View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10282_low_6 (Length: 368)

Name: NF10282_low_6
Description: NF10282
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10282_low_6
NF10282_low_6
[»] chr6 (20 HSPs)
chr6 (81-321)||(28953836-28954076)
chr6 (18-82)||(8796246-8796310)
chr6 (19-83)||(22020474-22020538)
chr6 (18-84)||(18992100-18992166)
chr6 (18-83)||(25435608-25435673)
chr6 (18-82)||(7097873-7097937)
chr6 (18-82)||(11114762-11114826)
chr6 (18-82)||(31855015-31855079)
chr6 (18-84)||(30237364-30237430)
chr6 (18-83)||(20662058-20662123)
chr6 (18-82)||(643431-643495)
chr6 (18-82)||(16696016-16696080)
chr6 (18-82)||(24150938-24151002)
chr6 (18-82)||(25163361-25163425)
chr6 (82-135)||(28989834-28989887)
chr6 (42-82)||(29979024-29979064)
chr6 (18-82)||(33121739-33121803)
chr6 (47-82)||(24825391-24825426)
chr6 (47-84)||(31854816-31854853)
chr6 (18-82)||(13206953-13207017)
[»] chr8 (27 HSPs)
chr8 (18-82)||(30380727-30380791)
chr8 (18-83)||(3293100-3293165)
chr8 (18-80)||(38845804-38845866)
chr8 (18-82)||(8350880-8350944)
chr8 (18-82)||(37710096-37710160)
chr8 (18-84)||(2986522-2986588)
chr8 (18-84)||(23249049-23249115)
chr8 (18-83)||(14522576-14522641)
chr8 (18-79)||(40013848-40013909)
chr8 (18-82)||(6471042-6471106)
chr8 (18-82)||(30290121-30290185)
chr8 (18-82)||(43066323-43066387)
chr8 (18-82)||(2805476-2805540)
chr8 (18-82)||(18809473-18809537)
chr8 (18-82)||(29791139-29791203)
chr8 (18-82)||(38739854-38739918)
chr8 (20-82)||(45082011-45082073)
chr8 (18-83)||(13138131-13138196)
chr8 (18-82)||(31127805-31127869)
chr8 (18-78)||(10658174-10658234)
chr8 (18-82)||(12893725-12893789)
chr8 (18-74)||(39361322-39361378)
chr8 (18-53)||(45253943-45253978)
chr8 (18-82)||(1580768-1580829)
chr8 (18-72)||(6470624-6470678)
chr8 (29-82)||(3383616-3383669)
chr8 (47-83)||(38842389-38842425)
[»] chr4 (40 HSPs)
chr4 (18-84)||(1377228-1377294)
chr4 (18-83)||(5744082-5744147)
chr4 (18-82)||(7738819-7738883)
chr4 (18-84)||(46212348-46212414)
chr4 (18-82)||(4264331-4264395)
chr4 (18-82)||(6494787-6494851)
chr4 (18-82)||(18359973-18360037)
chr4 (18-82)||(19652256-19652320)
chr4 (18-82)||(36602891-36602955)
chr4 (18-84)||(3443385-3443451)
chr4 (18-84)||(28152188-28152254)
chr4 (18-82)||(3442344-3442408)
chr4 (18-82)||(3901139-3901203)
chr4 (18-82)||(4209556-4209620)
chr4 (18-82)||(5735468-5735532)
chr4 (18-82)||(39260132-39260196)
chr4 (18-82)||(45198340-45198404)
chr4 (18-82)||(47579483-47579547)
chr4 (18-82)||(55190566-55190630)
chr4 (18-77)||(5123162-5123221)
chr4 (18-84)||(20678586-20678652)
chr4 (18-84)||(21858917-21858983)
chr4 (18-84)||(21914780-21914846)
chr4 (18-82)||(23603647-23603711)
chr4 (18-82)||(26205704-26205768)
chr4 (18-82)||(46803829-46803893)
chr4 (18-79)||(19525717-19525778)
chr4 (18-75)||(49768642-49768699)
chr4 (18-82)||(25644556-25644620)
chr4 (18-82)||(28166471-28166535)
chr4 (18-82)||(37688033-37688097)
chr4 (18-83)||(19170538-19170603)
chr4 (18-82)||(6922940-6923004)
chr4 (18-82)||(39786357-39786421)
chr4 (18-82)||(40250774-40250838)
chr4 (23-75)||(42187007-42187059)
chr4 (18-77)||(19633854-19633913)
chr4 (20-60)||(23256134-23256174)
chr4 (19-51)||(9965437-9965469)
chr4 (47-83)||(28898872-28898908)
[»] chr2 (34 HSPs)
chr2 (18-84)||(42038720-42038786)
chr2 (18-82)||(7442891-7442955)
chr2 (18-83)||(27559772-27559837)
chr2 (18-82)||(34827109-34827173)
chr2 (19-83)||(44330582-44330646)
chr2 (18-83)||(32775902-32775967)
chr2 (18-82)||(4045233-4045297)
chr2 (18-82)||(9877083-9877147)
chr2 (18-82)||(18718436-18718500)
chr2 (18-82)||(41172757-41172821)
chr2 (18-80)||(44283281-44283343)
chr2 (18-82)||(14372274-14372338)
chr2 (18-82)||(14707535-14707599)
chr2 (18-82)||(23671573-23671637)
chr2 (18-82)||(40425249-40425313)
chr2 (19-82)||(41463517-41463580)
chr2 (18-83)||(20517615-20517680)
chr2 (18-75)||(30708925-30708982)
chr2 (18-82)||(3987232-3987296)
chr2 (18-82)||(39418020-39418084)
chr2 (19-82)||(13399105-13399168)
chr2 (18-84)||(4083404-4083470)
chr2 (18-76)||(36198957-36199015)
chr2 (18-82)||(332471-332535)
chr2 (18-82)||(24282960-24283024)
chr2 (18-82)||(38963716-38963780)
chr2 (19-83)||(42020202-42020266)
chr2 (18-82)||(43925074-43925138)
chr2 (18-76)||(4046046-4046104)
chr2 (47-84)||(20682868-20682905)
chr2 (48-84)||(11277761-11277797)
chr2 (48-84)||(20917727-20917763)
chr2 (47-83)||(40471962-40471998)
chr2 (47-83)||(41575788-41575824)
[»] chr7 (25 HSPs)
chr7 (18-82)||(4612087-4612151)
chr7 (18-84)||(31466356-31466422)
chr7 (18-82)||(19072966-19073030)
chr7 (18-82)||(47713502-47713566)
chr7 (18-82)||(31110822-31110886)
chr7 (18-82)||(36905723-36905787)
chr7 (18-82)||(48531519-48531583)
chr7 (18-84)||(36819893-36819959)
chr7 (18-82)||(23473969-23474033)
chr7 (18-82)||(47081177-47081241)
chr7 (18-84)||(34478006-34478072)
chr7 (18-82)||(10464115-10464179)
chr7 (18-82)||(37950945-37951009)
chr7 (18-83)||(28185410-28185475)
chr7 (18-82)||(2400482-2400546)
chr7 (18-82)||(35500747-35500811)
chr7 (18-82)||(36859208-36859272)
chr7 (18-82)||(37231563-37231627)
chr7 (18-82)||(42086638-42086702)
chr7 (18-82)||(42834292-42834356)
chr7 (22-82)||(47538124-47538184)
chr7 (18-79)||(21392215-21392276)
chr7 (18-83)||(32618941-32619006)
chr7 (18-55)||(44479748-44479785)
chr7 (23-82)||(24151581-24151640)
[»] chr5 (29 HSPs)
chr5 (18-82)||(32002014-32002078)
chr5 (18-82)||(39894978-39895042)
chr5 (18-82)||(32334638-32334702)
chr5 (18-84)||(5364621-5364687)
chr5 (18-82)||(5212922-5212986)
chr5 (18-82)||(29627465-29627529)
chr5 (18-83)||(40512679-40512744)
chr5 (18-82)||(35447997-35448061)
chr5 (18-82)||(42148504-42148568)
chr5 (18-84)||(35290483-35290549)
chr5 (18-84)||(38698160-38698226)
chr5 (18-84)||(39036607-39036673)
chr5 (18-83)||(37843574-37843639)
chr5 (18-82)||(4299833-4299897)
chr5 (18-82)||(14475230-14475294)
chr5 (18-82)||(22613709-22613773)
chr5 (18-85)||(4924835-4924902)
chr5 (18-83)||(43517059-43517124)
chr5 (18-82)||(970335-970399)
chr5 (18-82)||(16048282-16048346)
chr5 (18-82)||(23988774-23988838)
chr5 (18-77)||(37516342-37516401)
chr5 (18-82)||(39405961-39406025)
chr5 (18-82)||(43067418-43067482)
chr5 (18-75)||(25563697-25563754)
chr5 (47-84)||(31190978-31191015)
chr5 (18-82)||(1830852-1830916)
chr5 (18-82)||(41411157-41411221)
chr5 (47-83)||(42148306-42148342)
[»] chr3 (31 HSPs)
chr3 (18-82)||(54840128-54840192)
chr3 (18-82)||(10571144-10571208)
chr3 (18-82)||(21907193-21907257)
chr3 (18-82)||(38833860-38833924)
chr3 (18-82)||(45167496-45167560)
chr3 (18-82)||(48706846-48706910)
chr3 (18-84)||(51062587-51062653)
chr3 (18-84)||(53066567-53066633)
chr3 (18-82)||(29728098-29728162)
chr3 (18-85)||(8559002-8559069)
chr3 (19-82)||(34827451-34827514)
chr3 (18-82)||(7459820-7459884)
chr3 (18-82)||(18659249-18659313)
chr3 (18-82)||(32951136-32951200)
chr3 (21-82)||(46483748-46483809)
chr3 (18-82)||(37833097-37833161)
chr3 (18-82)||(52668486-52668550)
chr3 (18-75)||(1327509-1327566)
chr3 (18-79)||(47638252-47638313)
chr3 (18-82)||(17053061-17053125)
chr3 (18-82)||(32285176-32285240)
chr3 (31-82)||(10435329-10435380)
chr3 (18-73)||(38492248-38492303)
chr3 (31-84)||(27849146-27849199)
chr3 (18-82)||(3547420-3547484)
chr3 (18-82)||(4238494-4238558)
chr3 (18-78)||(36665215-36665275)
chr3 (18-82)||(54673975-54674039)
chr3 (18-84)||(49058053-49058119)
chr3 (18-68)||(43138048-43138098)
chr3 (47-84)||(21906994-21907031)
[»] chr1 (29 HSPs)
chr1 (18-82)||(32988349-32988413)
chr1 (18-82)||(1849898-1849962)
chr1 (18-82)||(38458927-38458991)
chr1 (18-84)||(29162040-29162106)
chr1 (18-83)||(49805251-49805316)
chr1 (18-82)||(25531975-25532039)
chr1 (18-82)||(37281289-37281353)
chr1 (18-82)||(50539457-50539521)
chr1 (18-84)||(30529048-30529114)
chr1 (18-83)||(50876561-50876626)
chr1 (18-82)||(3898571-3898635)
chr1 (18-82)||(4605196-4605260)
chr1 (18-82)||(16265230-16265294)
chr1 (18-82)||(16266359-16266423)
chr1 (18-82)||(26441831-26441895)
chr1 (18-82)||(42708697-42708761)
chr1 (18-82)||(43680267-43680331)
chr1 (18-82)||(45234849-45234913)
chr1 (18-82)||(48264811-48264875)
chr1 (18-82)||(52379186-52379250)
chr1 (18-82)||(39354264-39354328)
chr1 (22-80)||(48219644-48219702)
chr1 (18-82)||(23569674-23569738)
chr1 (18-82)||(24982548-24982612)
chr1 (18-81)||(21034530-21034593)
chr1 (18-82)||(41501607-41501671)
chr1 (18-76)||(47222412-47222470)
chr1 (47-84)||(41855527-41855564)
chr1 (18-82)||(50481473-50481537)
[»] scaffold0007 (1 HSPs)
scaffold0007 (18-82)||(15216-15280)
[»] scaffold0459 (1 HSPs)
scaffold0459 (18-74)||(12949-13005)
[»] scaffold0366 (2 HSPs)
scaffold0366 (18-74)||(10590-10646)
scaffold0366 (18-74)||(14256-14312)
[»] scaffold0051 (1 HSPs)
scaffold0051 (19-82)||(41217-41280)
[»] scaffold0092 (1 HSPs)
scaffold0092 (18-75)||(44115-44172)
[»] scaffold0027 (2 HSPs)
scaffold0027 (18-79)||(117518-117579)
scaffold0027 (47-83)||(117320-117356)
[»] scaffold0604 (1 HSPs)
scaffold0604 (30-82)||(1317-1369)
[»] scaffold0340 (1 HSPs)
scaffold0340 (18-82)||(14535-14599)


