View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10281_low_24 (Length: 242)
Name: NF10281_low_24
Description: NF10281
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10281_low_24 |
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Alignment Details
Target: chr6 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 33592622 - 33592846
Alignment:
| Q |
1 |
ttactgtgagtattatcatatatgggggtataagtggtttaattgaaaccaataaacttttagatatgagtgtgttggtacgattttttgaaacaacggt |
100 |
Q |
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| T |
33592622 |
ttactgtgagtattatcatatatgggggtataagtggtttaattgaaaccaataaacttttagatatgagtgtgttggtacgattttttgaaacaacggt |
33592721 |
T |
|
| Q |
101 |
ttacattcattcaagatccagaacatggaaagcaagataaatgtttctaaaacaagctttattttttgacagaaaatttcaagaaaggtgagtttatact |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
33592722 |
ttacattcattcaagatccagaacatggaaagcaagataaatgtttctaaaacaagctttattttttgacagaaaattacaagaaaggtgagtttatact |
33592821 |
T |
|
| Q |
201 |
ctagagttcacttcaatatgaagaa |
225 |
Q |
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||||| ||||||||||||||||||| |
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| T |
33592822 |
ctagatttcacttcaatatgaagaa |
33592846 |
T |
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