View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10284_low_3 (Length: 520)
Name: NF10284_low_3
Description: NF10284
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10284_low_3 |
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Alignment Details
Target: chr8 (Bit Score: 472; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 472; E-Value: 0
Query Start/End: Original strand, 15 - 510
Target Start/End: Original strand, 22329613 - 22330108
Alignment:
| Q |
15 |
aaaaacatgcagattaaataactgagctagcttgctcaaaagttgttgtttatttccatcttggtgtaaaaccccagttgcagaatgaagcattttctcc |
114 |
Q |
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| T |
22329613 |
aaaaacatgcagattaaataactgagctagcttgctcaaaagttgttgtttatttccatcttggtgtaaaaccccagttgcagaatgaagcattttctcc |
22329712 |
T |
|
| Q |
115 |
ttgtcacgaaaaaggtagtaaacccaaataacccgacatataaattttgcatattcaaacttgtgtatgattttggctttggttgttggtataaatggtt |
214 |
Q |
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| T |
22329713 |
ttgtcacgaaaaaggtagtaaacccaaataacccgacatataaattttgcatattcaaacttgtgtatgattttggctttggttgttggtatatatggtt |
22329812 |
T |
|
| Q |
215 |
aatgctgtctttgttacaaacgaggataggtcttaatttaactgctttctactccaacaagtgtttttgcttccttgtcatggaaaaacaattggtagta |
314 |
Q |
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| T |
22329813 |
aatgctgtctttgttacaaatgaggataggtcttaatttaactgctttctactccaacaagtttttttgcttccttgtcatggaaaaacaattggtagta |
22329912 |
T |
|
| Q |
315 |
aaatctttatgatcatatcatatcatatcaatctctttcgtgcttgaatttttggtagcatttgactgagaagtcattgtccatgaacaatagaaactgt |
414 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22329913 |
aaatctttatgatcatatcatatcatatcaatctctttcgtgcttgaatttttggtagcatttgactgagaagtcattgtccatgaacaatagaaactgt |
22330012 |
T |
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| Q |
415 |
tgacgaaagaaacaggttgtgtattgtatgagagttgattccgaccttggtaaaagggaagtatcctagattcattacggtttgttttctcctttg |
510 |
Q |
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||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |
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| T |
22330013 |
tgatgaaagaaacaggttgtgtattgtatgagagttgattccgaccttggtaaaagggaagtatcctagattcattatggtttgtttgctcctttg |
22330108 |
T |
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