230  Q
    ||| || ||   |||||||||| ||||||| || |||||||||||||||||| ||  ||||||||||||||| |||||||||||  |  |||| ||||||    
T  27706683 tttcagaggaggtgacactcggtacggtttcacaggcaatctctacaaggcttttgatgacaagggaatccacaccttcattgacaatcatgaacttcaa 27706584  T
Q  231 agaggagatgaaatcacaccatcactcatcaaggccattgaaga 274  Q
    ||| | ||||||||||||||||||||  ||||||||||||||||    
T  27706583 agaagggatgaaatcacaccatcacttctcaaggccattgaaga 27706540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 55 - 274
Target Start/End: Original strand, 26861446 - 26861665
Alignment:
Q  55 caattctcatggctatgcaatcaccttcctcttcctcttcattttcctatacattcacttaccaagtgttcctcagttttaggggcattgacactcggca 154  Q
    ||||||| ||||||||||||||||||| ||||||||||||  ||||||||  |||||  ||||| || ||||||||||| || || | |||||||||| |    
T  26861446 caattctgatggctatgcaatcaccttgctcttcctcttccatttcctatggattcaaataccaggtattcctcagtttcagaggaagtgacactcggta 26861545  T
Q  155 cggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatca 254  Q
     |||||||| || |||||||||||||||||||||||||||||||| || |||||||| |||||   ||| ||||||||||| |||||||||| |  ||||    
T  26861546 tggttttaccggtaatctctacaaggctcttactgacaagggaattcacaccttcatggatgatcgtgaacttcaaagaggggatgaaatcaaaagatca 26861645  T
Q  255 ctcatcaaggccattgaaga 274  Q
    |||  ||| |||||||||||    
T  26861646 ctcgacaatgccattgaaga 26861665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 119 - 278
Target Start/End: Original strand, 25481636 - 25481795
Alignment:
Q  119 agtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgac 218  Q
    ||||||||||| ||| ||||||| |||||||||  ||  |||||| || |||||||| |||||||||  |||||||||||| | ||| |||||||||||     
T  25481636 agtgttcctcaatttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctcttgttgacaagggaattcgtactttcattgatgaa 25481735  T
Q  219 aatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 278  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  25481736 aatgatcttcaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatct 25481795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 119 - 278
Target Start/End: Original strand, 25579613 - 25579772
Alignment:
Q  119 agtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgac 218  Q
    ||||||||||||||| || |||| |||||||||  ||  |||||| || |||||||| |||||||||  |||||||||||| | ||||||| |||||||     
T  25579613 agtgttcctcagtttcagaggcagtgacactcgcaacacttttaccggtaatctctataaggctcttgttgacaagggaattcgtaccttctttgatgat 25579712  T
Q  219 aatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 278  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  25579713 aatgatcttcaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatct 25579772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 8 - 274
Target Start/End: Original strand, 26823629 - 26823889
Alignment:
Q  8 tcattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctataca 107  Q
    ||||||||||||||||||| || ||||||| ||| |||||||||| |||||||||||||||||||| ||| ||||      ||||||| |||| |||       
T  26823629 tcattcatattctgcattctcaaactctttcttcgtccaatttctctcaattctcatggctatgcagtcaacttc------ctcttcagtttcatatgat 26823722  T
Q  108 ttcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccatacct 207  Q
    ||||  ||||||||||| ||||||||||| |||  |||||||||| | |  ||||| ||||||||||||||||||||||| |||||||||||||| ||||    
T  26823723 ttcaaataccaagtgtttctcagttttagaggcgctgacactcggtatgaatttaccggcaatctctacaaggctcttacagacaagggaatccacacct 26823822  T
Q  208 tcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 274  Q
    |  |||||||   ||| ||||||||||| ||| |||||  || ||||||||  || |||||||||||    
T  26823823 tttttgatgatcgtgaacttcaaagaggggataaaatcgaacaatcactcaataatgccattgaaga 26823889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 8 - 223
Target Start/End: Complemental strand, 27428005 - 27427792
Alignment:
Q  8 tcattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctataca 107  Q
    ||||||||||||||||||| || |||||| |  ||||  |||||| |||||||||||||| ||||||| ||||| || ||||||||||||||||||| ||    
T  27428005 tcattcatattctgcattctcaaactcttct--catcttatttctctcaattctcatggccatgcaattacctttctattcctcttcattttcctatgca 27427908  T
Q  108 ttcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccatacct 207  Q
    |||| |||| | |||||||||| || || |||||  ||||||||| ||||||| || ||||||||||  |||||||||| |||||||||||| | |||||    
T  27427907 ttcagttacgatgtgttcctcatttgtaagggcaccgacactcggtacggtttcaccggcaatctcttgaaggctcttattgacaagggaattcgtacct 27427808  T
Q  208 tcattgatgacaatga 223  Q
    ||  ||||||| ||||    
T  27427807 tccatgatgacgatga 27427792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 119 - 278
Target Start/End: Original strand, 26142759 - 26142918
Alignment:
Q  119 agtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgac 218  Q
    ||||||||||||||| ||||||| |||||||||  ||   ||||| || |||||||| |||||||||  |||||||||||| | ||| |||||||||||     
T  26142759 agtgttcctcagtttcaggggcagtgacactcgcaacaaatttaccggtaatctctataaggctcttgttgacaagggaattcgtactttcattgatgat 26142858  T
Q  219 aatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 278  Q
    ||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  26142859 aatgatcttgaaagaggagatgaaatcacaccatcacttgtcaaggccattgaagaatct 26142918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 119 - 278
Target Start/End: Original strand, 26055820 - 26055979
Alignment:
Q  119 agtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgac 218  Q
    ||||||||||| ||| ||||||| |||||||||  ||  |||||| || |||||||| |||||||||  ||||||||||||  |||| |||||||||||     
T  26055820 agtgttcctcattttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctcttgttgacaagggaattaatactttcattgatgaa 26055919  T
Q  219 aatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 278  Q
    |||||||||||||||||||||||||||||| |||||||  |||||||||| |||||||||    
T  26055920 aatgatcttcaaagaggagatgaaatcacatcatcacttgtcaaggccatcgaagaatct 26055979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 119 - 278
Target Start/End: Original strand, 26075790 - 26075949
Alignment:
Q  119 agtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgac 218  Q
    ||||||||||| ||| ||||||| |||||||||  ||  |||||| || |||||||| |||||||||  ||||||||||||  |||| |||||||||||     
T  26075790 agtgttcctcaatttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctcttgttgacaagggaattaatactttcattgatgaa 26075889  T
