View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10287_high_4 (Length: 241)

Name: NF10287_high_4
Description: NF10287
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10287_high_4
NF10287_high_4
[»] chr2 (10 HSPs)
chr2 (129-209)||(28769167-28769247)
chr2 (1-37)||(19886124-19886160)
chr2 (1-37)||(28775264-28775300)
chr2 (1-37)||(5888099-5888135)
chr2 (1-37)||(21142635-21142671)
chr2 (1-37)||(23777504-23777540)
chr2 (1-37)||(42177427-42177463)
chr2 (145-204)||(28763307-28763366)
chr2 (1-37)||(28030677-28030713)
chr2 (1-33)||(33128831-33128863)
[»] scaffold0420 (1 HSPs)
scaffold0420 (1-37)||(7641-7677)
[»] scaffold0247 (1 HSPs)
scaffold0247 (1-37)||(23065-23101)
[»] scaffold0037 (1 HSPs)
scaffold0037 (1-37)||(95754-95790)
[»] scaffold0021 (1 HSPs)
scaffold0021 (1-37)||(167771-167807)
[»] chr7 (14 HSPs)
chr7 (1-37)||(7823470-7823506)
chr7 (1-37)||(27101092-27101128)
chr7 (1-37)||(27177175-27177211)
chr7 (1-35)||(12900055-12900089)
chr7 (1-37)||(371872-371908)
chr7 (1-37)||(7830781-7830817)
chr7 (1-37)||(14250357-14250393)
chr7 (1-37)||(15759572-15759608)
chr7 (1-33)||(15950255-15950287)
chr7 (1-33)||(26009605-26009637)
chr7 (1-37)||(3050366-3050402)
chr7 (1-33)||(10990165-10990197)
chr7 (1-37)||(16419258-16419294)
chr7 (1-37)||(48622135-48622171)
[»] chr6 (15 HSPs)
chr6 (1-37)||(16375851-16375887)
chr6 (1-37)||(16383175-16383211)
chr6 (1-37)||(27653445-27653481)
chr6 (1-37)||(1556767-1556803)
chr6 (1-37)||(12415288-12415324)
chr6 (1-33)||(14625593-14625625)
chr6 (1-37)||(15741658-15741694)
chr6 (1-37)||(16240780-16240816)
chr6 (1-37)||(19630073-19630109)
chr6 (1-33)||(25898578-25898610)
chr6 (1-37)||(1657202-1657238)
chr6 (1-37)||(9276694-9276730)
chr6 (1-33)||(16814466-16814498)
chr6 (1-33)||(21774414-21774446)
chr6 (1-37)||(25951478-25951514)
[»] chr5 (11 HSPs)
chr5 (1-37)||(21073054-21073090)
chr5 (1-37)||(21931857-21931893)
chr5 (1-37)||(21938027-21938063)
chr5 (3-37)||(29187748-29187782)
chr5 (1-37)||(10777427-10777463)
chr5 (1-37)||(17471046-17471082)
chr5 (1-37)||(34940046-34940082)
chr5 (1-37)||(18777449-18777485)
chr5 (1-33)||(19500634-19500666)
chr5 (3-31)||(22365948-22365976)
chr5 (1-33)||(23543056-23543088)
[»] chr1 (7 HSPs)
chr1 (1-37)||(24521929-24521965)
chr1 (1-37)||(42443051-42443087)
chr1 (1-37)||(20255083-20255119)
chr1 (1-33)||(21654539-21654571)
chr1 (1-37)||(22238258-22238294)
chr1 (4-37)||(18059217-18059250)
chr1 (1-37)||(46524138-46524174)
[»] scaffold1500 (1 HSPs)
scaffold1500 (1-37)||(972-1008)
[»] scaffold0376 (1 HSPs)
scaffold0376 (1-37)||(210-246)
[»] scaffold0369 (1 HSPs)
scaffold0369 (1-37)||(4484-4520)
[»] scaffold0225 (1 HSPs)
scaffold0225 (1-37)||(22995-23031)
[»] scaffold0193 (1 HSPs)
scaffold0193 (1-33)||(32103-32135)
[»] scaffold0191 (1 HSPs)
scaffold0191 (1-37)||(6915-6951)
[»] scaffold0023 (2 HSPs)
scaffold0023 (1-37)||(60662-60698)
scaffold0023 (1-37)||(153464-153500)
[»] chr8 (14 HSPs)
chr8 (1-37)||(17346297-17346333)
chr8 (1-37)||(17353292-17353328)
chr8 (1-37)||(23511987-23512023)
chr8 (1-37)||(24105667-24105703)
chr8 (5-37)||(13661720-13661752)
chr8 (5-37)||(13720383-13720415)
chr8 (1-37)||(16038329-16038365)
chr8 (5-37)||(16195986-16196018)
chr8 (1-33)||(17142492-17142524)
chr8 (1-37)||(18613166-18613202)
chr8 (1-33)||(21844039-21844071)
chr8 (1-33)||(21851432-21851464)
chr8 (1-37)||(22148208-22148244)
chr8 (1-37)||(28837029-28837065)
[»] chr4 (9 HSPs)
chr4 (1-37)||(7131524-7131560)
chr4 (1-33)||(10644972-10645004)
chr4 (3-37)||(8378928-8378962)
chr4 (1-37)||(14499652-14499688)
chr4 (5-37)||(14996899-14996931)
chr4 (5-37)||(18248963-18248995)
chr4 (1-37)||(19021245-19021281)
chr4 (1-37)||(27954800-27954836)
chr4 (1-37)||(37477918-37477954)
[»] chr3 (13 HSPs)
chr3 (1-37)||(9302585-9302621)
chr3 (1-37)||(15467812-15467848)
chr3 (1-33)||(16933414-16933446)
chr3 (1-37)||(44229750-44229786)
chr3 (1-37)||(11476638-11476674)
chr3 (1-33)||(12257273-12257305)
chr3 (1-37)||(12901553-12901589)
chr3 (1-37)||(15936094-15936130)
chr3 (1-37)||(15937936-15937972)
chr3 (1-37)||(18911754-18911790)
chr3 (1-37)||(22275960-22275996)
chr3 (1-37)||(23493140-23493176)
chr3 (1-37)||(38168700-38168736)
[»] scaffold0892 (1 HSPs)
scaffold0892 (1-37)||(4170-4206)
[»] scaffold0761 (1 HSPs)
scaffold0761 (1-37)||(1032-1068)
[»] scaffold0574 (1 HSPs)
scaffold0574 (1-37)||(8947-8983)
[»] scaffold0367 (1 HSPs)
scaffold0367 (1-33)||(16769-16801)
[»] scaffold0335 (1 HSPs)
scaffold0335 (1-37)||(5018-5054)
[»] scaffold0215 (2 HSPs)
scaffold0215 (1-37)||(8812-8848)
scaffold0215 (1-37)||(15710-15746)
[»] scaffold0139 (2 HSPs)
scaffold0139 (1-33)||(13521-13553)
scaffold0139 (1-33)||(20586-20618)
[»] scaffold0092 (1 HSPs)
scaffold0092 (1-37)||(10207-10243)
[»] scaffold0076 (1 HSPs)
scaffold0076 (1-37)||(46363-46399)
[»] scaffold0032 (2 HSPs)
scaffold0032 (1-37)||(6361-6397)
