View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10287_low_2 (Length: 334)

Name: NF10287_low_2
Description: NF10287
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10287_low_2
NF10287_low_2
[»] chr7 (41 HSPs)
chr7 (17-273)||(1546268-1546524)
chr7 (92-259)||(45359392-45359559)
chr7 (92-259)||(39859130-39859297)
chr7 (72-238)||(37796103-37796269)
chr7 (92-259)||(6602391-6602558)
chr7 (92-259)||(24228310-24228477)
chr7 (92-257)||(23953861-23954026)
chr7 (114-270)||(6056844-6057000)
chr7 (131-255)||(35693275-35693399)
chr7 (92-259)||(34776816-34776983)
chr7 (92-246)||(33038711-33038865)
chr7 (92-254)||(40784402-40784564)
chr7 (131-259)||(13168218-13168346)
chr7 (92-259)||(30940326-30940493)
chr7 (92-254)||(46996608-46996770)
chr7 (92-257)||(2167535-2167700)
chr7 (131-259)||(47386110-47386238)
chr7 (132-259)||(23906162-23906289)
chr7 (92-259)||(27665966-27666133)
chr7 (92-259)||(29996415-29996582)
chr7 (92-259)||(38474044-38474211)
chr7 (146-259)||(46439431-46439544)
chr7 (90-259)||(48852248-48852417)
chr7 (131-270)||(31913564-31913703)
chr7 (193-260)||(48704337-48704404)
chr7 (36-111)||(1547679-1547754)
chr7 (131-270)||(23962399-23962538)
chr7 (131-258)||(27955465-27955592)
chr7 (136-270)||(46867825-46867958)
chr7 (92-259)||(56386-56552)
chr7 (203-258)||(2492493-2492548)
chr7 (131-173)||(37115513-37115555)
chr7 (198-259)||(4322494-4322555)
chr7 (188-257)||(38613615-38613684)
chr7 (190-270)||(17199070-17199150)
chr7 (195-259)||(34691133-34691197)
chr7 (195-259)||(45463808-45463872)
chr7 (72-180)||(13018069-13018179)
chr7 (114-173)||(45463748-45463807)
chr7 (100-247)||(46812495-46812642)
chr7 (191-254)||(47341588-47341651)
[»] chr2 (33 HSPs)
chr2 (79-273)||(17946137-17946331)
chr2 (33-273)||(7744040-7744280)
chr2 (94-259)||(42519126-42519291)
chr2 (92-259)||(14389005-14389172)
chr2 (92-259)||(19908167-19908334)
chr2 (92-259)||(44709666-44709833)
chr2 (51-259)||(2766949-2767157)
chr2 (51-255)||(16763091-16763294)
chr2 (51-259)||(40560238-40560446)
chr2 (131-259)||(17696301-17696429)
chr2 (92-259)||(39664669-39664836)
chr2 (92-248)||(37417329-37417485)
chr2 (131-237)||(42879450-42879556)
chr2 (92-173)||(16377204-16377285)
chr2 (92-259)||(39455225-39455392)
chr2 (191-270)||(40097703-40097782)
chr2 (92-254)||(15432384-15432546)
chr2 (191-259)||(10716804-10716872)
chr2 (131-270)||(862202-862341)
chr2 (92-255)||(6797563-6797726)
chr2 (92-254)||(25619716-25619878)
chr2 (131-269)||(62710-62849)
chr2 (193-260)||(11315257-11315324)
chr2 (51-125)||(7745274-7745348)
chr2 (35-125)||(17948929-17949019)
chr2 (92-254)||(29909566-29909728)
chr2 (188-246)||(42001761-42001819)
chr2 (220-259)||(38148659-38148698)
chr2 (92-254)||(39303-39465)
chr2 (198-259)||(11022935-11022996)
chr2 (131-160)||(11315335-11315364)
chr2 (131-184)||(13999902-13999955)
chr2 (198-259)||(28246804-28246865)
[»] chr1 (30 HSPs)
chr1 (36-273)||(51121905-51122142)
chr1 (92-259)||(4855868-4856034)
chr1 (92-259)||(34778040-34778206)
chr1 (51-259)||(50555998-50556206)
chr1 (92-259)||(15104497-15104664)
chr1 (92-259)||(25278269-25278436)
chr1 (92-259)||(37344398-37344565)
chr1 (92-259)||(27087339-27087505)
chr1 (92-259)||(33602545-33602712)
chr1 (131-259)||(6818579-6818707)
chr1 (131-259)||(2869674-2869802)
chr1 (134-270)||(43868712-43868848)
chr1 (92-259)||(31238396-31238563)
chr1 (92-254)||(46638713-46638875)
chr1 (92-255)||(46583461-46583624)
chr1 (92-254)||(42134538-42134700)
chr1 (136-259)||(3013371-3013494)
chr1 (92-254)||(45380890-45381052)
chr1 (92-254)||(31801689-31801851)
chr1 (92-254)||(36895416-36895578)
chr1 (192-258)||(18183846-18183912)
chr1 (191-259)||(26225455-26225523)
chr1 (188-254)||(33685155-33685221)
chr1 (92-173)||(51896139-51896220)
chr1 (195-259)||(5783502-5783566)
chr1 (114-173)||(5783442-5783501)
chr1 (92-155)||(27940664-27940727)
chr1 (78-125)||(51123557-51123604)
chr1 (188-242)||(44157585-44157639)
chr1 (231-259)||(51896086-51896114)
[»] chr5 (22 HSPs)
chr5 (78-270)||(27349198-27349380)
chr5 (92-259)||(17574374-17574540)
chr5 (92-259)||(30468181-30468348)
chr5 (92-259)||(7267899-7268065)
chr5 (132-259)||(18624909-18625036)
chr5 (92-259)||(34327691-34327858)
chr5 (92-259)||(8539731-8539898)
chr5 (92-247)||(36057526-36057681)
chr5 (134-255)||(2179885-2180006)
chr5 (92-255)||(35292287-35292450)
chr5 (92-254)||(38177999-38178161)
chr5 (92-254)||(38205223-38205385)
chr5 (92-255)||(43317965-43318128)
chr5 (92-254)||(18728508-18728670)
chr5 (131-248)||(38597040-38597157)
chr5 (131-259)||(2854229-2854356)
chr5 (140-255)||(28819391-28819506)
chr5 (131-245)||(24496838-24496952)
chr5 (92-259)||(24541112-24541280)
chr5 (92-254)||(33256456-33256618)
chr5 (231-259)||(21841186-21841214)
chr5 (231-259)||(32135750-32135778)
[»] chr3 (46 HSPs)
chr3 (92-259)||(53190681-53190847)
chr3 (92-259)||(23293091-23293258)
chr3 (92-259)||(41977806-41977972)
chr3 (92-259)||(42279563-42279730)
chr3 (92-259)||(51684666-51684833)
chr3 (92-259)||(54898493-54898659)
chr3 (131-259)||(7884795-7884922)
chr3 (92-259)||(27899002-27899169)
chr3 (92-259)||(35905634-35905800)
chr3 (92-259)||(2226074-2226240)
chr3 (92-259)||(17515366-17515533)
chr3 (131-254)||(24382799-24382922)
chr3 (92-259)||(30599839-30600006)
chr3 (131-270)||(41623747-41623886)
chr3 (131-259)||(43765232-43765360)
chr3 (131-259)||(48830727-48830855)
chr3 (132-259)||(600805-600932)
chr3 (92-255)||(21348779-21348942)
chr3 (168-235)||(33050289-33050356)
chr3 (92-259)||(46112543-46112710)
chr3 (92-259)||(2660268-2660435)
chr3 (115-270)||(5125880-5126035)
chr3 (92-259)||(44794263-44794430)
chr3 (92-258)||(2977231-2977397)
chr3 (114-259)||(44276117-44276262)
chr3 (92-254)||(48633933-48634099)
chr3 (131-259)||(46197815-46197943)
chr3 (92-259)||(3152139-3152306)
chr3 (131-254)||(33852576-33852699)
chr3 (131-254)||(45257126-45257249)
chr3 (114-260)||(5133074-5133220)
chr3 (92-258)||(33113083-33113248)
chr3 (92-257)||(31887355-31887520)
chr3 (131-259)||(2377124-2377252)
chr3 (76-139)||(33047553-33047616)
chr3 (92-206)||(40508865-40508979)
chr3 (92-259)||(19987518-19987682)
chr3 (92-248)||(23774208-23774363)
chr3 (131-258)||(1845879-1846006)
chr3 (92-254)||(18430177-18430339)
chr3 (92-254)||(23888678-23888840)
chr3 (193-259)||(26449192-26449258)
chr3 (188-248)||(51454158-51454218)
chr3 (215-270)||(17238261-17238316)
chr3 (92-159)||(45898349-45898416)
chr3 (198-259)||(41944715-41944776)
[»] chr8 (33 HSPs)
chr8 (92-259)||(8609709-8609875)
chr8 (92-259)||(13108258-13108424)
chr8 (92-259)||(38547284-38547450)
chr8 (93-259)||(13486020-13486186)
chr8 (131-259)||(9673086-9673214)
chr8 (92-259)||(5036501-5036672)
chr8 (34-147)||(5075366-5075479)
chr8 (51-259)||(7745033-7745241)
chr8 (92-259)||(41825565-41825732)
chr8 (100-254)||(42897680-42897834)
chr8 (98-259)||(9184445-9184606)
chr8 (91-259)||(26242235-26242403)
chr8 (132-259)||(41042505-41042632)
chr8 (92-254)||(37525929-37526091)
chr8 (92-259)||(27691210-27691377)
chr8 (133-259)||(42941871-42941997)
chr8 (92-173)||(13282534-13282615)
chr8 (92-247)||(22272392-22272547)
chr8 (117-254)||(8654580-8654717)
chr8 (99-270)||(11788384-11788555)
chr8 (92-254)||(462278-462438)
chr8 (133-259)||(40339601-40339727)
chr8 (97-258)||(38882699-38882860)
chr8 (195-259)||(28433638-28433702)
chr8 (174-254)||(33160054-33160134)
chr8 (92-259)||(33708725-33708892)
chr8 (131-260)||(15145662-15145791)
chr8 (191-270)||(6164658-6164737)
chr8 (114-173)||(40020622-40020681)
chr8 (49-111)||(15562437-15562499)
chr8 (92-254)||(33750290-33750452)
chr8 (35-125)||(44620671-44620761)
chr8 (191-239)||(11722730-11722778)
[»] chr6 (18 HSPs)
chr6 (49-259)||(14338376-14338586)
chr6 (92-255)||(20523422-20523585)
chr6 (92-259)||(9398716-9398883)
chr6 (92-259)||(13613483-13613650)
chr6 (131-259)||(7049852-7049980)
chr6 (72-259)||(6899521-6899708)
chr6 (51-259)||(10568414-10568622)
chr6 (139-259)||(11355325-11355445)
chr6 (92-240)||(32439012-32439159)
chr6 (116-259)||(32516957-32517100)
chr6 (131-271)||(25171998-25172138)
chr6 (193-259)||(24662615-24662681)
chr6 (132-173)||(7372945-7372986)
chr6 (114-173)||(17952029-17952088)
chr6 (188-259)||(30891276-30891347)
chr6 (131-173)||(34343930-34343972)
chr6 (198-259)||(17951964-17952025)
chr6 (198-259)||(35175785-35175846)
[»] chr4 (41 HSPs)
chr4 (91-259)||(41761647-41761815)
chr4 (92-259)||(51011982-51012148)
chr4 (136-257)||(4519476-4519597)
chr4 (131-259)||(42980730-42980858)
chr4 (92-259)||(49523180-49523347)
chr4 (92-254)||(35996119-35996281)
chr4 (91-259)||(2693154-2693321)
chr4 (131-259)||(11601765-11601893)
chr4 (131-259)||(48813882-48814010)
chr4 (131-270)||(27382212-27382351)
chr4 (136-259)||(48646648-48646771)
chr4 (134-259)||(41781637-41781762)
chr4 (131-260)||(50131257-50131386)
chr4 (131-259)||(35404346-35404474)
chr4 (193-259)||(11255841-11255907)
chr4 (136-254)||(51041837-51041955)
chr4 (92-259)||(43519480-43519647)
chr4 (100-254)||(2827468-2827622)
chr4 (198-259)||(32652240-32652301)
chr4 (114-269)||(26296785-26296940)
chr4 (114-173)||(32652177-32652236)
chr4 (92-246)||(44558407-44558561)
chr4 (86-159)||(7149589-7149662)
chr4 (195-259)||(39083777-39083841)
chr4 (195-259)||(39189520-39189584)
chr4 (131-219)||(44972506-44972594)
chr4 (92-254)||(2350410-2350575)
chr4 (114-173)||(5484618-5484677)
chr4 (92-155)||(10372711-10372774)
chr4 (114-173)||(39083717-39083776)
chr4 (114-173)||(39921572-39921631)
chr4 (114-173)||(43779854-43779913)
chr4 (114-160)||(13450980-13451026)
chr4 (193-259)||(25993653-25993719)
chr4 (198-259)||(5484681-5484742)
chr4 (198-259)||(42880683-42880744)
chr4 (198-259)||(43779789-43779850)
chr4 (198-259)||(44994209-44994270)
chr4 (76-173)||(52868136-52868233)
chr4 (114-170)||(39189460-39189516)
chr4 (231-259)||(52868069-52868097)
[»] scaffold1454 (1 HSPs)
scaffold1454 (131-259)||(1358-1485)
[»] scaffold0564 (1 HSPs)
scaffold0564 (130-259)||(8354-8483)
[»] scaffold0129 (1 HSPs)
scaffold0129 (131-270)||(4554-4693)
[»] scaffold0058 (2 HSPs)
scaffold0058 (92-259)||(3350-3517)
scaffold0058 (92-259)||(4522-4689)
[»] scaffold0024 (1 HSPs)
scaffold0024 (131-259)||(37299-37427)
[»] scaffold0204 (1 HSPs)
scaffold0204 (131-260)||(30371-30500)
[»] scaffold0146 (1 HSPs)
scaffold0146 (215-270)||(15883-15938)


Alignment Details
Target: chr7 (Bit Score: 245; Significance: 1e-136; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 17 - 273
Target Start/End: Original strand, 1546268 - 1546524
Alignment:
Q  17 atatccctagagaatgtaagagtgaatcgtatacttcgtctttgaatttataattatcagtcaaaatcgtcttcaaattttgcgaaatatcaattgcgtc 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  1546268 atatccctagagaatgtaagagtgaatcgtatacttcgtctttgaatttataagtatcagtcaaaatcgtcttcaaattttgcgaaatatcaattgcgtc 1546367  T
Q  117 cttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgt 216  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1546368 cttgaatttctctcacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgt 1546467  T
Q  217 gtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaacacaaaaaattcag 273  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  1546468 gtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaacgcaaaaaattcag 1546524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 92 - 259
Target Start/End: Original strand, 45359392 - 45359559
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||| |||  ||||||||||||  |  ||||||||||||||||||||||| |||||||| |||||||||| || |||  || |  | |    
T  45359392 aattttgcgaaatatctatttagtccttgaattttacagacgtccatcaaaatggtccctccatccaaaagctccgttagtggtgatgacgtgtcctctt 45359491  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||| ||||||||| | || |||| ||||||||| ||||||||||||||||||||| ||||||||||    
T  45359492 gcatgctgtgttgtcatgtacacgtttcaaaaaggcagtcacgtgtacaaggactaatttgatggaaa 45359559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 92 - 259
Target Start/End: Complemental strand, 39859297 - 39859130
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||| |||  ||||||||||||  |  |||||| ||||||||||||||||||||||||| |||||||||| || |||  || |  | |    
T  39859297 aattttgcgaaatatctatttagtccttgaattttacagacgtccgtcaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtgtcctctt 39859198  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||| ||||||||| | || ||||||||| |||  || |||||||||||||||||| ||||||||||    
T  39859197 gcatgctgtgttgtcatgtacacgtgtcaacaagacagccacgtgtacaaggactaatttgatggaaa 39859130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 72 - 238
Target Start/End: Complemental strand, 37796269 - 37796103
Alignment:
Q  72 atcagtcaaaatcgtcttcaaattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttag 171  Q
    ||||| |||| ||||| ||||||||||||||||||| |||  |||| |||||||  |  |||||||||||||| ||||||||||||| ||| ||||||||    
T  37796269 atcagccaaattcgtcctcaaattttgcgaaatatctatttagtccctgaattttacggacgtccatcaaaatagtccctccgtccataagctccgttag 37796170  T
Q  172 tgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgta 238  Q
     ||||||||  || |  | |||||||||||||||||| || ||||||||| |||| || ||||||||    
T  37796169 cgatgctgatgtgtcctcttgcatgttgtgttgtcttctacacgtgtcaagaaggcagccacgtgta 37796103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 92 - 259
Target Start/End: Original strand, 6602391 - 6602558
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||| |||  |||| |||||||  |  |||||||||||||||||||||||||||||||| |||||||||| || |||  || |    |    
T  6602391 aattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgacatgtcctttt 6602490  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||| ||||||||| | || |||||||||  ||| || |||||||||||||||||| ||||||||||    
T  6602491 gcatgctgtgttgtcatgtacacgtgtcaaccaggcagccacgtgtacaaggactaatttgatggaaa 6602558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 92 - 259
Target Start/End: Complemental strand, 24228477 - 24228310
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||| |||  |||  |||||||  |  ||||||||||||||||||||| |||||||||| ||| |||||| || |||  || |  | |    
T  24228477 aattttgcgaaatatctatttagtctctgaattttacagacgtccatcaaaatggtcccttcgtccaaaagctccattagtggtgatgatgtgtcctctt 24228378  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||||||||||||| |||| ||||||||| |||| || ||||||||| | |||||||||||||||||    
