View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10278_low_8 (Length: 259)

Name: NF10278_low_8
Description: NF10278
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10278_low_8
NF10278_low_8
[»] scaffold0023 (2 HSPs)
scaffold0023 (8-251)||(61035-61277)
scaffold0023 (134-207)||(48904-48977)
[»] chr4 (31 HSPs)
chr4 (8-251)||(16523023-16523265)
chr4 (8-251)||(8045149-8045391)
chr4 (7-251)||(14500025-14500268)
chr4 (8-251)||(32460516-32460758)
chr4 (134-251)||(9795534-9795652)
chr4 (148-251)||(19020808-19020912)
chr4 (107-226)||(19697217-19697336)
chr4 (107-226)||(19707802-19707921)
chr4 (134-234)||(22738577-22738678)
chr4 (135-233)||(18248527-18248626)
chr4 (8-62)||(9295899-9295953)
chr4 (133-207)||(55376452-55376526)
chr4 (134-207)||(15135865-15135938)
chr4 (134-207)||(15272169-15272242)
chr4 (134-207)||(15674967-15675040)
chr4 (8-48)||(9795421-9795461)
chr4 (134-206)||(40885418-40885490)
chr4 (2-64)||(14951960-14952022)
chr4 (134-207)||(10104128-10104201)
chr4 (134-207)||(13246738-13246811)
chr4 (134-233)||(8378494-8378594)
chr4 (8-44)||(14996332-14996368)
chr4 (8-48)||(19697383-19697423)
chr4 (8-48)||(19707968-19708008)
chr4 (134-174)||(33241012-33241052)
chr4 (136-207)||(31132628-31132699)
chr4 (2-64)||(5682522-5682584)
chr4 (2-64)||(15272307-15272369)
chr4 (134-166)||(14952086-14952118)
chr4 (134-166)||(16609012-16609044)
chr4 (134-166)||(26680518-26680550)
[»] chr3 (37 HSPs)
chr3 (8-251)||(16933782-16934024)
chr3 (8-251)||(14285166-14285408)
chr3 (8-251)||(19946903-19947146)
chr3 (148-251)||(15938307-15938411)
chr3 (134-251)||(12901920-12902038)
chr3 (148-251)||(15936465-15936569)
chr3 (170-251)||(9302955-9303036)
chr3 (107-251)||(11477008-11477153)
chr3 (134-207)||(11986038-11986111)
chr3 (134-207)||(16261778-16261851)
chr3 (134-207)||(53771366-53771439)
chr3 (8-48)||(8268755-8268795)
chr3 (8-48)||(8275855-8275895)
chr3 (8-48)||(9303110-9303150)
chr3 (8-48)||(11477201-11477241)
chr3 (134-206)||(51960990-51961062)
chr3 (2-64)||(7854180-7854242)
chr3 (2-64)||(18970119-18970181)
chr3 (2-64)||(30153140-30153202)
chr3 (2-64)||(54685296-54685358)
chr3 (134-207)||(2050116-2050189)
chr3 (134-207)||(38168238-38168311)
chr3 (3-64)||(45581830-45581891)
chr3 (3-64)||(48421776-48421837)
chr3 (2-64)||(16261651-16261713)
chr3 (2-64)||(33342079-33342141)
chr3 (2-64)||(53771239-53771301)
chr3 (2-64)||(55513068-55513130)
chr3 (3-64)||(15550797-15550858)
chr3 (134-207)||(33342205-33342278)
chr3 (134-207)||(54651765-54651838)
chr3 (134-166)||(2449151-2449183)
chr3 (134-166)||(13839201-13839233)
chr3 (134-166)||(14842486-14842518)
chr3 (134-166)||(17912397-17912429)
chr3 (134-166)||(19260748-19260780)
chr3 (134-166)||(23492697-23492729)
[»] chr8 (24 HSPs)
chr8 (8-252)||(22886531-22886775)
chr8 (8-251)||(3431088-3431331)
chr8 (8-251)||(21494269-21494511)
chr8 (112-251)||(16038700-16038839)
chr8 (107-251)||(2545239-2545384)
chr8 (134-251)||(22147757-22147875)
chr8 (107-251)||(18612698-18612843)
chr8 (134-207)||(24385610-24385683)
chr8 (134-207)||(43373350-43373423)
chr8 (8-48)||(18612611-18612651)
chr8 (8-48)||(18619516-18619556)
chr8 (8-48)||(22147643-22147683)
chr8 (2-64)||(22321441-22321503)
chr8 (3-64)||(17502360-17502421)
chr8 (8-48)||(16038892-16038932)
chr8 (2-64)||(24385747-24385809)
chr8 (2-64)||(41506804-41506866)
chr8 (3-64)||(4234054-4234115)
chr8 (3-64)||(21259486-21259547)
chr8 (8-48)||(2545151-2545191)
chr8 (134-166)||(5238405-5238437)
chr8 (134-166)||(22907127-22907159)
chr8 (134-166)||(24661161-24661193)
chr8 (134-166)||(43685864-43685896)
[»] chr6 (29 HSPs)
chr6 (10-251)||(18839051-18839291)
chr6 (8-251)||(18823196-18823438)
chr6 (8-253)||(32276570-32276814)
chr6 (134-247)||(13620627-13620742)
chr6 (134-251)||(19629649-19629766)
chr6 (107-251)||(16299799-16299943)
chr6 (135-251)||(15742032-15742150)
chr6 (134-251)||(18002307-18002426)
chr6 (134-207)||(26090060-26090133)
chr6 (134-207)||(23148304-23148377)
chr6 (134-207)||(23153755-23153828)
chr6 (134-207)||(23995248-23995321)
chr6 (134-207)||(27751743-27751816)
chr6 (134-203)||(35009314-35009383)
chr6 (2-64)||(26089933-26089995)
chr6 (2-64)||(35015152-35015214)
chr6 (3-64)||(15889701-15889762)
chr6 (3-64)||(22585541-22585602)
chr6 (3-64)||(22590372-22590433)
chr6 (8-48)||(16299991-16300031)
chr6 (8-48)||(19629535-19629575)
chr6 (2-61)||(19983290-19983349)
chr6 (2-64)||(15004902-15004963)
chr6 (2-64)||(18002491-18002553)
chr6 (2-64)||(18583515-18583577)
chr6 (3-64)||(15742214-15742275)
chr6 (134-207)||(29666182-29666255)
chr6 (134-166)||(1657660-1657692)
chr6 (134-166)||(15862790-15862822)
[»] scaffold0173 (1 HSPs)
scaffold0173 (8-251)||(5426-5668)
[»] chr5 (24 HSPs)
chr5 (8-251)||(9730190-9730433)
chr5 (8-251)||(7529105-7529347)
chr5 (8-207)||(108686-108883)
chr5 (134-251)||(17909824-17909942)
chr5 (134-251)||(34939596-34939714)
chr5 (134-206)||(25005138-25005210)
chr5 (3-64)||(22662670-22662731)
chr5 (134-207)||(23507271-23507344)
chr5 (134-207)||(27182429-27182502)
chr5 (8-48)||(17909710-17909750)
chr5 (135-207)||(18530946-18531018)
chr5 (2-64)||(2032008-2032070)
chr5 (2-64)||(11342883-11342945)
chr5 (2-64)||(21650893-21650955)
chr5 (137-207)||(32951016-32951086)
chr5 (134-207)||(22053711-22053784)
chr5 (2-64)||(21205124-21205186)
chr5 (134-207)||(23981363-23981436)
chr5 (135-207)||(2032135-2032207)
chr5 (134-166)||(16105968-16106000)
chr5 (134-166)||(20623287-20623319)
chr5 (134-166)||(21233441-21233473)
chr5 (134-166)||(25900319-25900351)
chr5 (134-166)||(37053062-37053094)
[»] chr7 (30 HSPs)
chr7 (8-251)||(371294-371537)
chr7 (148-251)||(18253672-18253777)
chr7 (134-251)||(15862227-15862345)
chr7 (134-234)||(47480875-47480975)
chr7 (134-207)||(13321335-13321408)
chr7 (134-207)||(25124451-25124524)
chr7 (134-207)||(2029245-2029318)
chr7 (134-226)||(10000225-10000318)
chr7 (134-207)||(36052972-36053045)
chr7 (134-207)||(42056146-42056219)
chr7 (134-207)||(11580619-11580692)
chr7 (134-207)||(16212072-16212145)
chr7 (134-226)||(48622521-48622614)
chr7 (134-233)||(16418805-16418905)
chr7 (2-64)||(111264-111326)
chr7 (2-64)||(126613-126675)
chr7 (2-64)||(1937012-1937074)
chr7 (2-64)||(2029119-2029181)
chr7 (2-64)||(32494041-32494103)
chr7 (2-64)||(42056284-42056346)
chr7 (2-63)||(2190182-2190243)
chr7 (134-207)||(13036896-13036969)
chr7 (134-207)||(15709470-15709543)
chr7 (134-166)||(7293334-7293366)
chr7 (134-166)||(11516545-11516577)
chr7 (134-166)||(14113902-14113934)
chr7 (134-166)||(15441477-15441509)
chr7 (6-54)||(17984753-17984801)
chr7 (134-166)||(30262042-30262074)
chr7 (3-55)||(39291513-39291565)
[»] chr2 (23 HSPs)
chr2 (8-251)||(28031047-28031289)
chr2 (8-251)||(33128249-33128492)
chr2 (8-251)||(17204536-17204779)
chr2 (134-251)||(7507670-7507788)
chr2 (134-247)||(23777879-23777993)
chr2 (8-164)||(24826615-24826769)
chr2 (8-64)||(15633418-15633474)
chr2 (134-207)||(25265261-25265334)
chr2 (134-233)||(5888478-5888578)
chr2 (134-233)||(21142203-21142303)
chr2 (134-207)||(463044-463117)
chr2 (134-207)||(24341267-24341340)
chr2 (2-64)||(9652891-9652953)
chr2 (188-251)||(15633592-15633657)
chr2 (2-64)||(21274044-21274106)
chr2 (2-64)||(22274920-22274982)
chr2 (133-207)||(32466176-32466249)
chr2 (3-64)||(7321716-7321777)
chr2 (134-207)||(9652754-9652827)
chr2 (134-207)||(22863236-22863309)
chr2 (134-166)||(14906353-14906385)
chr2 (134-166)||(23820389-23820421)
chr2 (134-166)||(36982363-36982395)
[»] scaffold0615 (1 HSPs)
scaffold0615 (8-251)||(6022-6266)
[»] scaffold0207 (1 HSPs)
scaffold0207 (8-251)||(17903-18145)
[»] scaffold0335 (1 HSPs)
scaffold0335 (8-251)||(5390-5631)
[»] scaffold0032 (4 HSPs)
scaffold0032 (134-251)||(13181-13298)
scaffold0032 (134-207)||(108033-108106)
scaffold0032 (2-64)||(55779-55841)
scaffold0032 (134-207)||(55905-55978)
[»] scaffold0118 (1 HSPs)
scaffold0118 (8-251)||(34221-34463)
[»] chr1 (9 HSPs)
chr1 (107-251)||(20254605-20254749)
chr1 (8-122)||(21649977-21650090)
chr1 (134-207)||(20893509-20893582)
chr1 (2-64)||(15861421-15861483)
chr1 (8-46)||(20254518-20254556)
chr1 (2-64)||(22367216-22367278)
chr1 (134-207)||(20913336-20913409)
chr1 (134-207)||(20931651-20931724)
chr1 (134-207)||(37844332-37844405)
[»] scaffold0049 (1 HSPs)
scaffold0049 (107-251)||(48478-48623)
[»] scaffold0574 (2 HSPs)
scaffold0574 (107-251)||(9324-9470)
scaffold0574 (8-48)||(9518-9558)
[»] scaffold0367 (1 HSPs)
scaffold0367 (8-166)||(17208-17364)
[»] scaffold0026 (1 HSPs)
scaffold0026 (148-251)||(108068-108172)
[»] scaffold0125 (1 HSPs)
scaffold0125 (134-251)||(41966-42084)
[»] scaffold0075 (1 HSPs)
scaffold0075 (134-251)||(34286-34404)
[»] scaffold0029 (2 HSPs)
scaffold0029 (107-251)||(49665-49810)
scaffold0029 (8-46)||(49860-49898)
[»] scaffold0387 (1 HSPs)
scaffold0387 (134-251)||(7008-7126)
[»] scaffold0001 (4 HSPs)
scaffold0001 (107-226)||(164810-164929)
scaffold0001 (134-207)||(172211-172284)
scaffold0001 (134-207)||(177914-177987)
scaffold0001 (8-48)||(164976-165016)
[»] scaffold0303 (2 HSPs)
scaffold0303 (134-251)||(4258-4377)
scaffold0303 (2-64)||(23-85)
[»] scaffold0037 (2 HSPs)
scaffold0037 (107-251)||(95272-95418)
scaffold0037 (8-48)||(95183-95223)
[»] scaffold0361 (1 HSPs)
scaffold0361 (154-251)||(3525-3622)
[»] scaffold0066 (2 HSPs)
scaffold0066 (134-251)||(45339-45458)
scaffold0066 (134-251)||(54725-54844)
[»] scaffold0160 (1 HSPs)
scaffold0160 (133-207)||(338-412)
[»] scaffold0516 (1 HSPs)
scaffold0516 (134-226)||(11982-12075)
[»] scaffold0507 (1 HSPs)
scaffold0507 (3-64)||(1496-1557)
[»] scaffold0498 (1 HSPs)
scaffold0498 (134-207)||(9184-9257)
[»] scaffold0251 (2 HSPs)
scaffold0251 (134-207)||(13243-13316)
scaffold0251 (2-64)||(13381-13443)
[»] scaffold0162 (4 HSPs)
scaffold0162 (134-207)||(12064-12137)
scaffold0162 (8-51)||(11949-11992)
scaffold0162 (134-206)||(8051-8124)
scaffold0162 (134-207)||(26298-26371)
[»] scaffold0132 (1 HSPs)
scaffold0132 (134-199)||(13825-13890)
[»] scaffold0706 (2 HSPs)
scaffold0706 (1-64)||(6538-6601)
scaffold0706 (134-207)||(6401-6474)
[»] scaffold0009 (1 HSPs)
scaffold0009 (134-205)||(272331-272402)
[»] scaffold0465 (2 HSPs)
scaffold0465 (2-64)||(9978-10040)
scaffold0465 (134-207)||(9840-9913)
[»] scaffold0158 (1 HSPs)
scaffold0158 (133-207)||(25531-25605)
[»] scaffold1295 (1 HSPs)
scaffold1295 (3-64)||(305-366)
[»] scaffold0597 (1 HSPs)
scaffold0597 (134-207)||(836-909)
[»] scaffold0302 (1 HSPs)
scaffold0302 (134-207)||(12419-12492)
[»] scaffold0266 (2 HSPs)
scaffold0266 (134-207)||(1431-1504)
scaffold0266 (134-207)||(3466-3539)
[»] scaffold0063 (1 HSPs)
scaffold0063 (3-64)||(44109-44170)
[»] scaffold0058 (1 HSPs)
scaffold0058 (134-207)||(57350-57423)
[»] scaffold0025 (2 HSPs)
scaffold0025 (134-207)||(146907-146980)
scaffold0025 (134-207)||(9161-9234)
[»] scaffold0012 (2 HSPs)
scaffold0012 (134-207)||(247324-247397)
scaffold0012 (134-207)||(34033-34106)
[»] scaffold0011 (1 HSPs)
scaffold0011 (134-207)||(123045-123118)
[»] scaffold0004 (1 HSPs)
scaffold0004 (134-207)||(193355-193428)
[»] scaffold0003 (1 HSPs)
scaffold0003 (134-233)||(7517-7617)
[»] scaffold0215 (2 HSPs)
scaffold0215 (148-226)||(9203-9282)
scaffold0215 (148-226)||(16101-16180)
[»] scaffold0686 (1 HSPs)
scaffold0686 (2-64)||(6078-6140)
[»] scaffold0175 (2 HSPs)
scaffold0175 (2-64)||(15147-15209)
scaffold0175 (134-166)||(881-913)
[»] scaffold0008 (1 HSPs)
scaffold0008 (134-208)||(128052-128126)
[»] scaffold0039 (1 HSPs)
scaffold0039 (3-64)||(12513-12574)
[»] scaffold0017 (1 HSPs)
scaffold0017 (134-226)||(54182-54275)
[»] scaffold0413 (1 HSPs)
scaffold0413 (134-166)||(5989-6021)
[»] scaffold0141 (2 HSPs)
scaffold0141 (134-166)||(22858-22890)
scaffold0141 (134-166)||(27113-27145)
[»] scaffold0124 (1 HSPs)
scaffold0124 (134-166)||(1495-1527)
[»] scaffold0078 (1 HSPs)
scaffold0078 (134-166)||(36979-37011)
[»] scaffold0016 (2 HSPs)
scaffold0016 (4-64)||(162173-162233)
scaffold0016 (4-64)||(166259-166319)


Alignment Details
Target: scaffold0023 (Bit Score: 159; Significance: 9e-85; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 8 - 251
Target Start/End: Complemental strand, 61277 - 61035
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtttatataaattcttactcaattaagcacnnnnnnnatacaaacc 107  Q
    |||||||||| ||||||||||||||||||||||||||||||| | |||||||||||| ||| ||||||| ||||||||||||||       |||||||||    
T  61277 aattaacatactcaaacttatcaccaaaacaagagcacgaaaattaaagattgggttcatacaaattctcactcaattaagcactttttc-atacaaacc 61179  T
Q  108 aagaaaaattgcaaaacaaacatttgtgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    ||||||||||||||| |||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||    
T  61178 aagaaaaattgcaaa-caaacaattatgattatgatgaagactaacccccttaccttaggttatgatcaattcaaacttgagcttaactttagctcataa 61080  T
Q  208 ttctccaatcttcaagtttt-cccctttgctaacccttgttcttc 251  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  61079 ttctccaatcttcaagttttccccctttgctaacccttgttcttc 61035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 134 - 207
Target Start/End: Original strand, 48904 - 48977
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||||||||||| ||| |||||  ||||||  |||| ||||||||||||||    
T  48904 tgattatgataaagactaacccccttaccttaggtaatgctcaatctaaacttaggctttactttagctcctaa 48977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 159; Significance: 9e-85; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 8 - 251
Target Start/End: Original strand, 16523023 - 16523265
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtttatataaattcttactcaattaagcacnnnnnnnatacaaacc 107  Q
    |||||||||| ||||||||||||||||||||||||||||||| | | |||||||||| |||| |||||| ||||||||||||||       |||||||||    
T  16523023 aattaacatactcaaacttatcaccaaaacaagagcacgaaaattagagattgggttcatatgaattctcactcaattaagcactttttc-atacaaacc 16523121  T
Q  108 aagaaaaattgcaaaacaaacatttgtgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    ||||||||||||||| |||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  16523122 aagaaaaattgcaaa-caaacaattatgattatgatgaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcataa 16523220  T
Q  208 ttctccaatcttcaagtttt-cccctttgctaacccttgttcttc 251  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  16523221 ttctccaatcttcaagttttccccctttgctaacccttgttcttc 16523265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 8 - 251
Target Start/End: Original strand, 8045149 - 8045391
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtttatataaattcttactcaattaagcacnnnnnnnatacaaacc 107  Q
    |||||||||| ||||||||||||||||||||||||||||||| | | |||||||||| ||||||||||| ||| ||||||||||       |||||||||    
T  8045149 aattaacatactcaaacttatcaccaaaacaagagcacgaaaattagagattgggttcatataaattctcacttaattaagcactttttc-atacaaacc 8045247  T
Q  108 aagaaaaattgcaaaacaaacatttgtgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    ||||||||||||||| |||||| || |||||||||| |||||||||||||||||||||||||||||| |||||||||||   ||||||||||||||||||    
T  8045248 aagaaaaattgcaaa-caaacaattatgattatgatgaagactaacccccttaccttaggttatgattaattcaaacttagacttcactttagctcctaa 8045346  T
Q  208 ttctccaatcttcaagttt-tcccctttgctaacccttgttcttc 251  Q
    |||| |||||||||||||| |||| ||  ||||||||||||||||    
T  8045347 ttcttcaatcttcaagtttctccctttctctaacccttgttcttc 8045391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 7 - 251
Target Start/End: Complemental strand, 14500268 - 14500025
Alignment:
Q  7 aaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtttatataaattcttactcaattaagcacnnnnnnnatacaaac 106  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||  ||||||       ||||||||    
T  14500268 aaattaacatactcaaacttatcaccaaaacaagagcacgaaattcaaagattgggttcatataaatacttactcaaacaagcactttttc-atacaaac 14500170  T
Q  107 caagaaaaattgcaaaacaaacatttgtgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctccta 206  Q
     ||||||| ||||||   ||||| || |||||||||| ||| |||||||||||||||||| | ||||| ||| ||||||| |||||||||||||||| ||    