Alignment Details
Target: chr6 (Bit Score: 229; Significance: 1e-126; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 81 - 321
Target Start/End: Original strand, 28953836 - 28954076
Alignment:
Q  81 taatgcattcattggagttttcaattgaattatttgcagcgagtccaatcattgggataaattatggttgctttttcttcatttgagataaataaattta 180  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28953836 taatgcattcattggagttttcaattgaattatttacagcgagtccaatcattgggataaattatggttgctttttcttcatttgagataaataaattta 28953935  T
Q  181 caactctataaagttaagcatacctatgaatcttaatgtgattaatgattagtattttatagtaaaacaatgtttgtaacttttatgcagggtatcctag 280  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28953936 caactctataaagttaagcatacctatgaatcttaatgtgattaatgattagtattttatagtaaaacaatgtttgtaacttttatgcagggtatcctag 28954035  T
Q  281 ttttcttaatgtgattaatgattatagtaaaaacctatgct 321  Q
    |  ||||||||||||||||||||||||||||||||||||||    
T  28954036 taatcttaatgtgattaatgattatagtaaaaacctatgct 28954076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 8796246 - 8796310
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  8796246 caaagtatgttaagtcaataatgtatattgtcaactgggtcatttattaagggacggagggagta 8796310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 22020474 - 22020538
Alignment:
Q  19 aaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagtaa 83  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  22020474 aaagtatgtcaagtcaataatgtatattgtcaactgggtcatttaataagggacggagggagtaa 22020538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 18992100 - 18992166
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagtaat 84  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||||    
T  18992100 caaagtatgtcaagtcaataatgtatattgtcaactaggtcatttattaagggacggagcgagtaat 18992166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 25435608 - 25435673
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagtaa 83  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  25435608 caaagtatgtcaaatcaataatgtatattgtcaactgggtcatttattaagggacggagagagtaa 25435673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 7097937 - 7097873
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  7097937 caaagtatgttaagtcaataatctatattgtcaactgaatcatttattaagggacggagggagta 7097873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 11114762 - 11114826
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  11114762 caaaatatgtcaaatcaataatgtatattgtcaactggatcatttattaagagacggagggagta 11114826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 31855015 - 31855079
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    ||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||    
T  31855015 caaagtatgtcaagtcaataacgtatattgtcaactgagtcatttattaagggacggagggagta 31855079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 30237364 - 30237430
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagtaat 84  Q
    ||||||||||||||||||||||||||||||||||||   ||||||||||||||||| ||||||||||    
T  30237364 caaagtatgtcaagtcaataatgtatattgtcaactatgtcatttattaagggacgaagggagtaat 30237430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 20662123 - 20662058
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagtaa 83  Q
    |||||||| |||||||||||||| |||||||||||| | |||||||||||||||||||||||||||    
T  20662123 caaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacggagggagtaa 20662058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 643495 - 643431
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    ||||||||||||||||||| |||||||||||||||||  ||||||||| ||||||||||||||||    
T  643495 caaagtatgtcaagtcaattatgtatattgtcaactgagtcatttatttagggacggagggagta 643431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 16696080 - 16696016
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    ||||||||||||||||||| |||||||||||||||| | |||| |||| ||||||||||||||||    
T  16696080 caaagtatgtcaagtcaatgatgtatattgtcaactaggtcatctattgagggacggagggagta 16696016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 24150938 - 24151002
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| |||||||||||||| ||||||||||||  || ||||||||||||||||||||||||    
T  24150938 caaagtatatcaagtcaataatgcatattgtcaactaaattatttattaagggacggagggagta 24151002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 25163361 - 25163425
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| | |||||||||||||||||||||||||   ||||||||| ||||||||||||||||    
T  25163361 caaagtatattaagtcaataatgtatattgtcaactatgtcatttattgagggacggagggagta 25163425  T

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Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 135
Target Start/End: Original strand, 28989834 - 28989887
Alignment:
Q  82 aatgcattcattggagttttcaattgaattatttgcagcgagtccaatcattgg 135  Q
    |||||||||||||||||||| ||||||||||||| || | ||||||||||||||    
T  28989834 aatgcattcattggagttttgaattgaattatttacaacaagtccaatcattgg 28989887  T

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Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 29979064 - 29979024
Alignment:
Q  42 atattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||||||| | ||||||||||||||||||||||||||    
T  29979064 atattgtcaactaggtcatttattaagggacggagggagta 29979024  T