T  24228377 gcatgttgtgttgtcatatacacgtgtcaacaaggcagccacgtgtacgaagactaaattgatggaaa 24228310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 92 - 257
Target Start/End: Original strand, 23953861 - 23954026
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||| ||||||||||||| |  |||| ||||||| ||  ||||| ||||||| |||||||||||||||  | ||||||||  |||||||  || | || |    
T  23953861 aattatgcgaaatatcaacttagtccgtgaatttgtcagacgtcaatcaaaaaggtccctccgtccaagtgctccgttagccatgctgatatgtcgccat 23953960  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatgga 257  Q
    ||||||||||||||||| || ||||| ||||||||||| ||||||| | |||||||| ||||||||    
T  23953961 gcatgttgtgttgtcttgtacacgtggcaaaaaggaagccacgtgttccaggactaatttgatgga 23954026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 114 - 270
Target Start/End: Original strand, 6056844 - 6057000
Alignment:
Q  114 gtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatata 213  Q
    ||||||||||||  |  |||||||||||||| |||| |||||||||| | |||||||||| |||||||||| |  |||||||||  |||||| || || |    
T  6056844 gtccttgaatttaacaaacgtccatcaaaatagtccttccgtccaaatgctccgttagtgctgctgagctgtcgtcctgcatgtcctgttgtattgtaca 6056943  T
Q  214 cgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaacacaaaaaatt 270  Q
    |||||| | ||||||| ||||| ||||||||| || ||||||||||| | |||||||    
T  6056944 cgtgtctacaaggaagccacgtctacaaggaccaatttgatggaaacgctaaaaatt 6057000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 131 - 255
Target Start/End: Complemental strand, 35693399 - 35693275
Alignment:
Q  131 acgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagt 230  Q
    ||||||||||||||||||||||| |||||||| || ||||||| || |||  || |  | ||||||| |||||||||| || ||||||||| |||| ||     
T  35693399 acgtccatcaaaatggtccctccatccaaaagttctgttagtggtgatgatgtgtcctcttgcatgtagtgttgtcttgtacacgtgtcaacaaggcagc 35693300  T
Q  231 cacgtgtacaaggactaaattgatg 255  Q
    |||||||||||||||||||||||||    
T  35693299 cacgtgtacaaggactaaattgatg 35693275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 92 - 259
Target Start/End: Complemental strand, 34776983 - 34776816
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||| |||  |||| |||||||  |  |||||||||||||||||||||||||||||||  ||||||||||||| |||  || |  | |    
T  34776983 aattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaaactccgttagtgatgatgacgtgtcctctt 34776884  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||||||||||||| | || ||||| ||| |||| |  ||| |||||||| ||||| ||||||||||    
T  34776883 gcatgttgtgttgtcatgtacacgtgccaacaaggcaaccacatgtacaagaactaatttgatggaaa 34776816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 92 - 246
Target Start/End: Complemental strand, 33038865 - 33038711
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||| ||||||||||||| |  |||| ||||||| ||  ||||||||||||| |||||||||||||||  | || |||||  ||| ||| ||| |  |||    
T  33038865 aattatgcgaaatatcaacttagtccctgaatttttcagacgtccatcaaaaaggtccctccgtccaagtgctctgttaggcatgttgatctgtcgtcct 33038766  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggact 246  Q
    |||||||||||||||||||| ||||||||| ||||||| || |||| ||||||||    
T  33038765 gcatgttgtgttgtcttatacacgtgtcaagaaggaagccatgtgttcaaggact 33038711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 92 - 254
Target Start/End: Original strand, 40784402 - 40784564
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||| ||||||||||||| |  ||| |||||||| ||  || |||||||||| |||||||||||||||| |  | |||| | ||||||| ||| |  |||    
T  40784402 aattatgcgaaatatcaacttagtctttgaatttgtcagacatccatcaaaaaggtccctccgtccaaatgcgctgttaatcatgctgatctgtcgtcct 40784501  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgat 254  Q
    |||||||||||||||||||| ||||| ||| ||||||| ||| ||| |||||||||| |||||    
T  40784502 gcatgttgtgttgtcttatacacgtggcaagaaggaagccacatgttcaaggactaatttgat 40784564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 259
Target Start/End: Original strand, 13168218 - 13168346
Alignment:
Q  131 acgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagt 230  Q
    ||||||||||||||||||| |||||||||||| |||||||||| || |||  || |  | |||||| ||||||||| | || ||||||||| |||  ||     
T  13168218 acgtccatcaaaatggtccatccgtccaaaagctccgttagtggtgatgacgtgtcatcttgcatgctgtgttgtcatgtacacgtgtcaacaagacaga 13168317  T
Q  231 cacgtgtacaaggactaaattgatggaaa 259  Q
    |||||||||||||||||| ||||||||||    
T  13168318 cacgtgtacaaggactaatttgatggaaa 13168346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 92 - 259
Target Start/End: Complemental strand, 30940493 - 30940326
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||| ||||||||| |||  |||| |||||||  |  |||| ||||||||||||| ||||||||||||| |||||||||| || |||  || |    |    
T  30940493 aattttacgaaatatctatttagtccctgaattttacaaacgttcatcaaaatggtctctccgtccaaaagctccgttagtggtgatgatgtgtcctatt 30940394  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||| ||||||||| | || || |||||| |||| || |||||||||||||||||||||||||||||    
T  30940393 gcatgctgtgttgtcctgtacacatgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 30940326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 92 - 254
Target Start/End: Complemental strand, 46996770 - 46996608
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||| ||||||||||||| |  |||  ||||||| ||  ||||||||||||| |||||||||||||||  | |||||||| |||||||| ||| | || |    
T  46996770 aattatgcgaaatatcaacttagtcactgaatttgtcagacgtccatcaaaaaggtccctccgtccaagtgctccgttagcgatgctgatctgtcgcctt 46996671  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgat 254  Q
    ||||| ||||||||||| ||  |||| ||| ||||||| ||||||| ||||||| || |||||    
T  46996670 gcatgctgtgttgtcttgtacgcgtggcaagaaggaagccacgtgttcaaggacgaatttgat 46996608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 92 - 257
Target Start/End: Original strand, 2167535 - 2167700
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||| ||||||||||||| |  |||| ||||||| ||  ||| ||||||||| |||||||||||||||  | ||| ||||  |||||||  || | ||||    
T  2167535 aattatgcgaaatatcaacttagtccctgaatttgtcagacgcccatcaaaaaggtccctccgtccaagtgctccattagccatgctgacgtgtcaccct 2167634  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatgga 257  Q
    ||||| ||||||||||| || ||||| ||||||| ||| |||| || |||||||||| ||||||||    
T  2167635 gcatgatgtgttgtcttgtacacgtggcaaaaagaaagccacgcgttcaaggactaatttgatgga 2167700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 131 - 259
Target Start/End: Complemental strand, 47386238 - 47386110
Alignment:
Q  131 acgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagt 230  Q
    ||||||||||||||||||  |||||||||||| |||||||||| || |||  ||    | |||||| ||||||||| | || | ||||||| |||| ||     
T  47386238 acgtccatcaaaatggtcattccgtccaaaagctccgttagtggtgatgatgtgttctcttgcatgatgtgttgtcctgtacaagtgtcaacaaggcagc 47386139  T
Q  231 cacgtgtacaaggactaaattgatggaaa 259  Q
    |||||||||||||||||||||||||||||    
T  47386138 cacgtgtacaaggactaaattgatggaaa 47386110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 259
Target Start/End: Complemental strand, 23906289 - 23906162
Alignment:
Q  132 cgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtc 231  Q
    ||||||||||||||||||||||||||||||| ||||||| ||  | |||  || |  | |||||| ||||||||| | || ||||||||| |||| |  |    
T  23906289 cgtccatcaaaatggtccctccgtccaaaagctccgttaatggcgatgacgtgtcctcttgcatgctgtgttgtcctgtacacgtgtcaacaaggcaaac 23906190  T
Q  232 acgtgtacaaggactaaattgatggaaa 259  Q
    || |||||||||||||||||||||||||    
T  23906189 acttgtacaaggactaaattgatggaaa 23906162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 259
Target Start/End: Complemental strand, 27666133 - 27665966
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||||| |  |||| |||||||  |  ||||||||||||   |||||||||||||||||| |||||| |  || |||  ||||| | |    
T  27666133 aattttgcgaaatatcaaattagtccctgaattttacaaacgtccatcaaatccgtccctccgtccaaaaggcccgttaatagtgatgatgtggcttctt 27666034  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||| | ||||||| | || ||||||||  |||  || |||||||||||||||||||||||||||||    
T  27666033 gcatgctttgttgtcctgtacacgtgtcagcaagtcagccacgtgtacaaggactaaattgatggaaa 27665966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 259
Target Start/End: Complemental strand, 29996582 - 29996415
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||||| |   ||| |||||||  |  |||||||||||| | |||||||| |||||||||||||||| |  || |||  ||||| | |    
T  29996582 aattttgcgaaatatcaaattaatccctgaattttacagacgtccatcaaattcgtccctccatccaaaaggtccgttaatagtgatgacgtggcttctt 29996483  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
     |||||| ||||||| | || ||||||||  ||   ||||||||||||||||||||||||||||||||    
T  29996482 acatgttttgttgtcatgtacacgtgtcagcaaatcagtcacgtgtacaaggactaaattgatggaaa 29996415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 259
Target Start/End: Complemental strand, 38474211 - 38474044
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||| |||  ||||||||||||  |  ||| | ||||||||||||| |||||||||||| |||||||||| || |||  || |  | |    
T  38474211 aattttgcgaaatatctatttagtccttgaattttacagacgcctatcaaaatggtccatccgtccaaaagctccgttagtggtgatgatgtgtcctctt 38474112  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    | ||| ||||||||| | || ||||||||| |||  || ||||||| |||||||| ||||||||||||    
T  38474111 gtatgctgtgttgtcctgtacacgtgtcaacaagacagccacgtgtgcaaggactgaattgatggaaa 38474044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 146 - 259
Target Start/End: Complemental strand, 46439544 - 46439431
Alignment:
Q  146 gtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggac 245  Q
    ||||||||||||||||| |||||||||| ||  ||  || |  | |||||||||||||||||| || ||||||||| | || || |||||||||| ||||    
T  46439544 gtccctccgtccaaaagctccgttagtggtgacgatgtgtcctcttgcatgttgtgttgtcttgtacacgtgtcaacagggcagccacgtgtacatggac 46439445  T
Q  246 taaattgatggaaa 259  Q
    ||||||||||||||    
T  46439444 taaattgatggaaa 46439431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 90 - 259
Target Start/End: Complemental strand, 48852417 - 48852248
Alignment:
Q  90 caaattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctcc 189  Q
    |||||||||| ||||||| |||   |||||||||||  |  |||||||||||||||||| ||| ||||||||| || ||||||| || |||  || |  |    
T  48852417 caaattttgcaaaatatctatttaatccttgaattttacagacgtccatcaaaatggtctctcggtccaaaagctctgttagtggtgatgatgtgtcctc 48852318  T
Q  190 ctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
     | |||| ||||||||||| || | ||||||| |||  ||||||||||||||| ||||| ||||||||||    
T  48852317 ttacatgatgtgttgtcttgtacatgtgtcaacaagacagtcacgtgtacaagaactaatttgatggaaa 48852248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 131 - 270
Target Start/End: Original strand, 31913564 - 31913703
Alignment:
Q  131 acgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagt 230  Q
    |||||||||||||| || | |||||||||| | |||||||||| ||||||| || |  ||||||||   |||||||||  | ||||||| | |||||||     
T  31913564 acgtccatcaaaatagttcttccgtccaaatgctccgttagtgttgctgagttgtcgtcctgcatggcttgttgtcttgcacacgtgtctacaaggaagc 31913663  T
Q  231 cacgtgtacaaggactaaattgatggaaacacaaaaaatt 270  Q
    ||||||||||||||| || ||||| ||||| || ||||||    
T  31913664 cacgtgtacaaggaccaatttgattgaaacgcacaaaatt 31913703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 193 - 260
Target Start/End: Original strand, 48704337 - 48704404
Alignment:
Q  193 catgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaac 260  Q
    |||||||||||||| | || ||||||||| ||||||||||||||||||||||| || |||||||||||    
T  48704337 catgttgtgttgtcgtgtacacgtgtcaacaaggaagtcacgtgtacaaggaccaatttgatggaaac 48704404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 111
Target Start/End: Complemental strand, 1547754 - 1547679
Alignment:
Q  36 gagtgaatcgtatacttcgtctttgaatttataattatcagtcaaaatcgtcttcaaattttgcgaaatatcaatt 111  Q
    ||||||||| |  ||||||||  |||||||  || ||||||||||||||||||||||||||||| |||||||||||    
T  1547754 gagtgaatcatcaacttcgtccatgaatttgcaagtatcagtcaaaatcgtcttcaaattttgcaaaatatcaatt 1547679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 270
Target Start/End: Original strand, 23962399 - 23962538
Alignment:
Q  131 acgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagt 230  Q
    ||||| |||||||| |||| |||||| ||| | |||||||||| ||||||| || || ||||||||   ||||||||| || ||||| | | |||||||     
T  23962399 acgtcaatcaaaatagtccttccgtcaaaatgctccgttagtgctgctgagttgtcttcctgcatggcttgttgtcttgtacacgtgcctacaaggaagc 23962498  T
Q  231 cacgtgtacaaggactaaattgatggaaacacaaaaaatt 270  Q
    ||| ||||||||||| || ||||| ||||| || ||||||    
T  23962499 cacatgtacaaggaccaatttgattgaaacgcacaaaatt 23962538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 258
Target Start/End: Original strand, 27955465 - 27955592
Alignment:
Q  131 acgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagt 230  Q
    ||||||||||||  |||||||||||||||  | ||||||||| |||||||  || |   ||||||||||||||||||| || || || ||| |||||||     
T  27955465 acgtccatcaaagaggtccctccgtccaagtgctccgttagtcatgctgatgtgtcgtgctgcatgttgtgttgtcttgtacacttggcaacaaggaagc 27955564  T
Q  231 cacgtgtacaaggactaaattgatggaa 258  Q
    || |||| ||||||| || |||||||||    
T  27955565 catgtgttcaaggaccaatttgatggaa 27955592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 136 - 270
Target Start/End: Complemental strand, 46867958 - 46867825
Alignment:
Q  136 catcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgt 235  Q
    ||||||||| || | |||||||||| | |||||||||| |||||||||| |  ||||||||   ||||||||| || |||||||   ||||||| ||| |    
T  46867958 catcaaaatagttcttccgtccaaatgctccgttagtgctgctgagctgtcgtcctgcatgca-tgttgtcttgtacacgtgtcttcaaggaagccacat 46867860  T
Q  236 gtacaaggactaaattgatggaaacacaaaaaatt 270  Q
    |||||||||| || ||||||||||| | |||||||    
T  46867859 gtacaaggaccaatttgatggaaacgctaaaaatt 46867825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 259
Target Start/End: Original strand, 56386 - 56552
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||||| |  |||| |||||||  |  |||||||||||     ||||||||||||||| ||| ||||||  || |||  ||||| | |    