T  14500169 aaagaaaa-ttgcaagcaaaacaattatgattatgatgaagcctaacccccttaccttagataatgattaatccaaacttaagcttcactttagctcata 14500071  T
Q  207 attctccaatcttcaagttttccccttt-gctaacccttgttcttc 251  Q
    ||||| |||||||||||||| |||||||  ||||||||||||||||    
T  14500070 attcttcaatcttcaagtttccccctttctctaacccttgttcttc 14500025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 8 - 251
Target Start/End: Complemental strand, 32460758 - 32460516
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtttatataaattcttactcaattaagcacnnnnnnnatacaaacc 107  Q
    |||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||       |||||| ||    
T  32460758 aattaacatactcaaaattataaccaaaacaagagcacgaaattcaaagattgggttcatataaatacttactcaattaagcactatttc-atacaatcc 32460660  T
Q  108 aagaaaaattgcaaaacaaacatttgtgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    ||||||| |||||||  ||||| |  |||||||||  |||||||||||||||||||||| | ||||| ||| |||||||  |||||||||||||||||||    
T  32460659 aagaaaa-ttgcaaacaaaacaatcatgattatgaagaagactaacccccttaccttagataatgattaatccaaacttaggcttcactttagctcctaa 32460561  T
Q  208 ttctccaatcttcaagttttccccttt-gctaacccttgttcttc 251  Q
    |||| |||||||||||||| |||||||  ||||||||||||||||    
T  32460560 ttcttcaatcttcaagtttccccctttctctaacccttgttcttc 32460516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 134 - 251
Target Start/End: Original strand, 9795534 - 9795652
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagtttt-cccct 232  Q
    |||||||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  9795534 tgattatgatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttttccccct 9795633  T
Q  233 ttgctaacccttgttcttc 251  Q
    |||||||||||||||||||    
T  9795634 ttgctaacccttgttcttc 9795652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 148 - 251
Target Start/End: Original strand, 19020808 - 19020912
Alignment:
Q  148 actaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttttcccc-tttgctaacccttgt 246  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  19020808 actaacccccttaccttaggttatgatcaattcaaacttgagcttcaccttagctcctaattctccaatcttcaagtttcccccttttgctaacccttgt 19020907  T
Q  247 tcttc 251  Q
    |||||    
T  19020908 tcttc 19020912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 107 - 226
Target Start/End: Complemental strand, 19697336 - 19697217
Alignment:
Q  107 caagaaaaattgcaaaacaaacatttgtgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctccta 206  Q
    |||| |||||||||||  ||||| |  |||||||||  || ||||||||||||||||||||||||||| |||||| ||||  ||||||||||| ||||||    
T  19697336 caaggaaaattgcaaacaaaacaatcatgattatgaagaacactaacccccttaccttaggttatgattaattcacacttaggcttcactttacctccta 19697237  T
Q  207 attctccaatcttcaagttt 226  Q
    ||||| ||||||||||||||    
T  19697236 attcttcaatcttcaagttt 19697217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 107 - 226
Target Start/End: Complemental strand, 19707921 - 19707802
Alignment:
Q  107 caagaaaaattgcaaaacaaacatttgtgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctccta 206  Q
    |||| |||||||||||  ||||| |  |||||||||  || ||||||||||||||||||||||||||| |||||| ||||  ||||||||||| ||||||    
T  19707921 caaggaaaattgcaaacaaaacaatcatgattatgaagaacactaacccccttaccttaggttatgattaattcacacttaggcttcactttacctccta 19707822  T
Q  207 attctccaatcttcaagttt 226  Q
    ||||| ||||||||||||||    
T  19707821 attcttcaatcttcaagttt 19707802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 134 - 234
Target Start/End: Original strand, 22738577 - 22738678
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaatt-ctccaatcttcaagttttcccct 232  Q
    |||||||||| ||||| |||||||||||||||| | ||| | |||   |||||  ||||||||||||||||||||| || |||||||||||||| |||||    
T  22738577 tgattatgatgaagacaaacccccttaccttagatgatgtttaatcttaacttaggcttcactttagctcctaattgcttcaatcttcaagtttccccct 22738676  T
Q  233 tt 234  Q
    ||    
T  22738677 tt 22738678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 233
Target Start/End: Original strand, 18248527 - 18248626
Alignment:
Q  135 gattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaatt-ctccaatcttcaagttttcccctt 233  Q
    ||||||||| |  ||||||||||||||||||| | ||||| |||   ||||| |||||||||||| ||||||||| || |||||||||||||| ||||||    
T  18248527 gattatgataataactaacccccttaccttagatgatgattaatcttaacttaagcttcactttaactcctaattgcttcaatcttcaagtttccccctt 18248626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 9295899 - 9295953
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattggg 62  Q
    |||||||||| ||||||||||||||||||||||||||||||| | | ||||||||    
T  9295899 aattaacatactcaaacttatcaccaaaacaagagcacgaaaattagagattggg 9295953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 207
Target Start/End: Complemental strand, 55376526 - 55376452
Alignment:
Q  133 gtgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    ||||||||||| |||||||||||||||||||||| | | ||||||  |||||||  |||||| ||||||||||||    
T  55376526 gtgattatgatgaagactaacccccttaccttagataaggatcaacccaaacttaggcttcaatttagctcctaa 55376452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 15135938 - 15135865
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||||||||| | | ||| ||| | |||||  |||||||||||||||||||    
T  15135938 tgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaa 15135865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 15272242 - 15272169
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||||||||| | | ||| ||| | |||||  |||||||||||||||||||    
T  15272242 tgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaa 15272169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 15675040 - 15674967
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||||||||| ||||||| ||    |||||  |||||||||||||||||||    
T  15675040 tgattatgatgaagactaacccccttaccttagattatgattaacctcaacttaggcttcactttagctcctaa 15674967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 9795421 - 9795461
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagcacgaa 48  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  9795421 aattaacatactcaaacttatcaccaaaacaagagcacgaa 9795461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 206
Target Start/End: Complemental strand, 40885490 - 40885418
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctccta 206  Q
    |||||||||| ||  |||||||||||||||||| | ||||| ||| |||||||  ||||||||||||||||||    
T  40885490 tgattatgatgaattctaacccccttaccttagataatgattaatccaaacttaggcttcactttagctccta 40885418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 14951960 - 14952022
Alignment:
Q  2 acatcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    ||||||||||||||||||||||| |||| | | ||||  |||||||| |||||||||||||||    
T  14951960 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggtt 14952022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 10104201 - 10104128
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||||||||| ||||||| ||    |||||  |||| ||||||||||||||    
T  10104201 tgattatgatgaagactaacccccttaccttagattatgattaacctcaacttaggctttactttagctcctaa 10104128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 207
Target Start/End: Original strand, 13246738 - 13246811
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||||||||| | | ||| ||| | |||||  |||||| ||||||||||||    
T  13246738 tgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaa 13246811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 233
Target Start/End: Original strand, 8378494 - 8378594
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaatt-ctccaatcttcaagttttcccct 232  Q
    |||||||||| |  ||||| ||||||||||||| | ||| | |||   ||||| |||||||||||| ||||||||| || |||||||||||||| |||||    
T  8378494 tgattatgataataactaatccccttaccttagatgatgtttaatcttaacttaagcttcactttaactcctaattgcttcaatcttcaagtttccccct 8378593  T
Q  233 t 233  Q
    |    
T  8378594 t 8378594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 14996332 - 14996368
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagca 44  Q
    |||||||||| ||||||||||||||||||||||||||    
T  14996332 aattaacatactcaaacttatcaccaaaacaagagca 14996368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 19697423 - 19697383
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagcacgaa 48  Q
    |||||||||| ||||| ||||||||||||||||||||||||    
T  19697423 aattaacatactcaaaattatcaccaaaacaagagcacgaa 19697383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 19708008 - 19707968
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagcacgaa 48  Q
    |||||||||| ||||| ||||||||||||||||||||||||    
T  19708008 aattaacatactcaaaattatcaccaaaacaagagcacgaa 19707968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 174
Target Start/End: Original strand, 33241012 - 33241052
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgat 174  Q
    |||||||||| |||||||||||||||||||||| |||||||    
T  33241012 tgattatgatgaagactaacccccttaccttagattatgat 33241052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 207
Target Start/End: Original strand, 31132628 - 31132699
Alignment:
Q  136 attatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||| |||||||||||||||||||||| ||||||| ||    |||||  ||| |||||||||||||||    
T  31132628 attatgatgaagactaacccccttaccttagattatgattaacctcaacttaggctccactttagctcctaa 31132699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 5682584 - 5682522
Alignment:
Q  2 acatcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    ||||||||||||||||||||||| |||| | |  |||  |||||||| |||||||||||||||    
T  5682584 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggtt 5682522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 15272369 - 15272307
Alignment:
Q  2 acatcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    ||||||||||||||||| ||||| |||| | | ||||  |||||||| |||||||||||||||    
T  15272369 acatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgggtt 15272307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 14952086 - 14952118
Alignment:
Q  134 tgattatgattaagactaacccccttaccttag 166  Q
    |||||||||| ||||||||||||||||||||||    
T  14952086 tgattatgataaagactaacccccttaccttag 14952118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 16609044 - 16609012
Alignment:
Q  134 tgattatgattaagactaacccccttaccttag 166  Q
    |||||||||| ||||||||||||||||||||||    
T  16609044 tgattatgataaagactaacccccttaccttag 16609012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 26680518 - 26680550
Alignment:
Q  134 tgattatgattaagactaacccccttaccttag 166  Q
    |||||||||| ||||||||||||||||||||||    
T  26680518 tgattatgataaagactaacccccttaccttag 26680550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 143; Significance: 3e-75; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 8 - 251
Target Start/End: Complemental strand, 16934024 - 16933782
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtttatataaattcttactcaattaagcacnnnnnnnatacaaacc 107  Q
    |||||||||| |||| ||||||| |||||||||||||||||| | | |||||||||| |||| |||||| ||| ||||||||||       |||||||||    
T  16934024 aattaacatactcaatcttatcatcaaaacaagagcacgaaaattagagattgggttcatatgaattctcacttaattaagcactttttc-atacaaacc 16933926  T
Q  108 aagaaaaattgcaaaacaaacatttgtgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    ||||||||||||||| | |||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16933925 aagaaaaattgcaaa-ctaacaattatgattatgataaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 16933827  T
Q  208 ttctccaatcttcaagttttccccttt-gctaacccttgttcttc 251  Q
    |||||||||||||||||||||||||||  ||||||||||||||||    
T  16933826 ttctccaatcttcaagttttcccctttctctaacccttgttcttc 16933782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 8 - 251
Target Start/End: Original strand, 14285166 - 14285408
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtttatataaattcttactcaattaagcacnnnnnnnatacaaacc 107  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| | ||||||| |||||||| |||||||||||||||||       |||||||||    
T  14285166 aattaacatactcaaacttatcaccaaaacaagagcacgaaattcaagggttgggttcatataaatacttactcaattaagcactatttc-atacaaacc 14285264  T
Q  108 aagaaaaattgcaaaacaaacatttgtgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    ||||||| |||||||  ||||| || |||||||||| |||||||||||||||||||||| | ||||| ||| ||||||| ||||||||||||||||||||    
T  14285265 aagaaaa-ttgcaaacaaaacaattatgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaagcttcactttagctcctaa 14285363  T
Q  208 ttctccaatcttcaagttttccccttt-gctaacccttgttcttc 251  Q
    |||| |||||||||||||| |||||||  ||||||||||||||||    
T  14285364 ttcttcaatcttcaagtttccccctttctctaacccttgttcttc 14285408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 8 - 251
Target Start/End: Original strand, 19946903 - 19947146
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtttatataaattcttactcaattaagcacnnnnnnnatacaaacc 107  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||        | |||||||    
T  19946903 aattaacatactcaaatttatcaccaaaacaagagcacgaaattcaaagattgggttcatataaattcttactcaattaagcattttttcaa-acaaacc 19947001  T
Q  108 aagaaaaattgcaaaacaaacatttgtgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcct-a 206  Q
    ||||||| |||||||||||||| || |||||||||| |||||||||||||||||||||||||||||| ||| |||||||  ||||||||||| ||||| |    
T  19947002 aagaaaa-ttgcaaaacaaacaattatgattatgatgaagactaacccccttaccttaggttatgattaatccaaacttaggcttcactttaactcctaa 19947100  T
Q  207 attctccaatcttcaagttt-tcccctttgctaacccttgttcttc 251  Q
    || || |||||||||||||| |||| ||  ||||||||||||||||    
T  19947101 atccttcaatcttcaagtttctccctttctctaacccttgttcttc 19947146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 148 - 251
Target Start/End: Complemental strand, 15938411 - 15938307
Alignment:
Q  148 actaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagtttt-cccctttgctaacccttgt 246  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  15938411 actaacccccttaccttaggctatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttttccccctttgctaacccttgt 15938312  T
Q  247 tcttc 251  Q
    |||||    
T  15938311 tcttc 15938307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 134 - 251
Target Start/End: Complemental strand, 12902038 - 12901920
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagtttt-cccct 232  Q
    |||||||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||    
T  12902038 tgattatgatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttaactcctaattctccaatcttcaaattttccccct 12901939  T
Q  233 ttgctaacccttgttcttc 251  Q
    |||||||||||||||||||    
T  12901938 ttgctaacccttgttcttc 12901920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 148 - 251
Target Start/End: Complemental strand, 15936569 - 15936465
Alignment:
Q  148 actaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagtttt-cccctttgctaacccttgt 246  Q
    |||||||||| ||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  15936569 actaacccccataccttaggctacgatcaattcaaacttgagcttcacttttgctcctaattctccaatcttcaagttttccccctttgctaacccttgt 15936470  T
Q  247 tcttc 251  Q
    |||||    
T  15936469 tcttc 15936465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 170 - 251
Target Start/End: Complemental strand, 9303036 - 9302955
Alignment:
Q  170 atgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttttcccctttgctaacccttgttcttc 251  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  9303036 atgatcaattcaaacttgagcttcactttaactcctaattctccaatcttcaagtttccccctttgctaacccttgttcttc 9302955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 107 - 251
Target Start/End: Complemental strand, 11477153 - 11477008
Alignment:
Q  107 caagaaaaattgcaaaacaaacatttgtgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctccta 206  Q
    |||| |||||||||||  ||||| |  |||||||||  |||||||||||||||||||||||| ||||| |||||||||||  ||||||||||| ||||||    
T  11477153 caaggaaaattgcaaacaaaacaatcatgattatgaagaagactaacccccttaccttaggtaatgattaattcaaacttaggcttcactttaactccta 11477054  T
Q  207 attctccaatcttcaagttttccccttt-gctaacccttgttcttc 251  Q
