View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10284_low_1 (Length: 833)
Name: NF10284_low_1
Description: NF10284
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10284_low_1 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 484; Significance: 0; HSPs: 26)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 484; E-Value: 0
Query Start/End: Original strand, 48 - 813
Target Start/End: Original strand, 22888993 - 22889761
Alignment:
| Q |
48 |
aggaagttcagagatttcaaggttttgagcttgaccattaaccttaaaactccaaccaaaaatataatgagaagctgcaagtaaccctgttgaagatgag |
147 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| | | ||||||||||||||||||| |
|
|
| T |
22888993 |
aggaagttcagagatttcaaggttttgagcttgaccattaaccttaaaactccaaccaagaatatactgagaagctaccattaaccctgttgaagatgag |
22889092 |
T |
|
| Q |
148 |
aatccaacatacattctattgttaagaattggagaaagatcattggtcaatgataacaaaggtcgtgttggtttaa---------caacatcaattggag |
238 |
Q |
| |
|
||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||| | |
|
|
| T |
22889093 |
aatccaacatacattctattgttgagaattgaagaaagatctttggtcaatgataacaaaggttgtgttggtttattactagcaccaacactcattggtg |
22889192 |
T |
|
| Q |
239 |
ctaaagtaacattaatctttttgttcactccatcatattcaatccataccttcatataagatccgccgaaaaggtataatcccctcagataaccatcata |
338 |
Q |
| |
|
|||||||||||| ||||||||| |||||||||||||||||||||||||||| |||| |||| | | ||||| |||| || | | | ||||| | |
|
|
| T |
22889193 |
ctaaagtaacatcaatctttttcttcactccatcatattcaatccatacctgcatagggtatccactggaaagggataaatccttgaattgaccataac- |
22889291 |
T |
|
| Q |
339 |
atcatcatcataatatcctgcaggagttgaattagctgattgcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactcaaaatct |
438 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||| | |
|
|
| T |
22889292 |
-----catcataatatcctgcaggagttgaatcagctgatttcaaatcattgatatcaattccaacatggttatcgttgatatcatcaaactcaaaattt |
22889386 |
T |
|
| Q |
439 |
tgaacagtgtcaaactcaacagcaaaaacatggttgctactgtttccattgttggaattgttaaagagaccaaggtattgacctggtagtgaatctggta |
538 |
Q |
| |
|
||| |||||||| ||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
22889387 |
tgacgagtgtcaagctcaacaccaaaaacatggttgctactgtttccactgttggaatcgttaaagagaccaaggtattgacttggtagtgaatctggta |
22889486 |
T |
|
| Q |
539 |
gcccttttgttggagaaataacaaaaacaattccatggccaccaagagttggatattgaggtattatggcaaatacaaaagtagttgagaaagaagacac |
638 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
22889487 |
gcccttttgttggagaaataacaaaaacaattccatggccaccaatatttgcatattgaggtattatggcaaataaaaaagtagttgagaaagaagacac |
22889586 |
T |
|
| Q |
639 |
actttcactagaagtgtttttgaaaactattggatttggatagaaagcatgtcctttggctctttctatttcattggtgagtcttagtaagccatttgag |
738 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| | |||||||||||| ||||||||||||||| |
|
|
| T |
22889587 |
gctttcactggaagtgtttttgaaaactattggatttggatagaaaccatgtcctttgtctctttctgtatcattggtgagttttagtaagccatttgta |
22889686 |
T |
|
| Q |
739 |
gttaactcagcaataccatcaagatataaatgtgatgattggaatccattatatatgaaactgttgtcttcactt |
813 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22889687 |
gttaactcagcaataccatcaagatataaatgtgatgattggaatccattatatatgaaactgttgtcttcactt |
22889761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 469; E-Value: 0
Query Start/End: Original strand, 27 - 813
Target Start/End: Original strand, 22814707 - 22815496
Alignment:
| Q |
27 |
ctcatcaaatattgttagctcaggaagttcagagatttcaaggttttgagcttgaccattaaccttaaaactccaaccaaaaatataatgagaagctgca |
126 |
Q |
| |
|
|||| |||||| |||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||| || |
|
|
| T |
22814707 |
ctcagcaaatactgttagcttaggaagttcagatatttcaaggttttgagcttggccattaaccttaaaactccacccaagaatataatgagaagctaca |
22814806 |
T |
|
| Q |
127 |
agtaaccctgttgaagatgagaatccaacatacattctattgttaagaattggagaaagatcattggtcaatgataacaaaggtcgtgttggtttaa--- |
223 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||| ||||||||||| |
|
|
| T |
22814807 |
agtaaccctgttgaagatgagaatccaacatacattctattgttgagaattgaagaaagatctttggtcaatgataacaaaggttgtgttggtttattac |
22814906 |
T |
|
| Q |
224 |
------caacatcaattggagctaaagtaacattaatctttttgttcactccatcatattcaatccataccttcatataagatccgccgaaaaggtataa |
317 |
Q |
| |
|
||||| ||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||| ||| | |||| | ||||| |||| |
|
|
| T |
22814907 |
tagcaccaacactcattggagctaaagtaacatcaatctttttcttcactccatcatagtcaatccatacctgtataggaaatccattggaaagggataa |
22815006 |
T |
|
| Q |
318 |
tcccctcagataaccatcataatcatcatcataatatcctgcaggagttgaattagctgattgcaaatcattgatatcaataccaacatggttatcattg |
417 |
Q |
| |
|
|||| | | ||||| || ||| |||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||| |
|
|
| T |
22815007 |
ctccctgaattgaccatgat------cattataatatcctgcaggagttgaattagctgatttcaaataattgatatcgataccaacatggttatcattg |
22815100 |
T |
|
| Q |
418 |
atatcatcaaactcaaaatcttgaacagtgtcaaactcaacagcaaaaacatggttgctactgtttccattgttggaattgttaaagagaccaaggtatt |
517 |
Q |
| |
|
||||||||||||| ||||||||| |||||||| ||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
22815101 |
atatcatcaaactgcaaatcttgacgagtgtcaagctcaacaccaaaaacatggttgttactgtttccattgttggaatcgttaaagagaccaaggtatt |
22815200 |
T |
|
| Q |
518 |
gacctggtagtgaatctggtagcccttttgttggagaaataacaaaaacaattccatggccaccaagagttggatattgaggtattatggcaaatacaaa |
617 |
Q |
| |
|
||| ||||||||||| ||||||||||||||| ||||||| ||||||||||||||| ||||||| || || ||||||||||||| |||| ||||| ||||| |
|
|
| T |
22815201 |
gacttggtagtgaatttggtagcccttttgtaggagaaagaacaaaaacaattccttggccactaaaaggtggatattgaggtcttattgcaaacacaaa |
22815300 |
T |
|
| Q |
618 |
agtagttgagaaagaagacacactttcactagaagtgtttttgaaaactattggatttggatagaaagcatgtcctttggctctttctatttcattggtg |
717 |
Q |
| |
|
|||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| | ||||||||| |
|
|
| T |
22815301 |