Q  219 aatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 278  Q
    |||||||||||||||||||||||||||||| |||||||  |||||||||| |||||||||    
T  26075890 aatgatcttcaaagaggagatgaaatcacatcatcacttgtcaaggccatcgaagaatct 26075949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 119 - 278
Target Start/End: Original strand, 25538434 - 25538593
Alignment:
Q  119 agtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgac 218  Q
    ||||||||||||||| ||||||| |||||||||  ||   ||||| || |||||||| |||||||||  ||||||||||||   ||| ||||| |||||     
T  25538434 agtgttcctcagtttcaggggcagtgacactcgcaacaaatttaccggtaatctctataaggctcttgttgacaagggaattagtactttcatagatgat 25538533  T
Q  219 aatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 278  Q
    ||||||||| ||||||||||||||||||||||||||||  |||||||||| |||||||||    
T  25538534 aatgatcttgaaagaggagatgaaatcacaccatcacttgtcaaggccatcgaagaatct 25538593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 119 - 278
Target Start/End: Original strand, 26048739 - 26048898
Alignment:
Q  119 agtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgac 218  Q
    ||||||||||||||| ||||||| |||||||||  ||  |||||| || |||||||| |||||||| | ||||||||||||   ||| |||||||||||     
T  26048739 agtgttcctcagtttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctctcattgacaagggaatttgtactttcattgatgat 26048838  T
Q  219 aatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 278  Q
    ||||||||| ||||||||||||||||||||||   |||  |||||||||| |||||||||    
T  26048839 aatgatcttgaaagaggagatgaaatcacacccaaacttgtcaaggccatggaagaatct 26048898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 119 - 278
Target Start/End: Original strand, 26069908 - 26070067
Alignment:
Q  119 agtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgac 218  Q
    ||||||||||||||| ||||||| |||||||||  ||  |||||| || |||||||| |||||||| | ||||||||||||   ||| |||||||||||     
T  26069908 agtgttcctcagtttcaggggcagtgacactcgcaacaattttaccggtaatctctataaggctctcattgacaagggaatttgtactttcattgatgat 26070007  T
Q  219 aatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 278  Q
    ||||||||| ||||||||||||||||||||||   |||  |||||||||| |||||||||    
T  26070008 aatgatcttgaaagaggagatgaaatcacacccaaacttgtcaaggccatggaagaatct 26070067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 120 - 274
Target Start/End: Original strand, 28234459 - 28234613
Alignment:
Q  120 gtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgaca 219  Q
    |||||||| |||||||| || | |||||||||  | |||||||| |  |||||||| |  ||||||  | ||||||||||||| ||||||||||||||||    
T  28234459 gtgttccttagttttagaggtagtgacactcgctatggttttaccgaaaatctctatagagctctttgtcacaagggaatccacaccttcattgatgaca 28234558  T
Q  220 atgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 274  Q
      || |||||| ||||||||||||| |||||||||||  ||||||||||||||||    
T  28234559 gggagcttcaaggaggagatgaaataacaccatcacttttcaaggccattgaaga 28234613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 25538356 - 25538431
Alignment:
Q  8 tcattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcc 83  Q
    ||||||||||||| ||||  || | ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  25538356 tcattcatattctccattttcaaagtcttttttcatccaaattctttcaattctcatggctatgcaatcaccttcc 25538431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 87 - 274
Target Start/End: Original strand, 28325343 - 28325530
Alignment:
Q  87 tcctcttcattttcctatacattcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctctta 186  Q
    |||||||| |||||||||  |||||| ||  | |||||||| |||||||| || | |||||||||  | ||||||||||| ||||||||||| | ||||     
T  28325343 tcctcttccttttcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatcttt 28325442  T
Q  187 ctgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 274  Q
     |   ||| |||| | |||||||||||||||||| || |||||| |||| || ||||| ||||| |||||  ||||||||||||||||    
T  28325443 gtaggaagagaattcgtaccttcattgatgacaaagaccttcaacgaggtgacgaaataacaccgtcacttttcaaggccattgaaga 28325530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 156 - 278
Target Start/End: Original strand, 29825958 - 29826080
Alignment:
Q  156 ggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcac 255  Q
    |||||||| |||||||||||||| ||||| |||||||||  ||| |  ||||||||||||||||| || ||||||||||| || ||||||||||| ||||    
T  29825958 ggttttaccggcaatctctacaaagctctaactgacaagaaaattcgcaccttcattgatgacaaagagcttcaaagaggggacgaaatcacaccctcac 29826057  T
Q  256 tcatcaaggccattgaagaatct 278  Q
    |  | ||||| ||| ||||||||    
T  29826058 ttgtgaaggcaattcaagaatct 29826080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 84
Target Start/End: Original strand, 26055742 - 26055818
Alignment:
Q  8 tcattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcct 84  Q
    ||||||||||||| ||||  || | ||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  26055742 tcattcatattctccattttcaaagtcttttttcatccatattctttcaattctcatggctatgcaatcaccttcct 26055818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 25481558 - 25481633
Alignment:
Q  8 tcattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcc 83  Q
    ||||||||||||| ||||  || | | ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  25481558 tcattcatattctccattttcaaagttttttttcatccaaattctttcaattctcatggctatgcaatcaccttcc 25481633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 26048661 - 26048736
Alignment:
Q  8 tcattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcc 83  Q
    ||||||||||||| ||||  || | ||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  26048661 tcattcatattctccattttcaaagtcttttttcatccatattctttcaattctcatggctatgcaatcaccttcc 26048736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 26069830 - 26069905
Alignment:
Q  8 tcattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcc 83  Q
    ||||||||||||| ||||  || | ||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  26069830 tcattcatattctccattttcaaagtcttttttcatccatattctttcaattctcatggctatgcaatcaccttcc 26069905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 26075712 - 26075787
Alignment:
Q  8 tcattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcc 83  Q
    ||||||||||||| ||||  || | ||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  26075712 tcattcatattctccattttcaaagtcttttttcatccatattctttcaattctcatggctatgcaatcaccttcc 26075787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 26142681 - 26142756