    ||||| |||||||||||||| |||||||  ||||||||||||||||    
T  11477053 attcttcaatcttcaagtttccccctttctctaacccttgttcttc 11477008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 11986111 - 11986038
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||||||||| | ||||| ||| |||||||  |||||| ||||||||||||    
T  11986111 tgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaggcttcaatttagctcctaa 11986038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 134 - 207
Target Start/End: Original strand, 16261778 - 16261851
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||||||||| | | ||| ||||| |||||  |||||||||||||||||||    
T  16261778 tgattatgataaagactaacccccttaccttagataaagattaattccaacttaggcttcactttagctcctaa 16261851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 207
Target Start/End: Original strand, 53771366 - 53771439
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||||||||| | | ||| ||| | |||||  |||||||||||||||||||    
T  53771366 tgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaa 53771439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 8268795 - 8268755
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagcacgaa 48  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  8268795 aattaacatactcaaacttatcaccaaaacaagagcacgaa 8268755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 8275895 - 8275855
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagcacgaa 48  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  8275895 aattaacatactcaaacttatcaccaaaacaagagcacgaa 8275855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 9303150 - 9303110
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagcacgaa 48  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  9303150 aattaacatactcaaacttatcaccaaaacaagagcacgaa 9303110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 11477241 - 11477201
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagcacgaa 48  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  11477241 aattaacatactcaaacttatcaccaaaacaagagcacgaa 11477201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 206
Target Start/End: Complemental strand, 51961062 - 51960990
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctccta 206  Q
    |||||||||| |||||||||||||||||||||| | ||||| ||| |||||||   |||||||||| ||||||    
T  51961062 tgattatgatgaagactaacccccttaccttagataatgattaatccaaacttagacttcactttacctccta 51960990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 7854180 - 7854242
Alignment:
Q  2 acatcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    ||||||||||||||||||||||| |||| | | ||||  |||||||| |||||||||||||||    
T  7854180 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggtt 7854242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 18970119 - 18970181
Alignment:
Q  2 acatcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    |||||||||||||||| | |||| |||||| | |||| ||||||||| |||||||||||||||    
T  18970119 acatcaaattaacatacttaaacatatcactacaacatgagcacgaatttcaaagattgggtt 18970181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 30153140 - 30153202
Alignment:
Q  2 acatcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    ||||||||||||||||||||||| |||| | | ||||  |||||||| |||||||||||||||    
T  30153140 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggtt 30153202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 54685358 - 54685296
Alignment:
Q  2 acatcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    ||||||||||||||||||||||| |||| | | ||||  |||||||| |||||||||||||||    
T  54685358 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggtt 54685296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 207
Target Start/End: Original strand, 2050116 - 2050189
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||||||||| | | ||| ||| | |||||  |||||| ||||||||||||    
T  2050116 tgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaa 2050189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 207
Target Start/End: Original strand, 38168238 - 38168311
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||||||||| | | ||| ||| | |||||  |||||| ||||||||||||    
T  38168238 tgattatgataaagactaacccccttaccttagatgaagattaatcccaacttaggcttcaatttagctcctaa 38168311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 45581830 - 45581891
Alignment:
Q  3 catcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    |||||||||||||||||||||| |||| | | ||||  |||||||| |||||||||||||||    
T  45581830 catcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggtt 45581891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 48421776 - 48421837
Alignment:
Q  3 catcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    ||||||||||||||| |||||| |||||| | |||| ||||| ||| |||||||||||||||    
T  48421776 catcaaattaacatactcaaacatatcactacaacatgagcatgaatttcaaagattgggtt 48421837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 16261651 - 16261713
Alignment:
Q  2 acatcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    ||||||||||||||||| ||||| |||| | | ||||  |||||||| |||||||||||||||    
T  16261651 acatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgggtt 16261713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 33342079 - 33342141
Alignment:
Q  2 acatcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    ||||||||||||||||||||||| |||| | |  |||  |||||||| |||||||||||||||    
T  33342079 acatcaaattaacatattcaaacatatctctaccacattagcacgaatttcaaagattgggtt 33342141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 53771239 - 53771301
Alignment:
Q  2 acatcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    ||||||||||||||||| ||||| |||| | | ||||  |||||||| |||||||||||||||    
T  53771239 acatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgggtt 53771301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 55513068 - 55513130
Alignment:
Q  2 acatcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    ||||| ||||||||||||||||| |||| | | ||||  |||||||| |||||||||||||||    
T  55513068 acatcgaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggtt 55513130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 15550797 - 15550858
Alignment:
Q  3 catcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    ||||||||||||||| |||||| |||||| | |||| ||||||||| ||||||  |||||||    
T  15550797 catcaaattaacatactcaaacatatcactacaacatgagcacgaatttcaaaagttgggtt 15550858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 207
Target Start/End: Original strand, 33342205 - 33342278
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| ||||||||||| |||||||||| | | ||| ||| | |||||  |||||| ||||||||||||    
T  33342205 tgattatgataaagactaaccctcttaccttagatgaagattaatcccaacttaggcttcaatttagctcctaa 33342278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 207
Target Start/End: Original strand, 54651765 - 54651838
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| ||||| |||||||||||||||| | ||||| ||  |||||||  |||||| || |||||||||    
T  54651765 tgattatgatgaagacaaacccccttaccttagatgatgattaacccaaacttttgcttcaattaagctcctaa 54651838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 2449183 - 2449151
Alignment:
Q  134 tgattatgattaagactaacccccttaccttag 166  Q
    |||||||||| ||||||||||||||||||||||    
T  2449183 tgattatgataaagactaacccccttaccttag 2449151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 13839201 - 13839233
Alignment:
Q  134 tgattatgattaagactaacccccttaccttag 166  Q
    |||||||||| ||||||||||||||||||||||    
T  13839201 tgattatgatgaagactaacccccttaccttag 13839233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 14842518 - 14842486
Alignment:
Q  134 tgattatgattaagactaacccccttaccttag 166  Q
    |||||||||| ||||||||||||||||||||||    
T  14842518 tgattatgataaagactaacccccttaccttag 14842486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 17912429 - 17912397
Alignment:
Q  134 tgattatgattaagactaacccccttaccttag 166  Q
    |||||||||| ||||||||||||||||||||||    
T  17912429 tgattatgataaagactaacccccttaccttag 17912397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 19260780 - 19260748
Alignment:
Q  134 tgattatgattaagactaacccccttaccttag 166  Q
    |||||||||| ||||||||||||||||||||||    
T  19260780 tgattatgataaagactaacccccttaccttag 19260748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 23492697 - 23492729
Alignment:
Q  134 tgattatgattaagactaacccccttaccttag 166  Q
    |||||||||| ||||||||||||||||||||||    
T  23492697 tgattatgataaagactaacccccttaccttag 23492729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 141; Significance: 5e-74; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 8 - 252
Target Start/End: Original strand, 22886531 - 22886775
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtttatataaattcttactcaattaagcacnnnnnnnatacaaacc 107  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||       |||||||||    
T  22886531 aattaacatactcaaacttattaccaaaacaagagcacgaaattcaaagattggattcatataaattcttactcaattaagcactttttc-atacaaacc 22886629  T
Q  108 aagaaaaattgcaaaacaaacatttgtgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    ||||||| |||||||| ||||| || ||||||||||||||||||||||||||||||||||| ||||| ||| ||||||| ||||||||||||||||||||    
T  22886630 aagaaaa-ttgcaaaaaaaacaattatgattatgattaagactaacccccttaccttaggtaatgattaatccaaacttaagcttcactttagctcctaa 22886728  T
Q  208 -ttctccaatcttcaagttttccccttt-gctaacccttgttcttca 252  Q
     |||| |||||||||||||| |||||||  |||||||||||||||||    
T  22886729 tttcttcaatcttcaagtttccccctttctctaacccttgttcttca 22886775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 8 - 251
Target Start/End: Complemental strand, 3431331 - 3431088
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtttatataaattcttactcaattaagcacnnnnnnnatacaaacc 107  Q
    |||||||||| |||| |||||||||||||||||||||||||| | | |||||||||| |||| |||||| ||||||||||||||       |||||||||    
T  3431331 aattaacatactcaatcttatcaccaaaacaagagcacgaaaattagagattgggttcatatgaattctcactcaattaagcactttttc-atacaaacc 3431233  T
Q  108 aagaaaaattgcaaaacaaacatttgtgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    ||||||||||||||| |||||| || |||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  3431232 aagaaaaattgcaaa-caaacaattatgattatgatgaagactaacccccttaccttaggttatgatcaatccaaacttgggcttcactttagctcctaa 3431134  T
Q  208 tt-ctccaatcttcaagttt-tcccctttgctaacccttgttcttc 251  Q
    || || |||||||||||||| |||| ||  ||||||||||||||||    
T  3431133 ttgcttcaatcttcaagtttctccctttctctaacccttgttcttc 3431088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 8 - 251
Target Start/End: Complemental strand, 21494511 - 21494269
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtttatataaattcttactcaattaagcacnnnnnnnatacaaacc 107  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||       |||||||||    
T  21494511 aattaacatactcaaaattatcaccaaaacaagagcacgaaattcaaagattgggttcatataaatacttactcaattaagcactatttc-atacaaacc 21494413  T
Q  108 aagaaaaattgcaaaacaaacatttgtgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    ||||||| |||||||  ||||| |  |||||||||  |||||||||||||||||||||| | ||||| ||| |||||||  |||||||||||||||||||    
T  21494412 aagaaaa-ttgcaaacaaaacaatcatgattatgaagaagactaacccccttaccttagataatgattaatccaaacttaggcttcactttagctcctaa 21494314  T
Q  208 ttctccaatcttcaagttttccccttt-gctaacccttgttcttc 251  Q
    |||| |||||||||||||| |||||||  ||||||||||||||||    
T  21494313 ttcttcaatcttcaagtttacccctttctctaacccttgttcttc 21494269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 112 - 251
Target Start/End: Complemental strand, 16038839 - 16038700
Alignment:
Q  112 aaaattgcaaaacaaacatttgtgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattct 211  Q
    |||||||||||  ||||| |  |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16038839 aaaattgcaaacaaaacaatcatgattatgatgaagacaaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattct 16038740  T
Q  212 ccaatcttcaagttttcccctttgctaacccttgttcttc 251  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  16038739 ccaatcttcaagtttccccctttgctaacccttgttcttc 16038700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 107 - 251
Target Start/End: Original strand, 2545239 - 2545384
Alignment:
Q  107 caagaaaaattgcaaaacaaacatttgtgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctccta 206  Q
    |||| |||||||||||  ||||| |  |||||||||| |||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||    
T  2545239 caaggaaaattgcaaacaaaacaatcatgattatgatgaagactaacccccttaccttaggttatgattaattcaaatttaagcttcactttagctccta 2545338  T
Q  207 attctccaatcttcaagtttt-cccctttgctaacccttgttcttc 251  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||    
T  2545339 attcttcaatcttcaagttttccccctttgctaacccttgttcttc 2545384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 134 - 251
Target Start/End: Original strand, 22147757 - 22147875
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttt-tcccct 232  Q
    |||||||||  || ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||| |    
T  22147757 tgattatgaagaacactaaaccccttaccttaggttatgatcaattcaaacttgagcttcaccttagctcctaattcttcaatcttcaagtttctccctt 22147856  T
Q  233 ttgctaacccttgttcttc 251  Q
    |  ||||||||| ||||||    
T  22147857 tctctaacccttattcttc 22147875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 107 - 251
Target Start/End: Original strand, 18612698 - 18612843
Alignment:
Q  107 caagaaaaattgcaaaacaaacatttgtgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctccta 206  Q
    |||| |||||||||||  ||||| |  ||||| |||  || |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  18612698 caaggaaaattgcaaacaaaacaatcatgattgtgaagaacactaacccccttaccttaggttatgatcaattcaaatttgggcttcactttagctccta 18612797  T
Q  207 attctccaatcttcaagt-tttcccctttgctaacccttgttcttc 251  Q
    ||||| |||||||||||| | |||| ||  ||||||||||||||||    
T  18612798 attcttcaatcttcaagtatctccctttctctaacccttgttcttc 18612843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 24385683 - 24385610
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||||||||| | | ||| ||| | |||||  |||||||||||||||||||    
T  24385683 tgattatgataaagactaacccccttaccttagatgaagattaatcccaacttaggcttcactttagctcctaa 24385610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 43373423 - 43373350
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||||||||| | | ||| ||| | |||||  |||||||||||||||||||    
T  43373423 tgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaa 43373350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 18612611 - 18612651
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagcacgaa 48  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  18612611 aattaacatactcaaacttatcaccaaaacaagagcacgaa 18612651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 18619516 - 18619556
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagcacgaa 48  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  18619516 aattaacatactcaaacttatcaccaaaacaagagcacgaa 18619556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 22147643 - 22147683
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagcacgaa 48  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  22147643 aattaacatactcaaacttatcaccaaaacaagagcacgaa 22147683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 22321503 - 22321441
Alignment:
Q  2 acatcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    ||||||||||||||||||||||| |||| | | |||  ||||||||| |||||||||||||||    
T  22321503 acatcaaattaacatattcaaacatatctctacaacctgagcacgaatttcaaagattgggtt 22321441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 17502360 - 17502421
Alignment:
Q  3 catcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    ||||||||||||||| |||||| |||||| | |||| |||||| || |||||||||||||||    
T  17502360 catcaaattaacatactcaaacatatcactacaacatgagcacaaatttcaaagattgggtt 17502421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 16038932 - 16038892
