View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10284_low_13 (Length: 252)
Name: NF10284_low_13
Description: NF10284
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10284_low_13 |
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Alignment Details
Target: chr2 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 42351726 - 42351962
Alignment:
| Q |
1 |
aggaaacgtcaaatgtttgataaagaccaaagatctacttataagttgttgnnnnnnnaatttggtaagaagatctacttataagttatagcccatgctt |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
42351726 |
aggaaacgtcaaatgtttgataaagaccaaagatctacttataagttgttgtttttttaatttggtaagaagatctacttataagttatagcccatgctt |
42351825 |
T |
|
| Q |
101 |
aattcgactatactgtataattcagaagaaaaaactactagaatgagttgttatttccataatgtaatctttcatggctaatgagagtgacagtttttgt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42351826 |
aattcgactatactgtataattcagaagaaaaaactactaaaatgagttgttatttccataatgtaatctttcatggctaatgagagtgacagtttttgt |
42351925 |
T |
|
| Q |
201 |
ggtagcacaatcttaaatgaggtagtaactactaact |
237 |
Q |
| |
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|||||||||||||||||| |||||||||||||||||| |
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| T |
42351926 |
ggtagcacaatcttaaataaggtagtaactactaact |
42351962 |
T |
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