agtagttgagaaagaagacacactttcattggaagtgtttttgaaaactataggatttggatagaaagcatatcctttggctctttctgtatcattggtg |
22815400 |
T |
|
| Q |
718 |
agtcttagtaagccatttgaggttaactcagcaataccatcaagatataaatgtgatgattggaatccattatatatgaaactgttgtcttcactt |
813 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
22815401 |
agttttagtaagccatttgaggttaactcagcaataccatcaagatttaaatgtgatgattggaatccattatatatgaaactgttgtctacactt |
22815496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 418; E-Value: 0
Query Start/End: Original strand, 48 - 813
Target Start/End: Original strand, 22875623 - 22876385
Alignment:
| Q |
48 |
aggaagttcagagatttcaaggttttgagcttgaccattaaccttaaaactccaaccaaaaatataatgagaagctgcaagtaaccctgttgaagatgag |
147 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||| ||||||||||||||| |
|
|
| T |
22875623 |
aggaagttcagagatttcaagggtttgagcttgaccattaaccttaaaactccaaccaagaatataatgagaagctaaaattaaacctgttgaagatgag |
22875722 |
T |
|
| Q |
148 |
aatccaacatacattctattgttaagaattggagaaagatcattggtcaatgataacaaaggtcgtgttggttta--acaa-catcaattggagctaaag |
244 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||| || | |||| ||||||||||||| |
|
|
| T |
22875723 |
aatccaacatacattctattgttgagaattggagaaagatctttggtcaatgataacaaaggttgtgttggtttattactagcatctattggagctaaag |
22875822 |
T |
|
| Q |
245 |
taacattaatctttttgttcactccatcatattcaatccataccttcatataagatccgccgaaaaggtataatcccctcagataaccatcataatcatc |
344 |
Q |
| |
|
|||||| ||||||||| |||||||||||||| ||||||||||||| ||| | |||| | ||||||| |||| |||| | | | || ||| ||||| |
|
|
| T |
22875823 |
taacatcaatcttttttttcactccatcatagtcaatccatacctgcatgggatatccactgaaaagggataaatccctga---atcgattatattcatc |
22875919 |
T |
|
| Q |
345 |
atcataatatcctgcaggagttgaattagctgattgcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactcaaaatcttgaaca |
444 |
Q |
| |
|
| ||||||||| || ||||||| ||||||||| |||||||||||||||||| |||||||||||||||| |||||||| ||||||| | |||| |
|
|
| T |
22875920 |
gt---aatatcctgtagaagttgaaatagctgatttcaaatcattgatatcaattccaacatggttatcatcgatatcattaaactcattagtcaaaaca |
22876016 |
T |
|
| Q |
445 |
gtgtcaaactcaacagcaaaaacatggttgctactgtttccattgttggaattgttaaagagaccaaggtattgacctggtagtgaatctggtagccctt |
544 |
Q |
| |
|
| |||| |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| | ||||||||||| |
|
|
| T |
22876017 |
gaatcaagttcaacaccaaaaacatggttgctactgtttccattgtttgaattgttaaagagaccaaggtattgacgtggtagtgagtttggtagccctt |
22876116 |
T |
|
| Q |
545 |
ttgttggagaaataacaaaaacaattccatggccaccaagagttggatattgaggtattatggcaaatacaaaagtagttgagaaagaagacacactttc |
644 |
Q |
| |
|
|||| ||||||| ||||||||||||||||| |||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
22876117 |
ttgtaggagaaacaacaaaaacaattccatcaccactaatagttggatattgaggtcttatggcaaatacaaaagtagttgagaaagaagacacacttcc |
22876216 |
T |
|
| Q |
645 |
actagaagtgtttttgaaaactattggatttggatagaaagcatgtcctttggctctttctatttcattggtgagtcttagtaagccatttgaggttaac |
744 |
Q |
| |
|
| | |||||||||||||||||||| ||||||||||||||| |||||||||| | |||| | |||||||||||| ||||||||||||||||||||||| |
|
|
| T |
22876217 |
attggaagtgtttttgaaaactataggatttggatagaaaccatgtcctttttcatattctgtatcattggtgagttttagtaagccatttgaggttaac |
22876316 |
T |
|
| Q |
745 |
tcagcaataccatcaagatataaatgtgatgattggaatccattatatatgaaactgttgtcttcactt |
813 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
22876317 |
tcagcaataccatcaagatataaatttgatgattggaatccattatagatgaaactgttttcttcactt |
22876385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 411; E-Value: 0
Query Start/End: Original strand, 48 - 813
Target Start/End: Original strand, 22805019 - 22805778
Alignment:
| Q |
48 |
aggaagttcagagatttcaaggttttgagcttgaccattaaccttaaaactccaaccaaaaatataatgagaagctgcaagtaaccctgttgaagatgag |
147 |
Q |
| |
|
||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22805019 |
aggaaattgagagattacaaggttttgagcttgaccattaaccttaaaactccaaccaagaatataatgagaagctgcaagtaaccctgttgaagatgag |
22805118 |
T |
|
| Q |
148 |
aatccaacatacattctattgttaagaattggagaaagatcattggtcaatgataacaaaggtcgtgttggtttaacaacatcaattggagctaaagtaa |
247 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||| |||||| ||||||||||||||||| || |||||||||||||| |
|
|
| T |
22805119 |
aatccaacatacatactattgttaagaattggagaaagatctttggtcattgataacgaaggtcctgttggtttaacaacataaactggagctaaagtaa |
22805218 |
T |
|
| Q |
248 |
cattaatctttttgttcactccatcatattcaatccataccttcatataagatccgccgaaaaggtataatcccctcagataaccatcataatcatcatc |
347 |
Q |
| |
|
||| ||||||||| |||||||||||||| ||||||||||||| ||| | ||| | | |||||| || | || | | ||||| || |||| |
|
|
| T |
22805219 |
catcaatctttttcttcactccatcataatcaatccatacctgtataggatttccactggaaaggtctactgttctgatttgaccatgat------catc |
22805312 |
T |
|
| Q |
348 |
ataatatcctgcaggagttgaattagctgattgcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactcaaaatcttgaacagtg |
447 |
Q |
| |
|
||||| |||||| |||||| | |||||| || ||||||||||| ||||||| | ||||||| | | |||| ||||||||||||||| | |||| |
|
|
| T |
22805313 |
gtaataggctgcagtagttgagacaactgatttcagatcattgatattaataccatcgtggttattgtcaacatcaccaaactcaaaatctttagaagtg |
22805412 |
T |
|
| Q |
448 |
tcaaactcaacagcaaaaacatggttgctactgtttccattgttggaattgttaaagagaccaaggtattgacctggtagtgaatctggtagcccttttg |
547 |
Q |
| |
|
|||| |||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
22805413 |
tcaagttcaacaccaaaaacatggttgccactgtttccattgttggaatcattaaagagaccaaggtattgatttggtagtgaatttggtagcccttttg |
22805512 |
T |
|
| Q |
548 |
ttggagaaataacaaaaacaattccatggccaccaagagttggatattgaggtattatggcaaatacaaaagtagttgagaaagaagacacactttcact |
647 |
Q |
| |
|
||||||||| |||||||||||||||||||||| || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22805513 |
ttggagaaagaacaaaaacaattccatggccagtaaaaggtggatattgaggtattatggcaaatacaaaagtagttgagaaagaagacacactttcact |
22805612 |
T |
|
| Q |
648 |