T  56386 aattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaattcactccctccgtccaaaatgtctgttagtagtgatgatgtggcttctt 56485  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||||||||||||||| || ||||||||  |||  || |||||||| |  |||||||||||||||||    
T  56486 gcatgttgtgttgtcttgtacacgtgtcagcaagtcagccacgtgta-agagactaaattgatggaaa 56552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 258
Target Start/End: Original strand, 2492493 - 2492548
Alignment:
Q  203 tgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaa 258  Q
    |||||| || ||||| ||||||||||||||||||| |||||||||| |||||||||    
T  2492493 tgtcttgtacacgtggcaaaaaggaagtcacgtgttcaaggactaatttgatggaa 2492548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 173
Target Start/End: Complemental strand, 37115555 - 37115513
Alignment:
Q  131 acgtccatcaaaatggtccctccgtccaaaaggtccgttagtg 173  Q
    |||||||||||||| ||||||||||||||||| ||||||||||    
T  37115555 acgtccatcaaaatagtccctccgtccaaaagctccgttagtg 37115513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 198 - 259
Target Start/End: Complemental strand, 4322555 - 4322494
Alignment:
Q  198 tgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||||| ||| || |||||  |||||| |||||||||||||| ||||||||||||||||||    
T  4322555 tgtgttggcttgtacacgtgggaaaaagaaagtcacgtgtacagggactaaattgatggaaa 4322494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 257
Target Start/End: Original strand, 38613615 - 38613684
Alignment:
Q  188 ccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatgga 257  Q
    ||||||||| ||||||||||| || |||||  |||||| ||| ||||||| |||||||||| ||||||||    
T  38613615 ccctgcatggtgtgttgtcttgtacacgtgggaaaaagaaagccacgtgttcaaggactaacttgatgga 38613684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 270
Target Start/End: Original strand, 17199070 - 17199150
Alignment:
Q  190 ctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaacacaaaaaatt 270  Q
    ||||||||  ||||||||| || ||||||| | ||| ||||||  ||||||||||| || ||||||||||||| |||||||    
T  17199070 ctgcatgtcatgttgtcttgtacacgtgtctacaagaaagtcatatgtacaaggaccaatttgatggaaacactaaaaatt 17199150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 34691133 - 34691197
Alignment:
Q  195 tgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    |||||||||| ||| || ||||| ||| ||||||| |||||||||| ||| ||||||||||||||    
T  34691133 tgttgtgttggcttgtacacgtggcaacaaggaagccacgtgtacagggattaaattgatggaaa 34691197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 45463808 - 45463872
Alignment:
Q  195 tgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    |||||||||| ||| || |||||  |||||| ||| |||||||||| ||||||||||||||||||    
T  45463808 tgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 45463872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 72 - 180
Target Start/End: Original strand, 13018069 - 13018179
Alignment:
Q  72 atcagtcaaaatcgtcttcaaattttgcgaaatat--caattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgtt 169  Q
    ||||| |||| ||||| |||||||| |||||||||  | ||| | ||  |||||||  | ||||||||||||||||||||||||||||||    ||||||    
T  13018069 atcagccaaattcgtcctcaaatttagcgaaatatatctatttcatctctgaatttaacatacgtccatcaaaatggtccctccgtccaatcactccgtt 13018168  T
Q  170 agtgatgctga 180  Q
    ||||| |||||    
T  13018169 agtgaggctga 13018179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 45463748 - 45463807
Alignment:
Q  114 gtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtg 173  Q
    |||| ||||||| | | |||||||||||  | ||||||||||||||||||||||||||||    
T  45463748 gtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagtg 45463807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 100 - 247
Target Start/End: Complemental strand, 46812642 - 46812495
Alignment:
Q  100 gaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttg 199  Q
    ||||||||||||  |||| | ||||| ||  ||||||||||||| ||||  |||||||||  | || |||||  |||||||  || | ||||||||| ||    
T  46812642 gaaatatcaatttagtccctaaatttgtcagacgtccatcaaaaaggtcattccgtccaagtgctctgttagccatgctgatatgtcgccctgcatgctg 46812543  T
Q  200 tgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggacta 247  Q
    ||||||||| ||   ||| ||| ||||||| ||||||| |||||||||    
T  46812542 tgttgtcttgtacgtgtggcaagaaggaagccacgtgttcaaggacta 46812495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 254
Target Start/End: Complemental strand, 47341651 - 47341588
Alignment:
Q  191 tgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgat 254  Q
    |||||| ||||||||||| || ||||| ||| ||||||| ||||||| |||||||||| |||||    
T  47341651 tgcatgctgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 47341588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 135; Significance: 3e-70; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 79 - 273
Target Start/End: Original strand, 17946137 - 17946331
Alignment:
Q  79 aaaatcgtcttcaaattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgct 178  Q
    ||||||||| | ||||||||| |||||||||||  |||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  17946137 aaaatcgtccttaaattttgcaaaatatcaattttgtccctgaatttctctcatgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgct 17946236  T
Q  179 gagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaacacaaaaaattcag 273  Q
     ||||||||||||| ||||||||||||| | || || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  17946237 aagctggctccctgtatgttgtgttgtcatgtacacatgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaacgcaaaaaattcag 17946331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 33 - 273
Target Start/End: Original strand, 7744040 - 7744280
Alignment:
Q  33 taagagtgaatcgtatacttcgtctttgaatttataattatcagtcaaaatcgtcttcaaattttgcgaaatatcaattgcgtccttgaatttctcttac 132  Q
    |||||||||||| |  ||||||||  |||||||  ||  || || |||||||||||  ||||||||||||||||||||| ||||| ||||||||||| |     
T  7744040 taagagtgaatcatcaacttcgtccctgaatttgcaagcattaggcaaaatcgtctcaaaattttgcgaaatatcaatttcgtccctgaatttctctcat 7744139  T
Q  133 gtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtca 232  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| | |||| ||| ||||||||||||| | || || |||||||||||||| ||    
T  7744140 gtccatcaaaatggtccctccatccaaaaggtccgttagtgatgctgagttagctctctgtatgttgtgttgtcatgtacacatgtcaaaaaggaagcca 7744239  T
Q  233 cgtgtacaaggactaaattgatggaaacacaaaaaattcag 273  Q
    ||||||||| ||||||||||||| |||| ||||||||||||    
T  7744240 cgtgtacaatgactaaattgatgaaaacgcaaaaaattcag 7744280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 94 - 259
Target Start/End: Complemental strand, 42519291 - 42519126
Alignment:
Q  94 ttttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgc 193  Q
    |||||| ||||||| |||  |||| |||||||  |  ||||||||||||||||||||||| |||||||| |||||||||| || |||  || |  | |||    
T  42519291 ttttgcaaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccatccaaaagctccgttagtggtgatgatgtgtcctcttgc 42519192  T
Q  194 atgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||| ||||||||| | || ||||||||| |||| ||||||||||||||||||||||||||||||||    
T  42519191 atgctgtgttgtcctgtacacgtgtcaacaaggcagtcacgtgtacaaggactaaattgatggaaa 42519126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 92 - 259
Target Start/End: Complemental strand, 14389172 - 14389005
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||| |||  |||| |||||||  |  | |||||||||||||||||||||||||||||| | |||||||  || |||  || |  | |    
T  14389172 aattttgcgaaatatctatttagtccctgaattttccaaatgtccatcaaaatggtccctccgtccaaaagtttcgttagtagtgatgatgtgtcctctt 14389073  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||||||||||||||| || ||||||||| |||| || |||||||||||||||||| ||||||||||    
T  14389072 gcatgttgtgttgtcttgtacacgtgtcaataaggcagccacgtgtacaaggactaacttgatggaaa 14389005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 92 - 259
Target Start/End: Complemental strand, 19908334 - 19908167
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||| |||  ||||||||||||  |  |||||| ||||||||||||||||||||||||| |||||||||| || |||  || |  | |    
T  19908334 aattttgcgaaatatctatttagtccttgaattttacagacgtccgtcaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtgtcctctt 19908235  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||| ||||||||| | || ||||||||| |||  || |||||||||||||||||| ||||||||||    
T  19908234 gcatgctgtgttgtcatgtacacgtgtcaacaagacagccacgtgtacaaggactaatttgatggaaa 19908167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 92 - 259
Target Start/End: Complemental strand, 44709833 - 44709666
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||| | |||  |||| |||||||  |  |||||||||||||||||||||||||||||||| | |||||||| || |||  || |  | |    
T  44709833 aattttgcgaaataactatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagcttcgttagtggtgatgatatgtcctctt 44709734  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||||||||||||||| || ||||||||| |||  |  |||||||||||||||||||||||||||||    
T  44709733 gcatgttgtgttgtcttgtacacgtgtcaacaagacatccacgtgtacaaggactaaattgatggaaa 44709666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 51 - 259
Target Start/End: Original strand, 2766949 - 2767157
Alignment:
Q  51 ttcgtctttgaatttataattatcagtcaaaatcgtcttcaaattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccc 150  Q
    |||||| |||||||| |||  ||| |||||| ||||| |  |||||||||||||||| |||  |||| |||||||  |  ||||| ||||||||||||||    
T  2766949 ttcgtccttgaatttttaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtctatcaaaatggtccc 2767048  T
Q  151 tccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaat 250  Q
    || ||||||||| |||||||||| || |||  || |  | || ||||||||||||| | || |||||| || |||| ||||||||||||| ||| |||||    
T  2767049 tctgtccaaaagctccgttagtggtgatgatgtgtcctcttgtatgttgtgttgtcctgtacacgtgttaacaaggcagtcacgtgtacatggattaaat 2767148  T
Q  251 tgatggaaa 259  Q
    |||||||||    
T  2767149 tgatggaaa 2767157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 51 - 255
Target Start/End: Original strand, 16763091 - 16763294
Alignment:
Q  51 ttcgtctttgaatttataattatcagtcaaaatcgtcttcaaattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccc 150  Q
    |||||| |||||||| |||  ||| |||||| |||||    |||||||||||||||| |||  |||| |||||||  |  ||||||||||||||||||||    
T  16763091 ttcgtccttgaatttttaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccc 16763190  T
Q  151 tccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaat 250  Q
    |||||||||||  || |||||||  | |||  || | || |||||||||| ||||||| || ||||||||| |||| || ||||||||||||||||||||    
T  16763191 tccgtccaaaatctctgttagtggcgatgacgtgtc-ccttgcatgttgttttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaat 16763289  T
Q  251 tgatg 255  Q
    |||||    
T  16763290 tgatg 16763294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 51 - 259
Target Start/End: Original strand, 40560238 - 40560446
Alignment:
Q  51 ttcgtctttgaatttataattatcagtcaaaatcgtcttcaaattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccc 150  Q
    |||||||||||||||  ||  ||||| |||| |||||    |||||||||||||||| |||  |||| |||||||  |  |||||||||||||| |||||    
T  40560238 ttcgtctttgaattttaaaaaatcagccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatagtccc 40560337  T
Q  151 tccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaat 250  Q
    |||||||||||| || ||||||| || |||  || |  | |||||| ||||||||| | ||  |||||||| |||| || ||||||||||||||||||||    
T  40560338 tccgtccaaaagttctgttagtggtgatgatgtgtcctcttgcatgctgtgttgtcatgtacgcgtgtcaacaaggcagccacgtgtacaaggactaaat 40560437  T
Q  251 tgatggaaa 259  Q
    |||||||||    
T  40560438 tgatggaaa 40560446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 131 - 259
Target Start/End: Original strand, 17696301 - 17696429
Alignment:
Q  131 acgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagt 230  Q
    ||||| |||||||||||| ||||||||||||| |||||||||| || |||  || |  | |||||||||||||||| | || ||||||||| |||| ||     
T  17696301 acgtcaatcaaaatggtcactccgtccaaaagctccgttagtggtgatgatgtgtcatcttgcatgttgtgttgtcctgtacacgtgtcaacaaggcagc 17696400  T
Q  231 cacgtgtacaaggactaaattgatggaaa 259  Q
    || ||||||||||||||||||||||||||    
T  17696401 catgtgtacaaggactaaattgatggaaa 17696429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 92 - 259
Target Start/End: Complemental strand, 39664836 - 39664669
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||| ||||||||| |||  |||| |||||||  |  |||||||||||||||||||||||||||||||| |||||||||| || |||  || |  | |    
T  39664836 aattttacgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgtgtcctctt 39664737  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||  | ||||||||| | || ||||||||| |||| || |||||||||||||||||| ||||||||||    
T  39664736 gctagctgtgttgtcatgtacacgtgtcaacaaggcagccacgtgtacaaggactaatttgatggaaa 39664669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 92 - 248
Target Start/End: Original strand, 37417329 - 37417485
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||| ||||||||||||| |  |||| ||||||| ||  ||||||||||||| ||||||| |||||||  | ||||||||  ||||||| |||   ||||    
T  37417329 aattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtcccttcgtccaagtgctccgttagccatgctgatctgttgccct 37417428  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaa 248  Q
    ||||| ||||||||||| || ||||| ||| ||||||| ||||||| ||||||||||    
T  37417429 gcatgctgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaa 37417485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 131 - 237
Target Start/End: Original strand, 42879450 - 42879556
Alignment:
Q  131 acgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagt 230  Q
    ||||||||||||| |||||||||||||||  | ||||||||| |||||||  || | ||||||||| ||||||||||| || ||||| ||| ||||||||    
T  42879450 acgtccatcaaaaaggtccctccgtccaagtgttccgttagtcatgctgatatgtcgccctgcatgctgtgttgtcttgtacacgtgacaagaaggaagt 42879549  T
Q  231 cacgtgt 237  Q
    |||||||    
T  42879550 cacgtgt 42879556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 92 - 173
Target Start/End: Complemental strand, 16377285 - 16377204
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtg 173  Q
    |||||||| ||||||| |||  ||||||||||||  | ||||||||||||||||||||||||||||||||| ||||||||||    
