View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10284_low_9 (Length: 270)
Name: NF10284_low_9
Description: NF10284
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10284_low_9 |
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Alignment Details
Target: chr2 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 19 - 260
Target Start/End: Complemental strand, 6293432 - 6293191
Alignment:
| Q |
19 |
tgttggtcctattttctgcaaaatagggttacctttaaatcatgttcatttttgagattctgaaagtgcctttgtgttcaactaggtatcttttttggcc |
118 |
Q |
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| T |
6293432 |
tgttggtcctattttctgcaaaatagggttacctttaaatcatgttcatttttgagattctgaaagtgcctttgtgttcaactaggtatcttttttggcc |
6293333 |
T |
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| Q |
119 |
actttgaaagaagtaaaattccaatatgtacttaatgtatagacatgaatcccacaataaaggaaggtcttccttcacacataaaggattgaaaccaaca |
218 |
Q |
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| T |
6293332 |
actttgaaagaagtaaaattccaatatgtacttaatgtatagacatgaatcccacaataaaggaaggtcttccttcacacataaaggattgaaaccaaca |
6293233 |
T |
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| Q |
219 |
catatacaaacatccaatataccaagttttggtatccctttg |
260 |
Q |
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| T |
6293232 |
catatacaaacatccaatataccaagttttggtatccctttg |
6293191 |
T |
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