Alignment:
Q  8 tcattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcc 83  Q
    ||||||||||||| ||||  || | ||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  26142681 tcattcatattctccattttcaaagtcttttttcatccatattctttcaattctcatggctatgcaatcaccttcc 26142756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 157 - 274
Target Start/End: Original strand, 26848592 - 26848709
Alignment:
Q  157 gttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 256  Q
    |||| ||||| |||||||| || |||||| ||||||| |||||||  ||||||||||||||||| |||||||| || || ||||| |||||||| || ||    
T  26848592 gtttcactggtaatctctataaagctctttctgacaatggaatccgaaccttcattgatgacaaggatcttcagagtggtgatgagatcacaccttcgct 26848691  T
Q  257 catcaaggccattgaaga 274  Q
    | |||||  |||||||||    
T  26848692 cctcaagaacattgaaga 26848709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 120 - 278
Target Start/End: Original strand, 28226845 - 28227003
Alignment:
Q  120 gtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgaca 219  Q
    |||||||| |||||||| || |||||||||||  | ||||||||||| ||||||||||  | ||||  | | |||||||| || || ||| ||||||| |    
T  28226845 gtgttccttagttttagaggtattgacactcgttatggttttactggaaatctctacagtgatctttgtaagaagggaattcacacattctttgatgata 28226944  T
Q  220 atgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 278  Q
      || |||||| |||| |||||||| ||| |||||||  |||||| |||||||||||||    
T  28226945 gagagcttcaaggaggtgatgaaataacatcatcacttttcaaggtcattgaagaatct 28227003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 81 - 274
Target Start/End: Original strand, 28185222 - 28185415
Alignment:
Q  81 tcctcttcctcttcattttcctatacattcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaagg 180  Q
    ||||| |||||||| || ||||||  |||||| ||  | |||||||| || ||||| || | |||||||||  |  |||||||||| |||||| | |  |    
T  28185222 tcctcatcctcttccttctcctatggattcacctatgacgtgttccttagctttagaggtagtgacactcgttatcgttttactggaaatctcaatagag 28185321  T
Q  181 ctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 274  Q
    |||||  ||||||||||||||  |||||||| |||||||  || |||||| |||| || ||||| ||| |||||||  ||||||||||||||||    
T  28185322 ctctttgtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgaagaaataacatcatcacttttcaaggccattgaaga 28185415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 39 - 83
Target Start/End: Original strand, 25579566 - 25579610
Alignment:
Q  39 ttcatccaatttctttcaattctcatggctatgcaatcaccttcc 83  Q
    ||||||||| |||||||||||||||||||||||||||||||||||    
T  25579566 ttcatccaaattctttcaattctcatggctatgcaatcaccttcc 25579610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 248
Target Start/End: Original strand, 27214336 - 27214440
Alignment:
Q  144 gacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaa 243  Q
    |||||||| |||||||| || || |||||||| || ||||||  |||||| |||||||  ||||||||||||||||| || ||||| ||||| || ||||    
T  27214336 gacactcgacacggtttcaccggtaatctctataaagctctttgtgacaaaggaatccgaaccttcattgatgacaaggagcttcagagaggtgacgaaa 27214435  T
Q  244 tcaca 248  Q
    |||||    
T  27214436 tcaca 27214440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 248
Target Start/End: Complemental strand, 27234892 - 27234788
Alignment:
Q  144 gacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaa 243  Q
    |||||||| |||||||| || || |||||||| || ||||||  |||||| |||||||  ||||||||||||||||| || ||||| ||||| || ||||    
T  27234892 gacactcgacacggtttcaccggtaatctctataaagctctttgtgacaaaggaatccgaaccttcattgatgacaaggagcttcagagaggtgacgaaa 27234793  T
Q  244 tcaca 248  Q
    |||||    
T  27234792 tcaca 27234788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 274
Target Start/End: Original strand, 26635636 - 26635739
Alignment:
Q  171 ctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattg 270  Q
    ||||| || |||||| ||||||| |||||| | ||||||||||||||||| || ||| ||| ||| |||||||||||||| || ||| |||||  |||||    
T  26635636 ctctataaagctctttctgacaaaggaatcaacaccttcattgatgacaaggagcttaaaaaaggggatgaaatcacaccttcgctcctcaagagcattg 26635735  T
Q  271 aaga 274  Q
    ||||    
T  26635736 aaga 26635739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 171 - 274
Target Start/End: Original strand, 26741602 - 26741705
Alignment:
Q  171 ctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattg 270  Q
    ||||| || |||||| ||||||| |||||| | ||||||||||||||||| || ||| ||| ||| |||||||||||||| || ||| |||||  |||||    
T  26741602 ctctataaagctctttctgacaaaggaatcaacaccttcattgatgacaaggagcttaaaaaaggggatgaaatcacaccttcgctcctcaagagcattg 26741701  T
Q  271 aaga 274  Q
    ||||    
T  26741702 aaga 26741705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 59 - 185
Target Start/End: Complemental strand, 28098725 - 28098596
Alignment:
Q  59 tctcatggctatgc---aatcaccttcctcttcctcttcattttcctatacattcacttaccaagtgttcctcagttttaggggcattgacactcggcac 155  Q
    ||||||||||||||   ||||| ||||||||| ||||||||| || |||  |||||| ||  | ||||| || | |||||||||||  ||||||||| |     
T  28098725 tctcatggctatgctccaatcatcttcctctttctcttcattctcttatggattcacctatgacgtgtttcttaattttaggggcaccgacactcggtat 28098626  T
Q  156 ggttttactggcaatctctacaaggctctt 185  Q
    ||||||||||| ||||||||||| ||||||    
T  28098625 ggttttactggaaatctctacaaagctctt 28098596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 143 - 274
Target Start/End: Original strand, 28181032 - 28181163
Alignment:
Q  143 tgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaa 242  Q
    |||||||||  | ||||||||||| |||||| | |  ||||||  ||||||||||||||  |||||||| |||||||  || |||||| |||| || |||    
T  28181032 tgacactcgttatggttttactggaaatctcaatagagctctttgtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgaagaa 28181131  T
Q  243 atcacaccatcactcatcaaggccattgaaga 274  Q
    || ||| |||||||  ||||||||||||||||    
T  28181132 ataacatcatcacttttcaaggccattgaaga 28181163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 274
Target Start/End: Original strand, 28242702 - 28242853
Alignment:
Q  123 ttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatg 222  Q
    ||||| |||||||| || | |||||||||  | ||||||||||| ||||||||||| | ||||  | | |||||||| |  ||||||||||||||||  |    
T  28242702 ttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagag 28242801  T