T  16377285 aattttgcaaaatatctatttagtccttgaattttacatacgtccatcaaaatggtccctccgtccaaaagctccgttagtg 16377204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 259
Target Start/End: Original strand, 39455225 - 39455392
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||| ||||||| |||  |||| |||||||  |  |||||||||||||||||| |||||| |||||| ||||||||||  | |||  || |  | |    
T  39455225 aattttgcaaaatatctatttagtccatgaattttacagacgtccatcaaaatggtctctccgttcaaaagctccgttagtggcgatgatgtgccctctt 39455324  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||||||||||||| | || ||||||||| |||| |  | |||| ||||||||||||||||||||||    
T  39455325 gcatgttgtgttgtcatgtacacgtgtcaacaaggcaccctcgtgcacaaggactaaattgatggaaa 39455392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 191 - 270
Target Start/End: Original strand, 40097703 - 40097782
Alignment:
Q  191 tgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaacacaaaaaatt 270  Q
    ||||||| ||||||||||||||||||||||| ||||||| |||||||||||| ||||| |||||| |||| | |||||||    
T  40097703 tgcatgtcgtgttgtcttatatacgtgtcaacaaggaagccacgtgtacaagaactaatttgatgaaaacgctaaaaatt 40097782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 92 - 254
Target Start/End: Original strand, 15432384 - 15432546
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||| |||||||||||||||  |||  ||||||| ||  ||||||||||||| ||| | | |||||||  | ||  ||||| |||||||  || | ||||    
T  15432384 aattatgcgaaatatcaatttagtctctgaatttgtcagacgtccatcaaaaaggttcattcgtccaagtgctctattagtcatgctgacatgtcgccct 15432483  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgat 254  Q
    ||||||||||||||||| || ||||| ||| |||||||||| |||| |||||||||| |||||    
T  15432484 gcatgttgtgttgtcttgtacacgtggcaagaaggaagtcatgtgttcaaggactaatttgat 15432546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 191 - 259
Target Start/End: Complemental strand, 10716872 - 10716804
Alignment:
Q  191 tgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    |||||||||||||||||| || ||||||||| ||||||| ||||||||||||||| || ||||||||||    
T  10716872 tgcatgttgtgttgtcttgtacacgtgtcaacaaggaagccacgtgtacaaggaccaatttgatggaaa 10716804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 131 - 270
Target Start/End: Complemental strand, 862341 - 862202
Alignment:
Q  131 acgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagt 230  Q
    ||||| |||||||| |||| |||||||||| | |||||||||| || |||| || || ||||||||   ||||||||| || ||||||| | |||||||     
T  862341 acgtcaatcaaaatagtccttccgtccaaatgctccgttagtgctgttgagttgtcttcctgcatggcttgttgtcttgtacacgtgtctacaaggaagc 862242  T
Q  231 cacgtgtacaaggactaaattgatggaaacacaaaaaatt 270  Q
    || |||||||||||| || ||||| ||||| || ||||||    
T  862241 catgtgtacaaggaccaatttgattgaaacgcacaaaatt 862202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 92 - 255
Target Start/End: Original strand, 6797563 - 6797726
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||| |||  |||| | |||||  |  ||||| ||||||||||| |||||||||||||| || ||||  | || |||  |  |  | |    
T  6797563 aattttgcgaaatatctatttagtcccttaattttacagacgtctatcaaaatggttcctccgtccaaaagctctgttacgggtgatgatgtatcctctt 6797662  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatg 255  Q
    ||||| ||||||||||| || ||||||||| |||| || |||||||||||||||||||||||||    
T  6797663 gcatgatgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatg 6797726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 254
Target Start/End: Original strand, 25619716 - 25619878
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||| ||| ||||||||| |  |||| ||||||| || || ||||||||||| ||||||||| |||||  | ||||||||  ||| ||| ||| | | ||    
T  25619716 aattatgcaaaatatcaacttagtccctgaatttgtcatatgtccatcaaaaaggtccctccatccaagtgctccgttagccatgttgatctgtcgctct 25619815  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgat 254  Q
    |||||||| ||||||||||| ||||| ||| || |||| ||| ||| |||||||||| |||||    
T  25619816 gcatgttgcgttgtcttatacacgtggcaagaaagaagccacatgttcaaggactaatttgat 25619878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 269
Target Start/End: Complemental strand, 62849 - 62710
Alignment:
Q  131 acgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaagg-aag 229  Q
    |||||||||||||| |||| |||||||||| | |||| ||||| ||||||| || |  | |||||||  ||||| ||| || ||||||||| |||| |||    
T  62849 acgtccatcaaaatagtccttccgtccaaatgctccgctagtgctgctgagttgtcgtcatgcatgtcatgttgccttgtacacgtgtcaacaaggaaag 62750  T
Q  230 tcacgtgtacaaggactaaattgatggaaacacaaaaaat 269  Q
     ||||||||||| ||| || ||||||||||| | ||||||    
T  62749 ccacgtgtacaatgaccaatttgatggaaacgctaaaaat 62710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 260
Target Start/End: Complemental strand, 11315324 - 11315257
Alignment:
Q  193 catgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaac 260  Q
    |||||||||||||||| || ||||||||| ||||||| ||| ||||||||||| || |||||||||||    
T  11315324 catgttgtgttgtcttgtacacgtgtcaacaaggaagccacatgtacaaggaccaatttgatggaaac 11315257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 51 - 125
Target Start/End: Complemental strand, 7745348 - 7745274
Alignment:
Q  51 ttcgtctttgaatttataattatcagtcaaaatcgtcttcaaattttgcgaaatatcaattgcgtccttgaattt 125  Q
    |||||| |||||||| |||  ||||| ||||||||||  |||||||||||||||||||||| ||| |||||||||    
T  7745348 ttcgtcattgaatttgtaagcatcagccaaaatcgtccccaaattttgcgaaatatcaatttcgttcttgaattt 7745274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 35 - 125
Target Start/End: Complemental strand, 17949019 - 17948929
Alignment:
Q  35 agagtgaatcgtatacttcgtctttgaatttataattatcagtcaaaatcgtcttcaaattttgcgaaatatcaattgcgtccttgaattt 125  Q
    |||||||||| |  ||||||||  |||||||  ||  ||||| ||||||||||  |||||||||||||||||||||| |||||||||||||    
T  17949019 agagtgaatcatcaacttcgtccatgaatttgcaagcatcagccaaaatcgtccccaaattttgcgaaatatcaatttcgtccttgaattt 17948929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 92 - 254
Target Start/End: Complemental strand, 29909728 - 29909566
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||| |||||||||||||||  |||| | ||||| ||  ||||||||||||| |||||||||||||||  | || |||||  ||| ||| ||| | |  |    
T  29909728 aattatgcgaaatatcaatttagtcccttaatttgtcagacgtccatcaaaaaggtccctccgtccaagtgctctgttagccatgttgatctgtcgcgtt 29909629  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgat 254  Q
    ||||||||||||||||| ||  |||| ||| ||||||| |||||||  | ||||||| |||||    
T  29909628 gcatgttgtgttgtcttgtacgcgtggcaagaaggaagccacgtgttaagggactaatttgat 29909566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 246
Target Start/End: Original strand, 42001761 - 42001819
Alignment:
Q  188 ccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggact 246  Q
    |||||||||||| |||||||| || ||||| ||| ||||||||||||||| ||||||||    
T  42001761 ccctgcatgttgagttgtcttgtacacgtgacaagaaggaagtcacgtgttcaaggact 42001819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 259
Target Start/End: Original strand, 38148659 - 38148698
Alignment:
Q  220 aaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    |||||||||| |||||||||| ||||||||||||||||||    
T  38148659 aaaaaggaagccacgtgtacagggactaaattgatggaaa 38148698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 254
Target Start/End: Complemental strand, 39465 - 39303
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||| ||||||||||||| |  |||| ||||||| ||  |||| |||||||| |||||| ||||||||  | ||||||||  |||||||  || |  | |    
T  39465 aattatgcgaaatatcaacttagtccctgaatttgtcagacgttcatcaaaaaggtccccccgtccaagtgttccgttagccatgctgatatgtcgtctt 39366  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgat 254  Q
    ||||| ||||||||||| ||  |||| ||| ||||||| ||||||| || |||| || |||||    
T  39365 gcatgctgtgttgtcttgtacgcgtggcaagaaggaagccacgtgttcagggacaaatttgat 39303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 259
Target Start/End: Complemental strand, 11022996 - 11022935
Alignment:
Q  198 tgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||||| ||| || |||||  |||||| ||| |||||||||| ||||||||||||||||||    
T  11022996 tgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 11022935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 160
Target Start/End: Complemental strand, 11315364 - 11315335
Alignment:
Q  131 acgtccatcaaaatggtccctccgtccaaa 160  Q
    ||||||||||||||||||||||||||||||    
T  11315364 acgtccatcaaaatggtccctccgtccaaa 11315335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 13999902 - 13999955
Alignment:
Q  131 acgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctg 184  Q
    |||||||||||||| |||| |||||||||| | ||| |||||| ||||||||||    
T  13999902 acgtccatcaaaatagtccttccgtccaaatgctccattagtgctgctgagctg 13999955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 259
Target Start/End: Original strand, 28246804 - 28246865
Alignment:
Q  198 tgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||||| ||| || |||||  |||||| ||| |||||||||| ||||||||||||||||||    
T  28246804 tgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 28246865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 134; Significance: 1e-69; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 36 - 273
Target Start/End: Original strand, 51121905 - 51122142
Alignment:
Q  36 gagtgaatcgtatacttcgtctttgaatttataattatcagtcaaaatcgtcttcaaattttgcgaaatatcaattgcgtccttgaatttctcttacgtc 135  Q
    ||||||||| |  |||||||| ||||||||  ||  ||||| ||| |||||   |||||||||| ||||||||||| ||||| ||||||||||| |||||    
T  51121905 gagtgaatcatcaacttcgtccttgaatttgcaagcatcagccaacatcgttcccaaattttgcaaaatatcaatttcgtccctgaatttctctcacgtc 51122004  T
Q  136 catcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgt 235  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| | || |||||||||||||||||||||||    
T  51122005 catcaaaatggtccctccgtccaaaaggtctgttagtgatgttgagctggctccctgcatgttgtgttgtcatgtacacgtgtcaaaaaggaagtcacgt 51122104  T
Q  236 gtacaaggactaaattgatggaaacacaaaaaattcag 273  Q
    ||||||||||||||||| || |||| ||||||| ||||    
T  51122105 gtacaaggactaaattgttgaaaacgcaaaaaaatcag 51122142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 92 - 259
Target Start/End: Complemental strand, 4856034 - 4855868
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||||| |  |||| |||||||  |  |||||||||||||||||||||||||||||||| ||||||| || || |||  || | || |    
T  4856034 aattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttaatggtgatgacgtgtc-cctt 4855936  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||||||||||||||| || ||||||||| |||| ||||||||||||||||||||||||||||||||    
T  4855935 gcatgttgtgttgtcttgtacacgtgtcaacaaggcagtcacgtgtacaaggactaaattgatggaaa 4855868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 92 - 259
Target Start/End: Complemental strand, 34778206 - 34778040
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||||| |  |||| |||||||  |  | |||||||||||||||||||||||||||||| |||||||||| || |||  || | || |    
T  34778206 aattttgcgaaatatcaaattagtccctgaattttacagatgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtgtc-cctt 34778108  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    |||| |||||||||||| || ||||||||| |||| || |||||||||||||||||||||||||||||    
T  34778107 gcatattgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 34778040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 51 - 259
Target Start/End: Complemental strand, 50556206 - 50555998
Alignment:
Q  51 ttcgtctttgaatttataattatcagtcaaaatcgtcttcaaattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccc 150  Q
    |||||||||||||||  ||  |||||||||| ||||||   |||||||||||||||| |||  |||| | |||||  |  ||||| ||||||||||||||    
T  50556206 ttcgtctttgaattttaaaaaatcagtcaaattcgtctctgaattttgcgaaatatctatttagtccctaaattttacagacgtctatcaaaatggtccc 50556107  T
Q  151 tccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaat 250  Q
    |||||||||||| |||||||||| || ||   || |  | |||||| ||||||||| | || ||||||||| |||| ||||||||||||||||||||| |    
T  50556106 tccgtccaaaagctccgttagtggtgatggcgtgtcatcttgcatgctgtgttgtcatgtacacgtgtcaacaagggagtcacgtgtacaaggactaatt 50556007  T
Q  251 tgatggaaa 259  Q
    |||||||||    
T  50556006 tgatggaaa 50555998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 92 - 259
Target Start/End: Original strand, 15104497 - 15104664
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||| |||  |||| |||||||  |  ||||||||||||||||||| |||||||||||| ||| |||||| || |||  || || | |    
T  15104497 aattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccttccgtccaaaagctccattagtggtgatgatgtgtcttctt 15104596  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||| ||||||||||| || ||||||||| |||| || |||||||||||||||||| ||||||||||    
T  15104597 gcatgctgtgttgtcttgtacacgtgtcaataaggcagccacgtgtacaaggactaatttgatggaaa 15104664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 92 - 259
Target Start/End: Complemental strand, 25278436 - 25278269
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||| | |||  ||||||||||||  | ||||||||||||||||||||||||||||||||| |||||||||| || |||  || |  | |    
T  25278436 aattttgcgaaatacctatttagtccttgaattttacatacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtgtcctctt 25278337  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||| |||| |||| | || ||||||||| |||| || |||||||| ||||||||||||||||||||    
T  25278336 gcatgatgtgctgtcatgtacacgtgtcaacaaggcagccacgtgtataaggactaaattgatggaaa 25278269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 92 - 259
Target Start/End: Original strand, 37344398 - 37344565
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||| | |||  ||| ||||||||  | ||||||||||||||||||||||||||||||||| |||||||||| || |||  || |  | |    
T  37344398 aattttgcgaaatacctatttagtctttgaattttacatacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtgtcctctt 37344497  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||| ||||||||| | || ||||||||| |||| || |||||||| ||||||||||||||||||||    
T  37344498 gcatgatgtgttgtcatgtacacgtgtcaacaaggcagccacgtgtataaggactaaattgatggaaa 37344565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 92 - 259
Target Start/End: Original strand, 27087339 - 27087505
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||| |||  |||| |||||||  |  |||||||||||||||| || |||||||||||| |||||||||| || |||  || | || |    