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagcacgaa 48  Q
    |||||||||| |||||||| |||||||||||||||||||||    
T  16038932 aattaacatactcaaacttctcaccaaaacaagagcacgaa 16038892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 24385809 - 24385747
Alignment:
Q  2 acatcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    ||||||||||| ||||||||||| |||| | | ||||  |||||||| |||||||||||||||    
T  24385809 acatcaaattatcatattcaaacatatctctacaacataagcacgaatttcaaagattgggtt 24385747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 41506866 - 41506804
Alignment:
Q  2 acatcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    ||||||||||||||||||||||| |||| | | ||||  |||||| | |||||||||||||||    
T  41506866 acatcaaattaacatattcaaacatatctctacaacataagcacggatttcaaagattgggtt 41506804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 4234054 - 4234115
Alignment:
Q  3 catcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    ||||||||||||||| |||||| ||||||   |||| |||||| || |||||||||||||||    
T  4234054 catcaaattaacatactcaaacatatcactgcaacatgagcacaaatttcaaagattgggtt 4234115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 21259547 - 21259486
Alignment:
Q  3 catcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    ||||||||||||||| |||||| |||||| | |||| ||||||||| ||||||  |||||||    
T  21259547 catcaaattaacatactcaaacatatcactacaacatgagcacgaatttcaaaagttgggtt 21259486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 2545151 - 2545191
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagcacgaa 48  Q
    |||||||||| |||||||||| ||||||| |||||||||||    
T  2545151 aattaacatactcaaacttattaccaaaataagagcacgaa 2545191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 5238405 - 5238437
Alignment:
Q  134 tgattatgattaagactaacccccttaccttag 166  Q
    |||||||||| ||||||||||||||||||||||    
T  5238405 tgattatgataaagactaacccccttaccttag 5238437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 22907159 - 22907127
Alignment:
Q  134 tgattatgattaagactaacccccttaccttag 166  Q
    |||||||||| ||||||||||||||||||||||    
T  22907159 tgattatgataaagactaacccccttaccttag 22907127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 24661193 - 24661161
Alignment:
Q  134 tgattatgattaagactaacccccttaccttag 166  Q
    |||||||||| ||||||||||||||||||||||    
T  24661193 tgattatgataaagactaacccccttaccttag 24661161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 43685864 - 43685896
Alignment:
Q  134 tgattatgattaagactaacccccttaccttag 166  Q
    |||||||||| ||||||||||||||||||||||    
T  43685864 tgattatgataaagactaacccccttaccttag 43685896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 141; Significance: 5e-74; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 10 - 251
Target Start/End: Complemental strand, 18839291 - 18839051
Alignment:
Q  10 ttaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtttatataaattcttactcaattaagcacnnnnnnnatacaaaccaa 109  Q
    |||||||| ||||||||||||||||||||||||||||||| | | |||||||||| |||| |||||| ||||||||||||||       |||||||||||    
T  18839291 ttaacatactcaaacttatcaccaaaacaagagcacgaaaattagagattgggttcatatgaattctcactcaattaagcactttttc-atacaaaccaa 18839193  T
Q  110 gaaaaattgcaaaacaaacatttgtgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaatt 209  Q
    ||||||||||||| |||||| || |||||||||| |||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||| ||||||    
T  18839192 gaaaaattgcaaa-caaacaattatgattatgatgaagactaacccccttaccttaggttatgattaatccaaacttaagcttcactttagcttctaatt 18839094  T
Q  210 ctccaatcttcaagtttt-cccctttgctaacccttgttcttc 251  Q
    |||||||||| ||||||| ||||||||||||||||||||||||    
T  18839093 ctccaatctttaagttttccccctttgctaacccttgttcttc 18839051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 8 - 251
Target Start/End: Complemental strand, 18823438 - 18823196
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtttatataaattcttactcaattaagcacnnnnnnnatacaaacc 107  Q
    |||||||||| ||||||||||||||||||||||||||||||| | | |||||||||| |||| |||||| ||||| ||||||||       |||||||||    
T  18823438 aattaacatactcaaacttatcaccaaaacaagagcacgaaaattagagattgggttcatatgaattctcactcacttaagcactttttc-atacaaacc 18823340  T
Q  108 aagaaaaattgcaaaacaaacatttgtgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    ||||||||||||||| |||||| || |||||||||| |||||||||||||||||||||||||||||| ||| ||||||| | ||||||||||||||||||    
T  18823339 aagaaaaattgcaaa-caaacaattatgattatgatgaagactaacccccttaccttaggttatgattaatccaaacttaaacttcactttagctcctaa 18823241  T
Q  208 ttctccaatcttcaagtttt-cccctttgctaacccttgttcttc 251  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||    
T  18823240 ttctccaatctttaagttttccccctttgctaacccttgttcttc 18823196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 8 - 253
Target Start/End: Complemental strand, 32276814 - 32276570
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtttatataaattcttactcaattaagcacnnnnnnnatacaaacc 107  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||| |||||||||||||       |||||||      
T  32276814 aattaacatactcaaacttatcaccaaaacaagagcacgaaattcaaagattgggttcagataaatacttgctcaattaagcactttttc-atacaaata 32276716  T
Q  108 aagaaaaattgcaaaacaaacatttgtgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    ||||||| |||||||  ||||| || |||||||||| |||||||||||||||||||||| | ||||| ||| ||||||| ||||||||||||||||||||    
T  32276715 aagaaaa-ttgcaaacaaaacaattatgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaagcttcactttagctcctaa 32276617  T
Q  208 ttctccaatcttcaagttttccccttt-gctaacccttgttcttcat 253  Q
    |||| ||||||||||| || |||||||  ||||||||||||||||||    
T  32276616 ttcttcaatcttcaagcttccccctttctctaacccttgttcttcat 32276570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 134 - 247
Target Start/End: Complemental strand, 13620742 - 13620627
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa-ttctccaatcttcaagttttcccct 232  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||| |||| ||||||||||||||||||||    
T  13620742 tgattatgaagaagactaacccccttaccttaggttatgatcaattcaaactcaggcttcactttagctcctaatttcttcaatcttcaagttttcccct 13620643  T
Q  233 tt-gctaacccttgtt 247  Q
    ||  ||||||||||||    
T  13620642 ttctctaacccttgtt 13620627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 134 - 251
Target Start/End: Original strand, 19629649 - 19629766
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttt-tcccct 232  Q
    |||||||||  || |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||| |    
T  19629649 tgattatgaagaacactaacccccttaccttaggttatgatcaattcaaatttgagcttcac-ttagctcctaattctccaatcttcaagtttctccctt 19629747  T
Q  233 ttgctaacccttgttcttc 251  Q
    |   |||||||||||||||    
T  19629748 tctttaacccttgttcttc 19629766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 107 - 251
Target Start/End: Complemental strand, 16299943 - 16299799
Alignment:
Q  107 caagaaaaattgcaaaacaaacatttgtgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctccta 206  Q
    |||| ||||||||||| |||||| |  |||||| ||  |||||||||||||||||||||||| ||||| ||| |||||||  ||||||||||||||||||    
T  16299943 caaggaaaattgcaaa-caaacaatcatgattaagaagaagactaacccccttaccttaggtaatgattaatccaaacttaggcttcactttagctccta 16299845  T
Q  207 attctccaatcttcaagttttccccttt-gctaacccttgttcttc 251  Q
    ||||| ||||||||||||||  ||||||  ||||||||||||||||    
T  16299844 attcttcaatcttcaagtttcaccctttctctaacccttgttcttc 16299799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 15742150 - 15742032
Alignment:
Q  135 gattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcct-aattctccaatcttcaagttt-tcccct 232  Q
    ||||||||| |||||||||||||||||||||||| ||||| ||| |||||||  ||||||||||||||||| ||| || |||||||||||||| |||| |    
T  15742150 gattatgataaagactaacccccttaccttaggtaatgattaatccaaacttaggcttcactttagctcctaaatccttcaatcttcaagtttctccctt 15742051  T
Q  233 ttgctaacccttgttcttc 251  Q
    |   |||||||||||||||    
T  15742050 tctataacccttgttcttc 15742032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 134 - 251
Target Start/End: Complemental strand, 18002426 - 18002307
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcct-aattctccaatcttcaagttt-tcccc 231  Q
    |||||||||| |||||||||||||||||||||||||||||| |||  ||||||   |||||||||||||||| ||| || |||||||||||||| |||      
T  18002426 tgattatgataaagactaacccccttaccttaggttatgattaatctaaacttagccttcactttagctcctaaatccttcaatcttcaagtttctcctt 18002327  T
Q  232 tttgctaacccttgttcttc 251  Q
    ||  ||||||||||||||||    
T  18002326 ttctctaacccttgttcttc 18002307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 134 - 207
Target Start/End: Original strand, 26090060 - 26090133
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||||||||||| ||| |||||  ||||||  |||||||||||||||||||    
T  26090060 tgattatgataaagactaacccccttaccttaggtaatgctcaatctaaacttaggcttcactttagctcctaa 26090133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 207
Target Start/End: Original strand, 23148304 - 23148377
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||||||||||| | ||| ||| | |||||  |||||| ||||||||||||    
T  23148304 tgattatgatgaagactaacccccttaccttaggtaaagattaatcccaacttaggcttcaatttagctcctaa 23148377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 207
Target Start/End: Original strand, 23153755 - 23153828
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||||||||||| | ||| ||| | |||||  |||||| ||||||||||||    
T  23153755 tgattatgatgaagactaacccccttaccttaggtaaagattaatcccaacttaggcttcaatttagctcctaa 23153828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 207
Target Start/End: Original strand, 23995248 - 23995321
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||||||||| | | ||| ||| | |||||  |||||||||||||||||||    
T  23995248 tgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaa 23995321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 207
Target Start/End: Original strand, 27751743 - 27751816
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||||||||| | | ||| ||| |||||||  |||||| ||||||||||||    
T  27751743 tgattatgatgaagactaacccccttaccttagataaagattaatccaaacttaggcttcaatttagctcctaa 27751816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 203
Target Start/End: Complemental strand, 35009383 - 35009314
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctc 203  Q
    |||||||||| ||||||||||||||||| |||| | ||||| ||| |||||||  |||||||||||||||    
T  35009383 tgattatgatgaagactaacccccttactttagataatgattaatccaaactttggcttcactttagctc 35009314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 26089933 - 26089995
Alignment:
Q  2 acatcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    ||||||||||||||||||||||| |||| | | ||||  |||||||| |||||||||||||||    
T  26089933 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggtt 26089995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 35015214 - 35015152
Alignment:
Q  2 acatcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    ||||||||||||||||||||||| |||| | | ||||  |||||||| |||||||||||||||    
T  35015214 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggtt 35015152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 15889762 - 15889701
Alignment:
Q  3 catcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    ||||||||||||||| |||||| |||||| | |||| ||||||||| ||||||| |||||||    
T  15889762 catcaaattaacatactcaaacatatcactacaacatgagcacgaatttcaaaggttgggtt 15889701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 22585602 - 22585541
Alignment:
Q  3 catcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    ||||||||||| ||| |||||| |||||| | |||| ||||||||| |||||||||||||||    
T  22585602 catcaaattaaaatactcaaacatatcactacaacatgagcacgaatttcaaagattgggtt 22585541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 22590433 - 22590372
Alignment:
Q  3 catcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    ||||||||||| ||| |||||| |||||| | |||| ||||||||| |||||||||||||||    
T  22590433 catcaaattaaaatactcaaacatatcactacaacatgagcacgaatttcaaagattgggtt 22590372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 16300031 - 16299991
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagcacgaa 48  Q
    |||||||||| |||||||||||||| |||||||||||||||    
T  16300031 aattaacatactcaaacttatcaccgaaacaagagcacgaa 16299991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 19629535 - 19629575
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagcacgaa 48  Q
    |||||||||| ||||||||||||||| ||||||||||||||    
T  19629535 aattaacatactcaaacttatcaccacaacaagagcacgaa 19629575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 19983349 - 19983290
Alignment:
Q  2 acatcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgg 61  Q
    ||||||||||||||||||||||| |||| | | ||||  |||||||| ||||||||||||    
T  19983349 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgg 19983290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 15004963 - 15004902
Alignment:
Q  2 acatcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    ||||||||||| |||| |||||| |||||| | |||| ||||||||| |||||||||||||||    
T  15004963 acatcaaatta-catactcaaacatatcactacaacatgagcacgaatttcaaagattgggtt 15004902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 18002553 - 18002491
Alignment:
Q  2 acatcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    ||||||||| ||||||||||||| |||| | | ||||  |||||||| |||||||||||||||    
T  18002553 acatcaaatgaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggtt 18002491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 18583515 - 18583577
Alignment:
Q  2 acatcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    |||||||||||||||||||||||  ||| | | ||||  |||||||| |||||||||||||||    
T  18583515 acatcaaattaacatattcaaacacatctctacaacataagcacgaatttcaaagattgggtt 18583577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 15742275 - 15742214
Alignment:
Q  3 catcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    ||||||||||||||| |||||| |||| | | ||||  |||||||| |||||||||||||||    
T  15742275 catcaaattaacataatcaaacatatctctacaacataagcacgaatttcaaagattgggtt 15742214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 207
Target Start/End: Original strand, 29666182 - 29666255
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| ||||||||||| ||||  |||| | ||||| ||| |||||||  |||||| ||||||||||||    
T  29666182 tgattatgatgaagactaacccacttatgttagataatgattaatccaaacttaggcttcaatttagctcctaa 29666255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 1657692 - 1657660
Alignment:
Q  134 tgattatgattaagactaacccccttaccttag 166  Q
    |||||||||| ||||||||||||||||||||||    
T  1657692 tgattatgatgaagactaacccccttaccttag 1657660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 15862790 - 15862822
Alignment:
Q  134 tgattatgattaagactaacccccttaccttag 166  Q
    |||||||||| ||||||||||||||||||||||    
T  15862790 tgattatgatgaagactaacccccttaccttag 15862822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 139; Significance: 8e-73; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 8 - 251
Target Start/End: Original strand, 5426 - 5668
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtttatataaattcttactcaattaagcacnnnnnnnatacaaacc 107  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||       |||||||||    
T  5426 aattaacatactcaaacttatcaccaaaacaagagcacgaaattcaaagattgggttcatataaattcttactcaattaagcactttttc-atacaaacc 5524  T
Q  108 aagaaaaattgcaaaacaaacatttgtgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    ||||||| |||||||  ||||| |  |||||||||| |||||||||||||||||||||||| ||||| ||| |||||||| |||||| ||||||||||||    
T  5525 aagaaaa-ttgcaaacaaaacaatcatgattatgatgaagactaacccccttaccttaggtaatgattaatccaaacttgggcttcattttagctcctaa 5623  T
Q  208 ttctccaatcttcaagttttccccttt-gctaacccttgttcttc 251  Q
    |||| |||||||||||||| |||||||  ||||||||||||||||    
T  5624 ttcttcaatcttcaagtttccccctttctctaacccttgttcttc 5668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 132; Significance: 1e-68; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 8 - 251