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Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 33121739 - 33121803
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||  ||||||||||||| |||||||||||   ||||||||||| |||||| |||||||||    
T  33121739 caaagtacatcaagtcaataatatatattgtcaaacagatcatttatttagggacagagggagta 33121803  T

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Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 82
Target Start/End: Original strand, 24825391 - 24825426
Alignment:
Q  47 gtcaactggatcatttattaagggacggagggagta 82  Q
    ||||||||||||| ||||||||||||||||||||||    
T  24825391 gtcaactggatcacttattaagggacggagggagta 24825426  T

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Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 84
Target Start/End: Complemental strand, 31854853 - 31854816
Alignment:
Q  47 gtcaactggatcatttattaagggacggagggagtaat 84  Q
    ||||||||| ||||||||| ||||||||||||||||||    
T  31854853 gtcaactgggtcatttatttagggacggagggagtaat 31854816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 13207017 - 13206953
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    ||||| |||| |||||||||| |||||||||||| | | |||| |||| || |||||||||||||    
T  13207017 caaagaatgttaagtcaataaagtatattgtcaaataggtcatctattgagtgacggagggagta 13206953  T

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Target: chr8 (Bit Score: 65; Significance: 2e-28; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 30380727 - 30380791
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30380727 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 30380791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 3293165 - 3293100
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagtaa 83  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  3293165 caaagtatgtcaagtcaataatgtatattgtcaactgggtcatttattaagggacggagggagtaa 3293100  T

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Target: chr8; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 38845804 - 38845866
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggag 80  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  38845804 caaagtatgtcaagtcaacaatgtatattgtcaactgggtcatttattaagggacggagggag 38845866  T