T  27087339 aattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggcccatccgtccaaaagctccgttagtggtgatgatgtgtc-cctt 27087437  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||| ||||||||||| || ||||||||| |||| || |||||||||||||||| ||||||||||||    
T  27087438 gcatgctgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactgaattgatggaaa 27087505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 92 - 259
Target Start/End: Complemental strand, 33602712 - 33602545
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    ||||||| |||||||||| |  |||| |||||||  |  |||||| ||||| | ||||||||||||||||||||||||||| ||| |||  ||||| | |    
T  33602712 aattttgtgaaatatcaaattagtccctgaattttacagacgtccgtcaaattagtccctccgtccaaaaggtccgttagtaatgatgatgtggcttctt 33602613  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||||||||||||||| || ||||||||  |||  || || ||||||||||||||||||||||||||    
T  33602612 gcatgttgtgttgtcttgtacacgtgtcagcaagtcagccatgtgtacaaggactaaattgatggaaa 33602545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 131 - 259
Target Start/End: Complemental strand, 6818707 - 6818579
Alignment:
Q  131 acgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagt 230  Q
    |||||||||||||||||||||||||||||||| |||||||||| || |||  || |  | |||||||||||||||| | || ||||||||| |||| ||     
T  6818707 acgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgacatgtcctcttgcatgttgtgttgtcatgtacacgtgtcaacaaggcagc 6818608  T
Q  231 cacgtgtacaaggactaaattgatggaaa 259  Q
    |||||||||||||||||| ||||| ||||    
T  6818607 cacgtgtacaaggactaatttgatagaaa 6818579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 131 - 259
Target Start/End: Original strand, 2869674 - 2869802
Alignment:
Q  131 acgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagt 230  Q
    |||||||||||||||||||||||||||||||| || ||||||| || |||  || |  | |||||| ||||||||| | || ||||||||| |||| ||     
T  2869674 acgtccatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgtgtcatcttgcatgatgtgttgtcctgtacacgtgtcaacaaggcagc 2869773  T
Q  231 cacgtgtacaaggactaaattgatggaaa 259  Q
    ||| |||||||||||||||||||||||||    
T  2869774 cacatgtacaaggactaaattgatggaaa 2869802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 134 - 270
Target Start/End: Original strand, 43868712 - 43868848
Alignment:
Q  134 tccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcac 233  Q
    ||||||||||| |||| |||||||||| | |||||||||| ||||||| || |  | |||||||  ||||||||| || ||||||| | |||||||||||    
T  43868712 tccatcaaaatagtccttccgtccaaatgctccgttagtgctgctgagttgtcgtcatgcatgtcatgttgtcttgtacacgtgtctacaaggaagtcac 43868811  T
Q  234 gtgtacaaggactaaattgatggaaacacaaaaaatt 270  Q
    |||||||||||| || ||||||||||| | |||||||    
T  43868812 gtgtacaaggaccaatttgatggaaacgctaaaaatt 43868848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 92 - 259
Target Start/End: Complemental strand, 31238563 - 31238396
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||| |||  |||| |||||||  |  ||||||||||||||||||| || ||||||||| |||||||||| || |||  || |  | |    
T  31238563 aattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccatctgtccaaaagctccgttagtggtgatgacgtgtcctctt 31238464  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
     |||| ||||||||| | || ||||||||| |||| || |||||||||||||||||| ||||||||||    
T  31238463 ccatgctgtgttgtcatgtacacgtgtcaacaaggcagccacgtgtacaaggactaatttgatggaaa 31238396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 92 - 254
Target Start/End: Complemental strand, 46638875 - 46638713
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||| ||||||||||||| |  |||||||||||| ||  ||||||| ||||| |||||||||||||||  | ||||||||  ||||||| ||| | || |    
T  46638875 aattatgcgaaatatcaacttagtccttgaatttgtcagacgtccaccaaaaaggtccctccgtccaagtgctccgttagccatgctgatctgtcgcctt 46638776  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgat 254  Q
    ||||||||||||||||| ||  |||| ||||||||||| ||||||| || |||| || |||||    
T  46638775 gcatgttgtgttgtcttgtacgcgtggcaaaaaggaagccacgtgttcagggacgaatttgat 46638713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 92 - 255
Target Start/End: Complemental strand, 46583624 - 46583461
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||||| |  |||| |||||||  |  |||||||||||| | ||||||||||||||||||||||||| || || |||  ||||| | |    
T  46583624 aattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaatttgtccctccgtccaaaaggtccgttaatggtgatgatgtggcttctt 46583525  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatg 255  Q
    ||||| | | ||||| | || ||||||||  |||  || |||||||||||||||||||||||||    
T  46583524 gcatgctttcttgtcatgtacacgtgtcagcaagtcagccacgtgtacaaggactaaattgatg 46583461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 92 - 254
Target Start/End: Original strand, 42134538 - 42134700
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||| ||||||||||||| |  |||| ||||||| ||  ||||||||||||| |||||||||||||||  | ||||||||  ||| |||  || | ||||    
T  42134538 aattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtccaagtgctccgttagccatgttgacatgtcaccct 42134637  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgat 254  Q
    ||||| ||||||||||| || ||||| ||| ||||||| ||| ||| |||||||||| |||||    
T  42134638 gcatgctgtgttgtcttgtacacgtggcaagaaggaagccacatgttcaaggactaatttgat 42134700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 259
Target Start/End: Complemental strand, 3013494 - 3013371
Alignment:
Q  136 catcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgt 235  Q
    ||||||||| ||||||||||||||||| |||||||||| || |||  |  |  | ||||||  |||||||| | || ||||||||| |||| || |||||    
T  3013494 catcaaaatagtccctccgtccaaaagctccgttagtggtgatgatgtatcctcttgcatgccgtgttgtcatgtacacgtgtcaacaaggcagccacgt 3013395  T
Q  236 gtacaaggactaaattgatggaaa 259  Q
    ||||||||||||||||||||||||    
T  3013394 gtacaaggactaaattgatggaaa 3013371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 92 - 254
Target Start/End: Complemental strand, 45381052 - 45380890
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||| ||||||||||||| |  || | ||||||| ||  ||||||||||||| ||| |||||||||||  | ||||||||  ||| |||  || | ||||    
T  45381052 aattatgcgaaatatcaacttagttcatgaatttgtcagacgtccatcaaaaaggttcctccgtccaagtgctccgttagccatggtgacatgtcgccct 45380953  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgat 254  Q
    ||||| ||||||||||| || ||||| ||| ||||||| ||||||| |||||||||| |||||    
T  45380952 gcatgctgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 45380890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 254
Target Start/End: Original strand, 31801689 - 31801851
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||| ||||||||||||| |  |||||| ||||| |   ||||||||||||| |||||||||||||||  | ||||||||  |||||||  || |  | |    
T  31801689 aattatgcgaaatatcaacttagtccttaaatttgtgagacgtccatcaaaaaggtccctccgtccaagtgctccgttagccatgctgatttgtcgtctt 31801788  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgat 254  Q
    ||||||||||||||||| ||  |||| ||| ||||||||||||||| || |||| || |||||    
T  31801789 gcatgttgtgttgtcttgtacgcgtggcaagaaggaagtcacgtgttcagggacgaatttgat 31801851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 254
Target Start/End: Complemental strand, 36895578 - 36895416
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||| ||||||||||||| |  |||| ||||||| ||  ||||||||||||| ||||||| |||||||  | ||||||||  ||||||| ||| |  | |    
T  36895578 aattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtcccttcgtccaagtgctccgttagccatgctgatctgtcgtctt 36895479  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgat 254  Q
    ||||||||||||||||| ||  |||| ||| ||||||| ||||||| || |||| || |||||    
T  36895478 gcatgttgtgttgtcttgtacgcgtggcaagaaggaagccacgtgttcagggacgaatttgat 36895416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 192 - 258
Target Start/End: Complemental strand, 18183912 - 18183846
Alignment:
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaa 258  Q
    ||||||||||||||||| || ||||| |||||| |||| ||||||| |||||||||| |||||||||    
T  18183912 gcatgttgtgttgtcttgtacacgtggcaaaaaagaagccacgtgttcaaggactaatttgatggaa 18183846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 191 - 259
Target Start/End: Complemental strand, 26225523 - 26225455
Alignment:
Q  191 tgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    |||||| ||||||||||| || ||||||||| || | || ||| |||||||||||||||||||||||||    
T  26225523 tgcatgatgtgttgtcttgtacacgtgtcaacaaagcagccacatgtacaaggactaaattgatggaaa 26225455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 254
Target Start/End: Complemental strand, 33685221 - 33685155
Alignment:
Q  188 ccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgat 254  Q
    |||||||||||| |||||||| || ||||| ||| ||||||| ||||||| |||||||||| |||||    
T  33685221 ccctgcatgttgagttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 33685155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 173
Target Start/End: Complemental strand, 51896220 - 51896139
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtg 173  Q
    |||||||||||||||| |||  |||| |||||||  |  | |||||||||||| ||||||||||||||||| || |||||||    
T  51896220 aattttgcgaaatatctatttagtccctgaattttacagatgtccatcaaaatagtccctccgtccaaaagctctgttagtg 51896139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 5783502 - 5783566
Alignment:
Q  195 tgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    |||||||||| ||| || |||||  |||||| ||| |||||||||| ||||||||||||||||||    
T  5783502 tgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 5783566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 5783442 - 5783501
Alignment:
Q  114 gtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtg 173  Q
    |||| ||||||| | | |||||||||||  | ||||||||||||||||||||||||||||    
T  5783442 gtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagtg 5783501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 155
Target Start/End: Original strand, 27940664 - 27940727
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgt 155  Q
    |||| |||||||||||||||   ||||||||||| ||  ||||||||||||| |||||||||||    
T  27940664 aattatgcgaaatatcaatttaatccttgaatttatcagacgtccatcaaaaaggtccctccgt 27940727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 125
Target Start/End: Complemental strand, 51123604 - 51123557
Alignment:
Q  78 caaaatcgtcttcaaattttgcgaaatatcaattgcgtccttgaattt 125  Q
    |||||| ||| ||||||||||||||||||||||| ||||| |||||||    
T  51123604 caaaattgtcctcaaattttgcgaaatatcaatttcgtccctgaattt 51123557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 242
Target Start/End: Original strand, 44157585 - 44157639
Alignment:
Q  188 ccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaag 242  Q
    ||||||||||||||||||||| || ||||| ||| ||||||| ||||||| ||||    
T  44157585 ccctgcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaag 44157639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 259
Target Start/End: Complemental strand, 51896114 - 51896086
Alignment:
Q  231 cacgtgtacaaggactaaattgatggaaa 259  Q
    |||||||||||||||||||||||||||||    
T  51896114 cacgtgtacaaggactaaattgatggaaa 51896086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 89; Significance: 7e-43; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 78 - 270
Target Start/End: Original strand, 27349198 - 27349380
Alignment:
Q  78 caaaatcgtcttcaaattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgc 177  Q
    |||||||| | ||||||||||||||||||| |||  |||||||||||||||| ||||| ||||||||||||||||||||||||| ||| |||||||||||    
T  27349198 caaaatcgacctcaaattttgcgaaatatcgattttgtccttgaatttctctcacgtctatcaaaatggtccctccgtccaaaaagtctgttagtgatgc 27349297  T
Q  178 tgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaacacaaaaaatt 270  Q
    ||||||  ||||||||||||| |||| ||  || |||        ||||||| |||||||||||||||||||||||||||||| |||||||||    
T  27349298 tgagctaactccctgcatgttttgttttc--atgtac--------aaggaagccacgtgtacaaggactaaattgatggaaacgcaaaaaatt 27349380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 92 - 259
Target Start/End: Original strand, 17574374 - 17574540
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||| |||  |||| |||||||  |  |||||||||||||||||||||||||||||||| |||||||||| || |||  || | || |    
T  17574374 aattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtgtc-cctt 17574472  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||| ||||||||||| || ||||||||| |||| || |||||||||||||||||||||||||||||    
T  17574473 gcatgctgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 17574540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 92 - 259
Target Start/End: Complemental strand, 30468348 - 30468181
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||| |||  ||||||||||||  |  |||||||||||||||||||||||||||||||| |||||||||| || |||  || |  | |    
T  30468348 aattttgcgaaatatctatttagtccttgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtgtcctctt 30468249  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||||||||||||| | || ||||||||| |||| |  |||||||||||||||||| ||||||||||    
T  30468248 gcatgttgtgttgtcatgtacacgtgtcaacaaggcaaccacgtgtacaaggactaatttgatggaaa 30468181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 92 - 259
Target Start/End: Original strand, 7267899 - 7268065
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||| |||  |||| |||||||  |  ||||||||||||||| |||||||||||||||| |||||||||| || |||  ||  |||||    
T  7267899 aattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatgatccctccgtccaaaagctccgttagtggtgatgacgtg--tccct 7267996  T
Q  192 -gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
     ||||| ||||||||||| || ||||||||| |||| || |||||||||||||||||||||||||||||    
T  7267997 cgcatgatgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 7268065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 132 - 259
Target Start/End: Complemental strand, 18625036 - 18624909
Alignment:
Q  132 cgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtc 231  Q
    |||||||||||||||||| |||||||||||| |||||||||  || |||  || || | ||||||||||||||||||||| ||||||||| |||| |  |    
T  18625036 cgtccatcaaaatggtccttccgtccaaaagctccgttagtagtgatgatgtgtcttcttgcatgttgtgttgtcttatacacgtgtcaacaaggcaacc 18624937  T