Q  223 atcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 274  Q
    | |||| | |||| ||  |||| |||||||||||  ||||||||||||||||    
T  28242802 aacttccaggaggtgacaaaataacaccatcacttttcaaggccattgaaga 28242853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 277
Target Start/End: Original strand, 26949591 - 26949713
Alignment:
Q  155 cggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatca 254  Q
    |||||| || || |||||||| || |||||  |||||||||||||||  |||||||||||||| || || ||||| | ||| || ||||||||||| |||    
T  26949591 cggtttcaccggtaatctctataaagctctctctgacaagggaatccgaaccttcattgatgataaggagcttcagaaaggtgacgaaatcacaccttca 26949690  T
Q  255 ctcatcaaggccattgaagaatc 277  Q
    ||| |||||   |||||||||||    
T  26949691 ctcctcaagagaattgaagaatc 26949713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 257
Target Start/End: Complemental strand, 27665358 - 27665272
Alignment:
Q  171 ctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactc 257  Q
    ||||| ||||||||| ||||||| |||||||| ||||||||||||||||| || |||| ||  || || ||||||||||| ||||||    
T  27665358 ctctataaggctctttctgacaaaggaatccacaccttcattgatgacaaggagcttccaactggtgacgaaatcacaccttcactc 27665272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 26342290 - 26342171
Alignment:
Q  59 tctcatggctatgc---aatcaccttcctcttcctcttcattttcctatacattcacttaccaagtgttcctcagttttaggggcattgacactcggcac 155  Q
    ||||||||||||||   ||||| | ||||||| ||||||||| || |||  |||||| ||  | |||||||||| |||||||||||||| ||||||  |     
T  26342290 tctcatggctatgctccaatcatcgtcctctttctcttcattctcatatggattcacatatgatgtgttcctcaattttaggggcattggcactcgctat 26342191  T
Q  156 ggttttactggcaatctcta 175  Q
    ||||||||||||||| ||||    
T  26342190 ggttttactggcaatatcta 26342171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 26617266 - 26617351
Alignment:
Q  165 ggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacacc 250  Q
    ||||||||||| || ||||||  |||||| ||| |||  ||||||||||||||||| || ||||| ||||| ||||||||||||||    
T  26617266 ggcaatctctataaagctctttgtgacaaaggagtccgaaccttcattgatgacaaggagcttcagagaggtgatgaaatcacacc 26617351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 250
Target Start/End: Original strand, 26723194 - 26723279
Alignment:
Q  165 ggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacacc 250  Q
    ||||||||||| || ||||||  |||||| ||| |||  ||||||||||||||||| || ||||| ||||| ||||||||||||||    
T  26723194 ggcaatctctataaagctctttgtgacaaaggagtccgaaccttcattgatgacaaggagcttcagagaggtgatgaaatcacacc 26723279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 250
Target Start/End: Original strand, 25071589 - 25071684
Alignment:
Q  155 cggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacacc 250  Q
    ||||||||| || ||||| || || |||||| ||||||| |||||||| ||||| ||||||||||| || ||| | ||||| || |||||||||||    
T  25071589 cggttttaccggtaatctttataaagctctttctgacaaaggaatccacacctttattgatgacaaagagcttaagagaggtgacgaaatcacacc 25071684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 272
Target Start/End: Original strand, 26811453 - 26811556
Alignment:
Q  169 atctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccat 268  Q
    ||||||| || ||||||  |||||| |||||||  ||||||||||||||||| || ||||| ||||| || ||||||||||| || ||| |||||  |||    
T  26811453 atctctataaagctctttgtgacaaaggaatccgaaccttcattgatgacaaggagcttcagagaggtgacgaaatcacaccttcgctcctcaagagcat 26811552  T
Q  269 tgaa 272  Q
    ||||    
T  26811553 tgaa 26811556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 250
Target Start/End: Original strand, 26959111 - 26959190
Alignment:
Q  171 ctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacacc 250  Q
    ||||| || |||||| ||||||| |||||| | ||||||||||||||||| || ||| ||| ||| ||||||||||||||    
T  26959111 ctctataaagctctttctgacaaaggaatcgacaccttcattgatgacaaagagcttaaaaaaggggatgaaatcacacc 26959190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 278
Target Start/End: Complemental strand, 25507158 - 25507043
Alignment:
Q  157 gttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 256  Q
    |||||||| || ||||||||| ||||||   |||||||||||| ||      |||||||||   ||||||  |||||||||||||||||||||||||| |    
T  25507158 gttttactagccatctctacacggctctatatgacaagggaattca------cattgatgattgtgatctgaaaagaggagatgaaatcacaccatcagt 25507065  T
Q  257 catcaaggccattgaagaatct 278  Q
    | |||  |||||||||||||||    
T  25507064 cgtcatcgccattgaagaatct 25507043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 274
Target Start/End: Original strand, 26937073 - 26937143
Alignment:
Q  204 accttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 274  Q
    ||||||||||||||||| || || ||  ||||||| |||||||||||||||||  ||||||| ||||||||    
T  26937073 accttcattgatgacaaggagctccatggaggagaagaaatcacaccatcacttgtcaaggcaattgaaga 26937143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 61 - 278
Target Start/End: Original strand, 28139377 - 28139594
Alignment:
Q  61 tcatggctatgcaatcaccttcctcttcctcttcattttcctatacattcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttt 160  Q
    |||||||| ||||| ||||||| |||||  |||| || ||||||   ||||| ||| | || || ||||| || || |||| |||||||||   ||||||    
T  28139377 tcatggctttgcaaccaccttcttcttctacttctttctcctatggcttcacatacgatgtctttctcagcttcagaggcagtgacactcgtttcggttt 28139476  T
Q  161 tactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatc 260  Q
     ||||| ||||||||||| ||||||  ||||   |||||||| || || |||||||| |  || |||||| |||| || |||||  |||| |||||| |     
T  28139477 cactggaaatctctacaaagctcttcgtgactgtggaatccacacttttattgatgatagggagcttcaaggaggtgacgaaatatcaccgtcactcgta 28139576  T
Q  261 aaggccattgaagaatct 278  Q
    || |||||||||||||||    
T  28139577 aaagccattgaagaatct 28139594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 272
Target Start/End: Complemental strand, 28491744 - 28491660
Alignment:
Q  188 tgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaa 272  Q
    |||||| ||| ||| ||| ||||| || ||| | || ||||||| ||| || ||||||||||||||||||||||| |||||||||    
T  28491744 tgacaaaggagtccgtactttcatggacgacgaggagcttcaaaaaggtgaagaaatcacaccatcactcatcaaagccattgaa 28491660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 272
Target Start/End: Complemental strand, 29804154 - 29804070
Alignment:
Q  188 tgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaa 272  Q