agaagtgtttttgaaaactattggatttggatagaaagcatgtcctttggctctttctatttcattggtgagtcttagtaagccatttgaggttaactca |
747 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||| | || |||| | ||||||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
22805613 |
ggaagtgtttttgaaaactattggatttggatagaaagcatgacctattacttgttctgtatcattggtgagtcttagtatgccatctgaggttaactca |
22805712 |
T |
|
| Q |
748 |
gcaataccatcaagatataaatgtgatgattggaatccattatatatgaaactgttgtcttcactt |
813 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
22805713 |
gcaaaaccatcaagatataaatgtgatgattggaatccattatagatgaaactgttatcttcactt |
22805778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 359; E-Value: 0
Query Start/End: Original strand, 27 - 813
Target Start/End: Original strand, 22897952 - 22898732
Alignment:
| Q |
27 |
ctcatcaaatattgttagctcaggaagttcagagatttcaaggttttgagcttgaccattaaccttaaaactccaaccaaaaatataatgagaagctgca |
126 |
Q |
| |
|
|||| ||||| ||| ||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| | |
|
|
| T |
22897952 |
ctcaccaaatcttggtagcttaggaagttcagagattacaaggttttcagcttgaccattaaccttaaaactccaaccaagaatataatgagaagtgaaa |
22898051 |
T |
|
| Q |
127 |
agtaaccctgttgaagatgagaatccaacatacattctattgttaagaattggagaaagatcattggtcaatgataacaaaggtcgtgttggtttaacaa |
226 |
Q |
| |
|
| | | || || | ||||| |||||||||||||| |||||||| | ||||||||||||||| |||||||||| ||||||||| || |||||||||||| |
|
|
| T |
22898052 |
actgaaccagtagctgatgaaaatccaacatacatactattgtttaaaattggagaaagatctctggtcaatgacaacaaaggttgttttggtttaacaa |
22898151 |
T |
|
| Q |
227 |
catcaattggagctaaagtaacattaatctttttgttcactccatcatattcaatccataccttcatataagatccgccgaaaaggtataatcccctcag |
326 |
Q |
| |
|
||| |||||||||||||||||||| ||||||||| || | |||||||||||||||||||||| |||| | || | ||||||| || | | || |
|
|
| T |
22898152 |
cattaattggagctaaagtaacatcaatctttttcttttcaccatcatattcaatccatacctgcataggattgccactgaaaagggtcaaattcttgag |
22898251 |
T |
|
| Q |
327 |
ataaccatcataatcatcatcataatatcctgcaggagttgaattagctgattgcaaatcattgatatcaataccaacatggttatcattgatatcatca |
426 |
Q |
| |
|
| ||||| ||| ||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
22898252 |
ttgaccat--taa----catcataatatcctgcaggagttgatttagctgatttcaaatcattgatatcaataccaacatggttatcattgatatcatta |
22898345 |
T |
|
| Q |
427 |
aactcaaaatcttgaacagtgtcaaactcaacagcaaaaacatggttgctactgtttccattgttggaattgttaaagagaccaaggtattgacctggta |
526 |
Q |
| |
|
|||||| | || ||| |||| |||||| ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| | ||| |
|
|
| T |
22898346 |
aactcactactaataatagtatcaagttcaacaccaaaaacatggttgctactatttccattgttggatttgttaaagagaccaaggtattgactttgta |
22898445 |
T |
|
| Q |
527 |
gtgaatctggtagcccttttgttggagaaataacaaaaacaattccatggccaccaagagttggatattgaggtattatggcaaatacaaaagtagttga |
626 |
Q |
| |
|
|||||| ||||||||||||||| ||||| | ||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
22898446 |
gtgaatttggtagcccttttgtaggagagacaacaaaaacaattccatggccactaagagttggatattgaggtcttatggcaaacacaaaagtagttga |
22898545 |
T |
|
| Q |
627 |
gaaagaagacacactttcactagaagtgtttttgaaaactattggatttggatagaaagcatgtcctttggctctttctatttcattggtgagtcttagt |
726 |
Q |
| |
|
||||||||| |||||| || |||||||||| ||||||||||| ||||||||||||||||||||| |||| || | | |||||||||||||| ||| |
|
|
| T |
22898546 |
gaaagaagaaacacttccattagaagtgttcttgaaaactataggatttggatagaaagcatgtgctttttcttgcttggtatcattggtgagtctaagt |
22898645 |
T |
|
| Q |
727 |
aagccatttgaggttaactcagcaataccatcaagatataaatgtgatgattggaatccattatatatgaaactgttgtcttcactt |
813 |
Q |
| |
|
|||||||| |||||||| | |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||| |||| |
|
|
| T |
22898646 |
aagccattggaggttaaattagcaataccatcaagatataaatgtgatgattggaaaccattatagatgaaactgttatctttactt |
22898732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 355; E-Value: 0
Query Start/End: Original strand, 47 - 792
Target Start/End: Original strand, 22839752 - 22840500
Alignment:
| Q |
47 |
caggaagttcagagatttcaaggttttgagcttgaccattaaccttaaaactccaaccaaaaatataatgagaagctgcaagtaaccctgttgaagatga |
146 |
Q |
| |
|
||||||| |||||||||||||||||||||| ||| ||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
22839752 |
caggaaggtcagagatttcaaggttttgagattggccattaaccataaaactccaaccatgaatataatgagaagctgcaatgaaccctgttgaagatga |
22839851 |
T |
|
| Q |
147 |
gaatccaacatacattctattgttaagaattggagaaagatcattggtcaatgataacaaaggtcgtgttggtttaa---------caacatcaattgga |
237 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||| ||| ||||||||||| ||||| || |||| |
|
|
| T |
22839852 |
gaatccaacatacattctattgttgagaattggggaaagatctttggtcaatgataacgtcggttgtgttggtttatgactaaaaccaacactaaatgga |
22839951 |
T |
|
| Q |
238 |
gctaaagtaacattaatctttttgttcactccatcatattcaatccataccttcatataagatccgccgaaaaggtataatcccctcagataaccatcat |
337 |
Q |
| |
|
||||| ||||||| ||||||||| ||||||| |||||||||||||||||| | |||| | |||| | | | ||| |||| |||| | | | || || |
|
|
| T |
22839952 |
gctaaggtaacatcaatctttttcttcactctatcatattcaatccatacttgcataggatatccactggagagggataaatccctga---atcgattat |
22840048 |
T |
|
| Q |
338 |
aatcatcatcataatatcctgcaggagttgaattagctgattgcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactcaaaatc |
437 |
Q |
| |
|
| ||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
22840049 |
attcatcgt---aatatcctgcaggagttgaattagctgatttcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactcactact |
22840145 |
T |
|
| Q |
438 |
ttgaacagtgtcaaactcaacagcaaaaacatggttgctactgtttccattgttggaattgttaaagagaccaaggtattgacctggtagtgaatctggt |
537 |
Q |
| |
|
| ||| ||| |||| |||||| ||||||||||||||| || ||||||| ||||||| | ||||||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
22840146 |
tagaagagtatcaagttcaacaccaaaaacatggttgccaccgtttccaatgttggattggttaaagagaccaaggtattgacttggtagtgaatttggt |
22840245 |
T |
|
| Q |
538 |
agcccttttgttggagaaataacaaaaacaattccatggccaccaagagttggatattgaggtattatggcaaatacaaaagtagttgagaaagaagaca |