Target Start/End: Complemental strand, 9730433 - 9730190
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtttatataaattcttactcaattaagcacnnnnnnnatacaaacc 107  Q
    |||||||||| |||| |||||||||||||||||||||||||| | | |||||||||| |||| |||||| ||||||||||||||       |||||||||    
T  9730433 aattaacatactcaatcttatcaccaaaacaagagcacgaaaattagagattgggttcatatgaattctcactcaattaagcactttttc-atacaaacc 9730335  T
Q  108 aagaaaaattgcaaaacaaacatttgtgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    ||||||||||||||| |||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  9730334 aagaaaaattgcaaa-caaacaattatgattatgatgaagactaacccccttaccttaggttatgatcaattcaaacttgggcttcactttagctcctaa 9730236  T
Q  208 tt-ctccaatcttcaagttt-tcccctttgctaacccttgttcttc 251  Q
    || || |||||||||||||| |||| ||  ||||||||||||||||    
T  9730235 ttgcttcaatcttcaagtttctccctttctctaacccttgttcttc 9730190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 8 - 251
Target Start/End: Original strand, 7529105 - 7529347
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtttatataaattcttactcaattaagcacnnnnnnnatacaaacc 107  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| | ||||||| |||||||| |||||||||||||||||       |||||||||    
T  7529105 aattaacatactcaaacttatcaccaaaacaagagcacgaaattcaagggttgggttcatataaatacttactcaattaagcactatttc-atacaaacc 7529203  T
Q  108 aagaaaaattgcaaaacaaacatttgtgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    ||||||| |||||||  ||||| || |||||||||  |||||||||||||||||||||| | ||||| ||| |||||||  |||||||||||||||| ||    
T  7529204 aagaaaa-ttgcaaacaaaacaattatgattatgaagaagactaacccccttaccttagataatgattaatccaaacttaggcttcactttagctcccaa 7529302  T
Q  208 ttctccaatcttcaagttttccccttt-gctaacccttgttcttc 251  Q
    |||| |||||||||||||| |||||||  ||||||||||||||||    
T  7529303 ttcttcaatcttcaagtttccccctttctctaacccttgttcttc 7529347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 8 - 207
Target Start/End: Complemental strand, 108883 - 108686
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtttatataaattcttactcaattaagcacnnnnnnnatacaaacc 107  Q
    |||||||||| ||||||||||||||||||||||||||||||| | |  ||||||||| |||| |||||| ||||||||||||||       |||||||||    
T  108883 aattaacatactcaaacttatcaccaaaacaagagcacgaaaattagggattgggttcatatgaattctcactcaattaagcactttttc-atacaaacc 108785  T
Q  108 aagaaaaattgcaaaacaaacatttgtgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    ||||||||||||||| |||||| || |||||||||| |||||||||||||||||||||| | | ||| ||| | |||||  ||||||||||| |||||||    
T  108784 aagaaaaattgcaaa-caaacaattatgattatgatgaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttacctcctaa 108686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 134 - 251
Target Start/End: Original strand, 17909824 - 17909942
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttttcccctt 233  Q
    |||||||||  || ||||||||||||||||||||||||||| ||| |||||||  ||||||||||| ||||||||||| |||||||||||||| ||||||    
T  17909824 tgattatgaagaacactaacccccttaccttaggttatgattaatccaaacttaggcttcactttaactcctaattcttcaatcttcaagtttccccctt 17909923  T
Q  234 t-gctaacccttgttcttc 251  Q
    |  ||||||||||||||||    
T  17909924 tctctaacccttgttcttc 17909942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 134 - 251
Target Start/End: Original strand, 34939596 - 34939714
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttt-tcccct 232  Q
    |||||||||  || ||||||||||||||||||||||||||| |||||| ||||   |||||||||||||||||||||| |||||||||||||| |||| |    
T  34939596 tgattatgaagaacactaacccccttaccttaggttatgattaattcacacttagacttcactttagctcctaattcttcaatcttcaagtttctccctt 34939695  T
Q  233 ttgctaacccttgttcttc 251  Q
    |  ||||||||||||||||    
T  34939696 tctctaacccttgttcttc 34939714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 206
Target Start/End: Original strand, 25005138 - 25005210
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctccta 206  Q
    |||||||||| ||||||||||||||||| |||| | ||||| ||| |||||||  ||||||||||||||||||    
T  25005138 tgattatgatgaagactaacccccttactttagataatgattaatccaaacttaggcttcactttagctccta 25005210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 22662731 - 22662670
Alignment:
Q  3 catcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    |||||||||||||||||||||  |||||| | |||| ||||||||| |||||||||||||||    
T  22662731 catcaaattaacatattcaaatatatcactacaacatgagcacgaatttcaaagattgggtt 22662670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 207
Target Start/End: Original strand, 23507271 - 23507344
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||||||||| | | ||| ||||| |||||  ||||||||||| |||||||    
T  23507271 tgattatgataaagactaacccccttaccttagataaagattaattccaacttatgcttcactttaactcctaa 23507344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 27182502 - 27182429
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||||||||||| | ||| ||| | |||||  |||||| ||||||||||||    
T  27182502 tgattatgatgaagactaacccccttaccttaggtaaagattaatcccaacttaggcttcaatttagctcctaa 27182429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 17909710 - 17909750
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagcacgaa 48  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  17909710 aattaacatactcaaacttatcaccaaaacaagagcacgaa 17909750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 207
Target Start/End: Complemental strand, 18531018 - 18530946
Alignment:
Q  135 gattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    ||||||||| |||||||||||||||||||||| ||||||| ||    |||||  |||||||||||||||||||    
T  18531018 gattatgatgaagactaacccccttaccttagattatgattaacctcaacttaggcttcactttagctcctaa 18530946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 2032008 - 2032070
Alignment:
Q  2 acatcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    ||||||||||||||||||||||| |||| | | ||||  |||||||| |||||||||||||||    
T  2032008 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggtt 2032070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 11342883 - 11342945
Alignment:
Q  2 acatcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    ||||||||||||||||||||||| |||| | | ||||  |||||||| |||||||||||||||    
T  11342883 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggtt 11342945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 21650893 - 21650955
Alignment:
Q  2 acatcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    ||||||||||||||||||||||| |||| | | ||||  |||||||| |||||||||||||||    
T  21650893 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggtt 21650955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 137 - 207
Target Start/End: Original strand, 32951016 - 32951086
Alignment:
Q  137 ttatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    ||||||| |||||||||||||||||||||  | ||||| |||||||||||   ||||| ||||||||||||    
T  32951016 ttatgatgaagactaacccccttaccttaaataatgattaattcaaacttagacttcaatttagctcctaa 32951086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 22053784 - 22053711
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||||||||| ||||||| ||    |||||   ||||||||||||||||||    
T  22053784 tgattatgatgaagactaacccccttaccttagattatgattaacctcaacttagacttcactttagctcctaa 22053711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 21205124 - 21205186
Alignment:
Q  2 acatcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    ||||||||||||||||| ||||| |||| | | ||||  |||||||| |||||||||||||||    
T  21205124 acatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgggtt 21205186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 23981436 - 23981363
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    ||||| |||| ||||||||||||||||||| || | | ||| ||| |||||||  |||||| ||||||||||||    
T  23981436 tgattttgatgaagactaacccccttacctaagatgaagattaatccaaacttaggcttcaatttagctcctaa 23981363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 207
Target Start/End: Original strand, 2032135 - 2032207
Alignment:
Q  135 gattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    ||||||||| || ||||||||||||||||||| | | ||| ||  |||||||  |||||| ||||||||||||    
T  2032135 gattatgatgaaaactaacccccttaccttagataaggattaacccaaacttaggcttcaatttagctcctaa 2032207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 16105968 - 16106000
Alignment:
Q  134 tgattatgattaagactaacccccttaccttag 166  Q
    |||||||||| ||||||||||||||||||||||    
T  16105968 tgattatgataaagactaacccccttaccttag 16106000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 20623287 - 20623319
Alignment:
Q  134 tgattatgattaagactaacccccttaccttag 166  Q
    |||||||||| ||||||||||||||||||||||    
T  20623287 tgattatgataaagactaacccccttaccttag 20623319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 21233473 - 21233441
Alignment:
Q  134 tgattatgattaagactaacccccttaccttag 166  Q
    |||||||||| ||||||||||||||||||||||    
T  21233473 tgattatgataaagactaacccccttaccttag 21233441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 25900351 - 25900319
Alignment:
Q  134 tgattatgattaagactaacccccttaccttag 166  Q
    |||||||||| ||||||||||||||||||||||    
T  25900351 tgattatgataaagactaacccccttaccttag 25900319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 37053062 - 37053094
Alignment:
Q  134 tgattatgattaagactaacccccttaccttag 166  Q
    |||||||||| ||||||||||||||||||||||    
T  37053062 tgattatgataaagactaacccccttaccttag 37053094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 128; Significance: 3e-66; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 8 - 251
Target Start/End: Original strand, 371294 - 371537
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtttatataaattcttactcaattaagcacnnnnnnnatacaaacc 107  Q
    |||||||||| |||| |||||||||||||||||||||||||| | | |||||||||| |||| |||||| ||||||||||||||       |||||||||    
T  371294 aattaacatactcaatcttatcaccaaaacaagagcacgaaaattagagattgggttcatatgaattctcactcaattaagcactttttc-atacaaacc 371392  T
Q  108 aagaaaaattgcaaaacaaacatttgtgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    ||||||||||||||| |||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  371393 aagaaaaattgcaaa-caaacaattatgattatgatgaagactaacccccttaccttaggttatgatcaattcaaacttgggcttcactttagctcctaa 371491  T
Q  208 tt-ctccaatcttcaagttt-tcccctttgctaacccttgttcttc 251  Q
    || || |||| ||||||||| |||| ||  ||||||||||||||||    
T  371492 ttgcttcaatattcaagtttctccctttctctaacccttgttcttc 371537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 148 - 251
Target Start/End: Complemental strand, 18253777 - 18253672
Alignment:
Q  148 actaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagtttt--cccctttgctaacccttg 245  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  18253777 actaacccccttaccttaggttatgatcaattcaaatttgagcttcactttagctcctaattctccaatcttcaagtttttccccctttgctaacccttg 18253678  T
Q  246 ttcttc 251  Q
    ||||||    
T  18253677 ttcttc 18253672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 134 - 251
Target Start/End: Original strand, 15862227 - 15862345
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagtttt-cccct 232  Q
    |||||||||| |  |||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||| |||||    
T  15862227 tgattatgataataactaacccccttaccttaggttatgatcaattcaaacttgagcttcaacttaactcctaattctccaatcttcaagttttccccct 15862326  T
Q  233 ttgctaacccttgttcttc 251  Q
    |||||||||||||||||||    
T  15862327 ttgctaacccttgttcttc 15862345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 134 - 234
Target Start/End: Complemental strand, 47480975 - 47480875
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttttcccctt 233  Q
    |||||||||| |||||||||||||||||||||| | ||||| ||| |||||||  ||||||||||| ||||||||||| |||||||||||||| ||||||    
T  47480975 tgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaggcttcactttacctcctaattcttcaatcttcaagtttccccctt 47480876  T
Q  234 t 234  Q
    |    
T  47480875 t 47480875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 134 - 207
Target Start/End: Original strand, 13321335 - 13321408
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||||||||| | ||||| ||| ||||| |  |||||||||||||||||||    
T  13321335 tgattatgatgaagactaacccccttaccttagataatgattaatccaaacctaggcttcactttagctcctaa 13321408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 134 - 207
Target Start/End: Original strand, 25124451 - 25124524
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||||||||| | ||||| |||  ||||||  |||||||||||||||||||    
T  25124451 tgattatgatgaagactaacccccttaccttagataatgattaatctaaacttaggcttcactttagctcctaa 25124524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 207
Target Start/End: Original strand, 2029245 - 2029318
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||||||||| | | ||| ||||| |||||  |||||| ||||||||||||    
T  2029245 tgattatgataaagactaacccccttaccttagataaagattaattccaacttaggcttcaatttagctcctaa 2029318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 226
Target Start/End: Complemental strand, 10000318 - 10000225
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaatt-ctccaatcttcaagttt 226  Q
    |||||||||| ||||| |||||||||||||||| | ||| | |||   |||||  ||||||||||||||||||||| || ||||||||||||||    
T  10000318 tgattatgatgaagacaaacccccttaccttagatgatgtttaatcttaacttaggcttcactttagctcctaattgcttcaatcttcaagttt 10000225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 207
Target Start/End: Original strand, 36052972 - 36053045
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||||||||| | | ||| ||| | |||||  |||||||||||||||||||    
T  36052972 tgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaa 36053045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 42056219 - 42056146
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||||||||| | | ||| ||| | |||||  |||||||||||||||||||    
T  42056219 tgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaa 42056146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 11580692 - 11580619
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||| ||||||||||||| ||| ||| ||| | |||||  |||||| ||||||||||||    
T  11580692 tgattatgataaagactaatccccttaccttagattaagattaatcccaacttaggcttcaatttagctcctaa 11580619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 207
Target Start/End: Original strand, 16212072 - 16212145
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||||||||| | | ||| ||| | |||||  |||||| ||||||||||||    
T  16212072 tgattatgataaagactaacccccttaccttagatgaagattaatcccaacttaggcttcaatttagctcctaa 16212145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 226
Target Start/End: Complemental strand, 48622614 - 48622521
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaatt-ctccaatcttcaagttt 226  Q
    |||||||||| || || |||||||||||||||| | ||| | |||   |||||  ||||||||||||||||||||| || ||||||||||||||    
T  48622614 tgattatgatgaaaacaaacccccttaccttagatgatgtttaatcttaacttaggcttcactttagctcctaattgcttcaatcttcaagttt 48622521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 233
Target Start/End: Original strand, 16418805 - 16418905
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaatt-ctccaatcttcaagttttcccct 232  Q
    |||||||||| || || |||||||||||||||| | ||| | |||   ||||  ||||||||||||||||||||||  | |||||||||||||| |||||    
T  16418805 tgattatgatgaaaacaaacccccttaccttagatgatgtttaatcttaactaaagcttcactttagctcctaattgtttcaatcttcaagtttccccct 16418904  T
Q  233 t 233  Q
    |    
T  16418905 t 16418905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 111326 - 111264
Alignment:
Q  2 acatcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    ||||||||||||||||||||||| |||| | | ||||  |||||||| |||||| ||||||||    
T  111326 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaatattgggtt 111264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 126613 - 126675
Alignment:
Q  2 acatcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    ||||||||||||||||||||||| |||| |   ||||  |||||||| |||||||||||||||    