scaffold0032 (1-37)||(12810-12846)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-33)||(131340-131372)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-37)||(4670-4706)
[»] scaffold0017 (2 HSPs)
scaffold0017 (1-37)||(44323-44359)
scaffold0017 (1-37)||(54626-54662)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-37)||(7970-8006)


Alignment Details
Target: chr2 (Bit Score: 69; Significance: 4e-31; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 28769167 - 28769247
Alignment:
Q  129 acatgcatctaaaagaaaaaccataatagtaatcataaagaaagagtgtattattcttcataccaaatgatctaaaccatg 209  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  28769167 acatgcatctgaaagaaaaaccataatagtaatcataaagaaagagcgtattattcttcataccaaacgatctaaaccatg 28769247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 19886160 - 19886124
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  19886160 ccttctaatacggtaatccatttaaatgcacccaatg 19886124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 28775300 - 28775264
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  28775300 ccttctaatacggtaatccatttaaatgcacccaatg 28775264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 5888135 - 5888099
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    |||||||||||||||||||| ||||||||||||||||    
T  5888135 ccttctaatacggtaatccaattaaatgcacccaatg 5888099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 21142635 - 21142671
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    ||||||||||||||||||||| |||||||||||||||    
T  21142635 ccttctaatacggtaatccatgtaaatgcacccaatg 21142671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 23777540 - 23777504
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    ||||||||||||||||||||| |||||||||||||||    
T  23777540 ccttctaatacggtaatccatgtaaatgcacccaatg 23777504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 42177463 - 42177427
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    ||||||||||||||||||||| |||||||||||||||    
T  42177463 ccttctaatacggtaatccatgtaaatgcacccaatg 42177427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 204
Target Start/End: Original strand, 28763307 - 28763366
Alignment:
Q  145 aaaaccataatagtaatcataaagaaagagtgtattattcttcataccaaatgatctaaa 204  Q
    |||||||||||||| ||||||||||||||    ||||||||||||||||| | |||||||    
T  28763307 aaaaccataatagtcatcataaagaaagaacaaattattcttcataccaattcatctaaa 28763366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 28030713 - 28030677
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    |||||||||||||||||||||  ||||||||||||||    
T  28030713 ccttctaatacggtaatccatgaaaatgcacccaatg 28030677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 33128831 - 33128863
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcaccc 33  Q
    |||||||||| ||||||||||||||||||||||    
T  33128831 ccttctaataaggtaatccatttaaatgcaccc 33128863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 7677 - 7641
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  7677 ccttctaatacggtaatccatttaaatgcacccaatg 7641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 23101 - 23065
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  23101 ccttctaatacggtaatccatttaaatgcacccaatg 23065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 95754 - 95790
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  95754 ccttctaatacggtaatccatttaaatgcacccaatg 95790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 167807 - 167771
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  167807 ccttctaatacggtaatccatttaaatgcacccaatg 167771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000005; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 7823470 - 7823506
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  7823470 ccttctaatacggtaatccatttaaatgcacccaatg 7823506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 27101128 - 27101092
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  27101128 ccttctaatacggtaatccatttaaatgcacccaatg 27101092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 27177175 - 27177211
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  27177175 ccttctaatacggtaatccatttaaatgcacccaatg 27177211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 12900055 - 12900089
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaa 35  Q
    |||||||||||||||||||||||||||||||||||    
T  12900055 ccttctaatacggtaatccatttaaatgcacccaa 12900089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 371872 - 371908
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    ||||||||||||||||||||| |||||||||||||||    
T  371872 ccttctaatacggtaatccatgtaaatgcacccaatg 371908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 7830781 - 7830817
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    ||||||||||||||||||||||||||||||| |||||    
