View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10281_low_13 (Length: 342)
Name: NF10281_low_13
Description: NF10281
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10281_low_13 |
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Alignment Details
Target: chr4 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 13 - 325
Target Start/End: Original strand, 21725480 - 21725801
Alignment:
| Q |
13 |
gacatcaaacatgtaaataagttaggaaagctttcaaccaccgtagaatttgatcgtaaaaccaagtggtcgtcttaatattcaattaaataatttatca |
112 |
Q |
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| T |
21725480 |
gacatcaaacatgtaaataagctaggaaaactttcaaccaccgtagaatttgatcgtaaaatcaagtggtcgtcttaatatttaattaaataatttatca |
21725579 |
T |
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| Q |
113 |
ttacggaggacataaacatatgataatcttcaaaaagtaaaccaatctgaaaaatgcctattcaaattaataaatacatagcaaaaacttccatcgcaaa |
212 |
Q |
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| T |
21725580 |
ttacggaggacataaacatatgataatcttcaaaaagtaaaccaatctgaaaaatgcctattcaaattaataaatacatagcaaaaacttccatcgcaaa |
21725679 |
T |
|
| Q |
213 |
aagacaa-taaccataacttcctttgaaatttgaattcaaatctacaaaaacacaaaaagctataaatttattggattcttttc--------ttcataaa |
303 |
Q |
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||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||| |
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| T |
21725680 |
aagacaattaaccataacttcctttgaaatttgaattcaaatctacaaaaacacaaaaaactaaaaatttattggattcttttcttccttttttcataaa |
21725779 |
T |
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| Q |
304 |
attttcagtaatctgattatac |
325 |
Q |
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|||||||||||||||||||||| |
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| T |
21725780 |
attttcagtaatctgattatac |
21725801 |
T |
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