637 |
Q |
| |
|
||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||| || | |||||| ||||||||||||||||||||||||||| | |
|
|
| T |
22840246 |
agcccttttgtaggagaaataacgaaaacaattccatggccactaagagttggatatgaagattttatggaaaatacaaaagtagttgagaaagaagaaa |
22840345 |
T |
|
| Q |
638 |
cactttcactagaagtgtttttgaaaactattggatttggatagaaagcatgtcctttggctctttctatttcattggtgagtcttagtaagccatttga |
737 |
Q |
| |
|
||||| | || |||||||||||||||||||| ||||||||||||||||| |||||||| || || | | |||||||||||||||||||||||| |||| |
|
|
| T |
22840346 |
cacttccgctggaagtgtttttgaaaactataggatttggatagaaagcttgtcctttttcttgttttgtatcattggtgagtcttagtaagccagttga |
22840445 |
T |
|
| Q |
738 |
ggttaactcagcaataccatcaagatataaatgtgatgattggaatccattatat |
792 |
Q |
| |
|
|| ||||||||| |||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
22840446 |
ggctaactcagcggtaccatcaagatataaatttgatgattggaatccattatat |
22840500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 345; E-Value: 0
Query Start/End: Original strand, 47 - 813
Target Start/End: Original strand, 22830731 - 22831500
Alignment:
| Q |
47 |
caggaagttcagagatttcaaggttttgagcttgaccattaaccttaaaactccaaccaaaaatataatgagaagctgcaagtaaccctgttgaagatga |
146 |
Q |
| |
|
||||||| |||||||||||||||||||||| ||| ||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
22830731 |
caggaaggtcagagatttcaaggttttgagattggccattaaccataaaactccaaccatgaatataatgagaagctgcaatgaaccctgttgaagatga |
22830830 |
T |
|
| Q |
147 |
gaatccaacatacattctattgttaagaattggagaaagatcattggtcaatgataacaaaggtcgtgttggttt---------aacaacatcaattgga |
237 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||| ||| |||||||||| | ||||| || |||| |
|
|
| T |
22830831 |
gaatccaacatacattctattgttgagaattggggaaagatctttggtcaatgataacgtcggttgtgttggtttatgactaaaaccaacactaactgga |
22830930 |
T |
|
| Q |
238 |
gctaaagtaacattaatctttttgttcactccatcatattcaatccataccttcatataagatccgccgaaaaggtataatcccctcagataaccatcat |
337 |
Q |
| |
|
||||| ||||||| ||||||||| |||||||||||||||||||||||||||| |||| | ||| | | |||| |||| ||| | |||| || |
|
|
| T |
22830931 |
gctaaggtaacatcaatctttttcttcactccatcatattcaatccatacctgcataggatgtccactggtaagggataaattcctgaatcgaccagtat |
22831030 |
T |
|
| Q |
338 |
aatcatcatcataatatcctgcaggagttgaattagctgattgcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactcaaaatc |
437 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||||| |
|
|
| T |
22831031 |
------catcataatatcctgcaggagttgaattagctgatttcaaatcattgatatcaattccaacatgattatcattgatatcatcaaactcaaaatt |
22831124 |
T |
|
| Q |
438 |
ttgaacagtgtcaaactcaacagcaaaaacatggttgctactgtttccattgttggaattgttaaagagaccaaggtattgacctggtagtgaatctggt |
537 |
Q |
| |
|
|| | |||||||| ||||||| |||||||||||||||||||||||||| ||||||| | |||||||||||||| ||||||| ||||||||||| |||| |
|
|
| T |
22831125 |
tttacgagtgtcaagctcaacaccaaaaacatggttgctactgtttccaatgttggagtagttaaagagaccaaagtattgatttggtagtgaatttggt |
22831224 |
T |
|
| Q |
538 |
agcccttttgttggagaaataacaaaaacaattccatggccaccaagagttggatattgaggtattatggcaaatacaaaagtagttgagaaagaagaca |
637 |
Q |
| |
|
||||||||||| ||||||| ||||||||||||||||||||||| || || |||||| | | |||||| |||||||||||||||||||||||| |||| |
|
|
| T |
22831225 |
agcccttttgtaggagaaagaacaaaaacaattccatggccactaatagatggatacatggattttatggtaaatacaaaagtagttgagaaagatgaca |
22831324 |
T |
|
| Q |
638 |
cactttcactagaagtgtttttgaaaactattggatttggatagaaagcatgtcctttggctctttctatttcattggtgagtcttagtaagccatttga |
737 |
Q |
| |
|
||||| || | ||||||||||| |||||||| |||||||||||||||||| | || | || | | ||||||||||||||||||||||||| ||| |
|
|
| T |
22831325 |
cacttgcattcgaagtgtttttaaaaactatatgatttggatagaaagcatatgctgtatctggcccggtatcattggtgagtcttagtaagccatctga |
22831424 |
T |
|
| Q |
738 |
ggttaactcagcaataccatcaagatataaatgtgatgattggaatccattatatatgaaactgttgtcttcactt |
813 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||| |
|
|
| T |
22831425 |
agttaactcagcaataccatcaagatataaatgtgatgattggaaaccattatagatgaaactgctgtcttcactt |
22831500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 265; E-Value: 1e-147
Query Start/End: Original strand, 345 - 813
Target Start/End: Original strand, 22809645 - 22810113
Alignment:
| Q |
345 |
atcataatatcctgcaggagttgaattagctgattgcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactcaaaatcttgaaca |
444 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| | | ||| | |
|
|
| T |
22809645 |
atcataatatcctgcaggagttgaattagctgatttcaaatcattgatatcaataccaatatggttatcattgatatcatcaaactcactacttagaaga |
22809744 |
T |
|
| Q |
445 |
gtgtcaaactcaacagcaaaaacatggttgctactgtttccattgttggaattgttaaagagaccaaggtattgacctggtagtgaatctggtagccctt |
544 |
Q |
| |
|
|| || | |||||| | ||||||||||| |||||||||||||||||||| | ||||||||||||||| ||||||| || | ||||| ||| ||||||| |
|
|
| T |
22809745 |
gtatctagttcaacaccgaaaacatggttactactgtttccattgttggattggttaaagagaccaagatattgacttgcttttgaatttggcagccctt |
22809844 |
T |
|
| Q |
545 |
ttgttggagaaataacaaaaacaattccatggccaccaagagttggatattgaggtattatggcaaatacaaaagtagttgagaaagaagacacactttc |
644 |
Q |
| |
|
|||| || |||| |||||| |||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
22809845 |
ttgtaggtgaaacaacaaatacaattccatgggaactaagagttggatattgaggtcttatggcaaatacaaaagtagttgagaaagaagatacactttc |
22809944 |
T |
|
| Q |
645 |
actagaagtgtttttgaaaactattggatttggatagaaagcatgtcctttggctctttctatttcattggtgagtcttagtaagccatttgaggttaac |
744 |
Q |
| |
|
||| ||||||||||||||||| |||||||||||||||||||||||||| | |||| | ||||||||||||||||||||||||| || ||||||| |
|
|
| T |
22809945 |
actgatagtgtttttgaaaactacaggatttggatagaaagcatgtcctttttcatgttctgtatcattggtgagtcttagtaagccatctggggttaac |
22810044 |
T |
|
| Q |
745 |
tcagcaataccatcaagatataaatgtgatgattggaatccattatatatgaaactgttgtcttcactt |
813 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||| |||| |