T  7830781 ccttctaatacggtaatccatttaaatgcactcaatg 7830817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 14250393 - 14250357
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    ||||||||||||||||||||| |||||||||||||||    
T  14250393 ccttctaatacggtaatccatgtaaatgcacccaatg 14250357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 15759608 - 15759572
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    ||||||||||||||||||||| |||||||||||||||    
T  15759608 ccttctaatacggtaatccatgtaaatgcacccaatg 15759572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 15950287 - 15950255
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcaccc 33  Q
    |||||||||||||||||||||||||||||||||    
T  15950287 ccttctaatacggtaatccatttaaatgcaccc 15950255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 26009637 - 26009605
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcaccc 33  Q
    |||||||||||||||||||||||||||||||||    
T  26009637 ccttctaatacggtaatccatttaaatgcaccc 26009605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 3050366 - 3050402
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    |||||||||||||||||||||  ||||||||||||||    
T  3050366 ccttctaatacggtaatccatgaaaatgcacccaatg 3050402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 10990165 - 10990197
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcaccc 33  Q
    |||||||||| ||||||||||||||||||||||    
T  10990165 ccttctaatatggtaatccatttaaatgcaccc 10990197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 16419258 - 16419294
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  16419258 ccttctaatacggtaatccaattaaatgcaccaaatg 16419294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 48622171 - 48622135
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    |||||||||| |||||||||| |||||||||||||||    
T  48622171 ccttctaataaggtaatccatgtaaatgcacccaatg 48622135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000005; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 16375887 - 16375851
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  16375887 ccttctaatacggtaatccatttaaatgcacccaatg 16375851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 16383211 - 16383175
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  16383211 ccttctaatacggtaatccatttaaatgcacccaatg 16383175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 27653481 - 27653445
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  27653481 ccttctaatacggtaatccatttaaatgcacccaatg 27653445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 1556767 - 1556803
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    ||||||||||||||||||||| |||||||||||||||    
T  1556767 ccttctaatacggtaatccatgtaaatgcacccaatg 1556803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 12415324 - 12415288
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    ||||||||||||||||||||| |||||||||||||||    
T  12415324 ccttctaatacggtaatccatgtaaatgcacccaatg 12415288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 14625625 - 14625593
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcaccc 33  Q
    |||||||||||||||||||||||||||||||||    
T  14625625 ccttctaatacggtaatccatttaaatgcaccc 14625593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 15741694 - 15741658
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    ||||||||||||||||||||| |||||||||||||||    
T  15741694 ccttctaatacggtaatccatgtaaatgcacccaatg 15741658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 16240780 - 16240816
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    ||||||||||||||||||||| |||||||||||||||    
T  16240780 ccttctaatacggtaatccatgtaaatgcacccaatg 16240816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 19630073 - 19630109
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    ||||||||||||||||||||| |||||||||||||||    
T  19630073 ccttctaatacggtaatccatgtaaatgcacccaatg 19630109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 25898610 - 25898578
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcaccc 33  Q
    |||||||||||||||||||||||||||||||||    
T  25898610 ccttctaatacggtaatccatttaaatgcaccc 25898578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 1657238 - 1657202
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    |||||||||||||||||| || |||||||||||||||    
T  1657238 ccttctaatacggtaatctatgtaaatgcacccaatg 1657202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 9276694 - 9276730
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    ||||||||||| |||||||||| ||||||||||||||    
T  9276694 ccttctaatacagtaatccattaaaatgcacccaatg 9276730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 16814498 - 16814466
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcaccc 33  Q
    |||| ||||||||||||||||||||||||||||    
T  16814498 ccttataatacggtaatccatttaaatgcaccc 16814466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 21774446 - 21774414