T  126613 acatcaaattaacatattcaaacatatctctgcaacataagcacgaatttcaaagattgggtt 126675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 1937074 - 1937012
Alignment:
Q  2 acatcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    ||||||||||||||||||||||| |||| | |  |||  |||||||| |||||||||||||||    
T  1937074 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggtt 1937012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 2029119 - 2029181
Alignment:
Q  2 acatcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    ||||||||||||||||||||||| |||  | | ||||  |||||||| |||||||||||||||    
T  2029119 acatcaaattaacatattcaaacatatatctacaacataagcacgaatttcaaagattgggtt 2029181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 32494103 - 32494041
Alignment:
Q  2 acatcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    ||||||||||||||||||||||| |||| | | ||||  | |||||| |||||||||||||||    
T  32494103 acatcaaattaacatattcaaacatatctctacaacataaacacgaatttcaaagattgggtt 32494041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 42056346 - 42056284
Alignment:
Q  2 acatcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    ||||||||||||||||| ||||| |||| | | ||||  |||||||| |||||||||||||||    
T  42056346 acatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgggtt 42056284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 63
Target Start/End: Complemental strand, 2190243 - 2190182
Alignment:
Q  2 acatcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggt 63  Q
    ||||||||||||||||| ||||| |||| | | ||||  |||||||| ||||||||||||||    
T  2190243 acatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgggt 2190182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 13036969 - 13036896
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||| | |||||||||||||||||||||| | | ||| ||| | |||||  |||||| ||||||||||||    
T  13036969 tgattatggtgaagactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaa 13036896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 207
Target Start/End: Original strand, 15709470 - 15709543
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||| || |||||||||| ||||||| ||    |||||  |||||||||||||||||||    
T  15709470 tgattatgatgaagactaatcctcttaccttagattatgattaacctcaacttaggcttcactttagctcctaa 15709543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 7293334 - 7293366
Alignment:
Q  134 tgattatgattaagactaacccccttaccttag 166  Q
    |||||||||| ||||||||||||||||||||||    
T  7293334 tgattatgataaagactaacccccttaccttag 7293366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 11516545 - 11516577
Alignment:
Q  134 tgattatgattaagactaacccccttaccttag 166  Q
    |||||||||| ||||||||||||||||||||||    
T  11516545 tgattatgataaagactaacccccttaccttag 11516577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 14113934 - 14113902
Alignment:
Q  134 tgattatgattaagactaacccccttaccttag 166  Q
    |||||||||| ||||||||||||||||||||||    
T  14113934 tgattatgataaagactaacccccttaccttag 14113902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 15441509 - 15441477
Alignment:
Q  134 tgattatgattaagactaacccccttaccttag 166  Q
    |||||||||| ||||||||||||||||||||||    
T  15441509 tgattatgataaagactaacccccttaccttag 15441477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 17984801 - 17984753
Alignment:
Q  6 caaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaa 54  Q
    ||||||||||||  ||||| |||||| |||||||||||||||| |||||    
T  17984801 caaattaacatacccaaacatatcactaaaacaagagcacgaatttcaa 17984753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 30262074 - 30262042
Alignment:
Q  134 tgattatgattaagactaacccccttaccttag 166  Q
    |||||||||| ||||||||||||||||||||||    
T  30262074 tgattatgataaagactaacccccttaccttag 30262042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 39291565 - 39291513
Alignment:
Q  3 catcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaa 55  Q
    ||||||||||||||| |||||| |||||| | |||| ||||||||| ||||||    
T  39291565 catcaaattaacatactcaaacatatcactacaacatgagcacgaatttcaaa 39291513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 127; Significance: 1e-65; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 8 - 251
Target Start/End: Complemental strand, 28031289 - 28031047
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtttatataaattcttactcaattaagcacnnnnnnnatacaaacc 107  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||       |||||||||    
T  28031289 aattaacatactaaaacttatcaccaaaacaagagcacgaaattcaaagattgggttcatataaatacttgctcaattaagcactttctc-atacaaacc 28031191  T
Q  108 aagaaaaattgcaaaacaaacatttgtgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    ||||||| |||||||  ||||| |  |||||||||| |||||||||||||||||||||||| ||||| |||||||||||  ||||||||||| |||||||    
T  28031190 aagaaaa-ttgcaaacaaaacaatcatgattatgatgaagactaacccccttaccttaggtaatgattaattcaaacttaggcttcactttaactcctaa 28031092  T
Q  208 ttctccaatcttcaagttttccccttt-gctaacccttgttcttc 251  Q
    |||| |||||||||||||| |||||||  ||||||||||||||||    
T  28031091 ttcttcaatcttcaagtttccccctttctctaacccttgttcttc 28031047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 8 - 251
Target Start/End: Original strand, 33128249 - 33128492
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtttatataaattcttactcaattaagcacnnnnnnnatacaaacc 107  Q
    |||||||||| ||||||||||||||||||||||||||||||| | |||||||||||| ||| ||||||| ||||||||||||||       |||||||||    
T  33128249 aattaacatactcaaacttatcaccaaaacaagagcacgaaaattaaagattgggttcataaaaattctcactcaattaagcactttttc-atacaaacc 33128347  T
Q  108 aagaaaaattgcaaaacaaacatttgtgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcct-a 206  Q
    ||||||||||||||| |||||| || |||||||||| |||||||||||||||||||||||||||||| ||| |||||||  ||||||||||||||||| |    
T  33128348 aagaaaaattgcaaa-caaacaattatgattatgatgaagactaacccccttaccttaggttatgattaatccaaacttaggcttcactttagctcctaa 33128446  T
Q  207 attctccaatcttcaagttt-tcccctttgctaacccttgttcttc 251  Q
    || ||  ||||||||||||| |||| ||  ||||||||||||||||    
T  33128447 atcctttaatcttcaagtttctccctttctctaacccttgttcttc 33128492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 8 - 251
Target Start/End: Original strand, 17204536 - 17204779
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtttatataaattcttactcaattaagcacnnnnnnnatacaaacc 107  Q
    |||||||||| |||| |||||||||||||||||||||||||| | | |||||||||| |||| |||||| ||||||||||||||       |||||||||    
T  17204536 aattaacatactcaatcttatcaccaaaacaagagcacgaaaattagagattgggttcatatgaattctcactcaattaagcactttttc-atacaaacc 17204634  T
Q  108 aagaaaaattgcaaaacaaacatttgtgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    ||||||||||||||| |||||| || |||||||||| ||||||||||||||||| |||||||||||| ||| |||||||   |||||||||| |||||||    
T  17204635 aagaaaaattgcaaa-caaacaattatgattatgatgaagactaacccccttactttaggttatgattaatccaaacttagacttcactttaactcctaa 17204733  T
Q  208 -ttctccaatcttcaagttttccccttt-gctaacccttgttcttc 251  Q
     |||| ||||||||||||||  ||||||  ||||||||||||||||    
T  17204734 tttcttcaatcttcaagtttcgccctttctctaacccttgttcttc 17204779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 134 - 251
Target Start/End: Complemental strand, 7507788 - 7507670
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaag-ttttcccct 232  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||| |||||    
T  7507788 tgattatgatgaagactaacccccttaccttaggttatgatcaattcaaacttgagtttcactttaactcctaattctccaatcttcaagctttccccct 7507689  T
Q  233 ttgctaacccttgttcttc 251  Q
    |||||||||||||||||||    
T  7507688 ttgctaacccttgttcttc 7507670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 134 - 247
Target Start/End: Complemental strand, 23777993 - 23777879
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagtttt-cccct 232  Q
    |||||||||| |  ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||    
T  23777993 tgattatgatgataactaacccctttaccttaggttatgatcaattcaaatttgagcttcactttagctcctaattctccaatcttctagttttccccct 23777894  T
Q  233 ttgctaacccttgtt 247  Q
    |||||||||||||||    
T  23777893 ttgctaacccttgtt 23777879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 8 - 164
Target Start/End: Complemental strand, 24826769 - 24826615
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtttatataaattcttactcaattaagcacnnnnnnnatacaaacc 107  Q
    |||||||||| ||||||||||||||||||||||||||||||| | | |||||||||| |||| |||||| ||||||||||||||       |||||||||    
T  24826769 aattaacatactcaaacttatcaccaaaacaagagcacgaaaattagagattgggttcatatgaattctcactcaattaagcac-tttttcatacaaacc 24826671  T
Q  108 aagaaaaattgcaaaacaaacatttgtgattatgattaagactaacccccttacctt 164  Q
    |||||||||||| || |||||| || |||||||||| | |||||||||| |||||||    
T  24826670 aagaaaaattgc-aagcaaacaattatgattatgatgatgactaacccctttacctt 24826615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 15633418 - 15633474
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||    
T  15633418 aattaacatactcaaacttatcaccaaaacaagagcacgaaattcaagaattgggtt 15633474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 25265334 - 25265261
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| ||||||||||||||||| |||| | ||||| ||| ||||| |  |||||||||||||||||||    
T  25265334 tgattatgatgaagactaacccccttacattagataatgattaatccaaacctaggcttcactttagctcctaa 25265261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 233
Target Start/End: Complemental strand, 5888578 - 5888478
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaatt-ctccaatcttcaagttttcccct 232  Q
    |||||||||| || || |||||||||||||||| | ||| | |||   ||||| |||||||||||||||||||||| |  |||||||||||||| |||||    
T  5888578 tgattatgatgaaaacaaacccccttaccttagatgatgtttaatcttaacttaagcttcactttagctcctaattgcgtcaatcttcaagtttccccct 5888479  T
Q  233 t 233  Q
    |    
T  5888478 t 5888478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 233
Target Start/End: Original strand, 21142203 - 21142303
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaatt-ctccaatcttcaagttttcccct 232  Q
    |||||||||| || || |||||||||||||||| | ||| | |||   |||||  ||||||||||||||||||||| || |||||||||||||| |||||    
T  21142203 tgattatgatgaaaacaaacccccttaccttagatgatgtttaatcttaacttaggcttcactttagctcctaattgcttcaatcttcaagtttccccct 21142302  T
Q  233 t 233  Q
    |    
T  21142303 t 21142303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 207
Target Start/End: Original strand, 463044 - 463117
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||||||||| | | ||| ||| | |||||  |||||| ||||||||||||    
T  463044 tgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaa 463117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 24341340 - 24341267
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||||||||| ||||||| ||    |||||  |||||| ||||||||||||    
T  24341340 tgattatgatgaagactaacccccttaccttagattatgattaacctcaacttaggcttcattttagctcctaa 24341267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 9652953 - 9652891
Alignment:
Q  2 acatcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    ||||||||||||||||||||||| |||| | | ||||  | |||||| |||||||||||||||    
T  9652953 acatcaaattaacatattcaaacatatctctacaacataaccacgaatttcaaagattgggtt 9652891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 188 - 251
Target Start/End: Original strand, 15633592 - 15633657
Alignment:
Q  188 agcttcactttagctccta--attctccaatcttcaagttttcccctttgctaacccttgttcttc 251  Q
    ||||||||||| |||||||  ||||| |||||||||||||| ||| ||  ||||||||||||||||    
T  15633592 agcttcacttttgctcctatgattcttcaatcttcaagtttcccctttctctaacccttgttcttc 15633657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 21274106 - 21274044
Alignment:
Q  2 acatcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    ||||||||||||||||| ||||| |||| | | ||||  |||||||| |||||||||||||||    
T  21274106 acatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgggtt 21274044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 22274920 - 22274982
Alignment:
Q  2 acatcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    ||||||||||||||||||||||| |||| | |  |||  |||||||| |||||||||||||||    
T  22274920 acatcaaattaacatattcaaacatatctctaccacataagcacgaatttcaaagattgggtt 22274982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 207
Target Start/End: Original strand, 32466176 - 32466249
Alignment:
Q  133 gtgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    ||||||||||| |||||||||||| ||||||||| | | ||||||  |||||||  |||||| ||||||||||||    
T  32466176 gtgattatgatgaagactaacccc-ttaccttagataaggatcaacccaaacttaggcttcaatttagctcctaa 32466249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 7321716 - 7321777
Alignment:
Q  3 catcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    ||||||||||||||| |||||| |||||| | |||| ||||||||| ||||||  |||||||    
T  7321716 catcaaattaacatactcaaacatatcactacaacatgagcacgaatttcaaaagttgggtt 7321777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 9652827 - 9652754
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||||||||| | | ||| ||| | |||||  | |||| ||||||||||||    
T  9652827 tgattatgataaagactaacccccttaccttagatgaagattaatcccaacttaggtttcaatttagctcctaa 9652754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 207
Target Start/End: Original strand, 22863236 - 22863309
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||||||||| | | ||| ||| | |||||  ||| || ||||||||||||    
T  22863236 tgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggctgcaatttagctcctaa 22863309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 14906385 - 14906353
Alignment:
Q  134 tgattatgattaagactaacccccttaccttag 166  Q
    |||||||||| ||||||||||||||||||||||    
T  14906385 tgattatgataaagactaacccccttaccttag 14906353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 23820389 - 23820421
Alignment:
Q  134 tgattatgattaagactaacccccttaccttag 166  Q
    |||||||||| ||||||||||||||||||||||    
T  23820389 tgattatgataaagactaacccccttaccttag 23820421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 36982395 - 36982363
Alignment:
Q  134 tgattatgattaagactaacccccttaccttag 166  Q
    |||||||||| ||||||||||||||||||||||    
T  36982395 tgattatgataaagactaacccccttaccttag 36982363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 8 - 251
Target Start/End: Complemental strand, 6266 - 6022
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtttatataaattcttactcaat-taagcacnnnnnnnatacaaac 106  Q
    |||||||||| |||| |||||||||||||||||||||||||| | | |||||||||| |||| |||||| ||| ||  |||||||       ||||||||    
T  6266 aattaacatactcaatcttatcaccaaaacaagagcacgaaaattagagattgggttcatatgaattctcacttaaactaagcactttttc-atacaaac 6168  T
Q  107 caagaaaaattgcaaaacaaacatttgtgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctccta 206  Q
    |||||||||||||||| |||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6167 caagaaaaattgcaaa-caaacaattatgattatgtttaagactaacccccttaccttaggttatgatcaattcaaacttgggcttcactttagctccta 6069  T
Q  207 a-ttctccaatcttcaagttttccccttt-gctaacccttgttcttc 251  Q
    | |||| ||||||||||||||||||||||  |||||||||| |||||    
T  6068 atttcttcaatcttcaagttttcccctttctctaacccttgctcttc 6022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 119; Significance: 7e-61; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 8 - 251
Target Start/End: Original strand, 17903 - 18145
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtttatataaattcttactcaattaagcacnnnnnnnatacaaacc 107  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||       ||||||||     
T  17903 aattaacatactcaaacttatcaccaaaacaagagcacgaaattcaaagattgggttcatataaatacttactcaattaagcac-tttttcatacaaaca 18001  T
Q  108 aagaaaaattgcaaaacaaacatttgtgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    ||| |||||||||||  ||| | || |||||||||| |||||||||||||||||||||| | ||||| ||| |||||||  ||||||||||| |||||||    
T  18002 aag-aaaattgcaaacaaaataattatgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaggcttcactttaactcctaa 18100  T
Q  208 ttctccaatcttcaagttttccccttt-gctaacccttgttcttc 251  Q