|
|
| T |
22810045 |
tcagcaataccatcaagatataaatgtgatgattggaaaccattatagatgaaactgttatctttactt |
22810113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 344 - 813
Target Start/End: Original strand, 22893944 - 22894413
Alignment:
| Q |
344 |
catcataatatcctgcaggagttgaattagctgattgcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactcaaaatcttgaac |
443 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || || || |
|
|
| T |
22893944 |
catcataatatcctgcaggagttgaattagctgatttcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactcacgattttcaat |
22894043 |
T |
|
| Q |
444 |
agtgtcaaactcaacagcaaaaacatggttgctactgtttccattgttggaattgttaaagagaccaaggtattgacctggtagtgaatctggtagccct |
543 |
Q |
| |
|
||| |||| |||||| ||||||| ||||||||| |||||||||||||||| || |||||||||||||||| |||| | ||||||| |||||||||| |
|
|
| T |
22894044 |
agtatcaagttcaacaccaaaaacgtggttgctaggatttccattgttggaatcgtcaaagagaccaaggtatgaaccttggagtgaatttggtagccct |
22894143 |
T |
|
| Q |
544 |
tttgttggagaaataacaaaaacaattccatggccaccaagagttggatattgaggtattatggcaaatacaaaagtagttgagaaagaagacacacttt |
643 |
Q |
| |
|
||||| ||||||| ||||||||||||||||||||||| | ||||||| |||| || |||||||||||||||||||||||||||| ||||| |||||| |
|
|
| T |
22894144 |
tttgtaggagaaagaacaaaaacaattccatggccactataagttggaccttgatgtcttatggcaaatacaaaagtagttgagaatgaagaaacacttc |
22894243 |
T |
|
| Q |
644 |
cactagaagtgtttttgaaaactattggatttggatagaaagcatgtcctttggctctttctatttcattggtgagtcttagtaagccatttgaggttaa |
743 |
Q |
| |
|
|| | |||||||| || |||||||| || |||||||||||||||||| |||| || || | |||||||||||||||||||||||||| |||||||| |
|
|
| T |
22894244 |
cattggaagtgttcttcaaaactatagggtttggatagaaagcatgtgctttttcttgtttggtgtcattggtgagtcttagtaagccattggaggttaa |
22894343 |
T |
|
| Q |
744 |
ctcagcaataccatcaagatataaatgtgatgattggaatccattatatatgaaactgttgtcttcactt |
813 |
Q |
| |
|
| |||||||||||||||||| ||||| ||||||||||| ||||||| |||||||| |||||||||||| |
|
|
| T |
22894344 |
attagcaataccatcaagatacaaatgagatgattggaaatcattatagatgaaacttttgtcttcactt |
22894413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 411 - 788
Target Start/End: Original strand, 22880631 - 22881008
Alignment:
| Q |
411 |
atcattgatatcatcaaactcaaaatcttgaacagtgtcaaactcaacagcaaaaacatggttgctactgtttccattgttggaattgttaaagagacca |
510 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| || ||| |||||||||| |
|
|
| T |
22880631 |
atcattgatatcgtcaaactcaaaatcttgaacagtgtcaaactcaacagcaaaaacatggttgctaatgtttccagtgttgaaagtgtcaaagagacca |
22880730 |
T |
|
| Q |
511 |
aggtattgacctggtagtgaatctggtagcccttttgttggagaaataacaaaaacaattccatggccaccaagagttggatattgaggtattatggcaa |
610 |
Q |
| |
|
||||||| || |||||| |||| |||||||||||||||||| |||| ||||||||||| ||||||||||| | || || ||| || | | ||||||| |
|
|
| T |
22880731 |
aggtatttacttggtagcgaatttggtagcccttttgttggtgaaacaacaaaaacaagtccatggccacaagtagctgtatacctagatttgatggcaa |
22880830 |
T |
|
| Q |
611 |
atacaaaagtagttgagaaagaagacacactttcactagaagtgtttttgaaaactattggatttggatagaaagcatgtcctttggctctttctatttc |
710 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| | || |
|
|
| T |
22880831 |
atacaaaagtagttgagaaagaatacacactttcattggaagtgtttttgaaaactataggatttggatagaaagcatatcctttggctctttctgtgtc |
22880930 |
T |
|
| Q |
711 |
attggtgagtcttagtaagccatttgaggttaactcagcaataccatcaagatataaatgtgatgattggaatccatt |
788 |
Q |
| |
|
|||||||||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
22880931 |
attggtgagtcttagtaagccatttgagtttaccttagcaataccatcaagatataaatgtgatgaatggaatccatt |
22881008 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 342 - 688
Target Start/End: Original strand, 22885592 - 22885934
Alignment:
| Q |
342 |
atcatcataatatcctgcaggagttgaattagctgattgcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactcaaaatcttga |
441 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||| |
|
|
| T |
22885592 |
atcatcataatatcctgcaggagttgaattagctgatttcaaatcattgatatcaataccaatatggttatcattgatttcatcaaactcaaaattttga |
22885691 |
T |
|
| Q |
442 |
acagtgtcaaactcaacagcaaaaacatggttgctactgtttccattgttggaattgttaaagagaccaaggtattgacctggtagtgaatctggtagcc |
541 |
Q |
| |
|
||||||||| ||||| | ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| | | ||||||||| |||||||| |
|
|
| T |
22885692 |
tcagtgtcaagctcaataccaaaaacatggctgctactgtttccattgttggaattgtt--agagaccaaggtattaatattgtagtgaatttggtagcc |
22885789 |
T |
|
| Q |
542 |
cttttgttggagaaataacaaaaacaattccatggccaccaagagttggatattgaggtattatggcaaatacaaaagtagttgagaaagaagacacact |
641 |
Q |
| |
|
||||||| || |||||||||||||||||||||||||||| | |||||||||||| || | |||| ||||||| | || |||||||||||||||||||||| |
|
|
| T |
22885790 |
cttttgtaggtgaaataacaaaaacaattccatggccactatgagttggatattaagattttatagcaaataaagaattagttgagaaagaagacacact |
22885889 |
T |
|
| Q |
642 |
ttcactagaagtgtttttgaaaactattggatttggatagaaagcat |
688 |
Q |
| |
|
|||||| |||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
22885890 |
ttcact--gagtgtttttgaaaactataggatttggatagaaagcat |
22885934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 456 - 813
Target Start/End: Original strand, 22842264 - 22842639
Alignment:
| Q |
456 |
aacagcaaaaacatggttgctactgtttccattgttggaattgttaaagagaccaaggtattgacctggtagtgaatctggtagcccttttgttggagaa |
555 |
Q |
| |
|
|||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| || ||| |
|
|
| T |
22842264 |
aacaccaaaaacatggttgctactatttccattgttggaattgttaaagagaccaaggtattgacctggtagtgaatttggttgcccttttgtaggtgaa |
22842363 |
T |
|
| Q |
556 |
at----aacaa--aaacaattccatggccaccaagagtt------ggatattgaggtattatggcaaatacaaaagtagttgagaaagaagacacacttt |
643 |
Q |
| |
|
| ||||| ||||||| || ||||||| ||||||| |||| | ||| | |||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
22842364 |
agttgaaacaacaaaacaatcccgtggccactaagagttagttctggatctggagattttatggcaaataaaaaagtagttgagaaagaagacacacttt |