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcaccc 33  Q
    ||||||||||||||||||||| |||||||||||    
T  21774446 ccttctaatacggtaatccatgtaaatgcaccc 21774414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 25951514 - 25951478
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    |||||||||||||||||||||||||||  ||||||||    
T  25951514 ccttctaatacggtaatccatttaaataaacccaatg 25951478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000005; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 21073090 - 21073054
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  21073090 ccttctaatacggtaatccatttaaatgcacccaatg 21073054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 21931893 - 21931857
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  21931893 ccttctaatacggtaatccatttaaatgcacccaatg 21931857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 21938063 - 21938027
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  21938063 ccttctaatacggtaatccatttaaatgcacccaatg 21938027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 37
Target Start/End: Complemental strand, 29187782 - 29187748
Alignment:
Q  3 ttctaatacggtaatccatttaaatgcacccaatg 37  Q
    |||||||||||||||||||||||||||||||||||    
T  29187782 ttctaatacggtaatccatttaaatgcacccaatg 29187748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 10777463 - 10777427
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    |||||||||||||||||||||| ||||||||||||||    
T  10777463 ccttctaatacggtaatccattaaaatgcacccaatg 10777427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 17471082 - 17471046
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    ||||||||||||||||||||| |||||||||||||||    
T  17471082 ccttctaatacggtaatccatgtaaatgcacccaatg 17471046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 34940046 - 34940082
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    ||||||||||||||||||||| |||||||||||||||    
T  34940046 ccttctaatacggtaatccatgtaaatgcacccaatg 34940082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 18777485 - 18777449
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  18777485 ccttctaatactgtaatccatgtaaatgcacccaatg 18777449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 19500634 - 19500666
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcaccc 33  Q
    ||||||||||||||||||||| |||||||||||    
T  19500634 ccttctaatacggtaatccatgtaaatgcaccc 19500666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 31
Target Start/End: Complemental strand, 22365976 - 22365948
Alignment:
Q  3 ttctaatacggtaatccatttaaatgcac 31  Q
    |||||||||||||||||||||||||||||    
T  22365976 ttctaatacggtaatccatttaaatgcac 22365948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 23543056 - 23543088
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcaccc 33  Q
    ||||||||||||||||||||| |||||||||||    
T  23543056 ccttctaatacggtaatccatgtaaatgcaccc 23543088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000005; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 24521965 - 24521929
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  24521965 ccttctaatacggtaatccatttaaatgcacccaatg 24521929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 42443087 - 42443051
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  42443087 ccttctaatacggtaatccatttaaatgcacccaatg 42443051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 20255083 - 20255119
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    ||||||||||||||||||||| |||||||||||||||    
T  20255083 ccttctaatacggtaatccatgtaaatgcacccaatg 20255119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 21654571 - 21654539
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcaccc 33  Q
    |||||||||||||||||||||||||||||||||    
T  21654571 ccttctaatacggtaatccatttaaatgcaccc 21654539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 22238294 - 22238258
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    ||||||||||||||||||||| |||||||||||||||    
T  22238294 ccttctaatacggtaatccatgtaaatgcacccaatg 22238258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 37
Target Start/End: Complemental strand, 18059250 - 18059217
Alignment:
Q  4 tctaatacggtaatccatttaaatgcacccaatg 37  Q
    |||||||||||||||||| |||||||||||||||    
T  18059250 tctaatacggtaatccatgtaaatgcacccaatg 18059217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 46524138 - 46524174
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    ||||||||||||||||||||  |||||||||||||||    
T  46524138 ccttctaatacggtaatccacgtaaatgcacccaatg 46524174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1500 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1500
Description:

Target: scaffold1500; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 1008 - 972