    |||| ||||||||| |||| |||||||  ||||||||||||||||    
T  18101 ttcttcaatcttcatgtttccccctttctctaacccttgttcttc 18145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 8 - 251
Target Start/End: Complemental strand, 5631 - 5390
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtttatataaattcttactcaattaagcacnnnnnnnatacaaacc 107  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||||||||||||||||        |||||||     
T  5631 aattaacatactcaaacttatcaccaaaacaagagcacgaaattcaaagattagattcatataaattcttactcaattaagcactttttct-tacaaact 5533  T
Q  108 aagaaaaattgcaaaacaaacatttgtgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    ||||||| |||||||  ||||| || |||||||||| |||||||||||||||||||||||| ||||| ||| ||| |||  |||||||||||||||||||    
T  5532 aagaaaa-ttgcaaacaaaacaattatgattatgatgaagactaacccccttaccttaggtaatgattaatccaatcttaggcttcactttagctcctaa 5434  T
Q  208 ttctccaatcttcaagttttccccttt-gctaacccttgttcttc 251  Q
     ||| |||||||||||||| |||||||  ||||||||||||||||    
T  5433 -tcttcaatcttcaagtttccccctttctctaacccttgttcttc 5390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 106; Significance: 4e-53; HSPs: 4)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 134 - 251
Target Start/End: Complemental strand, 13298 - 13181
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttttcccctt 233  Q
    |||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13298 tgattatgatgataactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttttcccctt 13199  T
Q  234 tgctaacccttgttcttc 251  Q
    ||||||||||||||||||    
T  13198 tgctaacccttgttcttc 13181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 108106 - 108033
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||||||||| | | ||| ||||| |||||  |||||| || |||||||||    
T  108106 tgattatgataaagactaacccccttaccttagatgaagattaattccaacttaggcttcaattcagctcctaa 108033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 55779 - 55841
Alignment:
Q  2 acatcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    ||||||||||||||||||||||| |||  | | ||||  |||||||| |||||||||||||||    
T  55779 acatcaaattaacatattcaaacatatatctacaacataagcacgaatttcaaagattgggtt 55841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 207
Target Start/End: Original strand, 55905 - 55978
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||||||||| | | ||| ||| | || ||  |||||| ||||||||||||    
T  55905 tgattatgataaagactaacccccttaccttagataaagattaatcccaatttaggcttcaatttagctcctaa 55978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 8 - 251
Target Start/End: Complemental strand, 34463 - 34221
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtttatataaattcttactcaattaagcacnnnnnnnatacaaacc 107  Q
    |||||||||| ||||||||||||  |||||||||||||||||||||| |||| ||||  ||||||| |||||||||||||||||       ||||||||     
T  34463 aattaacatactcaaacttatcattaaaacaagagcacgaaattcaaggattaggttcgtataaatacttactcaattaagcactatttc-atacaaact 34365  T
Q  108 aagaaaaattgcaaaacaaacatttgtgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    ||||||| |||||||  ||||| || |||||||||| |||||||||||||||||||||| | ||||| ||| |||||||  |||||| ||||||||||||    
T  34364 aagaaaa-ttgcaaacaaaacaattatgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaggcttcattttagctcctaa 34266  T
Q  208 ttctccaatcttcaagttttccccttt-gctaacccttgttcttc 251  Q
    |||| ||||||| |||||| |||||||  ||||||||||||||||    
T  34265 ttcttcaatctttaagtttccccctttctctaacccttgttcttc 34221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 93; Significance: 2e-45; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 107 - 251
Target Start/End: Original strand, 20254605 - 20254749
Alignment:
Q  107 caagaaaaattgcaaaacaaacatttgtgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctccta 206  Q
    |||| |||||||||||  ||||| |  |||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  20254605 caaggaaaattgcaaacaaaacaatcatgattatgaagaacactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcata 20254704  T
Q  207 attctccaatcttcaagttttcccctttgctaacccttgttcttc 251  Q
    ||||  |||||||||||||| ||||||||||||||||||||||||    
T  20254705 attcctcaatcttcaagtttccccctttgctaacccttgttcttc 20254749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 122
Target Start/End: Complemental strand, 21650090 - 21649977
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtttatataaattcttactcaattaagcacnnnnnnnatacaaacc 107  Q
    |||||||||| |||| |||||||||||||||||||||||||| | | |||||| ||| |||| |||||| ||||||||||||||       |||||||||    
T  21650090 aattaacatactcaatcttatcaccaaaacaagagcacgaaaattagagattgagttcatatgaattctcactcaattaagcac-tttttcatacaaacc 21649992  T
Q  108 aagaaaaattgcaaa 122  Q
    |||||||||||||||    
T  21649991 aagaaaaattgcaaa 21649977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 20893582 - 20893509
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||||||||||| | ||| ||| | |||||  |||||| ||||||||||||    
T  20893582 tgattatgatgaagactaacccccttaccttaggtaaagattaatcccaacttaggcttcaatttagctcctaa 20893509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 15861483 - 15861421
Alignment:
Q  2 acatcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    ||||||||||||||||||||||| |||| | | ||||  |||||||| |||||||||||||||    
T  15861483 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggtt 15861421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 46
Target Start/End: Original strand, 20254518 - 20254556
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagcacg 46  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  20254518 aattaacatactcaaacttatcaccaaaacaagagcacg 20254556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 22367216 - 22367278
Alignment:
Q  2 acatcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    ||||||||||||||||||||||| |||| | | ||||  |||||||| |||||||||||||||    
T  22367216 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggtt 22367278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 207
Target Start/End: Original strand, 20913336 - 20913409
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||| ||| |||||||||||||||||||||| | | ||| ||| | |||||  |||||||||||||||||||    
T  20913336 tgattacgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaa 20913409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 207
Target Start/End: Original strand, 20931651 - 20931724
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| ||| |||||||||||||||||| | | ||| ||| | |||||  |||||||||||||| ||||    
T  20931651 tgattatgataaaggctaacccccttaccttagataaagattaatcccaacttaggcttcactttagctgctaa 20931724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 37844405 - 37844332
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||||||||| | |  || ||| | |||||  |||||| ||||||||||||    
T  37844405 tgattatgataaagactaacccccttaccttagataaaaattaatcccaacttaggcttcaatttagctcctaa 37844332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 107 - 251
Target Start/End: Original strand, 48478 - 48623
Alignment:
Q  107 caagaaaaattgcaaaacaaacatttgtgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctccta 206  Q
    |||| |||||||||||  |||||||  |||||||||  ||||||||||||||||| |||||||||||| |||||||| ||| ||||||||||||||||||    
T  48478 caaggaaaattgcaaacaaaacattcatgattatgaagaagactaacccccttacattaggttatgattaattcaaatttgggcttcactttagctccta 48577  T
Q  207 a-ttctccaatcttcaagttttcccctttgctaacccttgttcttc 251  Q
    | |||| |||||||||||||| ||||||||||||||||||||||||    
T  48578 atttcttcaatcttcaagtttccccctttgctaacccttgttcttc 48623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 107 - 251
Target Start/End: Complemental strand, 9470 - 9324
Alignment:
Q  107 caagaaaaattgcaaaacaaacatttgtgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctccta 206  Q
    |||| |||||||||||  ||||| |  |||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  9470 caaggaaaattgcaaacaaaacaatcatgattatgaagaagactaacccccttaccttaggttatgatcaattcaaacttgggcttcactttagctccta 9371  T
Q  207 a-ttctccaatcttcaagttttccccttt-gctaacccttgttcttc 251  Q
    | |||| |||||||||||||| |||||||  ||||||||||||||||    
T  9370 atttcttcaatcttcaagtttccccctttctctaacccttgttcttc 9324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 9558 - 9518
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagcacgaa 48  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  9558 aattaacatactcaaacttatcaccaaaacaagagcacgaa 9518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 8 - 166
Target Start/End: Complemental strand, 17364 - 17208
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtttatataaattcttactcaattaagcacnnnnnnnatacaaacc 107  Q
    |||||||||| ||| |||||||||||||||||||| |||||| | |||||||||||| ||| ||||||| ||||||||||||||       |||||||||    
T  17364 aattaacatactcatacttatcaccaaaacaagagtacgaaaattaaagattgggttcatacaaattctcactcaattaagcac-tttttcatacaaacc 17266  T
Q  108 aagaaaaattgcaaaacaaacatttgtgattatgattaagactaacccccttaccttag 166  Q
    |||||||||||| ||||||||| || |||||||||| ||||||||||||||||||||||    
T  17265 aagaaaaattgc-aaacaaacaattatgattatgatgaagactaacccccttaccttag 17208  T

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Target: scaffold0026 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 148 - 251
Target Start/End: Original strand, 108068 - 108172
Alignment:
Q  148 actaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttc-aagttttcccctttgctaacccttgt 246  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||    
T  108068 actaacccccttaccttaggctataatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaaaatttccccctttgctaacccttgt 108167  T
Q  247 tcttc 251  Q
    |||||    
T  108168 tcttc 108172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 134 - 251
Target Start/End: Original strand, 41966 - 42084
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttttcccctt 233  Q
    |||||||||| |||||||||||||||||||||||| ||||| ||| |||||||  ||||||||||||||||||||||| |||||||||||||| ||||||    
T  41966 tgattatgatgaagactaacccccttaccttaggtaatgattaatccaaacttaggcttcactttagctcctaattcttcaatcttcaagtttccccctt 42065  T
Q  234 t-gctaacccttgttcttc 251  Q
    |  ||||||||||||||||    
T  42066 tctctaacccttgttcttc 42084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 134 - 251
Target Start/End: Complemental strand, 34404 - 34286
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttt-tcccct 232  Q
    |||||||||| |  |||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |    
T  34404 tgattatgataataactaaccctcttaccttaggtaatgatcaattcaagcttgagcttcactttagctcctaattctccaatcttcaagtttctccctt 34305  T
Q  233 ttgctaacccttgttcttc 251  Q
    |  ||||||||||||||||    
T  34304 tctctaacccttgttcttc 34286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 74; Significance: 5e-34; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 107 - 251
Target Start/End: Complemental strand, 49810 - 49665
Alignment:
Q  107 caagaaaaattgcaaaacaaacatttgtgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctccta 206  Q
    |||| |||||||||||  ||||| |  |||||||||  |||||||||||||||||||||||| ||||| ||| |||||||  ||||||||||||||||||    
T  49810 caaggaaaattgcaaacaaaacaatcatgattatgaagaagactaacccccttaccttaggtaatgattaatccaaacttaggcttcactttagctccta 49711  T
Q  207 attctccaatcttcaagttttccccttt-gctaacccttgttcttc 251  Q
    ||||| |||||||||||||| |||||||  ||||||||||||||||    
T  49710 attcttcaatcttcaagtttccccctttctctaacccttgttcttc 49665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 46
Target Start/End: Complemental strand, 49898 - 49860
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagcacg 46  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  49898 aattaacatactcaaacttatcaccaaaacaagagcacg 49860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 134 - 251
Target Start/End: Complemental strand, 7126 - 7008
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttt-tcccct 232  Q
    |||||||||  || ||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||||| |||||||||||||| |||| |    
T  7126 tgattatgaagaacactaacccccttaccttaggttatgattaattcaaatttaagcttcactttagctcctaattcttcaatcttcaagtttctccctt 7027  T
Q  233 ttgctaacccttgttcttc 251  Q
    |  ||||||||||||||||    
T  7026 tctctaacccttgttcttc 7008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 68; Significance: 2e-30; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 107 - 226
Target Start/End: Complemental strand, 164929 - 164810
Alignment:
Q  107 caagaaaaattgcaaaacaaacatttgtgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctccta 206  Q
    |||| |||||||||||  ||||| |  |||||||||  || ||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||    
T  164929 caaggaaaattgcaaacaaaacaatcatgattatgaagaacactaacccccttaccttaggttatgattaattcaaatttaagcttcactttagctccta 164830  T
Q  207 attctccaatcttcaagttt 226  Q
    ||||| ||||||||||||||    
T  164829 attcttcaatcttcaagttt 164810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 207
Target Start/End: Original strand, 172211 - 172284
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||||||||| | | ||| ||| | |||||  |||||||||||||||||||    
T  172211 tgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaa 172284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 207
Target Start/End: Original strand, 177914 - 177987
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||||||||| | | ||| ||| | |||||  |||||||||||||||||||    
T  177914 tgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaa 177987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 165016 - 164976
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagcacgaa 48  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  165016 aattaacatactcaaacttatcaccaaaacaagagcacgaa 164976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 134 - 251
Target Start/End: Complemental strand, 4377 - 4258
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcct-aattctccaatcttcaagttttcccct 232  Q
    |||||||||| ||| |||||||||||||||||||| ||||| ||| |||||||  ||||||||||||||||| ||| || |||||||||||||| |||||    
T  4377 tgattatgataaagtctaacccccttaccttaggtaatgattaatccaaacttttgcttcactttagctcctaaatccttcaatcttcaagtttacccct 4278  T
Q  233 tt-gctaacccttgttcttc 251  Q
    ||  ||||||||||||||||    
T  4277 ttctctaacccttgttcttc 4258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0303; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 85 - 23
Alignment:
Q  2 acatcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    ||||||||||||||||||||||| |||| | | ||||  |||||||| |||||||||||||||    
T  85 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggtt 23  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 107 - 251
Target Start/End: Original strand, 95272 - 95418
Alignment:
Q  107 caagaaaaattgcaaaacaaacatttgtgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcct- 205  Q
    |||| |||||||||||  ||||| |  |||||||||  |||||||||||||||||||||||| ||||| ||| ||||| |  |||||||||||||||||     
T  95272 caaggaaaattgcaaacaaaacaatcatgattatgaagaagactaacccccttaccttaggtaatgattaatccaaacctaggcttcactttagctccta 95371  T
Q  206 aattctccaatcttcaagttt-tcccctttgctaacccttgttcttc 251  Q
    ||| || |||||||||||||| |||| ||  ||||||||||||||||    
T  95372 aatccttcaatcttcaagtttctccctttctctaacccttgttcttc 95418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 95183 - 95223
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagcacgaa 48  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  95183 aattaacatactcaaacttatcaccaaaacaagagcacgaa 95223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 251
Target Start/End: Original strand, 3525 - 3622
Alignment:
Q  154 ccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaattctccaatcttcaagttttccccttt-gctaacccttgttcttc 251  Q
    ||||||||||||| | ||||| |||||||||||  ||||||||||||||||||| ||| |||||||||||||| |||||||  ||||||||||||||||    
T  3525 ccccttaccttagatgatgattaattcaaacttaggcttcactttagctcctaa-tcttcaatcttcaagtttccccctttctctaacccttgttcttc 3622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 134 - 251