22842463 |
T |
|
| Q |
644 |
cactagaagtgtttttgaaaactattggatttggatagaaagcatgtcctttggctctttctatttcattggtgagtcttagtaagccatttgaggttaa |
743 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||| |||||||| |||||| | || | | ||||||||||||||| |||||||| ||||||||| |
|
|
| T |
22842464 |
cactagaagtgtttttgaaaactattggttttggatataaagcatgacctttgtattgttttgtatcattggtgagtcttggtaagccacctgaggttaa |
22842563 |
T |
|
| Q |
744 |
ctcagcaataccatcaagatataaatgtgatgattggaatcc------attatatatgaaactgttgtcttcactt |
813 |
Q |
| |
|
||||||||||||||||||||| ||||| ||||||||||||| |||||| ||||||||||||||||||||| |
|
|
| T |
22842564 |
ctcagcaataccatcaagatacaaatgaaatgattggaatcctctattattatagatgaaactgttgtcttcactt |
22842639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 155; E-Value: 8e-82
Query Start/End: Original strand, 48 - 278
Target Start/End: Original strand, 22913375 - 22913605
Alignment:
| Q |
48 |
aggaagttcagagatttcaaggttttgagcttgaccattaaccttaaaactccaaccaaaaatataatgagaagctgcaagtaaccctgttgaagatgag |
147 |
Q |
| |
|
|||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| | || | | ||||||||||||||| |
|
|
| T |
22913375 |
aggaagttcagagattacaagattttgagcttgaccattaaccttaaaactccaaccaagaatataatgagaagttagaattgaacctgttgaagatgag |
22913474 |
T |
|
| Q |
148 |
aatccaacatacattctattgttaagaattggagaaagatcattggtcaatgataacaaaggtcgtgttggtttaacaacatcaattggagctaaagtaa |
247 |
Q |
| |
|
|||||||||||||| ||| |||||||||||| ||||||||| ||| ||||||||||||||||| || ||||||||||||||| ||||||||||||||||| |
|
|
| T |
22913475 |
aatccaacatacatactagtgttaagaattgaagaaagatctttgttcaatgataacaaaggttgttttggtttaacaacattaattggagctaaagtaa |
22913574 |
T |
|
| Q |
248 |
cattaatctttttgttcactccatcatattc |
278 |
Q |
| |
|
||| ||||||||| ||||||||||||||||| |
|
|
| T |
22913575 |
catcaatctttttcttcactccatcatattc |
22913605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 150; E-Value: 7e-79
Query Start/End: Original strand, 32 - 294
Target Start/End: Original strand, 22858144 - 22858418
Alignment:
| Q |
32 |
caaatattgttagctcaggaagttcagagatttcaaggttttgagcttgaccattaaccttaaaactccaaccaaaaatataatgagaagctgcaagtaa |
131 |
Q |
| |
|
|||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||| ||| || |
|
|
| T |
22858144 |
caaatattcttagctcaggaagtttagagatttcaaggttttgagcttggccattaaccttaaaactccaaccaagaatataatgggaagctacaattac |
22858243 |
T |
|
| Q |
132 |
ccctgttgaagatgagaatccaacatacattctattgttaagaattggagaaagatcattggtcaatgataacaaaggtcgtgttggtttaacaac---- |
227 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || ||||||||||||||||||| |||||||||||| |
|
|
| T |
22858244 |
cccggttgaagatgagaatccaacatacattctattgttgagaattggagaaagatctttcgtgaatgataacaaaggtcgtgctggtttaacaacatta |
22858343 |
T |
|
| Q |
228 |
--------atcaattggagctaaagtaacattaatctttttgttcactccatcatattcaatccataccttcata |
294 |
Q |
| |
|
|| |||||||||||| ||||||| ||| ||||| ||||||||||||||||| |||||||||| |||| |
|
|
| T |
22858344 |
caaccaaaattaattggagctaatgtaacatcaatatttttcttcactccatcatattctatccatacctgcata |
22858418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 150; E-Value: 7e-79
Query Start/End: Original strand, 45 - 294
Target Start/End: Original strand, 22893651 - 22893900
Alignment:
| Q |
45 |
ctcaggaagttcagagatttcaaggttttgagcttgaccattaaccttaaaactccaaccaaaaatataatgagaagctgcaagtaaccctgttgaagat |
144 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| | || | | || || | ||| |
|
|
| T |
22893651 |
ctcaggaagttcagagattacaaggttttgagcttgaccattaatcttaaaactccaaccaagaatataatgagaagttagaaatgaaccagtagctgat |
22893750 |
T |
|
| Q |
145 |
gagaatccaacatacattctattgttaagaattggagaaagatcattggtcaatgataacaaaggtcgtgttggtttaacaacatcaattggagctaaag |
244 |
Q |
| |
|
|| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||| |||||||||||||| |
|
|
| T |
22893751 |
gaaaatccaacatacatactattgttaagaattggagaaagatctttggtcaatgataacaaaggttgttttggtttaacaacattaattggagctaaag |
22893850 |
T |
|
| Q |
245 |
taacattaatctttttgttcactccatcatattcaatccataccttcata |
294 |
Q |
| |
|
|||||| ||||||||| || | |||||||||||||||||||||| |||| |
|
|
| T |
22893851 |
taacatcaatctttttcttttcaccatcatattcaatccatacctgcata |
22893900 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 147; E-Value: 5e-77
Query Start/End: Original strand, 32 - 222
Target Start/End: Original strand, 22885310 - 22885500
Alignment:
| Q |
32 |
caaatattgttagctcaggaagttcagagatttcaaggttttgagcttgaccattaaccttaaaactccaaccaaaaatataatgagaagctgcaagtaa |
131 |
Q |
| |
|
|||||||| || ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||| ||| ||| |
|
|
| T |
22885310 |
caaatattcttggctcaggaagttcagagatttcaaggttttgagcttggctattaaccttaaaactccaaccaagaatataatgagaagctacaattaa |
22885409 |
T |
|
| Q |
132 |
ccctgttgaagatgagaatccaacatacattctattgttaagaattggagaaagatcattggtcaatgataacaaaggtcgtgttggttta |
222 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||| ||||||||||| |
|
|
| T |
22885410 |
ccctgttgaagatgagaatccaacatacattctattgttgagtattggagaaagatctttggtcaatgataacaaaggttgtgttggttta |
22885500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 140; E-Value: 7e-73
Query Start/End: Original strand, 602 - 813
Target Start/End: Original strand, 22858677 - 22858888
Alignment:
| Q |
602 |
ttatggcaaatacaaaagtagttgagaaagaagacacactttcactagaagtgtttttgaaaactattggatttggatagaaagcatgtcctttggctct |
701 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| || | || |
|
|
| T |
22858677 |
ttatggcaaataaaaaagtagttgagaaagaagacacagtttcactagaagtgtttttgaaaactataggatttggatagaaagcatgtgctgtatcttg |
22858776 |
T |
|
| Q |
702 |
ttctatttcattggtgagtcttagtaagccatttgaggttaactcagcaataccatcaagatataaatgtgatgattggaatccattatatatgaaactg |
801 |
Q |
| |
|
| || |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| | |
|
|
| T |
22858777 |