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    ||||||||||||||||||||| |||||||||||||||    
T  1008 ccttctaatacggtaatccatgtaaatgcacccaatg 972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 210 - 246
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    |||||||||||||||||||||||||||| ||||||||    
T  210 ccttctaatacggtaatccatttaaatgaacccaatg 246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 4484 - 4520
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    ||||||||||||||||||||| |||||||||||||||    
T  4484 ccttctaatacggtaatccatgtaaatgcacccaatg 4520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 22995 - 23031
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    ||||||||||||||||||||| |||||||||||||||    
T  22995 ccttctaatacggtaatccatgtaaatgcacccaatg 23031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 32135 - 32103
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcaccc 33  Q
    |||||||||||||||||||||||||||||||||    
T  32135 ccttctaatacggtaatccatttaaatgcaccc 32103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 6951 - 6915
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    ||||||||||||||||||||| |||||||||||||||    
T  6951 ccttctaatacggtaatccatgtaaatgcacccaatg 6915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 60698 - 60662
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    ||||||||||||||||||||| |||||||||||||||    
T  60698 ccttctaatacggtaatccatgtaaatgcacccaatg 60662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 153500 - 153464
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    |||||||||||| |||||||| |||||||||||||||    
T  153500 ccttctaatacgttaatccatgtaaatgcacccaatg 153464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 33; Significance: 0.000000001; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 17346297 - 17346333
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    ||||||||||||||||||||| |||||||||||||||    
T  17346297 ccttctaatacggtaatccatgtaaatgcacccaatg 17346333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 17353292 - 17353328
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    ||||||||||||||||||||| |||||||||||||||    
T  17353292 ccttctaatacggtaatccatgtaaatgcacccaatg 17353328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 23511987 - 23512023
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    ||||||||||||||||||||| |||||||||||||||    
T  23511987 ccttctaatacggtaatccatgtaaatgcacccaatg 23512023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 24105703 - 24105667
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    ||||||||||||||||||||| |||||||||||||||    
T  24105703 ccttctaatacggtaatccatgtaaatgcacccaatg 24105667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 13661752 - 13661720
Alignment:
Q  5 ctaatacggtaatccatttaaatgcacccaatg 37  Q
    ||||||||||||||||| |||||||||||||||    
T  13661752 ctaatacggtaatccatgtaaatgcacccaatg 13661720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 13720415 - 13720383
Alignment:
Q  5 ctaatacggtaatccatttaaatgcacccaatg 37  Q
    ||||||||||||||||| |||||||||||||||    
T  13720415 ctaatacggtaatccatgtaaatgcacccaatg 13720383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 16038365 - 16038329
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    |||||||||||||||||||||  ||||||||||||||    
T  16038365 ccttctaatacggtaatccatgaaaatgcacccaatg 16038329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 37
Target Start/End: Original strand, 16195986 - 16196018
Alignment:
Q  5 ctaatacggtaatccatttaaatgcacccaatg 37  Q
    ||||||||||||||||| |||||||||||||||    
T  16195986 ctaatacggtaatccatgtaaatgcacccaatg 16196018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 17142524 - 17142492
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcaccc 33  Q
    ||||||||||||||||||||| |||||||||||    
T  17142524 ccttctaatacggtaatccatgtaaatgcaccc 17142492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 18613166 - 18613202
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    |||||||||||||||||| || |||||||||||||||    
T  18613166 ccttctaatacggtaatctatgtaaatgcacccaatg 18613202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 21844071 - 21844039
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcaccc 33  Q
    ||||||||||||||||||| |||||||||||||    
T  21844071 ccttctaatacggtaatccctttaaatgcaccc 21844039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 21851464 - 21851432
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcaccc 33  Q
    ||||||||||||||||||| |||||||||||||    
T  21851464 ccttctaatacggtaatccctttaaatgcaccc 21851432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 22148208 - 22148244
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    |||||||||||||||||| || |||||||||||||||    