Q  232 acgtgtacaaggactaaattgatggaaa 259  Q
    ||||||||||||||||| ||||||||||    
T  18624936 acgtgtacaaggactaatttgatggaaa 18624909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 92 - 259
Target Start/End: Original strand, 34327691 - 34327858
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||| |||  |||| |||||||  |  |||||||||||||||||| ||||||||||||| || ||||||| || |||  || |  | |    
T  34327691 aattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtctctccgtccaaaagctctgttagtggtgatgatgtgtcctctt 34327790  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    |||||||| |||||| | || ||||||||| |||| || |||||||||||||||||||||||||||||    
T  34327791 gcatgttgcgttgtcatgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 34327858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 92 - 259
Target Start/End: Original strand, 8539731 - 8539898
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||| |||  |||| |||||||  |  |||||||||||||| ||| |||| |||||||| |||||||||| || ||   || |  | |    
T  8539731 aattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatagtcgctccatccaaaagctccgttagtgttgatggtgtgtcctctt 8539830  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||||||||||||| | || ||||||||| |||| || ||||||| |||||||||||||||||||||    
T  8539831 gcatgttgtgttgtcatgtacacgtgtcaacaaggcagccacgtgtgcaaggactaaattgatggaaa 8539898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 92 - 247
Target Start/End: Complemental strand, 36057681 - 36057526
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||| |||  | || |||||||  |  |||||||||||||||||||||||||||||||| ||||||| || || |||  || |  | |    
T  36057681 aattttgcgaaatatctatttagaccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttaatggtgatgatgtgtcatctt 36057582  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggacta 247  Q
    ||||||||||||||| | || ||||||||| |||| || ||| |||||||||||||    
T  36057581 gcatgttgtgttgtcatgtacacgtgtcaacaaggcagccacatgtacaaggacta 36057526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 134 - 255
Target Start/End: Original strand, 2179885 - 2180006
Alignment:
Q  134 tccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcac 233  Q
    ||||||||||||||||||||||||||||| ||| |||||| || |||  || |  | |||||||||||||||| | || ||||||||| |||| || |||    
T  2179885 tccatcaaaatggtccctccgtccaaaagctccattagtggtgatgacatgtcctcttgcatgttgtgttgtcatgtacacgtgtcaacaaggcagccac 2179984  T
Q  234 gtgtacaaggactaaattgatg 255  Q
     |||||||||||||| ||||||    
T  2179985 atgtacaaggactaatttgatg 2180006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 255
Target Start/End: Complemental strand, 35292450 - 35292287
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||| ||||||||||||| |  |||| ||||||| ||  |||||||| |||| ||| |||||||||||| | ||||||||  || |||| ||| | |||     
T  35292450 aattatgcgaaatatcaacttagtccctgaatttgtcagacgtccataaaaaaggttcctccgtccaaatgctccgttagctattctgatctgtcgccca 35292351  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatg 255  Q
     ||||||||| |||||| || ||||| |||||||||||  |||||| |||||||||| ||||||    
T  35292350 acatgttgtgctgtcttgtacacgtggcaaaaaggaagctacgtgttcaaggactaatttgatg 35292287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 92 - 254
Target Start/End: Complemental strand, 38178161 - 38177999
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||| |||||||||||||||  ||   ||||||| ||  ||||||||||||| ||||||| ||||||   | ||||||||  |||||||  || |  |||    
T  38178161 aattatgcgaaatatcaatttagtatctgaatttgtcagacgtccatcaaaaaggtcccttcgtccatgtgctccgttagccatgctgatatgtcgtcct 38178062  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgat 254  Q
    ||||| ||||||||||| || ||||  ||||||||||||||||||| |||||||||| |||||    
T  38178061 gcatgctgtgttgtcttgtacacgtagcaaaaaggaagtcacgtgttcaaggactaacttgat 38177999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 92 - 254
Target Start/End: Complemental strand, 38205385 - 38205223
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||| |||||||||||||||  ||   ||||||| ||  ||||||||||||| ||||||| ||||||   | ||||||||  |||||||  || |  |||    
T  38205385 aattatgcgaaatatcaatttagtatctgaatttgtcagacgtccatcaaaaaggtcccttcgtccatgtgctccgttagccatgctgatatgtcgtcct 38205286  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgat 254  Q
    ||||| ||||||||||| || ||||  ||||||||||||||||||| |||||||||| |||||    
T  38205285 gcatgctgtgttgtcttgtacacgtagcaaaaaggaagtcacgtgttcaaggactaacttgat 38205223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 92 - 255
Target Start/End: Complemental strand, 43318128 - 43317965
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||| ||||||||||||| |  |||| ||||||| ||  |||||||| |||| |||||||||||||||  | || |||||  |||| ||  || | |||     
T  43318128 aattatgcgaaatatcaacttagtccctgaatttgtcagacgtccataaaaaaggtccctccgtccaagtgctctgttagccatgccgatatgtcgccca 43318029  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatg 255  Q
    |||||||||| |||||| || | ||| ||||||||||| ||||||| |||||||||| ||||||    
T  43318028 gcatgttgtgctgtcttgtacatgtggcaaaaaggaagccacgtgttcaaggactaatttgatg 43317965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 254
Target Start/End: Complemental strand, 18728670 - 18728508
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||| ||||||||||||| |  |||| ||||||| ||  ||||||||||||| |||||||||||||||  | || |||||   |||||| ||| | || |    
T  18728670 aattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtccaagtgctctgttagccttgctgatctgtcacctt 18728571  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgat 254  Q
    ||||| ||||||||||| || ||||| ||| ||||||| |||||||  | ||||||| |||||    
T  18728570 gcatgctgtgttgtcttgtacacgtggcaagaaggaagccacgtgttaagggactaatttgat 18728508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 131 - 248
Target Start/End: Original strand, 38597040 - 38597157
Alignment:
Q  131 acgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagt 230  Q
    ||||||||||||| |||||||| ||||||  | ||||||||   |||||| ||| | ||||||||| ||||||||||| || ||||| ||| |||||||     
T  38597040 acgtccatcaaaaaggtccctctgtccaagtgttccgttagccgtgctgatctgtcgccctgcatgctgtgttgtcttgtacacgtggcaagaaggaagc 38597139  T
Q  231 cacgtgtacaaggactaa 248  Q
    | ||||| ||||||||||    
T  38597140 cgcgtgttcaaggactaa 38597157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 131 - 259
Target Start/End: Complemental strand, 2854356 - 2854229
Alignment:
Q  131 acgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagt 230  Q
    ||||||| |||| | ||||||||||||||||||||| ||| |  || |||  ||||| | |||||| | ||||||||| || ||||||||  |||  ||     
T  2854356 acgtccaacaaattcgtccctccgtccaaaaggtccattaatagtgatgatgtggcttcttgcatgct-tgttgtcttgtacacgtgtcagcaagtcagc 2854258  T
Q  231 cacgtgtacaaggactaaattgatggaaa 259  Q
    |||||||||||||||||||||||||||||    
T  2854257 cacgtgtacaaggactaaattgatggaaa 2854229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 255
Target Start/End: Original strand, 28819391 - 28819506
Alignment:
Q  140 aaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtac 239  Q
    ||||||||||||||||||||||| ||||||||||||| |||  || |  | | |||| |||| |||| | || ||||||||| |||| |  |||||| ||    
T  28819391 aaaatggtccctccgtccaaaagctccgttagtgatgatgatgtgtcctcttacatgatgtgatgtcatgtacacgtgtcaacaaggcaaccacgtgcac 28819490  T
Q  240 aaggactaaattgatg 255  Q
    ||||||||||||||||    
T  28819491 aaggactaaattgatg 28819506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 131 - 245
Target Start/End: Original strand, 24496838 - 24496952
Alignment:
Q  131 acgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagt 230  Q
    |||| |||||||||||||| |||||||||| | || |||| |  |||||| ||| |  |||||||| | ||||||||  || ||||||||| ||||||||    
T  24496838 acgttcatcaaaatggtccatccgtccaaatgttctgttactattgctgatctgtcgtcctgcatgctatgttgtctcgtacacgtgtcaacaaggaagt 24496937  T
Q  231 cacgtgtacaaggac 245  Q
    || ||||||||||||    
T  24496938 catgtgtacaaggac 24496952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 259
Target Start/End: Complemental strand, 24541280 - 24541112
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtc-cctccgtccaaaaggtccgttagtgatgctgagctggctccc 190  Q
    |||||||||||||||||| |  |||| |||||||  |  |||||||||||| |  || |||||||||||||||||  ||| |  || |||  ||||| |     
T  24541280 aattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaattcatctcctccgtccaaaaggtctattaatagtgatgatgtggcttct 24541181  T
Q  191 tgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    |||||| | ||||||| | || ||||||||  |||  || ||| |||||||||||||||||||||||||    
T  24541180 tgcatgctttgttgtcctgtacacgtgtcagcaagtcagccacatgtacaaggactaaattgatggaaa 24541112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 254
Target Start/End: Original strand, 33256456 - 33256618
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||| ||||||||||||| |   || |||||||| ||  |||||||||||||  ||||||||||||||    ||||||||   |||||| ||| | || |    
T  33256456 aattatgcgaaatatcaacttaatctttgaatttgtcagacgtccatcaaaaaagtccctccgtccaagtcctccgttagccttgctgatctgtcacctt 33256555  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgat 254  Q
    ||||| ||||||||||| ||   ||| ||| ||||||| ||||||| || ||||||| |||||    
T  33256556 gcatgctgtgttgtcttgtacgagtggcaagaaggaagccacgtgttcagggactaatttgat 33256618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 259
Target Start/End: Original strand, 21841186 - 21841214
Alignment:
Q  231 cacgtgtacaaggactaaattgatggaaa 259  Q
    |||||||||||||||||||||||||||||    
T  21841186 cacgtgtacaaggactaaattgatggaaa 21841214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 259
Target Start/End: Complemental strand, 32135778 - 32135750
Alignment:
Q  231 cacgtgtacaaggactaaattgatggaaa 259  Q
    |||||||||||||||||||||||||||||    
T  32135778 cacgtgtacaaggactaaattgatggaaa 32135750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 2e-37; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 92 - 259
Target Start/End: Complemental strand, 53190847 - 53190681
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||| |||  |||| |||||||  |  |||||||||||||||||||||||||||||||| |||||||||| || |||  || | || |    
T  53190847 aattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtgtc-cctt 53190749  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||||||||||||||| || ||||||||| |||| || |||||||||||||||||||||||||||||    
T  53190748 gcatgttgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 53190681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 92 - 259
Target Start/End: Complemental strand, 23293258 - 23293091
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||| |||  |||| |||||||  |  |||||||||||||| ||||||||||||||||| |||||||||| || |||  || |  | |    
T  23293258 aattttgcgaaatatctatttagtccatgaattttacaaacgtccatcaaaatagtccctccgtccaaaagctccgttagtggtgatgatgtgtcctctt 23293159  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||||||||||||| | || ||||||||| |||| || |||||||||||||||||||||||||||||    
T  23293158 gcatgttgtgttgtcatgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 23293091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 92 - 259
Target Start/End: Original strand, 41977806 - 41977972
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    ||||| |||||||||||| |  |||| |||||||  |  |||||| ||||||||||||||||||||||||| | ||||| || || |||  || | || |    
T  41977806 aatttggcgaaatatcaaattagtccctgaattttacagacgtccgtcaaaatggtccctccgtccaaaagcttcgttaatggtgatgacgtgtc-cctt 41977904  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||||||||||||||| || ||||||||| |||| ||||||||||||||||||||||||||||||||    
T  41977905 gcatgttgtgttgtcttgtacacgtgtcaacaaggcagtcacgtgtacaaggactaaattgatggaaa 41977972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 92 - 259
Target Start/End: Original strand, 42279563 - 42279730
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||| ||||||| |||  |||| |||||||  |  ||||| |||||||||||||||||||||||||| || ||||||| || |||  || |  | |    
T  42279563 aattttgcaaaatatctatttagtccctgaattttacagacgtctatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgtgtcctctt 42279662  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    |||||||||||||||||||| ||||||||| |||| || |||||||||||||||||| ||||||||||    
T  42279663 gcatgttgtgttgtcttatacacgtgtcaacaaggcagacacgtgtacaaggactaatttgatggaaa 42279730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 92 - 259
Target Start/End: Original strand, 51684666 - 51684833
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||| ||||||| |||  ||||||||||||  |  |||||||||||||||||||||||||||||||| |||||||||| || |||  || |  | |    
T  51684666 aattttgcaaaatatctatttagtccttgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgtgtcctctt 51684765  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    || |||||||||||| | || ||||||||| |||| || |||||||||||||||||| ||||||||||    
T  51684766 gcgtgttgtgttgtcctgtacacgtgtcaacaaggcagacacgtgtacaaggactaatttgatggaaa 51684833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 92 - 259
Target Start/End: Original strand, 54898493 - 54898659
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||| |||  |||| |||||||  |  |||| ||||||||||||| ||||||||||||| ||||||||||| | |||  || | || |    
T  54898493 aattttgcgaaatatctatttagtccctgaattttacagacgttcatcaaaatggtctctccgtccaaaagctccgttagtgacgatgacgtgtc-cctt 54898591  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    |||||||| |||||||| || ||||||||| |||| || |||||||||||||||||||||||||||||    
T  54898592 gcatgttgcgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 54898659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 131 - 259
Target Start/End: Complemental strand, 7884922 - 7884795
Alignment:
Q  131 acgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagt 230  Q
    |||||||||||||||||||||||||||||||| |||||||||| || |||  || | || |||||||||||||||||| || ||||||||| |||| ||     
T  7884922 acgtccatcaaaatggtccctccgtccaaaagttccgttagtggtgatgacatgtc-ccttgcatgttgtgttgtcttgtacacgtgtcaacaaggcagc 7884824  T
Q  231 cacgtgtacaaggactaaattgatggaaa 259  Q
    ||| |||| ||||||||||||||||||||    
T  7884823 cacatgtataaggactaaattgatggaaa 7884795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 92 - 259
