View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10287_high_8 (Length: 206)
Name: NF10287_high_8
Description: NF10287
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10287_high_8 |
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Alignment Details
Target: chr5 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 29 - 189
Target Start/End: Complemental strand, 36204289 - 36204132
Alignment:
| Q |
29 |
cacagtccaagggttttgaaggaaaccaaaaagctggacattaaacaaggaaaaacaagtacctcatgactaaaatatgattcaggaagaaaagaaagat |
128 |
Q |
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| T |
36204289 |
cacagtccaagggttttgaaggaaaccacaaagctggacattaaacaaggaaaaacaagtacctcatgactaaaatatgattcaggaggaaaagaaagat |
36204190 |
T |
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| Q |
129 |
tctctccttctttggtagaagtagaaccaagctcattcttggaagcattggggtcacaact |
189 |
Q |
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|||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
36204189 |
tctctc---ctttggtagaagtagaaccaagctcattcttggaagcattggggtcccaact |
36204132 |
T |
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