T  22148208 ccttctaatacggtaatctatgtaaatgcacccaatg 22148244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 28837029 - 28837065
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  28837029 ccttctaatacagtaatccatgtaaatgcacccaatg 28837065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 33; Significance: 0.000000001; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 7131560 - 7131524
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    ||||||||||||||||||||| |||||||||||||||    
T  7131560 ccttctaatacggtaatccatgtaaatgcacccaatg 7131524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 10644972 - 10645004
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcaccc 33  Q
    |||||||||||||||||||||||||||||||||    
T  10644972 ccttctaatacggtaatccatttaaatgcaccc 10645004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 37
Target Start/End: Original strand, 8378928 - 8378962
Alignment:
Q  3 ttctaatacggtaatccatttaaatgcacccaatg 37  Q
    ||||||||||||||||||| |||||||||||||||    
T  8378928 ttctaatacggtaatccatgtaaatgcacccaatg 8378962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 14499688 - 14499652
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    |||||||||||||||||||||  ||||||||||||||    
T  14499688 ccttctaatacggtaatccatgaaaatgcacccaatg 14499652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 37
Target Start/End: Original strand, 14996899 - 14996931
Alignment:
Q  5 ctaatacggtaatccatttaaatgcacccaatg 37  Q
    ||||||||||||||||| |||||||||||||||    
T  14996899 ctaatacggtaatccatgtaaatgcacccaatg 14996931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 37
Target Start/End: Original strand, 18248963 - 18248995
Alignment:
Q  5 ctaatacggtaatccatttaaatgcacccaatg 37  Q
    |||||| ||||||||||||||||||||||||||    
T  18248963 ctaataaggtaatccatttaaatgcacccaatg 18248995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 19021245 - 19021281
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    |||||||||||||||||||||  ||||||||||||||    
T  19021245 ccttctaatacggtaatccatgaaaatgcacccaatg 19021281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 27954800 - 27954836
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    |||||||||||||||||||||||||||| || |||||    
T  27954800 ccttctaatacggtaatccatttaaatgtactcaatg 27954836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 37477918 - 37477954
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    |||||||||||||||||| || |||||||||||||||    
T  37477918 ccttctaatacggtaatctatgtaaatgcacccaatg 37477954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 33; Significance: 0.000000001; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 9302621 - 9302585
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    ||||||||||||||||||||| |||||||||||||||    
T  9302621 ccttctaatacggtaatccatgtaaatgcacccaatg 9302585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 15467848 - 15467812
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    ||||||||||||||||||||| |||||||||||||||    
T  15467848 ccttctaatacggtaatccatgtaaatgcacccaatg 15467812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 16933446 - 16933414
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcaccc 33  Q
    |||||||||||||||||||||||||||||||||    
T  16933446 ccttctaatacggtaatccatttaaatgcaccc 16933414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 44229750 - 44229786
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    ||||||||||||||||||||| |||||||||||||||    
T  44229750 ccttctaatacggtaatccatgtaaatgcacccaatg 44229786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 11476674 - 11476638
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    |||||||||||||||||||||  ||||||||||||||    
T  11476674 ccttctaatacggtaatccatgaaaatgcacccaatg 11476638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 12257305 - 12257273
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcaccc 33  Q
    ||||||||||||||||||||| |||||||||||    
T  12257305 ccttctaatacggtaatccatgtaaatgcaccc 12257273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 12901589 - 12901553
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    ||||||||||||||||||||| |||||||| ||||||    
T  12901589 ccttctaatacggtaatccatgtaaatgcatccaatg 12901553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 15936130 - 15936094
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    |||||||||||||||||||||  ||||||||||||||    
T  15936130 ccttctaatacggtaatccatgaaaatgcacccaatg 15936094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 15937972 - 15937936
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    |||||||||||||||||||||  ||||||||||||||    
T  15937972 ccttctaatacggtaatccatgaaaatgcacccaatg 15937936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 18911754 - 18911790
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    |||||||||| |||||||||| |||||||||||||||    