Target Start/End: Complemental strand, 27899169 - 27899002
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||| |||  |||| |||||||  |  |||||||| ||||||||||||||||||||||| |||||||||| || |||  || |  | |    
T  27899169 aattttgcgaaatatctatttagtccctgaattttacagacgtccataaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtgtcctctt 27899070  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||||||||||||| | || ||||||||| |||| || || ||||||||||||||| ||||||||||    
T  27899069 gcatgttgtgttgtcatgtacacgtgtcaacaaggcagccatgtgtacaaggactaatttgatggaaa 27899002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 92 - 259
Target Start/End: Complemental strand, 35905800 - 35905634
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||| |||  |||| |||||||  |  |||| ||||||||||||||||||||||||||| |||| ||||| || |||  || | || |    
T  35905800 aattttgcgaaatatctatttagtccctgaattttacagacgttcatcaaaatggtccctccgtccaaaagctccggtagtggtgatgacgtgtc-cctt 35905702  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||| || |||||||| || ||||||||| |||| || |||||||||||||||||||||||||||||    
T  35905701 gcatgatgggttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 35905634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 92 - 259
Target Start/End: Complemental strand, 2226240 - 2226074
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||| |||  |||| |||||||  |  |||| |||||||||| |||||||||||||||  || ||||||| || |||  || | || |    
T  2226240 aattttgcgaaatatctatttagtccctgaattttacagacgttcatcaaaatgttccctccgtccaaaaactctgttagtggtgatgacgtgtc-cctt 2226142  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||| ||||||||||| || ||||||||| |||| || |||||||||||||||||||||||||||||    
T  2226141 gcatgctgtgttgtcttgtacacgtgtcaacaaggtagccacgtgtacaaggactaaattgatggaaa 2226074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 92 - 259
Target Start/End: Original strand, 17515366 - 17515533
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||| |||  |||| |||||||  |  |||||||||||||||||||||| ||||||||   ||||||||| || |||  || |    |    
T  17515366 aattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctctgtccaaaatcaccgttagtggtgatgatgtgtcctttt 17515465  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||||||||||||||| || || |||||| |||| || |||||||||||||||||||||||||||||    
T  17515466 gcatgttgtgttgtcttgtacacttgtcaataaggcagccacgtgtacaaggactaaattgatggaaa 17515533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 131 - 254
Target Start/End: Complemental strand, 24382922 - 24382799
Alignment:
Q  131 acgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagt 230  Q
    ||||||||||||| |||||||||||||||    ||||||||  |||||||  || | |||||||||||||||||||||||||||| | |||||||||||     
T  24382922 acgtccatcaaaaaggtccctccgtccaagtcatccgttagccatgctgatatgtcgccctgcatgttgtgttgtcttatatacggggcaaaaaggaagc 24382823  T
Q  231 cacgtgtacaaggactaaattgat 254  Q
    ||||||| |||||||||| |||||    
T  24382822 cacgtgttcaaggactaatttgat 24382799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 92 - 259
Target Start/End: Complemental strand, 30600006 - 30599839
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||| |||  |||| |||||||     ||||| |||||||||||||||||||||||||| || ||||||| || |||  || |  | |    
T  30600006 aattttgcgaaatatctatttagtccctgaattttagagacgtcgatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgtgtcctctt 30599907  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||| ||||||||||| || || |||||| |||| || |||||||||||||||||||||||||||||    
T  30599906 gcatgctgtgttgtcttgtacacatgtcaataaggcagccacgtgtacaaggactaaattgatggaaa 30599839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 131 - 270
Target Start/End: Original strand, 41623747 - 41623886
Alignment:
Q  131 acgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagt 230  Q
    |||||||||||||| |||| ||||| |||| | |||||||||| | |||||||| |   ||||||||  ||||||||| |||||||||| | |||||||     
T  41623747 acgtccatcaaaatagtccttccgttcaaatgctccgttagtgctactgagctgtcgttctgcatgtcttgttgtcttgtatacgtgtctacaaggaagc 41623846  T
Q  231 cacgtgtacaaggactaaattgatggaaacacaaaaaatt 270  Q
    ||||||||||||||| || ||||||||||||| |||||||    
T  41623847 cacgtgtacaaggaccaatttgatggaaacactaaaaatt 41623886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 131 - 259
Target Start/End: Original strand, 43765232 - 43765360
Alignment:
Q  131 acgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagt 230  Q
    ||||||||||||||||||||||| |||||||| |||||||||| || |||  || |  | | |||||||||||||| | || ||||||||| |||| ||     
T  43765232 acgtccatcaaaatggtccctccatccaaaagctccgttagtggtgatgatgtgtcctcttacatgttgtgttgtcatgtacacgtgtcaacaaggcagc 43765331  T
Q  231 cacgtgtacaaggactaaattgatggaaa 259  Q
    ||||||||||| |||||||||||||||||    
T  43765332 cacgtgtacaatgactaaattgatggaaa 43765360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 131 - 259
Target Start/End: Complemental strand, 48830855 - 48830727
Alignment:
Q  131 acgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagt 230  Q
    |||||||||||||||||||||||||||||||| || ||||||| || |||  || |  | |||||||||||||||| | || ||||||||| |||| |      
T  48830855 acgtccatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgtgtcctcttgcatgttgtgttgtcatgtacacgtgtcaacaaggcaac 48830756  T
Q  231 cacgtgtacaaggactaaattgatggaaa 259  Q
    |||||||||||||||||| ||||||||||    
T  48830755 cacgtgtacaaggactaatttgatggaaa 48830727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 132 - 259
Target Start/End: Original strand, 600805 - 600932
Alignment:
Q  132 cgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtc 231  Q
    ||||||||||||||||||||||||| ||||| |||||||||| || |||  || |  | |||||||||||||||| | || ||||||||| || | || |    
T  600805 cgtccatcaaaatggtccctccgtctaaaagctccgttagtggtgatgacgtgtcctcttgcatgttgtgttgtcatgtacacgtgtcaacaaagcagcc 600904  T
Q  232 acgtgtacaaggactaaattgatggaaa 259  Q
    |||||||||||||||||||| |||||||    
T  600905 acgtgtacaaggactaaattaatggaaa 600932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 92 - 255
Target Start/End: Original strand, 21348779 - 21348942
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||| |||  |||| |||||||  |  |||||||||||||||||||||||||||||||| || ||||||| || | |  || |  | |    
T  21348779 aattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctctgttagtggtgataatgtgtcctctt 21348878  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatg 255  Q
    ||||||||||||||| | || ||||||||| ||||  | ||||||||||| |||||||||||||    
T  21348879 gcatgttgtgttgtcatgtacacgtgtcaataaggcggccacgtgtacaaagactaaattgatg 21348942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 168 - 235
Target Start/End: Original strand, 33050289 - 33050356
Alignment:
Q  168 ttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgt 235  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||||    
T  33050289 ttagtgatgctgagctggctccctgcatgttgtgttgtcatatacacgtgtcaaaaagaaagtcacgt 33050356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 92 - 259
Target Start/End: Original strand, 46112543 - 46112710
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||| ||||||| |||  |||| |||||||  |  ||||||||||||||||||||||||| |||||| |  ||||||| || |||  || |  | |    
T  46112543 aattttgcaaaatatctatttagtccatgaattttacagacgtccatcaaaatggtccctccgttcaaaagctatgttagtggtgatgacgtgtcctctt 46112642  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||||||||||||| | || ||||||||| |||  |||||||||||||| |||||||||||||||||    
T  46112643 gcatgttgtgttgtcatgtacacgtgtcaacaagtcagtcacgtgtacaaagactaaattgatggaaa 46112710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 92 - 259
Target Start/End: Original strand, 2660268 - 2660435
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||||| |  ||||||||||||  |  |||||||||||| | |||||||||||||||||||| |||| | | | |||  ||||| | |    
T  2660268 aattttgcgaaatatcaaattagtccttgaattttacagacgtccatcaaattcgtccctccgtccaaaaggtctgttaataacgatgatgtggcttctt 2660367  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||| | ||||||| | || ||||||||  |||  || ||| |||||||||||||||||||||||||    
T  2660368 gcatgctttgttgtcctctacacgtgtcagcaagtcagccacttgtacaaggactaaattgatggaaa 2660435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 115 - 270
Target Start/End: Original strand, 5125880 - 5126035
Alignment:
Q  115 tccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatac 214  Q
    |||||||||||  |  |||||||||||||| |||| || ||||||| | |||||||||| ||||||| || |  |||||||||  ||||||||| || ||    
T  5125880 tccttgaatttaacaaacgtccatcaaaatagtccttcggtccaaatgctccgttagtgctgctgagttgtcgtcctgcatgtcctgttgtcttgtacac 5125979  T
Q  215 gtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaacacaaaaaatt 270  Q
    ||||| | || |||| ||||||||||||||| || ||||||||||| | |||||||    
T  5125980 gtgtctacaaagaagccacgtgtacaaggaccaatttgatggaaacgctaaaaatt 5126035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 92 - 259
Target Start/End: Original strand, 44794263 - 44794430
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||||| |  |||| |||||||  |  | |||||||||| | ||||||||||||||||||||||||| |  || |||  ||||| | |    
T  44794263 aattttgcgaaatatcaaattagtccctgaattttgcagaagtccatcaaattcgtccctccgtccaaaaggtccgttaatagtgatgatgtggcttctt 44794362  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||| | ||||||| | || ||||||||  |||  || |||||||||||||||||||||||||||||    
T  44794363 gcatgctttgttgtcctgtacacgtgtcagcaagtcagccacgtgtacaaggactaaattgatggaaa 44794430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 92 - 258
Target Start/End: Complemental strand, 2977397 - 2977231
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||| |||||||||||||||  |||| | ||||| || |||||||||||||| ||||| |||| ||||  | |||||||| ||||||||  || | ||||    
T  2977397 aattatgcgaaatatcaattcagtccctaaatttgtcatacgtccatcaaaaaggtccatccgcccaagtgctccgttagcgatgctgatttgtcgccct 2977298  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaa 258  Q
    ||||| | |||||||| ||| ||||| ||| ||||||  ||| ||| |||||||||| |||||||||    
T  2977297 gcatgctatgttgtctaatacacgtggcaagaaggaaaccacatgttcaaggactaatttgatggaa 2977231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 114 - 259
Target Start/End: Complemental strand, 44276262 - 44276117
Alignment:
Q  114 gtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatata 213  Q
    ||||||||||||  |  ||| |||||||||||||||||||||||||||| || ||||||| || |||  || |  | | |||||||||| ||| | || |    
T  44276262 gtccttgaattttacagacgcccatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgtgtcctcttacatgttgtgtcgtcatgtaca 44276163  T
Q  214 cgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    |||||||| |||  || |||||||||||||||||||||||||||||    
T  44276162 cgtgtcaacaagacagccacgtgtacaaggactaaattgatggaaa 44276117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 92 - 254
Target Start/End: Original strand, 48633933 - 48634099
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||| ||||||||||||| |  |||| ||||||| ||  ||||||||||||| |||||||||||||||  | ||||||||  ||| ||| ||| | ||||    
T  48633933 aattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccctccgtccaagtgctccgttagccatgttgatctgtcgccct 48634032  T
Q  192 gcatgttgtg----ttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgat 254  Q
    ||||| ||||    ||||||| || ||||| ||||||||||| ||||||| |||||||||| |||||    
T  48634033 gcatgatgtgttgtttgtcttgtacacgtggcaaaaaggaagccacgtgttcaaggactaatttgat 48634099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 131 - 259
Target Start/End: Original strand, 46197815 - 46197943
Alignment:
Q  131 acgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagt 230  Q
    |||||||| |||||||||||| |||||||||| ||||||||||||| |||  |  |  | |||||||||||||||  | |  ||||||||| |||| ||     
T  46197815 acgtccattaaaatggtcccttcgtccaaaagttccgttagtgatgatgatgtttcctcttgcatgttgtgttgttatgtgcacgtgtcaacaaggcagc 46197914  T
Q  231 cacgtgtacaaggactaaattgatggaaa 259  Q
     ||||||||||||||||||||||||||||    
T  46197915 tacgtgtacaaggactaaattgatggaaa 46197943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 259
Target Start/End: Complemental strand, 3152306 - 3152139
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||||| |  |||| |||||||  |  ||||||||||||   ||||||||||||||||||||||||| |  || |||  ||||| | |    
T  3152306 aattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaatccgtccctccgtccaaaaggtccgttaatagtgatgatgtggcttctt 3152207  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
     |||| | ||||||| | || ||||||||  |||  || |||||||||||||||||||||||||||||    
T  3152206 acatgctttgttgtcatgtacacgtgtcagcaagtcagccacgtgtacaaggactaaattgatggaaa 3152139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 254
Target Start/End: Complemental strand, 33852699 - 33852576
Alignment:
Q  131 acgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagt 230  Q
    ||||||||||||| |||||||| ||||||  | ||||||||  ||| |||  || | ||||||||||||||||||||| || ||||| ||| |||||||     
T  33852699 acgtccatcaaaaaggtccctctgtccaagtgctccgttagccatggtgacatgtcgccctgcatgttgtgttgtcttgtagacgtggcaagaaggaagc 33852600  T
Q  231 cacgtgtacaaggactaaattgat 254  Q
    ||||||| |||||||||| |||||    
T  33852599 cacgtgttcaaggactaatttgat 33852576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 254
Target Start/End: Complemental strand, 45257249 - 45257126
Alignment:
Q  131 acgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagt 230  Q
    |||||||| ||||  ||||||||||||||  | ||||||||| |||||||  || | ||||||||||||||||||||| || ||||| ||| || ||||     
T  45257249 acgtccataaaaaatgtccctccgtccaagtgctccgttagtcatgctgacatgccgccctgcatgttgtgttgtcttgtacacgtggcaagaatgaagc 45257150  T
Q  231 cacgtgtacaaggactaaattgat 254  Q
    ||||||| |||||||||| |||||    
T  45257149 cacgtgttcaaggactaatttgat 45257126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 114 - 260
Target Start/End: Original strand, 5133074 - 5133220
Alignment:
Q  114 gtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatata 213  Q
    ||||||||||||  |  |||||||||||||| |||| |||||||||| | |||||||||| |||||||||| |  | |||||||  ||||||||| || |    
T  5133074 gtccttgaatttaacaaacgtccatcaaaatagtccttccgtccaaatgctccgttagtgctgctgagctgtcgtcatgcatgtcctgttgtcttgtaca 5133173  T