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Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 8350944 - 8350880
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||    
T  8350944 caaagtatgtcaagtcaataatgtatattgtcaactaggtcatttattaagggatggagggagta 8350880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 37710096 - 37710160
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||    
T  37710096 caaagtatgtcaagtcaataatgtatattgtcaactgagtcatttattaagggacggatggagta 37710160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 2986522 - 2986588
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagtaat 84  Q
    |||| |||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||    
T  2986522 caaaatatgtcaagtcaataatgtatattgtcaactaagtcatttattaagggacggagggagtaat 2986588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 23249049 - 23249115
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagtaat 84  Q
    |||||||| |||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||    
T  23249049 caaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacggagggagtaat 23249115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 14522576 - 14522641
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagtaa 83  Q
    |||||||| ||||||||||||||||||||||||||| | |||| ||||||||||||||||||||||    
T  14522576 caaagtatatcaagtcaataatgtatattgtcaactaggtcatctattaagggacggagggagtaa 14522641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 40013848 - 40013909
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggaggga 79  Q
    |||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||    
T  40013848 caaagtatgtcaagtcaataatgtatattgtcaactgagtcatttactaagggacggaggga 40013909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 6471042 - 6471106
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||||||||||||||||||||||||||||||| | |||| ||||||||||| |||||||||    
T  6471042 caaagtatgtcaagtcaataatgtatattgtcaactaggtcatctattaagggacagagggagta 6471106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 30290121 - 30290185
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| |||||||||||||| |||||||||||| | ||||||||||||||||||||||||||    
T  30290121 caaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacggagggagta 30290185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 43066323 - 43066387
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| ||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||    
T  43066323 caaagtatatcaagtcaataatgtatattgtcgactaggtcatttattaagggacggagggagta 43066387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 2805540 - 2805476
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| |||||||||| ||| |||||||||||| | ||||||||||||||||||||||||||    
T  2805540 caaagtatatcaagtcaatgatgcatattgtcaactaggtcatttattaagggacggagggagta 2805476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 18809473 - 18809537
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| | ||||||||||||||||||||||||| | ||||||||| ||||||||||||||||    
T  18809473 caaagtatattaagtcaataatgtatattgtcaactaggtcatttattgagggacggagggagta 18809537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 29791139 - 29791203
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| |||||||||||||| |||||||||||| | ||||||||||||||||| ||||||||    
T  29791139 caaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacgtagggagta 29791203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 38739854 - 38739918
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    ||||||||||||| |||||||| ||||||||||||||| ||||||||||  ||||||||||||||    
T  38739854 caaagtatgtcaaatcaataatatatattgtcaactgggtcatttattaccggacggagggagta 38739918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 82
Target Start/End: Original strand, 45082011 - 45082073
Alignment:
Q  20 aagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||| |||| ||||||||| |||||||||||| | ||||||||||||||||||||||||||    
T  45082011 aagtatatcaaatcaataatgcatattgtcaactaggtcatttattaagggacggagggagta 45082073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 13138196 - 13138131
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagtaa 83  Q
    |||| |||||||||||||||||||||||| |||||| | |||| |||||| |||||||||||||||    
T  13138196 caaaatatgtcaagtcaataatgtatattatcaactaggtcatctattaaaggacggagggagtaa 13138131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 31127869 - 31127805
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| | ||||||||||| ||||||||||||| | ||||||||| ||||||||||||||||    
T  31127869 caaagtatattaagtcaataatatatattgtcaactaggtcatttattgagggacggagggagta 31127805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 10658174 - 10658234
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggaggg 78  Q
    |||||||||| ||||||||||||||||||||||| | |||||| |||| | ||||||||||    
T  10658174 caaagtatgttaagtcaataatgtatattgtcaaatagatcatctattgaaggacggaggg 10658234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 12893725 - 12893789
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||||| |||||||||||| |||||||||| | | ||||||| | ||||||||||||||||    
T  12893725 caaagtatgttaagtcaataatgcatattgtcaaataggtcatttactgagggacggagggagta 12893789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 39361322 - 39361378
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacgg 74  Q
    |||||||| |||| ||||||||| |||||||||||| | ||||||||||||||||||    
T  39361322 caaagtatatcaaatcaataatgcatattgtcaactaggtcatttattaagggacgg 39361378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 53
Target Start/End: Original strand, 45253943 - 45253978
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaact 53  Q
    ||||||||||||||||||||||||||||||||||||    
T  45253943 caaagtatgtcaagtcaataatgtatattgtcaact 45253978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 1580829 - 1580768
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    ||||||||||||| |||||||||||||||||   || | ||||||||||||| ||||||||||||    
T  1580829 caaagtatgtcaactcaataatgtatattgt---ctaggtcatttattaaggaacggagggagta 1580768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 6470678 - 6470624
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggac 72  Q
    |||| ||| |||| |||||||||||||||||||||| | |||| |||||||||||    
T  6470678 caaaatatctcaaatcaataatgtatattgtcaactaggtcatctattaagggac 6470624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 82
Target Start/End: Original strand, 3383616 - 3383669
Alignment:
Q  29 aagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    ||||||||||| ||||||||||| |  ||||| |||||||||||||| ||||||    
T  3383616 aagtcaataatatatattgtcaaatatatcatctattaagggacggaaggagta 3383669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 83
Target Start/End: Original strand, 38842389 - 38842425
Alignment:
Q  47 gtcaactggatcatttattaagggacggagggagtaa 83  Q
    |||||||| |||| |||||||||||||||||||||||    
T  38842389 gtcaactgtatcacttattaagggacggagggagtaa 38842425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 3e-27; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 1377228 - 1377294
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagtaat 84  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  1377228 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacagagggagtaat 1377294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 5744147 - 5744082
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagtaa 83  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  5744147 caaagtatgtcaagtcaaaaatgtatattgtcaactgggtcatttattaagggacggagggagtaa 5744082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 7738883 - 7738819
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  7738883 caaagtatgtcaagtcaataatgtatattgtcaactaggtcatttattaagggacggagggagta 7738819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 46212414 - 46212348
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagtaat 84  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||    
T  46212414 caaagtatgtcaagtcaataatgtatattgtcaactgagtcatttattaagggatggagggagtaat 46212348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 4264331 - 4264395
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    ||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||    
T  4264331 caaagtatgtcaagtcaataatgtatattgtcaactaagtcatttattaagggacggagggagta 4264395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 6494787 - 6494851
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  6494787 caaagtatgttaagtcaataatgtatattgtcaactgggtcatttattaagggacggaaggagta 6494851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 18360037 - 18359973
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||    
T  18360037 caaagtatgtcaagtcaataatgtatattgtcaactaggtcatctattaagggacggagggagta 18359973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 19652320 - 19652256
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||    
T  19652320 caaagtatgtcaagtcaataatgtatattgtcaactagatcatctattaagggacggaggaagta 19652256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 36602891 - 36602955
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||    
T  36602891 caaagtatgtcaagtcaataatgtatattgtcaactaggtcatctattaagggacggagggagta 36602955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 3443451 - 3443385
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagtaat 84  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||| |||| |||||||    
T  3443451 caaagtatgtcaagtcaataatgtatattgtcaactaggtcatttattaagggagggagagagtaat 3443385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 28152188 - 28152254
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagtaat 84  Q
    |||||||| |||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||    
T  28152188 caaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacggagggagtaat 28152254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 3442408 - 3442344
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| |||||||||||||| |||||||||||| | ||||||||||||||||||||||||||    
T  3442408 caaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacggagggagta 3442344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 3901203 - 3901139
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||    
T  3901203 caaagtatatcaagtcaataatgcatattgtcaactagatcatttattaagggacggaggaagta 3901139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 4209556 - 4209620
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    ||||||||||||| |||||||||||||||||||||| | |||| |||||||||||||||||||||    
T  4209556 caaagtatgtcaaatcaataatgtatattgtcaactaggtcatctattaagggacggagggagta 4209620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 5735468 - 5735532
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| |||||||||||||| |||||||||||| | ||||||||||||||||||||||||||    
T  5735468 caaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacggagggagta 5735532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 39260196 - 39260132
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||| ||||    
T  39260196 caaagtatgtcaagtcaataatgtatattgtcaactaggtcatctattaagggacggaggaagta 39260132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 45198404 - 45198340
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| | ||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  45198404 caaagtatattaagtcaataatgtatattgtcaactaggtcatttattaagggacggagggagta 45198340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 47579483 - 47579547
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| |||||||||||||| |||||||||||| | ||||||||||||||||||||||||||    
T  47579483 caaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacggagggagta 47579547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 55190630 - 55190566
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||||||||||||||||||||||||||||||| | | || |||||||||||||||||||||    
T  55190630 caaagtatgtcaagtcaataatgtatattgtcaactaggttatctattaagggacggagggagta 55190566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 5123221 - 5123162
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagg 77  Q
    |||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||    
T  5123221 caaagtatgtcaagtcaataatgtatattgtcaactaggtcatctattaagggacggagg 5123162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 20678652 - 20678586
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagtaat 84  Q
    |||||||| |||||||||||||| |||||||||||| | ||||||||||||||||||||| ||||||    
T  20678652 caaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacggaggaagtaat 20678586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 21858983 - 21858917
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagtaat 84  Q
    |||||||| |||||||||||||  |||||||||||| ||||||||||||||||||||| ||||||||    
T  21858983 caaagtatatcaagtcaataattcatattgtcaactagatcatttattaagggacggatggagtaat 21858917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 21914846 - 21914780
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagtaat 84  Q
    |||||||| |||||||||||||  |||||||||||| ||||||||||||||||||||| ||||||||    
T  21914846 caaagtatatcaagtcaataattcatattgtcaactagatcatttattaagggacggatggagtaat 21914780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 23603711 - 23603647
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||||||||||||||||||||||||||||||| | |||| |||| ||| ||||||||||||    
T  23603711 caaagtatgtcaagtcaataatgtatattgtcaactaggtcatctattgaggaacggagggagta 23603647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 26205768 - 26205704
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| |||||||||||||| ||||||||||||   ||||||||||||||||||||||||||    
T  26205768 caaagtatatcaagtcaataatgcatattgtcaactaagtcatttattaagggacggagggagta 26205704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 46803829 - 46803893
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| |||||||||||||| |||||||||||| | |||||||||||||||| |||||||||    
T  46803829 caaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacagagggagta 46803893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 18 - 79
Target Start/End: Complemental strand, 19525778 - 19525717
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggaggga 79  Q
    |||||||||| |||||||| |||||||||||||||| | ||||||||| |||||||||||||    
T  19525778 caaagtatgttaagtcaatgatgtatattgtcaactaggtcatttattgagggacggaggga 19525717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 49768642 - 49768699
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacgga 75  Q
    |||||||| |||||||||||||| |||||||||||| | |||||||||||||||||||    
