View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10279_high_6 (Length: 227)
Name: NF10279_high_6
Description: NF10279
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10279_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 47 - 224
Target Start/End: Complemental strand, 48656013 - 48655835
Alignment:
| Q |
47 |
ccgttatcccccatctaccacaccctccaccctctctcgccactgtcgcccatcgaccacaccctcgatcaccacaacccttgcccttcgccctaccata |
146 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48656013 |
ccgtcatcccccatctaccacaccctccaccctctctcgccactgtcgcccatcgaccacaccctcgatcaccacaacccttgcccttcgccctaccata |
48655914 |
T |
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| Q |
147 |
tcttcatatcgcaccaacagatccacaccc-nnnnnnncccttatgttctccttccattgccaccaccacctatgcttc |
224 |
Q |
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|||||||||| ||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |
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| T |
48655913 |
tcttcatatcacaccagcagatccacacccaaaaaaaaaccttatgttctccttccattgccgccaccacctatgcttc |
48655835 |
T |
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