    |||||| ||| ||| ||| ||||| || ||| | || ||||||| ||| || ||||||||||||||||||||||| |||||||||    
T  29804154 tgacaaaggagtccgtactttcatggacgacgaggagcttcaaaaaggtgaagaaatcacaccatcactcatcaaagccattgaa 29804070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 274
Target Start/End: Complemental strand, 26893688 - 26893609
Alignment:
Q  195 ggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 274  Q
    ||||| || |||||||||||||| |  || ||||| ||||| || |||||| |||||||||| |||||||| ||||||||    
T  26893688 ggaattcacaccttcattgatgatacagagcttcatagaggtgacgaaatctcaccatcacttatcaaggcaattgaaga 26893609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 171 - 274
Target Start/End: Original strand, 26974998 - 26975101
Alignment:
Q  171 ctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattg 270  Q
    ||||| || |||||| ||||||| |||||| | | ||||||||||||||| || ||| ||| ||| || ||||||||||| || ||| |||||  |||||    
T  26974998 ctctataaagctctttctgacaaaggaatcaacatcttcattgatgacaaggagcttaaaaaaggggacgaaatcacaccttcgctcctcaagagcattg 26975097  T
Q  271 aaga 274  Q
    ||||    
T  26975098 aaga 26975101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 199 - 274
Target Start/End: Original strand, 28149912 - 28149986
Alignment:
Q  199 tccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 274  Q
    |||| |||||||||||||| |  || ||| || |||| || |||||||||||||||||| ||||||||||||||||    
T  28149912 tccacaccttcattgatgatacggagctttaacgaggggacgaaatcacaccatcactc-tcaaggccattgaaga 28149986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 274
Target Start/End: Original strand, 29467797 - 29467876
Alignment:
Q  195 ggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 274  Q
    ||||| || |||||||| |||||  | || ||||||| ||| || ||||||||||||||||||||||| || ||||||||    
T  29467797 ggaattcacaccttcatggatgatgaagaacttcaaaaaggcgaagaaatcacaccatcactcatcaaagctattgaaga 29467876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 129
Target Start/End: Complemental strand, 26018836 - 26018770
Alignment:
Q  63 atggctatgcaatcaccttcctcttcctcttcattttcctatacattcacttaccaagtgttcctca 129  Q
    |||||||| ||||||||||| ||| |||| || |||||||||  | |||| ||||||||||||||||    
T  26018836 atggctattcaatcaccttcgtctacctcatccttttcctatggactcacataccaagtgttcctca 26018770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 129
Target Start/End: Complemental strand, 26139540 - 26139474
Alignment:
Q  63 atggctatgcaatcaccttcctcttcctcttcattttcctatacattcacttaccaagtgttcctca 129  Q
    |||| ||| ||||||||||||||| |||| || |||||||||  | |||| ||||||||||||||||    
T  26139540 atggttattcaatcaccttcctctacctcatccttttcctatggactcacataccaagtgttcctca 26139474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 210; Significance: 1e-115; HSPs: 3)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 9 - 278
Target Start/End: Complemental strand, 3825 - 3556
Alignment:
Q  9 cattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctatacat 108  Q
    |||||||||||||||||| || ||||||||||||||| |||||| |||||| |||||||||| |||||||||||||| ||||||||||||||||||  ||    
T  3825 cattcatattctgcattctcaaactcttttttcatcctatttctctcaattgtcatggctatacaatcaccttcctcatcctcttcattttcctatggat 3726  T
Q  109 tcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccatacctt 208  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  3725 tcacttaccaagtgttccttagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaagggaatccatacctt 3626  T
Q  209 cattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  3625 cattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatct 3556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #2
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 8 - 278
Target Start/End: Complemental strand, 14758 - 14489
Alignment:
Q  8 tcattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctataca 107  Q
    ||||||||||||||||||| || ||||||||| ||||| |||||| ||||||||||||||||| |||||||||||||| ||| ||||||||||||||  |    
T  14758 tcattcatattctgcattctcaaactcttttt-catcctatttctctcaattctcatggctatacaatcaccttcctcatccacttcattttcctatgga 14660  T
Q  108 ttcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccatacct 207  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  14659 ttcacttaccaagtgttcatcagttttaggggcactgacactcggcacggttttaccggaaatctctacaaggctcttactgacaagggaatccatacct 14560  T
Q  208 tcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 278  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  14559 tcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcctcaaggccattgatgaatct 14489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 8 - 152
Target Start/End: Complemental strand, 8205 - 8061
Alignment:
Q  8 tcattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctataca 107  Q
    ||||||||||||||||||| || ||||||||||||||| |||||| ||||||||||||||||| |||||||||||||| ||||||||||| ||| ||  |    
T  8205 tcattcatattctgcattctcaaactcttttttcatcctatttctctcaattctcatggctatacaatcaccttcctcatcctcttcattctcccatgga 8106  T
Q  108 ttcacttaccaagtgttcctcagttttaggggcattgacactcgg 152  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  8105 ttcacttaccaagtgttcctcagttttaggggcactgacactcgg 8061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1254 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: scaffold1254
Description:

Target: scaffold1254; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 31 - 278
Target Start/End: Complemental strand, 298 - 51
Alignment:
Q  31 actcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctatacattcacttaccaagtgttcctcag 130  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||| ||    
T  298 actcttttttcatctaatttctctcaattctcatggctatgcaatcacctccctcttcctcttcattttcatatgcattcacttaccaagtgttccttag 199  T
Q  131 ttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaa 230  Q
    ||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  198 ttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaa 99  T
Q  231 agaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 278  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||    
T  98 agaggagatgaaatcacaccatcactcctcaaggccatcgaagaatct 51  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 31 - 278
Target Start/End: Original strand, 7331 - 7578
Alignment:
Q  31 actcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctatacattcacttaccaagtgttcctcag 130  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||| ||    
T  7331 actcttttttcatctaatttctctcaattctcatggctatgcaatcacctccctcttcctcttcattttcatatgcattcacttaccaagtgttccttag 7430  T
Q  131 ttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaa 230  Q
    ||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  7431 ttttaggggcactgacactcgccacggttttaccggcaatctctacaaggctcttactgacaagggaatcaaaaccttcattgatgacaatgatcttcaa 7530  T
Q  231 agaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 278  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||    
T  7531 agaggagatgaaatcacaccatcactcctcaaggccatcgaagaatct 7578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 159; Significance: 1e-84; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 12 - 274
Target Start/End: Complemental strand, 18699787 - 18699525
Alignment:
Q  12 tcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctatacattca 111  Q
    ||||||||||||||| || |||||||||||||| | ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||    
T  18699787 tcatattctgcattctcaaactcttttttcatctagtttctctcaattctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattca 18699688  T
Q  112 cttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcat 211  Q
    ||||||||||||||||||| || ||||||| |||||||||  |||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||    
T  18699687 cttaccaagtgttcctcagcttcaggggcactgacactcgtgacggttttactggccatctctacaaagctcttactgacaagggaatccacaccttcat 18699588  T
Q  212 tgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 274  Q
    |||||||  ||| || ||||| || |||||||||| ||||||||||  ||| |||||||||||    
T  18699587 tgatgaccgtgacctgcaaagtggggatgaaatcaaaccatcactcgacaatgccattgaaga 18699525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 12 - 274
Target Start/End: Complemental strand, 18731891 - 18731629
Alignment:
Q  12 tcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctatacattca 111  Q
    ||||||||||||||| || |||||||||||||||| ||||| || ||| ||||||||||||||||||||||||| ||||||||||||||||||  |||||    
T  18731891 tcatattctgcattctcaaactcttttttcatccagtttctctcgattttcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattca 18731792  T
Q  112 cttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcat 211  Q
    ||||||||||||||||||| || ||||||| |||||||||  |||||||||||||| |||||||||  ||||||||||||||||||||||| ||||||||    
T  18731791 cttaccaagtgttcctcagcttcaggggcagtgacactcgtgacggttttactggccatctctacagagctcttactgacaagggaatccacaccttcat 18731692  T
Q  212 tgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 274  Q
    |||||||  ||| || |||||||| |||||||||| ||||||||||  ||| |||||||||||    
T  18731691 tgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaaga 18731629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 12 - 274
Target Start/End: Complemental strand, 18679954 - 18679692
Alignment:
Q  12 tcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctatacattca 111  Q
    ||||||||||||||| || |||||||||||||||| ||||| || ||| ||||||||||||||||||||||||| | ||||||||||||||||  |||||    
T  18679954 tcatattctgcattctcaaactcttttttcatccagtttctctctattttcatggctatgcaatcaccttcctcattctcttcattttcctatcgattca 18679855  T
Q  112 cttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcat 211  Q
    ||||||||||||||||||| || ||||||| |||||||||  |||||||||||||  ||||||||||||||||||||||||| |||||||| ||||||||    
T  18679854 cttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactggtcatctctacaaggctcttactgacaaaggaatccacaccttcat 18679755  T
Q  212 tgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 274  Q
    |||||||  ||| || |||||||| |||||||||| ||||||||||  ||| |||||||||||    
T  18679754 tgatgaccgtgacctgcaaagaggggatgaaatcaaaccatcactcgacaatgccattgaaga 18679692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 12 - 274
Target Start/End: Complemental strand, 18655864 - 18655602
Alignment:
Q  12 tcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctatacattca 111  Q
    ||||||||||||||| || |||||||||||||||| ||||| |||||| ||||||||| ||||||||||||||| ||||||||||||||||||  |||||    
T  18655864 tcatattctgcattctcaaactcttttttcatccagtttctctcaattttcatggctaggcaatcaccttcctcatcctcttcattttcctatcgattca 18655765  T
Q  112 cttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcat 211  Q
    ||||||||||||||||||| || ||||||| |||||||||  |||||||||||||  |||||||||| ||||||||||||||||||||||| ||||||||    
T  18655764 cttaccaagtgttcctcagcttcaggggcagtgacactcgtaacggttttactgggcatctctacaaagctcttactgacaagggaatccacaccttcat 18655665  T
Q  212 tgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 274  Q
    |||||||  ||| || ||||| || |||||||||| ||||||||||  ||| |||||| ||||    
T  18655664 tgatgaccgtgagctgcaaagtggggatgaaatcaaaccatcactcgacaatgccattcaaga 18655602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 54 - 274
Target Start/End: Complemental strand, 18724430 - 18724210
Alignment:
Q  54 tcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctatacattcacttaccaagtgttcctcagttttaggggcattgacactcggc 153  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||| || ||||||| |||||||||      
T  18724430 tcaattctcatggctatgcaatcaccttcctcatcctcttcattttcctatcgattcacttaccaagtgttcctcagcttcaggggcagtgacactcgta 18724331  T
Q  154 acggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatc 253  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||  ||| || |||||||| |||||||||| ||||||    
T  18724330 acggttttactggtcatctctacaaggctcttactgacaagggaatccacaccttcattgatgaccgtgacctgcaaagaggggatgaaatcaaaccatc 18724231  T
Q  254 actcatcaaggccattgaaga 274  Q
    ||||  ||| |||||||||||    
T  18724230 actcgacaatgccattgaaga 18724210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 8 - 223
Target Start/End: Complemental strand, 17989439 - 17989226
Alignment:
Q  8 tcattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctataca 107  Q
    ||||||||||||||||||| || |||||| |  ||||  |||||| |||||||||||||| ||||||| ||||| || ||||||||||||||||||| ||    
T  17989439 tcattcatattctgcattctcaaactcttct--catcttatttctctcaattctcatggccatgcaattacctttctattcctcttcattttcctatgca 17989342  T
Q  108 ttcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccatacct 207  Q
    |||| |||| | |||||||||| || || |||||  ||||||||| ||||||| || ||||||||||  |||||||||| |||||||||||| | |||||    