T  49768642 caaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacgga 49768699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 25644556 - 25644620
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| | ||||||||||||||||||||||||| | ||||||||| | ||||||||||||||    
T  25644556 caaagtatattaagtcaataatgtatattgtcaactaggtcatttattgaaggacggagggagta 25644620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 28166471 - 28166535
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| |||||||||||||| |||||||||||| | ||||||||||||||||| ||| ||||    
T  28166471 caaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacgaaggaagta 28166535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 37688097 - 37688033
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| |||| ||||||||  |||||||||||| ||||||||||||||| ||||||||||||    
T  37688097 caaagtatatcaaatcaataatacatattgtcaactagatcatttattaaggaacggagggagta 37688033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 19170603 - 19170538
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagtaa 83  Q
    ||||||| |||||||||||||| |||||||||||   | ||||||||| |||||||||||||||||    
T  19170603 caaagtacgtcaagtcaataatatatattgtcaaacaggtcatttatttagggacggagggagtaa 19170538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 6923004 - 6922940
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| | |||||||||||||||||| |||||| | ||||||||| ||| ||||||||||||    
T  6923004 caaagtatattaagtcaataatgtatattatcaactaggtcatttattgaggaacggagggagta 6922940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 39786421 - 39786357
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    ||||||||||||| |||||||| |||||||||||||   |||| |||||||||||| ||||||||    
T  39786421 caaagtatgtcaaatcaataatatatattgtcaactaagtcatctattaagggacgaagggagta 39786357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 40250774 - 40250838
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||| |||||||||||||||||||||||||||||||   |||| ||||| |||||||| ||||||    
T  40250774 caaactatgtcaagtcaataatgtatattgtcaactatgtcatctattatgggacggaaggagta 40250838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 42187059 - 42187007
Alignment:
Q  23 tatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacgga 75  Q
    ||||||||||||||||||||||||||||||| | |||| |||||| |||||||    
T  42187059 tatgtcaagtcaataatgtatattgtcaactaggtcatctattaaaggacgga 42187007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 77
Target Start/End: Complemental strand, 19633913 - 19633854
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagg 77  Q
    ||||||| |||||||||||||| ||||||||||||| | |||| |||| |||||||||||    
T  19633913 caaagtaggtcaagtcaataatatatattgtcaactaggtcatctattgagggacggagg 19633854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 60
Target Start/End: Original strand, 23256134 - 23256174
Alignment:
Q  20 aagtatgtcaagtcaataatgtatattgtcaactggatcat 60  Q
    ||||||||||| |||||||||||||||||||||| ||||||    
T  23256134 aagtatgtcaaatcaataatgtatattgtcaactagatcat 23256174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 19 - 51
Target Start/End: Complemental strand, 9965469 - 9965437
Alignment:
Q  19 aaagtatgtcaagtcaataatgtatattgtcaa 51  Q
    ||||||||||| |||||||||||||||||||||    
T  9965469 aaagtatgtcaggtcaataatgtatattgtcaa 9965437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 83
Target Start/End: Complemental strand, 28898908 - 28898872
Alignment:
Q  47 gtcaactggatcatttattaagggacggagggagtaa 83  Q
    |||||||| ||||| ||||||||||||||||||||||    
T  28898908 gtcaactgtatcatatattaagggacggagggagtaa 28898872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 3e-27; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 42038720 - 42038786
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagtaat 84  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  42038720 caaagtatgtcaagtcaataatgtatattgtcaactgaatcatttattaagggacggagggagtaat 42038786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 7442955 - 7442891
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  7442955 caaagtatgtcaagtcaataatgtatattgtcaactagatcatttattaagggacggagggagta 7442891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 27559772 - 27559837
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagtaa 83  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  27559772 caaagtatgtcaagtcaaaaatgtatattgtcaactgggtcatttattaagggacggagggagtaa 27559837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 34827109 - 34827173
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  34827109 caaagtatgtcaagtcaataatatatattgtcaactgggtcatttattaagggacggagggagta 34827173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 83
Target Start/End: Original strand, 44330582 - 44330646
Alignment:
Q  19 aaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagtaa 83  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  44330582 aaagtatgtcaagtcaataatgtatattgtcaactgggtcatttaataagggacggagggagtaa 44330646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 32775967 - 32775902
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagtaa 83  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||||||    
T  32775967 caaagtatgtcaagtcaataatgtatattgtcaactgggtcatctattgagggacggagggagtaa 32775902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 4045297 - 4045233
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||| ||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||    
T  4045297 caaaatatgtcaagtcaacaatgtatattgtcaaatgggtcatttattaagggacggagggagta 4045233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 9877147 - 9877083
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||||||||||||||||||||||||||||| | | |||| |||||||||||||||||||||    
T  9877147 caaagtatgtcaagtcaataatgtatattgtcaattaggtcatctattaagggacggagggagta 9877083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 18718436 - 18718500
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| |||||||||||||| |||||||||||| | ||||||||||||||||||||||||||    
T  18718436 caaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacggagggagta 18718500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 41172821 - 41172757
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| |||||||||||||| |||||||||||| |||||||||||||||||||| |||||||    
T  41172821 caaagtatatcaagtcaataatgcatattgtcaactagatcatttattaagggacggggggagta 41172757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 18 - 80
Target Start/End: Complemental strand, 44283343 - 44283281
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggag 80  Q
    |||||||| |||||||||||||| |||||||||||| | ||||||||||||||||||||||||    
T  44283343 caaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacggagggag 44283281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 14372274 - 14372338
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| |||||||||||||| |||||||||| | | ||||||||||||||||||||||||||    
T  14372274 caaagtatatcaagtcaataatgcatattgtcaattaggtcatttattaagggacggagggagta 14372338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 14707599 - 14707535
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||  |||||||||||||| |||||||||||| | ||||||||||||||||||||||||||    
T  14707599 caaagtacatcaagtcaataatgcatattgtcaactaggtcatttattaagggacggagggagta 14707535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 23671573 - 23671637
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    ||||||||  ||||||||||||| |||||||||||| | ||||||||||||||||||||||||||    
T  23671573 caaagtataccaagtcaataatgcatattgtcaactaggtcatttattaagggacggagggagta 23671637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 40425313 - 40425249
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| |||| ||||||||| |||||||||||| | ||||||||||||||||||||||||||    
T  40425313 caaagtatatcaaatcaataatgcatattgtcaactaggtcatttattaagggacggagggagta 40425249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 41463580 - 41463517
Alignment:
Q  19 aaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||| || |||||| ||||||    
T  41463580 aaagtatgtcaaatcaataatgtatattgtcaactagatcatttattgagagacggaaggagta 41463517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 20517615 - 20517680
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagtaa 83  Q
    |||||||| |||||||||||||| ||||||||||||   ||||||||||||| |||||||||||||    
T  20517615 caaagtatatcaagtcaataatgcatattgtcaactaagtcatttattaaggaacggagggagtaa 20517680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 30708925 - 30708982
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacgga 75  Q
    |||| ||| ||||||||||||||||||||||||||| | |||||||||||||||||||    
T  30708925 caaaatatatcaagtcaataatgtatattgtcaactaggtcatttattaagggacgga 30708982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 3987296 - 3987232
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| |||||| ||||||| ||||||||||||   ||||||||||||||||||||||||||    
T  3987296 caaagtatatcaagttaataatgcatattgtcaactaagtcatttattaagggacggagggagta 3987232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 39418084 - 39418020
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    ||||||||||||||||||||||||||||||||||||   ||||  |||||| |||||||||||||    
T  39418084 caaagtatgtcaagtcaataatgtatattgtcaactaagtcatccattaagagacggagggagta 39418020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 13399168 - 13399105
Alignment:
Q  19 aaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||| |||| ||||||||||||||||||||||||| |||||| |||| |||||||| |||||||    
T  13399168 aaagaatgttaagtcaataatgtatattgtcaactagatcatctattgagggacggggggagta 13399105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 4083404 - 4083470
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagtaat 84  Q
    |||||||||||||||||||||||||||||||||| | |||||| |  |||| |||||| ||||||||    
T  4083404 caaagtatgtcaagtcaataatgtatattgtcaaatagatcatcttctaagagacggatggagtaat 4083470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 36199015 - 36198957
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggag 76  Q
    |||||||| |||| ||||||||| |||||||||||| | ||||||||||||||||||||    
T  36199015 caaagtatatcaaatcaataatgcatattgtcaactaggtcatttattaagggacggag 36198957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 332471 - 332535
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||||| ||||||||||||||||||||||| | ||| || ||||||||| | |||||||||    
T  332471 caaagtatgttaagtcaataatgtatattgtcaaatagattatctattaaggggcagagggagta 332535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 24283024 - 24282960
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||| |||||||| |||||||| ||||||||||||| |||||| |||| ||||||||| ||||||    
T  24283024 caaaatatgtcaaatcaataatatatattgtcaactagatcatctattgagggacggaaggagta 24282960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 38963716 - 38963780
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    ||||||| |||||||||||||| |||||||||||   |||||| |||| ||||||||||||||||    
T  38963716 caaagtacgtcaagtcaataatatatattgtcaagcagatcatctatttagggacggagggagta 38963780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 42020266 - 42020202
Alignment:
Q  19 aaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagtaa 83  Q
    ||||||||| || |||||||||||||||||||| | | | || |||| |||||||||||||||||    
T  42020266 aaagtatgttaaatcaataatgtatattgtcaaataggttatctattgagggacggagggagtaa 42020202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 43925138 - 43925074
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||||| |||||||||||||||||| |||| | | || | |||| ||||||||||||||||    
T  43925138 caaagtatgttaagtcaataatgtatattatcaaataggtcgtctattgagggacggagggagta 43925074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 4046046 - 4046104
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggag 76  Q
    ||||||||||||| | | |||| ||||||||||||| | |||| |||||||||||||||    
T  4046046 caaagtatgtcaaatgagtaatatatattgtcaactaggtcatctattaagggacggag 4046104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 84
Target Start/End: Original strand, 20682868 - 20682905
Alignment:
Q  47 gtcaactggatcatttattaagggacggagggagtaat 84  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  20682868 gtcaactgtgtcatttattaagggacggagggagtaat 20682905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 84
Target Start/End: Original strand, 11277761 - 11277797
Alignment:
Q  48 tcaactggatcatttattaagggacggagggagtaat 84  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  11277761 tcaactgtatcacttattaagggacggagggagtaat 11277797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 84
Target Start/End: Complemental strand, 20917763 - 20917727
Alignment:
Q  48 tcaactggatcatttattaagggacggagggagtaat 84  Q
    |||||| | ||||||||||||||||||||||||||||    
T  20917763 tcaactaggtcatttattaagggacggagggagtaat 20917727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 83
Target Start/End: Original strand, 40471962 - 40471998
Alignment:
Q  47 gtcaactggatcatttattaagggacggagggagtaa 83  Q
    ||||||||  |||||||||||||||||||||||||||    
T  40471962 gtcaactgtgtcatttattaagggacggagggagtaa 40471998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 83
Target Start/End: Original strand, 41575788 - 41575824
Alignment:
Q  47 gtcaactggatcatttattaagggacggagggagtaa 83  Q
    |||||||| ||||| ||||||||||||||||||||||    
T  41575788 gtcaactgtatcatatattaagggacggagggagtaa 41575824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 4e-26; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 4612151 - 4612087
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  4612151 caaagtatgtcaagtcaataatgtatattgtcaactgggtcatttattaagggacggagggagta 4612087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 31466422 - 31466356
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagtaat 84  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  31466422 caaagtatgtcaagtcaataatgtatattgtcaactaggtcatttattaagggacggagggagtaat 31466356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 19072966 - 19073030
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  19072966 caaagtatgtcaaatcaataatgtatattgtcaactgggtcatttattaagggacggagggagta 19073030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 47713566 - 47713502
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  47713566 caaagtatgtcaagtcaataatgtatattgtcaactgggtcatttattaagggacagagggagta 47713502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 31110822 - 31110886
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  31110822 caaagtatttcaagtcaattatgtatattgtcaactggatcatttatttagggacggagggagta 31110886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 36905723 - 36905787