Target Start/End: Original strand, 45339 - 45458
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa-ttctccaatcttcaagttttcccct 232  Q
    |||||||||| |||||||||||||||||||||| | ||| | ||| |||||||  |||||| || |||||||||  ||| |||||||||||||| |||||    
T  45339 tgattatgatgaagactaacccccttaccttagataatggttaatccaaacttaggcttcaattaagctcctaagctcttcaatcttcaagtttccccct 45438  T
Q  233 tt-gctaacccttgttcttc 251  Q
    ||  ||||||||||||||||    
T  45439 ttctctaacccttgttcttc 45458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 134 - 251
Target Start/End: Original strand, 54725 - 54844
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa-ttctccaatcttcaagttttcccct 232  Q
    |||||||||| |||||||||| ||||||||||| | ||| | ||| ||||||| ||||||| || |||||||||  ||| |||||||||||||| || ||    
T  54725 tgattatgatgaagactaaccaccttaccttagataatggttaatccaaacttaagcttcaattaagctcctaagctcttcaatcttcaagtttcccact 54824  T
Q  233 tt-gctaacccttgttcttc 251  Q
    ||  ||||||||||||||||    
T  54825 ttctctaacccttgttcttc 54844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 207
Target Start/End: Original strand, 338 - 412
Alignment:
Q  133 gtgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    ||||||||||| |||||||||||||||||||||| | | ||| ||| |||||||  |||||| ||||||||||||    
T  338 gtgattatgatgaagactaacccccttaccttagataaggattaatccaaacttaggcttcaatttagctcctaa 412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 226
Target Start/End: Complemental strand, 12075 - 11982
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaatt-ctccaatcttcaagttt 226  Q
    |||||||||| |  ||||||||||||||||||| | ||| | ||||  |||||  ||||||||||||||||||||| || ||||||||||||||    
T  12075 tgattatgataataactaacccccttaccttagatgatgtttaattttaacttaggcttcactttagctcctaattgcttcaatcttcaagttt 11982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 1557 - 1496
Alignment:
Q  3 catcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    ||||||||||||||| |||||| |||||| | |||| ||||||||| |||||||||||||||    
T  1557 catcaaattaacatactcaaacatatcactacaacatgagcacgaatttcaaagattgggtt 1496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 207
Target Start/End: Original strand, 9184 - 9257
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||||||||| | | ||| ||| | |||||  |||||||||||||||||||    
T  9184 tgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaa 9257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 13316 - 13243
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||||||||| | | ||| ||| | |||||  |||||||||||||||||||    
T  13316 tgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaa 13243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 13443 - 13381
Alignment:
Q  2 acatcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    ||||||||||||||||| ||||| |||| | | ||||  |||||||| |||||||||||||||    
T  13443 acatcaaattaacatatccaaacatatctctacaacataagcacgaatttcaaagattgggtt 13381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 38; Significance: 0.000000000001; HSPs: 4)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 207
Target Start/End: Original strand, 12064 - 12137
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||| ||||| | ||||| ||| |||||||  |||||| ||||||||||||    
T  12064 tgattatgatgaagactaacccccttatcttagataatgattaatccaaactttggcttcaatttagctcctaa 12137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 11949 - 11992
Alignment:
Q  8 aattaacatattcaaacttatcaccaaaacaagagcacgaaatt 51  Q
    |||||||||| ||||||||||||||||||||| |||||||||||    
T  11949 aattaacatactcaaacttatcaccaaaacaatagcacgaaatt 11992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 206
Target Start/End: Complemental strand, 8124 - 8051
Alignment:
Q  134 tgattatgattaagactaaccccc-ttaccttaggttatgatcaattcaaacttgagcttcactttagctccta 206  Q
    |||||||||| ||||||||||||| ||||||||| | ||||| ||| |||||||  |||||| |||||||||||    
T  8124 tgattatgatgaagactaaccccccttaccttagataatgattaatccaaacttaggcttcattttagctccta 8051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 26371 - 26298
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||||||||| | | ||| ||| | | |||  |||||| ||||||||||||    
T  26371 tgattatgataaagactaacccccttaccttagatgaagattaatcccatcttaggcttcaatttagctcctaa 26298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 199
Target Start/End: Original strand, 13825 - 13890
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcacttta 199  Q
    |||||||||| |||||||||||||||||||||| | ||||| ||| |||||||  |||||||||||    
T  13825 tgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaggcttcacttta 13890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 6601 - 6538
Alignment:
Q  1 gacatcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    |||||||||||||||||||||||| |||| | | ||||  |||||||| |||||||||||||||    
T  6601 gacatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggtt 6538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 6474 - 6401
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||||||||| | | ||  ||| | |||||  |||||| ||||||||||||    
T  6474 tgattatgataaagactaacccccttaccttagataaggaataatcccaacttaggcttcaatttagctcctaa 6401  T

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Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 205
Target Start/End: Original strand, 272331 - 272402
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcct 205  Q
    |||||||||| |||||||||||||||||||||| | | ||| ||| | |||||  |||||||||||||||||    
T  272331 tgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcct 272402  T

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Target: scaffold0465 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 10040 - 9978
Alignment:
Q  2 acatcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    ||||||||||||||||||||||| |||| | | ||||  |||||||| |||||||||||||||    
T  10040 acatcaaattaacatattcaaacatatctctacaacataagcacgaatttcaaagattgggtt 9978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 9913 - 9840
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||||||||| | | ||| ||| | |||||  |||||| ||||||||||||    
T  9913 tgattatgataaagactaacccccttaccttagatgaagattaatcccaacttaggcttcaatttagctcctaa 9840  T

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Target: scaffold0158 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 133 - 207
Target Start/End: Original strand, 25531 - 25605
Alignment:
Q  133 gtgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    ||||||||||| |||||||||||||||||||||| | | ||| ||  |||||||  |||||| ||||||||||||    
T  25531 gtgattatgatgaagactaacccccttaccttagataaggattaacccaaacttaggcttcaatttagctcctaa 25605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1295 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold1295
Description:

Target: scaffold1295; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 305 - 366
Alignment:
Q  3 catcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    ||||||||||||||| |||||| |||||| | |||| ||||| ||| |||||||||||||||    
T  305 catcaaattaacatactcaaacatatcactacaacatgagcaagaatttcaaagattgggtt 366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 909 - 836
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||||||||| | | ||| ||| | |||||  |||||| ||||||||||||    
T  909 tgattatgataaagactaacccccttaccttagatgaagattaatcccaacttaggcttcaatttagctcctaa 836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 207
Target Start/End: Original strand, 12419 - 12492
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||||||||| |   ||| ||| | |||||  |||||||||||||||||||    
T  12419 tgattatgataaagactaacccccttaccttagatagagattaatcctaacttaggcttcactttagctcctaa 12492  T

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Target: scaffold0266 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 207
Target Start/End: Original strand, 1431 - 1504
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||||||||| | | ||| |||   |||||  |||||||||||||||||||    
T  1431 tgattatgataaagactaacccccttaccttagataaagattaatcacaacttaggcttcactttagctcctaa 1504  T

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Target: scaffold0266; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 3539 - 3466
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||  |||||||||||||||||||||| | | ||| ||| | |||||  |||||||||||||||||||    
T  3539 tgattatgacaaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaa 3466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 44170 - 44109
Alignment:
Q  3 catcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    ||||||||||||||| |||||| |||||| | |||| ||||||||| |||||||||| ||||    
T  44170 catcaaattaacatactcaaacatatcactacaacatgagcacgaatttcaaagattaggtt 44109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 57423 - 57350
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||||||||| | | ||| ||| | |||||  |||||||||||||| ||||    
T  57423 tgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctactaa 57350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 207
Target Start/End: Original strand, 146907 - 146980
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||||||||| | | ||| ||| | |||||  |||||| ||||||||||||    
T  146907 tgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaa 146980  T

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Target: scaffold0025; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 207
Target Start/End: Original strand, 9161 - 9234
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| ||||||||| | |||||||||| ||||||| ||    |||||  |||||||||||||||||||    
T  9161 tgattatgatgaagactaacacacttaccttagattatgattaacctcaacttaggcttcactttagctcctaa 9234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 247397 - 247324
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||||||||| | | ||| ||| | |||||  |||||| ||||||||||||    
T  247397 tgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaa 247324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 34106 - 34033
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||||||||| | | ||| ||  ||||||   |||||| ||||||||||||    
T  34106 tgattatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaatttagctcctaa 34033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 123118 - 123045
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||| | |||||||||||||||||||||||| | ||| ||| | |||||  |||||| ||||||||||||    
T  123118 tgattatggtgaagactaacccccttaccttaggtaaagattaatcccaacttaggcttcaatttagctcctaa 123045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 193428 - 193355
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaa 207  Q
    |||||||||| |||||||||||||||||||||  | | ||| ||| | |||||  |||||||||||||||||||    
T  193428 tgattatgataaagactaacccccttaccttaaatgaagattaatcccaacttaggcttcactttagctcctaa 193355  T

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Target: scaffold0003 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 233
Target Start/End: Original strand, 7517 - 7617
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaatt-ctccaatcttcaagttttcccct 232  Q
    |||||||||| || || |||||||||||||||| | ||| | |||   ||||  ||||||||||||||||||||||  | |||||||||||||| |||||    
T  7517 tgattatgatgaaaacaaacccccttaccttagatgatgtttaatcttaactaaagcttcactttagctcctaattgtttcaatcttcaagtttccccct 7616  T
Q  233 t 233  Q
    |    
T  7617 t 7617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 226
Target Start/End: Complemental strand, 9282 - 9203
Alignment:
Q  148 actaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaatt-ctccaatcttcaagttt 226  Q
    ||||||||||||||||||| | ||| | |||   |||||  ||||||||||||||||||||| || ||||||||||||||    
T  9282 actaacccccttaccttagatgatgtttaatcttaacttaggcttcactttagctcctaattgcttcaatcttcaagttt 9203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 226
Target Start/End: Complemental strand, 16180 - 16101
Alignment:
Q  148 actaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaatt-ctccaatcttcaagttt 226  Q
    ||||||||||||||||||| | ||| | |||   |||||  ||||||||||||||||||||| || ||||||||||||||    
T  16180 actaacccccttaccttagatgatgtttaatcttaacttaggcttcactttagctcctaattgcttcaatcttcaagttt 16101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 6140 - 6078
Alignment:
Q  2 acatcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    |||||||||||||||||||||||  ||| | | ||||  |||||||| |||||||||||||||    
T  6140 acatcaaattaacatattcaaacacatctctacaacataagcacgaatttcaaagattgggtt 6078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 15147 - 15209
Alignment:
Q  2 acatcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    ||||||||||||||||||||||| |||| | |  |||  |||||||| |||||||||||||||    
T  15147 acatcaaattaacatattcaaacatatctctacgacataagcacgaatttcaaagattgggtt 15209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 913 - 881
Alignment:
Q  134 tgattatgattaagactaacccccttaccttag 166  Q
    |||||||||| ||||||||||||||||||||||    
T  913 tgattatgataaagactaacccccttaccttag 881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 208
Target Start/End: Complemental strand, 128126 - 128052
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaat 208  Q
    |||||||||| |||||||||||||||||||||| | | ||| ||| | |||||  |||||| |||| ||||||||    
T  128126 tgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcattttatctcctaat 128052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 12574 - 12513
Alignment:
Q  3 catcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    |||||||||||||||||||||| |||| | | ||||  ||||| || |||||||||||||||    
T  12574 catcaaattaacatattcaaacatatctctacaacataagcacaaatttcaaagattgggtt 12513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 226
Target Start/End: Original strand, 54182 - 54275
Alignment:
Q  134 tgattatgattaagactaacccccttaccttaggttatgatcaattcaaacttgagcttcactttagctcctaatt-ctccaatcttcaagttt 226  Q
    |||||||||| || || |||||||||||||||| | ||| | |||   |||||  |||||||| |||||||||||| || ||||||||||||||    
T  54182 tgattatgatgaaaacaaacccccttaccttagatgatgtttaatcttaacttaggcttcactatagctcctaattgcttcaatcttcaagttt 54275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 6021 - 5989
Alignment:
Q  134 tgattatgattaagactaacccccttaccttag 166  Q
    |||||||||| ||||||||||||||||||||||    
T  6021 tgattatgataaagactaacccccttaccttag 5989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 22858 - 22890
Alignment:
Q  134 tgattatgattaagactaacccccttaccttag 166  Q
    |||||||||| ||||||||||||||||||||||    
T  22858 tgattatgataaagactaacccccttaccttag 22890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Original strand, 27113 - 27145
Alignment:
Q  134 tgattatgattaagactaacccccttaccttag 166  Q
    |||||||||| ||||||||||||||||||||||    
T  27113 tgattatgataaagactaacccccttaccttag 27145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 1527 - 1495
Alignment:
Q  134 tgattatgattaagactaacccccttaccttag 166  Q
    |||||||||| ||||||||||||||||||||||    
T  1527 tgattatgataaagactaacccccttaccttag 1495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 166
Target Start/End: Complemental strand, 37011 - 36979
Alignment:
Q  134 tgattatgattaagactaacccccttaccttag 166  Q
    |||||||||| ||||||||||||||||||||||    
T  37011 tgattatgataaagactaacccccttaccttag 36979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 162233 - 162173
Alignment:
Q  4 atcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    |||||||||||||||||||||  ||| | | ||||  |||||||| |||||||||||||||    
T  162233 atcaaattaacatattcaaacacatctctacaacataagcacgaatttcaaagattgggtt 162173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 166319 - 166259
Alignment:
Q  4 atcaaattaacatattcaaacttatcaccaaaacaagagcacgaaattcaaagattgggtt 64  Q
    |||||||||||||||||||||  ||| | | ||||  |||||||| |||||||||||||||    
T  166319 atcaaattaacatattcaaacacatctctacaacataagcacgaatttcaaagattgggtt 166259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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