T  18911754 ccttctaatatggtaatccatgtaaatgcacccaatg 18911790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 22275960 - 22275996
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  22275960 ccttctaatacggtaatccatgtaaatgcaccaaatg 22275996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 23493140 - 23493176
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    |||||||||||||||||| || |||||||||||||||    
T  23493140 ccttctaatacggtaatctatgtaaatgcacccaatg 23493176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 38168700 - 38168736
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    |||||||||||||||||||||  ||||||||||||||    
T  38168700 ccttctaatacggtaatccatgaaaatgcacccaatg 38168736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0892 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0892
Description:

Target: scaffold0892; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 4170 - 4206
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    |||||||||||||| |||||| |||||||||||||||    
T  4170 ccttctaatacggttatccatgtaaatgcacccaatg 4206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 1068 - 1032
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    |||||||||||||||||||||  ||||||||||||||    
T  1068 ccttctaatacggtaatccatgaaaatgcacccaatg 1032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 8983 - 8947
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    ||||||||||||||||||||| |||||||| ||||||    
T  8983 ccttctaatacggtaatccatgtaaatgcatccaatg 8947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 16801 - 16769
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcaccc 33  Q
    ||||||||||||||||||||| |||||||||||    
T  16801 ccttctaatacggtaatccatgtaaatgcaccc 16769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 5054 - 5018
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    |||||||||||||||||||||  ||||||||||||||    
T  5054 ccttctaatacggtaatccatgaaaatgcacccaatg 5018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 8848 - 8812
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    ||||||||||||||||||||  |||||||||||||||    
T  8848 ccttctaatacggtaatccacgtaaatgcacccaatg 8812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 15746 - 15710
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    ||||||||||||||||||||  |||||||||||||||    
T  15746 ccttctaatacggtaatccacgtaaatgcacccaatg 15710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 13553 - 13521
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcaccc 33  Q
    ||||||||||||||||||||| |||||||||||    
T  13553 ccttctaatacggtaatccatgtaaatgcaccc 13521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 20618 - 20586
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcaccc 33  Q
    ||||||||||||||||||||| |||||||||||    
T  20618 ccttctaatacggtaatccatgtaaatgcaccc 20586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 10243 - 10207
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    ||||||||||||||||||||| |||||||| ||||||    
T  10243 ccttctaatacggtaatccatgtaaatgcatccaatg 10207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 46363 - 46399
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    ||||||||||||||||||||  |||||||||||||||    
T  46363 ccttctaatacggtaatccacgtaaatgcacccaatg 46399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 6397 - 6361
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    ||||||||||||||||||||| |||||||| ||||||    
T  6397 ccttctaatacggtaatccatgtaaatgcatccaatg 6361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 12846 - 12810
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    ||||||||||||||||||||| |||||||| ||||||    
T  12846 ccttctaatacggtaatccatgtaaatgcatccaatg 12810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 131340 - 131372
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcaccc 33  Q
    ||||||||||||||||||||| |||||||||||    
T  131340 ccttctaatacggtaatccatgtaaatgcaccc 131372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 4706 - 4670
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    |||||||||||||||||| || |||||||||||||||    
T  4706 ccttctaatacggtaatcaatgtaaatgcacccaatg 4670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 44323 - 44359
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  44323 ccttctaatacggtaatccatgtaaatacacccaatg 44359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 54626 - 54662
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  54626 ccttctaatacggtaatccatgtaaatacacccaatg 54662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 7970 - 8006
Alignment:
Q  1 ccttctaatacggtaatccatttaaatgcacccaatg 37  Q
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T  7970 ccttctaatacggtaatccaattaaatgcaccaaatg 8006  T

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