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||    
T  36905723 caaagtatgtcaagtcaattatgtatattgtcaactgggtcatttatttagggacggagggagta 36905787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 48531519 - 48531583
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||    
T  48531519 caaagtatgtcaagtcaataatgtatattgtcaactaggtcatctattaagggacggagggagta 48531583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 36819893 - 36819959
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagtaat 84  Q
    |||||||| |||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||    
T  36819893 caaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacggagggagtaat 36819959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 23474033 - 23473969
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||| ||||||    
T  23474033 caaagtatgtaaagtcaataatgtatattgtcaactaggtcatttattaagggacggatggagta 23473969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 47081177 - 47081241
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| |||||||||||||| |||||||||||| | ||||||||||||||||||||||||||    
T  47081177 caaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacggagggagta 47081241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 34478072 - 34478006
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagtaat 84  Q
    |||||||||| || |||||||||||||||||||||| | ||||||||| ||||||||||||||||||    
T  34478072 caaagtatgttaaatcaataatgtatattgtcaactaggtcatttattgagggacggagggagtaat 34478006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 10464179 - 10464115
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| | ||||||||||||||||||||||||| | ||||||||| ||||||||||||||||    
T  10464179 caaagtatattaagtcaataatgtatattgtcaactaggtcatttattgagggacggagggagta 10464115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 37951009 - 37950945
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||| ||| |||||||||||||| |||||||||||| | ||||||||||||||||||||||||||    
T  37951009 caaaatatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacggagggagta 37950945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 28185475 - 28185410
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagtaa 83  Q
    |||||||| |||||||||||||| ||||||||||||   |||||||||||||||||||| ||||||    
T  28185475 caaagtatatcaagtcaataatgcatattgtcaactatgtcatttattaagggacggagagagtaa 28185410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 2400482 - 2400546
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| | |||||||||||| ||||||||||||  |||||||||||||||||||||| ||||    
T  2400482 caaagtatataaagtcaataatgcatattgtcaactatatcatttattaagggacggaggaagta 2400546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 35500811 - 35500747
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| | ||||||||||||||||||||||||| | ||| ||||| ||||||||||||||||    
T  35500811 caaagtatcttaagtcaataatgtatattgtcaactaggtcaattattgagggacggagggagta 35500747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 36859272 - 36859208
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| |||| ||||||||| ||||||||||||   ||||||||||||||||||||||||||    
T  36859272 caaagtatatcaaatcaataatgcatattgtcaactaagtcatttattaagggacggagggagta 36859208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 37231627 - 37231563
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| | ||||||||||||||||||||||||| | || |||||| ||||||||||||||||    
T  37231627 caaagtatattaagtcaataatgtatattgtcaactaggtcgtttattgagggacggagggagta 37231563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 42086702 - 42086638
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||| ||| |||||||||||||  ||||||||||||  |||||||||||||||||||||||||||    
T  42086702 caaaatatatcaagtcaataatacatattgtcaactaaatcatttattaagggacggagggagta 42086638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 42834356 - 42834292
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| |||| ||||||||| |||||||| ||| | ||||||||||||||||||||||||||    
T  42834356 caaagtatatcaaatcaataatgcatattgtcgactaggtcatttattaagggacggagggagta 42834292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 82
Target Start/End: Original strand, 47538124 - 47538184
Alignment:
Q  22 gtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||||||| ||||||||||||||||||| | |||| ||||||||| |||||||||||    
T  47538124 gtatgtcaagtccataatgtatattgtcaactaggtcatctattaaggggcggagggagta 47538184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 21392215 - 21392276
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggaggga 79  Q
    ||||||||||||||| |||||||||||||||||||| | | |||||||||| |||| |||||    
T  21392215 caaagtatgtcaagttaataatgtatattgtcaactaggttatttattaagagacgaaggga 21392276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 32619006 - 32618941
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagtaa 83  Q
    |||||||| | |||||||||||| |||||||||| | | ||||||||||||||||||| |||||||    
T  32619006 caaagtatataaagtcaataatgcatattgtcaattaggtcatttattaagggacggaaggagtaa 32618941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 44479785 - 44479748
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactgg 55  Q
    ||||||||||||||||||||||||||||||||||||||    
T  44479785 caaagtatgtcaagtcaataatgtatattgtcaactgg 44479748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 82
Target Start/End: Complemental strand, 24151640 - 24151581
Alignment:
Q  23 tatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    ||||| ||||||||||||||||||||||| | | |||  |||||||||||||||||||||    
T  24151640 tatgttaagtcaataatgtatattgtcaaataggtcacctattaagggacggagggagta 24151581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 4e-26; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 32002078 - 32002014
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  32002078 caaagtatgtcaagtcaataatgtatattgtcaactgggtcatttattaagggacggagggagta 32002014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 39894978 - 39895042
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  39894978 caaagtatgtcaagtcaataatgtatattgtcaactgggtcatttattaagggacggagggagta 39895042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 32334702 - 32334638
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  32334702 caaagtatgtcaaatcaataatgtatattgtcaactgggtcatttattaagggacggagggagta 32334638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 5364621 - 5364687
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagtaat 84  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  5364621 caaaatatgtcaagtcaataatgtatattgtcaactgggtcatttattaagggacggagagagtaat 5364687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 5212986 - 5212922
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||    
T  5212986 caaagtatgtcaagtcaataatgtatattgtcaactaggtcatttattaagagacggagggagta 5212922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 29627465 - 29627529
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||    
T  29627465 caaagtatgtcaagtcaattatgtatattgtcaactgggtcatttatttagggacggagggagta 29627529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 40512744 - 40512679
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagtaa 83  Q
    ||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||| ||||||    
T  40512744 caaagtatgtcaaatcaataatgtatattgtcaactgagtcatttattaagggacggagagagtaa 40512679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 35448061 - 35447997
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| |||||||||||||| |||||||||||| | ||||||||||||||||||||||||||    
T  35448061 caaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacggagggagta 35447997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 42148504 - 42148568
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| |||||||||||||| |||||||||||| | ||||||||||||||||||||||||||    
T  42148504 caaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacggagggagta 42148568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 35290483 - 35290549
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagtaat 84  Q
    ||||||||| |||||||||||||||||||||||||| | |||| |||||||||||||||| ||||||    
T  35290483 caaagtatgacaagtcaataatgtatattgtcaactaggtcatctattaagggacggaggaagtaat 35290549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 38698160 - 38698226
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagtaat 84  Q
    |||||||| |||||||||||||| ||||||||||||   ||||||||||||||||||||||||||||    
T  38698160 caaagtatatcaagtcaataatgcatattgtcaactaagtcatttattaagggacggagggagtaat 38698226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 39036607 - 39036673
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagtaat 84  Q
    ||||||||| |||||||||||||||||||||||||| | |||| |||||||||||||||||| ||||    
T  39036607 caaagtatgacaagtcaataatgtatattgtcaactaggtcatctattaagggacggagggaataat 39036673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 37843639 - 37843574
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagtaa 83  Q
    |||||||||||||||||||||||||||||||||| | | |||| |||| |||||||||||||||||    
T  37843639 caaagtatgtcaagtcaataatgtatattgtcaagtaggtcatctattgagggacggagggagtaa 37843574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 4299897 - 4299833
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| | ||||||||||||||||||||||||| | ||||||||| ||||||||||||||||    
T  4299897 caaagtatattaagtcaataatgtatattgtcaactaggtcatttattgagggacggagggagta 4299833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 14475294 - 14475230
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||||||||||||||||||||||||||||||| | |||| |||| | ||||||||||||||    
T  14475294 caaagtatgtcaagtcaataatgtatattgtcaactaggtcatctattgaaggacggagggagta 14475230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 22613773 - 22613709
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| | ||||||||||||||||||||||||| | ||||||||| ||||||||||||||||    
T  22613773 caaagtatattaagtcaataatgtatattgtcaactaggtcatttattgagggacggagggagta 22613709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 4924902 - 4924835
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagtaatg 85  Q
    |||||||||||||||||||||| ||||||||||| | | |||| |||||||||||||||| |||||||    
T  4924902 caaagtatgtcaagtcaataatatatattgtcaattaggtcatctattaagggacggaggaagtaatg 4924835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 43517124 - 43517059
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagtaa 83  Q
    |||||||||||||||||||||| |||||||||||||   |||| |||||||||||||||| |||||    
T  43517124 caaagtatgtcaagtcaataatatatattgtcaactaagtcatctattaagggacggaggaagtaa 43517059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 970335 - 970399
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| | |||| |||||||||||||||||||| | ||||||||| ||||||||||||||||    
T  970335 caaagtatattaagttaataatgtatattgtcaactaggtcatttattgagggacggagggagta 970399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 16048282 - 16048346
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| | ||||||||||||||||||||||||| | ||||||||| ||||||||| ||||||    
T  16048282 caaagtatattaagtcaataatgtatattgtcaactaggtcatttattgagggacggacggagta 16048346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 23988774 - 23988838
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| |||||||||||||| ||||||||||||   ||||||||||||||||||| ||||||    
T  23988774 caaagtatatcaagtcaataatgcatattgtcaactaagtcatttattaagggacggatggagta 23988838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 77
Target Start/End: Original strand, 37516342 - 37516401
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagg 77  Q
    |||||||| ||||||||||||||||||||||||||| | | || ||||||||||||||||    
T  37516342 caaagtatatcaagtcaataatgtatattgtcaactaggttatctattaagggacggagg 37516401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 39405961 - 39406025
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| | ||||||||||||||||||||||||| | ||||||||| ||||| ||| ||||||    
T  39405961 caaagtatattaagtcaataatgtatattgtcaactaggtcatttattgagggaaggatggagta 39406025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 43067418 - 43067482
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| | || |||||||||||||||||||||| | ||||||||| ||||||||| ||||||    
T  43067418 caaagtatattaaatcaataatgtatattgtcaactaggtcatttattgagggacggatggagta 43067482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 25563697 - 25563754
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacgga 75  Q
    |||||||||| || ||||||||||| |||||||||| | |||| ||||||| ||||||    
T  25563697 caaagtatgttaaatcaataatgtacattgtcaactaggtcatctattaagcgacgga 25563754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 84
Target Start/End: Complemental strand, 31191015 - 31190978
Alignment:
Q  47 gtcaactggatcatttattaagggacggagggagtaat 84  Q
    |||||||| |||| ||||||||||||||||||||||||    
T  31191015 gtcaactgtatcacttattaagggacggagggagtaat 31190978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 1830852 - 1830916
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    ||||||| || ||||||||||| ||||||||||| |   ||||||||| ||||||||| ||||||    
T  1830852 caaagtacgttaagtcaataatatatattgtcaaatacgtcatttatttagggacggatggagta 1830916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 41411221 - 41411157
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    ||||||| || ||||||||||| ||||||||||| |   ||||||||| ||||||||| ||||||    
T  41411221 caaagtacgttaagtcaataatatatattgtcaaatacgtcatttatttagggacggatggagta 41411157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 83
Target Start/End: Complemental strand, 42148342 - 42148306
Alignment:
Q  47 gtcaactggatcatttattaagggacggagggagtaa 83  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  42148342 gtcaactagatcatttatttagggacggagggagtaa 42148306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 4e-26; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 54840192 - 54840128
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  54840192 caaagtatgtcaagtcaataatgtatattgtcaactgggtcatttattaagggacggagggagta 54840128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 10571208 - 10571144
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  10571208 caaagtatgtcaagtcaataatgtatattgtcaactgggttatttattaagggacggagggagta 10571144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 21907193 - 21907257
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  21907193 caaagtatgtcaagtcaataatgtatattgtcaactgagtcatttattaagggacggagggagta 21907257  T