T  17989341 ttcagttacgatgtgttcctcatttgtaagggcaccgacactcggtacggtttcaccggcaatctcttgaaggctcttattgacaagggaattcgtacct 17989242  T
Q  208 tcattgatgacaatga 223  Q
    ||  ||||||| ||||    
T  17989241 tccatgatgacgatga 17989226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 8 - 223
Target Start/End: Original strand, 18073550 - 18073763
Alignment:
Q  8 tcattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctataca 107  Q
    ||||||||||||||||||| || |||||| |  ||||  |||||| |||||||||||||| ||||||| ||||| || ||||||||||||||||||| ||    
T  18073550 tcattcatattctgcattctcaaactcttct--catcttatttctctcaattctcatggccatgcaattacctttctattcctcttcattttcctatgca 18073647  T
Q  108 ttcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccatacct 207  Q
    |||| |||| | |||||||||| || || |||||  ||||||||| ||||||| || ||||||||||  |||||||||| |||||||||||| | |||||    
T  18073648 ttcagttacgatgtgttcctcatttgtaagggcaccgacactcggtacggtttcaccggcaatctcttgaaggctcttattgacaagggaattcgtacct 18073747  T
Q  208 tcattgatgacaatga 223  Q
    ||  ||||||| ||||    
T  18073748 tccatgatgacgatga 18073763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 129 - 278
Target Start/End: Complemental strand, 5091237 - 5091088
Alignment:
Q  129 agttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttc 228  Q
    |||||||| ||||  ||||||||  ||||||||||||| ||||||||  | |||||   || ||||||||| || ||||||||||||||||  || ||||    
T  5091237 agttttagaggcaccgacactcgttacggttttactggaaatctctatgaagctctacgtgtcaagggaattcacaccttcattgatgacagagagcttc 5091138  T
Q  229 aaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 278  Q
    |  |||||||  |||| ||||| |||||  ||||||||||| ||||||||    
T  5091137 agcgaggagaccaaataacaccgtcacttctcaaggccattcaagaatct 5091088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 121; Significance: 5e-62; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 26 - 278
Target Start/End: Complemental strand, 28164735 - 28164483
Alignment:
Q  26 cccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctatacattcacttaccaagtgttc 125  Q
    |||| |||||||| ||||||||||||| ||||||||||||||||| | ||| | |||||||||||||||| ||||||||  |||||| ||||||||||||    
T  28164735 cccaaactcttttctcatccaatttctgtcaattctcatggctatacgatcgcattcctcttcctcttcaatttcctatggattcacataccaagtgttc 28164636  T
Q  126 ctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatc 225  Q
    |||||||||||||||| |||||||||  ||||||| |||||| ||||||| ||||| |||   ||||||||||| || || |||||||||||   |||||    
T  28164635 ctcagttttaggggcagtgacactcgtgacggtttcactggccatctctataaggcccttgacgacaagggaattcacacattcattgatgattgtgatc 28164536  T
Q  226 ttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 278  Q
    || | |||||||| ||||||||||| ||| ||||||||||||||||| |||||    
T  28164535 ttgagagaggagaagaaatcacaccgtcattcatcaaggccattgaaaaatct 28164483  T

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Target: chr1; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 46 - 274
Target Start/End: Complemental strand, 268711 - 268482
Alignment:
Q  46 aatttctt-tcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctatacattcacttaccaagtgttcctcagttttaggggcattg 144  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||| | || |||  |||  | ||||| || |||||||  || || |||  ||    
T  268711 aatttcttctcagttctcatggctatgcaatcaccttcctcttcctcttcaatctcatatggatttgcctaccaggtcttcctcaacttcagaggcggtg 268612  T
Q  145 acactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaat 244  Q
    |||||||  | ||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||||   ||| ||||||||||| ||||||||    
T  268611 acactcgtgagggttttattggccatctctacaaggctcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggatgaaat 268512  T
Q  245 cacaccatcactcatcaaggccattgaaga 274  Q
    || ||||||||||  ||| |||||||||||    
T  268511 caaaccatcactcgacaatgccattgaaga 268482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 31 - 278
Target Start/End: Complemental strand, 28128042 - 28127800
Alignment:
Q  31 actcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctatacattcacttaccaagtgttcctcag 130  Q
    |||||||| ||||||||||| | ||||||||||||||||||||||||| |||||||||      | ||||||||  |||||| |||||||||||||||||    
T  28128042 actcttttctcatccaatttttgtcaattctcatggctatgcaatcacattcctcttc------aatttcctatggattcacataccaagtgttcctcag 28127949  T
Q  131 ttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaa 230  Q
     || ||||||| |||||||||  ||||||| |||||| ||||||||||||| |||  ||||||||||||||| || |||||||||||   | ||||| |     
T  28127948 cttcaggggcagtgacactcgtgacggtttcactggccatctctacaaggccctttatgacaagggaatccacacattcattgatgattgtaatcttgag 28127849  T
Q  231 agaggag-atgaaatcacaccatcactcatcaaggccattgaagaatct 278  Q
    ||||||| |  |||||||||| |||||  | ||||||||||||||||||    
T  28127848 agaggagaaaaaaatcacaccgtcacttttaaaggccattgaagaatct 28127800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 100; Significance: 2e-49; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 59 - 274
Target Start/End: Complemental strand, 29274123 - 29273908
Alignment:
Q  59 tctcatggctatgcaatcaccttcctcttcctcttcattttcctatacattcacttaccaagtgttcctcagttttaggggcattgacactcggcacggt 158  Q
    ||||||||||||||||||||||||||||||||||||| | || |||  |||||||||||| || |||||||  ||||| |||  |||||||||  |||||    
T  29274123 tctcatggctatgcaatcaccttcctcttcctcttcaatctcatatggattcacttaccaggtcttcctcaactttagaggcggtgacactcgtgacggt 29274024  T
Q  159 tttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactca 258  Q
    |||| |||| ||||||||||| |||||||||||||||||||||| ||||||||||||||   ||| ||||||||||| |||||||||| | ||||||||     
T  29274023 tttattggccatctctacaagactcttactgacaagggaatccacaccttcattgatgatcgtgaacttcaaagaggggatgaaatcaaatcatcactcg 29273924  T
Q  259 tcaaggccattgaaga 274  Q
     ||| | |||||||||    
T  29273923 acaatgtcattgaaga 29273908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 256
Target Start/End: Original strand, 31903733 - 31903882
Alignment:
Q  107 attcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccatacc 206  Q
    |||||| ||| | ||||||||||| ||||| ||| | ||||||||  | ||||||||||| ||||||||||| ||||||  ||| ||||||||||| |||    
T  31903733 attcacctacgatgtgttcctcagctttagaggcttagacactcgctatggttttactggaaatctctacaaagctctttatgataagggaatccacacc 31903832  T
Q  207 ttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcact 256  Q
