View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10285_high_3 (Length: 320)
Name: NF10285_high_3
Description: NF10285
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10285_high_3 |
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Alignment Details
Target: chr2 (Bit Score: 285; Significance: 1e-160; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 18 - 310
Target Start/End: Original strand, 37837649 - 37837941
Alignment:
| Q |
18 |
aaacgtgtgtgaaacttataaaatgggtaagaattaaaagagatcatgtttatcctaggttcttaataggcaaagcaataaatattcattaaaggagaat |
117 |
Q |
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| T |
37837649 |
aaacgtgtgtgaaacttataaaatgggtaagaattaaaagagatcatgtttatcctaggttcttaataggcaaagcaataaatattcattaaaggagaat |
37837748 |
T |
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| Q |
118 |
agccataataaattgtggagtaaattaaattaccattaataaattttaaataagtgcaactgctatagtagcgtgatactttccttacagctgttgaaac |
217 |
Q |
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| T |
37837749 |
agccataataaattgtggagtgaattaaattaccattaataaattttaaataagtgcaactgctatagtagcgtgatactttccttacagctgttgaaac |
37837848 |
T |
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| Q |
218 |
tttaaattacaaacctaattttcactcaaacatcaacatgggaccatcatcgaaagaaccttagtctacatgtccaaaagatacgacgttcat |
310 |
Q |
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| T |
37837849 |
tttaaattacaaacctaattttcactcaaacatcaacatgggaccatcatcgaaagaaccttagtctgcatgtccaaaagatacgacgttcat |
37837941 |
T |
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