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Target: chr3; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 38833860 - 38833924
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  38833860 caaaatatgtcaagtcaataatgtatattgtcaactgggtcatttattaagggacggagggagta 38833924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 45167496 - 45167560
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  45167496 caaaatatgtcaagtcaataatgtatattgtcaactggatcatatattaagggacggagggagta 45167560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 48706910 - 48706846
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  48706910 caaaatatgtcaagtcaataatatatattgtcaactggatcatttattaagggacggagggagta 48706846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 51062587 - 51062653
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagtaat 84  Q
    ||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  51062587 caaagtatgtcaagtcaataatgtatattatcaactgagtcatttattaagggacggagggagtaat 51062653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 53066567 - 53066633
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagtaat 84  Q
    |||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||    
T  53066567 caaagtatgtcaagtcaataatatatattgtcaactagatcatctattaagggacggagggagtaat 53066633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 29728162 - 29728098
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  29728162 caaaatatctcaagtcaataatgtatattgtcaactagatcatttattaagggacggagggagta 29728098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 8559069 - 8559002
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagtaatg 85  Q
    |||||||| |||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||    
T  8559069 caaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacggagggagtaatg 8559002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 82
Target Start/End: Original strand, 34827451 - 34827514
Alignment:
Q  19 aaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    ||||||||||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||    
T  34827451 aaagtatgtcaagtcaataatatatattgtcaactaggtcatttattaagggacggagggagta 34827514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 7459884 - 7459820
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| |||||||||||||| |||||||||||| | ||||||||||||||||||||||||||    
T  7459884 caaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacggagggagta 7459820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 18659249 - 18659313
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| |||||||||||||| |||||||||||| | ||||||||||||||||||||||||||    
T  18659249 caaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacggagggagta 18659313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 32951200 - 32951136
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| | ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  32951200 caaagtatattaagtcaataatgtatattgtcaactagatcatttattgagggacggagggagta 32951136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 21 - 82
Target Start/End: Original strand, 46483748 - 46483809
Alignment:
Q  21 agtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||||| |||||||||||||||||||||| |||||| ||||||||||| |||||||||    
T  46483748 agtatgtcaaatcaataatgtatattgtcaactagatcatctattaagggacagagggagta 46483809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 37833097 - 37833161
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| |||||||||||||| ||||||| |||| | ||||||||||||||||||||||||||    
T  37833097 caaagtatatcaagtcaataatgcatattgttaactaggtcatttattaagggacggagggagta 37833161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 52668550 - 52668486
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| |||||||||||||| |||||||||||| | | ||||||||||||||||||||||||    
T  52668550 caaagtatatcaagtcaataatgcatattgtcaactaggtgatttattaagggacggagggagta 52668486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 1327509 - 1327566
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacgga 75  Q
    |||||||| |||||||||||||| |||||||||||| | |||||||||||||||||||    
T  1327509 caaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacgga 1327566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 47638252 - 47638313
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggaggga 79  Q
    ||||||||||||| |||||||||||||||||||| | | |||| ||||||||||||||||||    
T  47638252 caaagtatgtcaaatcaataatgtatattgtcaattaggtcatctattaagggacggaggga 47638313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 17053061 - 17053125
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| | || |||||||||||||||||||||||| ||||||||| |||||||||| |||||    
T  17053061 caaagtatattaaatcaataatgtatattgtcaactgggtcatttattgagggacggagagagta 17053125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 32285240 - 32285176
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||||||||||||||||||||||||||||||| |  ||| |||||||| ||||| ||||||    
T  32285240 caaagtatgtcaagtcaataatgtatattgtcaactaggccatctattaaggaacggatggagta 32285176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 82
Target Start/End: Original strand, 10435329 - 10435380
Alignment:
Q  31 gtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    ||||||||||||||||||||||| | ||||||||| ||||||||||||||||    
T  10435329 gtcaataatgtatattgtcaactaggtcatttattgagggacggagggagta 10435380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 73
Target Start/End: Original strand, 38492248 - 38492303
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacg 73  Q
    |||||||||| || |||||||||||||||||||||| | |||||||||||||||||    
T  38492248 caaagtatgttaaatcaataatgtatattgtcaactaggtcatttattaagggacg 38492303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 27849146 - 27849199
Alignment:
Q  31 gtcaataatgtatattgtcaactggatcatttattaagggacggagggagtaat 84  Q
    ||||||||||||||||||||||| | |||| |||||||||||||| ||||||||    
T  27849146 gtcaataatgtatattgtcaactaggtcatctattaagggacggaaggagtaat 27849199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 3547484 - 3547420
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||||| ||||||||||||||||||||||| | | |||| |||| ||||||| ||||||||    
T  3547484 caaagtatgttaagtcaataatgtatattgtcaaataggtcatctattgagggacgaagggagta 3547420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 4238558 - 4238494
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| | |||| ||||||||||||||||||||   ||||||||| ||||||||||||||||    
T  4238558 caaagtatattaagttaataatgtatattgtcaactaagtcatttattgagggacggagggagta 4238494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 36665215 - 36665275
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggaggg 78  Q
    |||||||||| |||| |||||||||||||||||| | | |||| |||||||||||||||||    
T  36665215 caaagtatgttaagttaataatgtatattgtcaaataggtcatctattaagggacggaggg 36665275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 54673975 - 54674039
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    ||||||| ||||| |||||||| |||||||||||   ||||||||||| ||||||||||||||||    
T  54673975 caaagtacgtcaaatcaataatatatattgtcaaacagatcatttatttagggacggagggagta 54674039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 49058053 - 49058119
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagtaat 84  Q
    ||||||| |||||||||||||| |||||||||||   | |||| |||| ||||||||||||||||||    
T  49058053 caaagtacgtcaagtcaataatatatattgtcaaagaggtcatctatttagggacggagggagtaat 49058119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 68
Target Start/End: Original strand, 43138048 - 43138098
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaag 68  Q
    |||||||| |||||||||||||| ||||||||||||   ||||||||||||    
T  43138048 caaagtatatcaagtcaataatgcatattgtcaactaagtcatttattaag 43138098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 84
Target Start/End: Complemental strand, 21907031 - 21906994
Alignment:
Q  47 gtcaactggatcatttattaagggacggagggagtaat 84  Q
    ||||||| ||||||||||| ||||||||||||||||||    
T  21907031 gtcaactagatcatttattgagggacggagggagtaat 21906994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 4e-26; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 32988413 - 32988349
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32988413 caaaatatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 32988349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 1849898 - 1849962
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  1849898 caaagtatgtcaagtcaataatgtatattgtcaactgggtcatttattaagggacggatggagta 1849962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 38458927 - 38458991
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  38458927 caaagtatgtcaagtcaataatgtatattgtcaactgggtcatttattaagggatggagggagta 38458991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 29162040 - 29162106
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagtaat 84  Q
    |||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  29162040 caaagtatctcaagtcaataatgtatattgtcaactagatcgtttattaagggacggagggagtaat 29162106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 49805316 - 49805251
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagtaa 83  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||    
T  49805316 caaagtatgtcaagtcaacaatgtatattgtcaactgggtcatttattaaggaacggagggagtaa 49805251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 25531975 - 25532039
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  25531975 caaagtatatcaagtcaataatgtatattgtcaactaggtcatttattaagggacggagggagta 25532039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 37281289 - 37281353
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||||    
T  37281289 caaagtatgtcaagtcaataatatatattgtcaactagatcatctattaagggacggagggagta 37281353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 50539457 - 50539521
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    ||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||    
T  50539457 caaagtatgtcaagtcaattatgtatattgtcaactgagtcatttattaagggacggagggagta 50539521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 30529114 - 30529048
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagtaat 84  Q
    |||| ||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  30529114 caaattatctcaagtcaataatgtatattgtcaactaggtcatttattaagggacggagggagtaat 30529048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 50876561 - 50876626
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagtaa 83  Q
    |||||||| |||||||||||||| |||||||||||| | |||||||||||||||||||||||||||    
T  50876561 caaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacggagggagtaa 50876626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 3898635 - 3898571
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| | ||||||||||||||||||||||||| | ||||||||| ||||||||||||||||    
T  3898635 caaagtatattaagtcaataatgtatattgtcaactaggtcatttattgagggacggagggagta 3898571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 4605196 - 4605260
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||||| ||||||||||||||||||||||| | | |||| |||||||||||||||||||||    
T  4605196 caaagtatgtaaagtcaataatgtatattgtcaaataggtcatctattaagggacggagggagta 4605260  T