cccgatatcattggtgagtcttagtaagccagttgaagttaactcagcaataccatcaagatataaatgtgatgattggaatcctttatagatgaaaccg |
22858876 |
T |
|
| Q |
802 |
ttgtcttcactt |
813 |
Q |
| |
|
|||||||||||| |
|
|
| T |
22858877 |
ttgtcttcactt |
22858888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 32 - 287
Target Start/End: Original strand, 22809326 - 22809593
Alignment:
| Q |
32 |
caaatattgttagctcaggaagttcagagatttcaaggttttgagcttgaccattaaccttaaaactccaaccaaaaatataatgagaagctgcaagtaa |
131 |
Q |
| |
|
||||| || ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| | || | |
|
|
| T |
22809326 |
caaatgttcttagctcaggaagtttagagatatcaaggttttgagcttgaccattaaccttaaaactccaaccaagaacataatgagaagatagaataga |
22809425 |
T |
|
| Q |
132 |
ccctgttgaagatgagaatccaacatacattctattgttaagaattggagaaagatcattggtcaatgataacaaaggtcgtgttggtttaa-------- |
223 |
Q |
| |
|
||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |
|
|
| T |
22809426 |
acctgttgaagatgagaatccaacatacatactagtgttaagaattggagaaagatctttggtgaatgataacaaaggtcgtgttggtttaacaacatta |
22809525 |
T |
|
| Q |
224 |
----caacatcaattggagctaaagtaacattaatctttttgttcactccatcatattcaatccatac |
287 |
Q |
| |
|
|||||| |||||||||||||||| ||| ||||||||| || | |||||||||||||||||||| |
|
|
| T |
22809526 |
aaaccaacattaattggagctaaagtagcatcaatctttttcttttcaccatcatattcaatccatac |
22809593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 44 - 289
Target Start/End: Original strand, 22880288 - 22880542
Alignment:
| Q |
44 |
gctcaggaagttcagagatttcaaggttttgagcttgaccattaaccttaaaactccaaccaaaaatataatgagaagctgcaagtaaccctgttgaaga |
143 |
Q |
| |
|
||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| || ||||| ||||||||| |
|
|
| T |
22880288 |
gctcatgaagctcagagatttcaaggttttgagcttgaccattaaccttaaaactccaaccaagaacataatgagaagctaaaattaaccttgttgaaga |
22880387 |
T |
|
| Q |
144 |
tgagaatccaacatacattctattgttaagaattggagaaagatcattggtcaatgataacaaaggtcgtgttggttt---------aacaacatcaatt |
234 |
Q |
| |
|
||| |||||||||||||| |||||||| ||||||||||||||||| ||||||||||| |||||| ||||||||||||| | ||||| ||| |
|
|
| T |
22880388 |
tgataatccaacatacatactattgttgagaattggagaaagatctttggtcaatgacaacaaatgtcgtgttggtttattattaaaaccaacactaatc |
22880487 |
T |
|
| Q |
235 |
ggagctaaagtaacattaatctttttgttcactccatcatattcaatccatacct |
289 |
Q |
| |
|
|||||||| ||||| | ||||||||| |||||||||||||| ||||||||||||| |
|
|
| T |
22880488 |
ggagctaatgtaacctcaatctttttcttcactccatcatagtcaatccatacct |
22880542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 352 - 547
Target Start/End: Original strand, 22858470 - 22858665
Alignment:
| Q |
352 |
tatcctgcaggagttgaattagctgattgcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactcaaaatcttgaacagtgtcaa |
451 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||| |||||| ||||||||| ||||||||| |||||||||||||||||||| |||||||| |||||||| |
|
|
| T |
22858470 |
tatcctgcaggagttgaattagctgatttcaaattattgatgtcaataccagcatggttattattgatatcatcaaactcaagatcttgaatagtgtcaa |
22858569 |
T |
|
| Q |
452 |
actcaacagcaaaaacatggttgctactgtttccattgttggaattgttaaagagaccaaggtattgacctggtagtgaatctggtagcccttttg |
547 |
Q |
| |
|
|||||||||||| |||||||||||| |||||||| ||||||||| ||||||| ||||||||||||| ||| |||||||||||||||||||||| |
|
|
| T |
22858570 |
gctcaacagcaaacacatggttgctagtgtttccaatgttggaatcgttaaagggaccaaggtattggtttggaagtgaatctggtagcccttttg |
22858665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 345 - 800
Target Start/End: Original strand, 22913669 - 22914124
Alignment:
| Q |
345 |
atcataatatcctgcaggagttgaattagctgattgcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactcaaaatcttgaaca |
444 |
Q |
| |
|
||||||||||||||| | || || || |||||| |||| ||||||||||||| ||||||||||| |||||||||||||| ||||| || || | |
|
|
| T |
22913669 |
atcataatatcctgccgaagccgatttctctgatttcaaaccattgatatcaattccaacatggttgtcattgatatcatcgaactccgtattcataata |
22913768 |
T |
|
| Q |
445 |
gtgtcaaactcaacagcaaaaacatggttgctactgtttccattgttggaattgttaaagagaccaaggtattgacctggtagtgaatctggtagccctt |
544 |
Q |
| |
|
|| |||| ||| | | ||||||||||||| | ||||||||||||| || | || || |||||||||||||||| ||||||||||| ||||| ||||| |
|
|
| T |
22913769 |
gtatcaagctccaaaccaaaaacatggttattgttgtttccattgtttgattcattgaatagaccaaggtattgacttggtagtgaatttggtaaccctt |
22913868 |
T |
|
| Q |
545 |
ttgttggagaaataacaaaaacaattccatggccaccaagagttggatattgaggtattatggcaaatacaaaagtagttgagaaagaagacacactttc |
644 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||| |||| | ||| | | || | |||||||||| ||||||||||| ||||||||||| ||| | |
|
|
| T |
22913869 |
ttgttggagaaagaacaaaaacaattccatggccactaagattaggaaactcagattttatggcaaaaacaaaagtagtagagaaagaagatacattact |
22913968 |
T |
|
| Q |
645 |
actagaagtgtttttgaaaactattggatttggatagaaagcatg-tcctttggctctttctatttcattggtgagtcttagtaagccatttgaggttaa |
743 |
Q |
| |
|
|||| || ||||||||||| || ||||||||||||||||| ||||| | | | | | |||||||| | ||||||||| |||||||||||||| |
|
|
| T |
22913969 |
actacttccattgttgaaaactatagggtttggatagaaagcatgacccttttgttgtct-tgaatcattggttaatcttagtaaaccatttgaggttaa |
22914067 |
T |
|
| Q |
744 |
ctcagcaataccatcaagatataaatgtgatgattggaatccattatatatgaaact |
800 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| ||| ||||||||| ||||||| |
|
|
| T |
22914068 |
ttcagcaacaccatcaagatataaatgtgatgatttgaaaccattatatgtgaaact |
22914124 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 48 - 294
Target Start/End: Original strand, 22825959 - 22826205
Alignment:
| Q |
48 |
aggaagttcagagatttcaaggttttgagcttgaccattaaccttaaaactccaaccaaaaatataatgagaagctgcaagtaaccctgttgaagatgag |
147 |
Q |
| |
|
|||||||||||| ||| |||| ||||||||||||||||||| ||||||||| ||||||| |||||||||||||| || | | || || | |||||| |
|
|
| T |
22825959 |
aggaagttcagaaattacaagattttgagcttgaccattaagcttaaaacttcaaccaagaatataatgagaagtgaaaactgaaccagtagctgatgag |
22826058 |
T |
|
| Q |
148 |