    || ||||| ||  | || |||||||||||| |||||||||||||||||||    
T  31903833 tttattgacgatgaagaacttcaaagaggacatgaaatcacaccatcact 31903882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 8 - 223
Target Start/End: Original strand, 59358 - 59571
Alignment:
Q  8 tcattcatattctgcattcccagactcttttttcatccaatttctttcaattctcatggctatgcaatcaccttcctcttcctcttcattttcctataca 107  Q
    ||||||||||||||||||| || |||||| |  ||||  |||||| |||||||||||||| ||||||| ||||| || ||||||||||||||||||| ||    
T  59358 tcattcatattctgcattctcaaactcttct--catcttatttctctcaattctcatggccatgcaattacctttctattcctcttcattttcctatgca 59455  T
Q  108 ttcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccatacct 207  Q
    |||| |||| | |||||||||| || || |||||  ||||||||| ||||||| || ||||||||||  |||||||||| |||||||||||| | |||||    
T  59456 ttcagttacgatgtgttcctcatttgtaagggcaccgacactcggtacggtttcaccggcaatctcttgaaggctcttattgacaagggaattcgtacct 59555  T
Q  208 tcattgatgacaatga 223  Q
    ||  ||||||| ||||    
T  59556 tccatgatgacgatga 59571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 59; Significance: 5e-25; HSPs: 4)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 120 - 274
Target Start/End: Original strand, 34620 - 34774
Alignment:
Q  120 gtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgaca 219  Q
    |||||||| |||||||| || | |||||||||  | |||||||| |  |||||||| |  ||||||  | ||||||||||||| ||||||||||||||||    
T  34620 gtgttccttagttttagaggtagtgacactcgctatggttttaccgaaaatctctatagagctctttgtcacaagggaatccacaccttcattgatgaca 34719  T
Q  220 atgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 274  Q
      || |||||| ||||||||||||| |||||||||||  ||||||||||||||||    
T  34720 gggagcttcaaggaggagatgaaataacaccatcacttttcaaggccattgaaga 34774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 87 - 274
Target Start/End: Original strand, 116658 - 116845
Alignment:
Q  87 tcctcttcattttcctatacattcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctctta 186  Q
    |||||||| |||||||||  |||||| ||  | |||||||| |||||||| || | |||||||||  | ||||||||||| ||||||||||| | ||||     
T  116658 tcctcttccttttcctatggattcacctatgacgtgttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatcttt 116757  T
Q  187 ctgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 274  Q
     |   ||| |||| | |||||||||||||||||| || |||||| |||| || ||||| ||||| |||||  ||||||||||||||||    
T  116758 gtaggaagagaattcgtaccttcattgatgacaaagaccttcaacgaggtgacgaaataacaccgtcacttttcaaggccattgaaga 116845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 120 - 278
Target Start/End: Original strand, 27343 - 27501
Alignment:
Q  120 gtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgaca 219  Q
    |||||||| |||||||| || |||||||||||  | ||||||||||| ||||||||||  | ||||  | | |||||||| || || ||| ||||||| |    
T  27343 gtgttccttagttttagaggtattgacactcgttatggttttactggaaatctctacagtgatctttgtaagaagggaattcacacattctttgatgata 27442  T
Q  220 atgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaagaatct 278  Q
      || |||||| |||| |||||||| ||| |||||||  |||||| |||||||||||||    
T  27443 gagagcttcaaggaggtgatgaaataacatcatcacttttcaaggtcattgaagaatct 27501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 274
Target Start/End: Original strand, 42864 - 43015
Alignment:
Q  123 ttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatg 222  Q
    ||||| |||||||| || | |||||||||  | ||||||||||| ||||||||||| | ||||  | | |||||||| |  ||||||||||||||||  |    
T  42864 ttccttagttttagaggtagtgacactcgttatggttttactggaaatctctacaaagatctttgtaagaagggaattcgcaccttcattgatgacagag 42963  T
Q  223 atcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 274  Q
    | |||| | |||| ||  |||| |||||||||||  ||||||||||||||||    
T  42964 aacttccaggaggtgacaaaataacaccatcacttttcaaggccattgaaga 43015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 87 - 274
Target Start/End: Complemental strand, 58607 - 58420
Alignment:
Q  87 tcctcttcattttcctatacattcacttaccaagtgttcctcagttttaggggcattgacactcggcacggttttactggcaatctctacaaggctctta 186  Q
    |||||||| || ||||||  |||||| || || |||||||| || ||||| ||   |||||||||  | ||||||||||| ||||||||||  ||||||     
T  58607 tcctcttccttctcctatggattcacctatcacgtgttccttagctttagaggttgtgacactcgctatggttttactggaaatctctacagagctcttt 58508  T
Q  187 ctgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggccattgaaga 274  Q
     ||||||||||||||  |||||||| |||||||  || |||||| |||| || ||||| |||||||||||  ||||||||||| ||||    
T  58507 gtgacaagggaatccgaaccttcatggatgacagagagcttcaaggaggtgacgaaataacaccatcacttttcaaggccattaaaga 58420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 158 - 274
Target Start/End: Original strand, 16688944 - 16689060
Alignment:
Q  158 ttttactggcaatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactc 257  Q
    ||||||||| ||||| ||||| |||||   |||||||||||||| |  ||||||||||||||| || ||||| ||||| ||  ||||||||||||||||     
T  16688944 ttttactggtaatctgtacaaagctctatgtgacaagggaatccgtgtcttcattgatgacaaggaacttcagagaggtgacaaaatcacaccatcactt 16689043  T
Q  258 atcaaggccattgaaga 274  Q
    |||||||| ||||||||    
T  16689044 atcaaggcaattgaaga 16689060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 168 - 274
Target Start/End: Complemental strand, 17993928 - 17993822
Alignment:
Q  168 aatctctacaaggctcttactgacaagggaatccataccttcattgatgacaatgatcttcaaagaggagatgaaatcacaccatcactcatcaaggcca 267  Q
    |||||||| || |||||| ||||||||||||| |  |||||||| |||||||| || ||||| ||||| |||||||||||||| || ||| |||||  ||    
T  17993928 aatctctataaagctctttctgacaagggaattcgaaccttcatcgatgacaaagagcttcagagaggtgatgaaatcacaccgtcgctcctcaagagca 17993829  T
Q  268 ttgaaga 274  Q
    |||||||    
T  17993828 ttgaaga 17993822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0713 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0713
Description:

Target: scaffold0713; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 129
Target Start/End: Original strand, 5916 - 5982
Alignment:
Q  63 atggctatgcaatcaccttcctcttcctcttcattttcctatacattcacttaccaagtgttcctca 129  Q
    |||| ||| ||||||||||||||| |||| || |||||||||  | |||| ||||||||||||||||    
T  5916 atggttattcaatcaccttcctctacctcatccttttcctatggactcacataccaagtgttcctca 5982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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