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Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 16265230 - 16265294
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| | ||||||||||||||||||||||||| | ||||||||| ||||||||||||||||    
T  16265230 caaagtatattaagtcaataatgtatattgtcaactaggtcatttattgagggacggagggagta 16265294  T

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Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 16266359 - 16266423
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| | ||||||||||||||||||||||||| | ||||||||| ||||||||||||||||    
T  16266359 caaagtatattaagtcaataatgtatattgtcaactaggtcatttattgagggacggagggagta 16266423  T

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Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 26441831 - 26441895
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| | ||||||||||||||||||||||||| | ||||||||| ||||||||||||||||    
T  26441831 caaagtatattaagtcaataatgtatattgtcaactaggtcatttattgagggacggagggagta 26441895  T

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Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 42708697 - 42708761
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| |||||||||||||| |||||||||||| | ||||||||||||||||||| ||||||    
T  42708697 caaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacggatggagta 42708761  T

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Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 43680267 - 43680331
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| | ||||||||||||||||||||||||| | ||||||||| ||||||||||||||||    
T  43680267 caaagtatattaagtcaataatgtatattgtcaactaggtcatttattgagggacggagggagta 43680331  T

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Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 45234913 - 45234849
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    ||||||||||||| | |||||||||||||||||||| | |||||||||||| |||||||||||||    
T  45234913 caaagtatgtcaaattaataatgtatattgtcaactaggtcatttattaagagacggagggagta 45234849  T

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Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 48264875 - 48264811
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| |||| ||||||||| |||||||||||| | ||||||||||||||||||||||||||    
T  48264875 caaagtatatcaactcaataatgcatattgtcaactaggtcatttattaagggacggagggagta 48264811  T

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Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 52379186 - 52379250
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| |||||||||||||| |||||||||||| | ||||||||||| ||||||||||||||    
T  52379186 caaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaaaggacggagggagta 52379250  T

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Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 39354328 - 39354264
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||| ||| |||||||||||||| ||| |||||||| | ||||||||||||||||||||||||||    
T  39354328 caaaatatatcaagtcaataatgcatactgtcaactaggtcatttattaagggacggagggagta 39354264  T

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Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 80
Target Start/End: Complemental strand, 48219702 - 48219644
Alignment:
Q  22 gtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggag 80  Q
    |||| |||||||||||||| |||||||||||| | ||||||||||||||||||| ||||    
T  48219702 gtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacggaaggag 48219644  T

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Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 23569738 - 23569674
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    ||||||| |||||||||||||| |||||||||||   | ||||||||| ||||||||||||||||    
T  23569738 caaagtacgtcaagtcaataatatatattgtcaaacaggtcatttatttagggacggagggagta 23569674  T

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Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 24982548 - 24982612
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| | ||||||||||| ||||||||||||  | ||||||||| ||||||||||||||||    
T  24982548 caaagtatattaagtcaataatatatattgtcaacaaggtcatttattgagggacggagggagta 24982612  T

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Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 81
Target Start/End: Complemental strand, 21034593 - 21034530
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagt 81  Q
    |||||||||| ||||||||||||||||||||||| | ||| || |||| |||||| ||||||||    
T  21034593 caaagtatgttaagtcaataatgtatattgtcaaatagattatctattgagggacagagggagt 21034530  T

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Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 41501671 - 41501607
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    ||||||||||||| ||||||||||||||||| |||| | |||| ||| ||||||  |||||||||    
T  41501671 caaagtatgtcaattcaataatgtatattgtgaactaggtcatctatcaagggattgagggagta 41501607  T

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Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 47222412 - 47222470
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggag 76  Q
    |||||||||| |||||||||||||||||| |||| | | ||||||||| ||| ||||||    
T  47222412 caaagtatgttaagtcaataatgtatattatcaaataggtcatttattgaggaacggag 47222470  T

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Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 84
Target Start/End: Complemental strand, 41855564 - 41855527
Alignment:
Q  47 gtcaactggatcatttattaagggacggagggagtaat 84  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  41855564 gtcaactgtgtcatttattaagggacggagggagtaat 41855527  T

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Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 50481473 - 50481537
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||||| | ||||||||||||||||||||| | |  ||| |||| ||||||| ||||||||    
T  50481473 caaagtatgttaggtcaataatgtatattgtcaaataggccatctattgagggacgtagggagta 50481537  T

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Target: scaffold0007 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 15280 - 15216
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  15280 caaagtatgtcaagtcaataatgtatattgtcaactaggtcatttattaagggacggagggagta 15216  T

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Target: scaffold0459 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 12949 - 13005
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacgg 74  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  12949 caaagtatgtcaagtcaataatgtatattgtcaactgggtcatttattaagggacgg 13005  T

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Target: scaffold0366 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 10590 - 10646
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacgg 74  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  10590 caaagtatgtcaagtcaataatgtatattgtcaactgggtcatttattaagggacgg 10646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 14256 - 14312
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacgg 74  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  14256 caaagtatgtcaagtcaataatgtatattgtcaactgggtcatttattaagggacgg 14312  T

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Target: scaffold0051 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 41280 - 41217
Alignment:
Q  19 aaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||||||||||||||| ||||||||||||||   |||||||||||| |||||||||||||    
T  41280 aaagtatgtcaagtcaataacgtatattgtcaactaagtcatttattaagagacggagggagta 41217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 44172 - 44115
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacgga 75  Q
    |||||||| |||||||||||||| |||||||||||| | |||||||||||||||||||    
T  44172 caaagtatatcaagtcaataatgcatattgtcaactaggtcatttattaagggacgga 44115  T

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Target: scaffold0027 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 18 - 79
Target Start/End: Original strand, 117518 - 117579
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggaggga 79  Q
    |||||||| |||||||||||||  |||||||||||| | |||||||||||||||||||||||    
T  117518 caaagtatatcaagtcaataatacatattgtcaactaggtcatttattaagggacggaggga 117579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 47 - 83
Target Start/End: Complemental strand, 117356 - 117320
Alignment:
Q  47 gtcaactggatcatttattaagggacggagggagtaa 83  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  117356 gtcaactagatcatttatttagggacggagggagtaa 117320  T

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Target: scaffold0604 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 82
Target Start/End: Original strand, 1317 - 1369
Alignment:
Q  30 agtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||||||||||||||||||| | |||| |||| | ||||||||||||||    
T  1317 agtcaataatgtatattgtcaactaggtcatctattgacggacggagggagta 1369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 14535 - 14599
Alignment:
Q  18 caaagtatgtcaagtcaataatgtatattgtcaactggatcatttattaagggacggagggagta 82  Q
    |||||||| |||| |||||||||||||||||||||| | |||| ||||  |||||||| ||||||    
T  14535 caaagtatatcaaatcaataatgtatattgtcaactaggtcatctattgtgggacggatggagta 14599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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