aatccaacatacattctattgttaagaattggagaaagatcattggtcaatgataacaaaggtcgtgttggtttaacaacatcaattggagctaaagtaa |
247 |
Q |
| |
|
|||||||||||||| |||||||| | |||||||| |||||| |||||||||| ||||||||| || ||||||||||||||| ||||||||||||||||| |
|
|
| T |
22826059 |
aatccaacatacatactattgttcaaaattggaggaagatctctggtcaatgaaaacaaaggttgttttggtttaacaacattaattggagctaaagtaa |
22826158 |
T |
|
| Q |
248 |
cattaatctttttgttcactccatcatattcaatccataccttcata |
294 |
Q |
| |
|
||| ||||||||| || | ||||||||||| |||||||||| |||| |
|
|
| T |
22826159 |
catcaatctttttattttcaccatcatattctatccatacctgcata |
22826205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 391 - 473
Target Start/End: Original strand, 22922209 - 22922291
Alignment:
| Q |
391 |
atatcaataccaacatggttatcattgatatcatcaaactcaaaatcttgaacagtgtcaaactcaacagcaaaaacatggtt |
473 |
Q |
| |
|
||||| |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
22922209 |
atatctataccaacatggttatcattaatatcaccaaactcaaaatcttgaacagtgtcaaactcaacagcaaaaagatggtt |
22922291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 387 - 473
Target Start/End: Complemental strand, 22933386 - 22933300
Alignment:
| Q |
387 |
attgatatcaataccaacatggttatcattgatatcatcaaactcaaaatcttgaacagtgtcaaactcaacagcaaaaacatggtt |
473 |
Q |
| |
|
|||||| || |||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||| |||||||||| |||||| |
|
|
| T |
22933386 |
attgatgtctataccaacatggttatcattaatatcatcaaactcaaagtcttgagcagtgtcaaactcgacagcaaaaatatggtt |
22933300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 342 - 395
Target Start/End: Original strand, 22880589 - 22880642
Alignment:
| Q |
342 |
atcatcataatatcctgcaggagttgaattagctgattgcaaatcattgatatc |
395 |
Q |
| |
|
|||||||||||||||||||| | ||||||| |||||| ||||||||||||||| |
|
|
| T |
22880589 |
atcatcataatatcctgcagaaattgaatttactgatttcaaatcattgatatc |
22880642 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 754 - 786
Target Start/End: Original strand, 22885937 - 22885969
Alignment:
| Q |
754 |
ccatcaagatataaatgtgatgattggaatcca |
786 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
22885937 |
ccatcaagatataaatgtgatgattggaatcca |
22885969 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 446; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 446; E-Value: 0
Query Start/End: Original strand, 33 - 813
Target Start/End: Complemental strand, 21151028 - 21150245
Alignment:
| Q |
33 |
aaatattgttagctcaggaagttcagagatttcaaggttttgagcttgaccattaaccttaaaactccaaccaaaaatataatgagaagctgcaagtaac |
132 |
Q |
| |
|
||||| ||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
21151028 |
aaatactgttacttcaggaagttcagagatttcaaggttttgagccaggccattaaccttaaaactccaaccaagaatataatgagaagctgcaagtaac |
21150929 |
T |
|
| Q |
133 |
cctgttgaagatgagaatccaacatacattctattgttaagaattggagaaagatcattggtcaatgataacaaaggtcgtgttggttt---------aa |
223 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||| |||| |||||||||||| |||||||||||||||||||||| || |||||| | |
|
|
| T |
21150928 |
cctgttgaagatgagaatccaacatacatactattgttgagaactggagaaagatctttggtcaatgataacaaaggtcttgctggttttttattaaaac |
21150829 |
T |
|
| Q |
224 |
caacatcaattggagctaaagtaacattaatctttttgttcactccatcatattcaatccataccttcatataagatccgccgaaaaggtataatcccct |
323 |
Q |
| |
|
||||| ||||||||||||||||||||||||||| || || | |||||||||||||||||||| | |||| | |||| | ||||||| |||| | | |
|
|
| T |
21150828 |
caacactaattggagctaaagtaacattaatcttcttcttttcaccatcatattcaatccatacatgcataggatatccactgaaaagggataaatcatt |
21150729 |
T |
|
| Q |
324 |
cagataaccatcataatcatcatcataatatcctgcaggagttgaattagctgattgcaaatcattgatatcaataccaacatggttatcattgatatca |
423 |
Q |
| |
|
| | ||||||| |||||||| |||| ||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
21150728 |
ga---atccatcattatcatcat---aatagcctgcagaagttgagttagctgatttcaaatcattgatatcaataccaacatggttattattgatatca |
21150635 |
T |
|
| Q |
424 |
tcaaactcaaaatcttgaacagtgtcaaactcaacagcaaaaacatggttgctactgtttccattgttggaattgttaaagagaccaaggtattgacctg |
523 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
21150634 |
tcaaactcaaaatcttgaacagtgtcaagctcaacaccaaaaacatggttgctactgtttccattgttggaattgttaaagagaccaaggtattgtgttg |
21150535 |
T |
|
| Q |
524 |
gtagtgaatctggtagcccttttgttggagaaataacaaaaacaattccatggccaccaagagttggatattgaggtattatggcaaatacaaaagtagt |
623 |
Q |
| |
|
||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
21150534 |
gtagtgaatttggtagctcttttgtaggagaaataacaaaaacaattccatggccaccaagagttggatattgaggtcttatggcaaatacaaaagtagt |
21150435 |
T |
|
| Q |
624 |
tgagaaagaagacacactttcactagaagtgtttttgaaaactattggatttggatagaaagcatgtcctttggctctttctatttcattggtgagtctt |
723 |
Q |
| |
|
||| |||||| |||||||||| | |||||||||| ||||||||| |||||||||||||||||||| ||| | | ||| | ||| | ||||||||| |
|
|
| T |
21150434 |
tgaaaaagaaaacacactttcgccggaagtgttttcgaaaactataggatttggatagaaagcatgccctatttcatgatctgtatcactagtgagtctt |
21150335 |
T |
|
| Q |
724 |
agtaagccatttgaggttaactcagcaataccatcaagatataaatgtgatgattggaatccattatatatgaaactgttgtcttcactt |
813 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |
|
|
| T |
21150334 |
agtaagccatttgaggttaactcagcaataccatcaagatataaatgtgatgattggaatccattatagatgaaactgttatcttcactt |
21150245 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 376 - 473
Target Start/End: Original strand, 15628278 - 15628375
Alignment:
| Q |
376 |
gattgcaaatcattgatatcaataccaacatggttatcattgatatcatcaaactcaaaatcttgaacagtgtcaaactcaacagcaaaaacatggtt |
473 |
Q |
| |
|
|||| |||| ||||||| || |||||||||||||||||||| |||||||||||| |||| ||| ||||||||||| ||||||||||||| |||||| |
|
|
| T |
15628278 |
gatttcaaaccattgatgtctataccaacatggttatcattaatatcatcaaacccaaagtctaagacagtgtcaaattcaacagcaaaaagatggtt |
15628375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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