Q  214 cgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaac 260  Q
    |||||| | || |||| |||| |||| ||||| || |||||||||||    
T  5133174 cgtgtctacaaagaagacacgcgtacgaggaccaatttgatggaaac 5133220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 92 - 258
Target Start/End: Complemental strand, 33113248 - 33113083
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||| ||||||||||||| |  |||| | ||||| ||  ||||||||||||| |||||||||||| ||  | ||||||||  |||| || ||| | |||     
T  33113248 aattatgcgaaatatcaacttagtccctaaatttgtcagacgtccatcaaaaaggtccctccgtc-aagtgatccgttagccatgccgatctgtcgccca 33113150  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaa 258  Q
    |||||||| | |||||| || ||||| ||||||||||| ||||||| |||||||||| |||||||||    
T  33113149 gcatgttgcgctgtcttgtacacgtggcaaaaaggaagccacgtgttcaaggactaatttgatggaa 33113083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 92 - 257
Target Start/End: Complemental strand, 31887520 - 31887355
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||| ||||||||||||| |  |||| ||||||| ||  | ||| ||||||| |||||||||||||||  | ||||||||  |||||||  || | || |    
T  31887520 aattatgcgaaatatcaacttagtccctgaatttgtcagatgtctatcaaaaaggtccctccgtccaagtgctccgttagccatgctgatttgtcgcctt 31887421  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatgga 257  Q
    ||||| ||||||||||| || ||||| ||||||||||| ||  ||| |||||||||| ||||||||    
T  31887420 gcatgctgtgttgtcttgtacacgtggcaaaaaggaagccatatgttcaaggactaatttgatgga 31887355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 259
Target Start/End: Original strand, 2377124 - 2377252
Alignment:
Q  131 acgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagt 230  Q
    ||||||||||||||||| |||||||| ||||| |||||||||| || |||  || |  | |||||| ||||||||| | || ||||||||| |||| ||     
T  2377124 acgtccatcaaaatggttcctccgtctaaaagctccgttagtggtgatgacgtgtcctcttgcatgatgtgttgtcatgtacacgtgtcaacaaggcagc 2377223  T
Q  231 cacgtgtacaaggactaaattgatggaaa 259  Q
    ||||||||  |||||||| ||||||||||    
T  2377224 cacgtgtaataggactaatttgatggaaa 2377252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 76 - 139
Target Start/End: Original strand, 33047553 - 33047616
Alignment:
Q  76 gtcaaaatcgtcttcaaattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatc 139  Q
    |||||||| ||| ||||||||||||||||||||||| |||||||||| |||||| |||||||||    
T  33047553 gtcaaaattgtcctcaaattttgcgaaatatcaatttcgtccttgaaattctctcacgtccatc 33047616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 206
Target Start/End: Complemental strand, 40508979 - 40508865
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||| ||||||||||||| |   ||||||||||| ||  |||||||||||||  ||||||||||||||  | |||||||||  |||||| ||| | ||||    
T  40508979 aattatgcgaaatatcaacttaatccttgaatttgtcagacgtccatcaaaaatgtccctccgtccaagtgttccgttagtcgtgctgatctgtcgccct 40508880  T
Q  192 gcatgttgtgttgtc 206  Q
    |||||||||||||||    
T  40508879 gcatgttgtgttgtc 40508865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 92 - 259
Target Start/End: Complemental strand, 19987682 - 19987518
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||||| |  |||| | |||||  |  ||||||||||||   |||||||||||||||||||| ||||||  || |||  ||||| | |    
T  19987682 aattttgcgaaatatcaaattagtccctaaattttacacacgtccatcaaatcagtccctccgtccaaaaggtctgttagtagtgatgatgtggcttctt 19987583  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||| |||||   | | || || |||||| |||  ||||||||||||||||||||||||||||||||    
T  19987582 gcatgctgtgt---cctgtacacatgtcaacaagtcagtcacgtgtacaaggactaaattgatggaaa 19987518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 248
Target Start/End: Original strand, 23774208 - 23774363
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||| |||||||||||||||  |||| ||||||| ||  |||||||||||||  ||||||| ||| ||  | || |||||  ||| ||| ||| | ||||    
T  23774208 aattatgcgaaatatcaatttagtccctgaatttgtcagacgtccatcaaaaaagtccctc-gtctaagtgctctgttagccatgttgatctgtcgccct 23774306  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaa 248  Q
    ||||| ||||||||||| || ||||| ||| ||||||| ||||||| ||||||||||    
T  23774307 gcatgatgtgttgtcttgtacacgtggcaataaggaagccacgtgttcaaggactaa 23774363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 258
Target Start/End: Original strand, 1845879 - 1846006
Alignment:
Q  131 acgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagt 230  Q
    |||||||||||||  ||||||||||||||  | |||||||   ||| |||  || | ||||||||| |||| |||| |||| ||||| |||||||||||     
T  1845879 acgtccatcaaaaacgtccctccgtccaagtgctccgttaaccatgttgatatgtcgccctgcatgatgtgatgtcctatacacgtggcaaaaaggaagc 1845978  T
Q  231 cacgtgtacaaggactaaattgatggaa 258  Q
    ||||||| |||||||||| |||| ||||    
T  1845979 cacgtgttcaaggactaatttgaaggaa 1846006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 254
Target Start/End: Complemental strand, 18430339 - 18430177
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||| ||||||||||||| |  |||| ||||| | ||  |||||||  |||| |||||||||||||||  | ||||||||  ||| |||  || | ||||    
T  18430339 aattatgcgaaatatcaacttagtccctgaatatgtcagacgtccaataaaaaggtccctccgtccaagtgctccgttagccatggtgacatgtcgccct 18430240  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgat 254  Q
    |||||  |||||||||| || ||||| ||| ||||||  ||||||| |||||||||| |||||    
T  18430239 gcatgccgtgttgtcttgtacacgtggcaagaaggaaaccacgtgttcaaggactaatttgat 18430177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 254
Target Start/End: Complemental strand, 23888840 - 23888678
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||| ||||||||||||  |  |||| ||||||| ||  ||||||||||||| ||||||||||||||||   ||||||||   |||||| ||| | || |    
T  23888840 aattatgcgaaatatcagcttagtccctgaatttgtcaaacgtccatcaaaaaggtccctccgtccaaatcctccgttagccttgctgatctgtcgcctt 23888741  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgat 254  Q
    ||||  ||||||||||| ||  |||| ||| ||||||| ||| ||| || ||||||| |||||    
T  23888740 gcatactgtgttgtcttgtacgcgtggcaagaaggaagccacatgttcagggactaatttgat 23888678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 259
Target Start/End: Complemental strand, 26449258 - 26449192
Alignment:
Q  193 catgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    |||||||||||||||| ||||||||| || ||||||| ||| || |||||||| || ||||||||||    
T  26449258 catgttgtgttgtcttgtatacgtgttaacaaggaagccacatggacaaggaccaatttgatggaaa 26449192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 248
Target Start/End: Complemental strand, 51454218 - 51454158
Alignment:
Q  188 ccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaa 248  Q
    ||||||||| |||||||||||||| ||||| ||| ||||| | ||||||| ||||||||||    
T  51454218 ccctgcatgatgtgttgtcttatacacgtggcaagaaggaggccacgtgttcaaggactaa 51454158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 270
Target Start/End: Original strand, 17238261 - 17238316
Alignment:
Q  215 gtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaacacaaaaaatt 270  Q
    ||||||| ||||||||||||||||||||||| || |||||  |||||| |||||||    
T  17238261 gtgtcaacaaggaagtcacgtgtacaaggaccaatttgatataaacactaaaaatt 17238316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 159
Target Start/End: Complemental strand, 45898416 - 45898349
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaa 159  Q
    |||| ||||||||||||| |  |||||||||||| ||  ||||| ||||||| |||||||||||||||    
T  45898416 aattatgcgaaatatcaacttagtccttgaatttgtcagacgtctatcaaaaaggtccctccgtccaa 45898349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 259
Target Start/End: Original strand, 41944715 - 41944776
Alignment:
Q  198 tgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||||| ||| || |||||  |||||||||| | |||||||| ||||||||||||||||||    
T  41944715 tgtgttggcttgtacacgtgggaaaaaggaagccgcgtgtacagggactaaattgatggaaa 41944776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 1e-32; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 92 - 259
Target Start/End: Complemental strand, 8609875 - 8609709
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||| |||  |||| |||||||  |  |||||||||||||||||||||||||||||||| |||||||||| || |||  || | || |    
T  8609875 aattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtgtc-cctt 8609777  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||| ||||||||||| || ||||||| | |||| || |||||||||||||||||||||||||||||    
T  8609776 gcatgctgtgttgtcttgtacacgtgtcgacaaggcagccacgtgtacaaggactaaattgatggaaa 8609709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 92 - 259
Target Start/End: Complemental strand, 13108424 - 13108258
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||||| |  |||| |||||||  |  |||||||||||||||||||||||||||||||| | |||||||| || |||  || | || |    
T  13108424 aattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagcttcgttagtggtgatgacgtgtc-cctt 13108326  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||| ||||||||||| || ||||||||| |||| || |||||||||||||||||||||||||||||    
T  13108325 gcatgctgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 13108258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 92 - 259
Target Start/End: Original strand, 38547284 - 38547450
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||||| |  |||| |||||||  |  ||||||||||||||||||||||| |||||||| |||||||||| || |||  || | || |    
T  38547284 aattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaaatggtccctccatccaaaagctccgttagtggtgatgacgtgtc-cctt 38547382  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||| ||||||||||| || ||||||||| |||| || |||||||||||||||||||||||||||||    
T  38547383 gcatgctgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 38547450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 93 - 259
Target Start/End: Complemental strand, 13486186 - 13486020
Alignment:
Q  93 attttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctg 192  Q
    ||||||||||||||| |||  |||| |||||||  |  |||||||||||||||||||||| ||||||||| ||| |||||  || |||  || |  | ||    
T  13486186 attttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctctgtccaaaagctccattagtagtgatgatgtgtcctcttg 13486087  T
Q  193 catgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    |||||||||||| | | || ||||||||| |||| ||||||||||||||||||||||||||||||||    
T  13486086 catgttgtgttgccctgtacacgtgtcaacaaggcagtcacgtgtacaaggactaaattgatggaaa 13486020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 131 - 259
Target Start/End: Complemental strand, 9673214 - 9673086
Alignment:
Q  131 acgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagt 230  Q
    |||||||||||||||||||||||||| ||||| | |||||||| || |||  || || | |||||||||||||||| | || ||||||||| |||| ||     
T  9673214 acgtccatcaaaatggtccctccgtctaaaagcttcgttagtggtgatgatgtgtcttcttgcatgttgtgttgtcatgtacacgtgtcaacaaggcagc 9673115  T
Q  231 cacgtgtacaaggactaaattgatggaaa 259  Q
    |||||||||||||||||| ||||||||||    
T  9673114 cacgtgtacaaggactaatttgatggaaa 9673086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 92 - 259
Target Start/End: Original strand, 5036501 - 5036672
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaa----aggtccgttagtgatgctgagctggct 187  Q
    ||||||| |||||||| |||  ||||||||||||  |  ||||| |||||||||||| |||||||||||    || || |||||||||| |||  || |     
T  5036501 aattttgtgaaatatctatttagtccttgaattttacagacgtctatcaaaatggtctctccgtccaaattaaagctctgttagtgatgatgatgtgtcc 5036600  T
Q  188 ccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
     | |||||||||||||||||| || ||||||||| |||| || |||||||||||||||||||||||||||||    
T  5036601 tcttgcatgttgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 5036672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 147
Target Start/End: Original strand, 5075366 - 5075479
Alignment:
Q  34 aagagtgaatcgtatacttcgtctttgaatttataattatcagtcaaaatcgtcttcaaattttgcgaaatatcaattgcgtccttgaatttctcttacg 133  Q
    ||||||||||| |  |||||||| ||||||||  ||  ||||| ||||||||||  ||||||||||||||||||||||  |||||||||||||||| |||    
T  5075366 aagagtgaatcatcaacttcgtccttgaatttgcaagcatcagccaaaatcgtccccaaattttgcgaaatatcaattttgtccttgaatttctctcacg 5075465  T
Q  134 tccatcaaaatggt 147  Q
    ||||||||||||||    
T  5075466 tccatcaaaatggt 5075479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 51 - 259
Target Start/End: Complemental strand, 7745241 - 7745033
Alignment:
Q  51 ttcgtctttgaatttataattatcagtcaaaatcgtcttcaaattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccc 150  Q
    |||||||||||||||  ||  ||||| |||| ||||||   |||||||||||||||  |||  |||| || ||||  |  || |||||||||||||||||    
T  7745241 ttcgtctttgaattttcaaaaatcagccaaattcgtctctgaattttgcgaaatatttatttagtccctgtattttacagacatccatcaaaatggtccc 7745142  T
Q  151 tccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaat 250  Q
    ||| |||||||| |||||||||| || |||  || |  | |||||| ||||||||||| || ||||||||| |||| |||||  |||||||||||||| |    
T  7745141 tccatccaaaagctccgttagtggtgatgatgtgtcctcttgcatgatgtgttgtcttgtacacgtgtcaacaaggcagtcatatgtacaaggactaatt 7745042  T
Q  251 tgatggaaa 259  Q
    |||||||||    
T  7745041 tgatggaaa 7745033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 92 - 259
Target Start/End: Complemental strand, 41825732 - 41825565
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||| |||  |||| |||||||  |  |||||||||||||||||| ||||||||||||| || ||||||  || |||  || || | |    
T  41825732 aattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcactccgtccaaaagctctgttagtagtgatgatgtgtcttctt 41825633  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||| ||||||||| | || || |||||| |||| ||||||||||||||||||||| ||||| ||||    
T  41825632 gcatgctgtgttgtcctgtacacatgtcaacaaggcagtcacgtgtacaaggactaatttgatagaaa 41825565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 100 - 254
Target Start/End: Complemental strand, 42897834 - 42897680
Alignment:
Q  100 gaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttg 199  Q
    |||||||||| |  |||||||||||| ||  ||||||||||||| |||||||||||||||  | || |||||  ||||||| ||| |  |||||||| ||    
T  42897834 gaaatatcaacttagtccttgaatttgtcagacgtccatcaaaaaggtccctccgtccaagtgctctgttagccatgctgatctgtcgtcctgcatgctg 42897735  T
Q  200 tgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgat 254  Q
    ||||||||| || ||||| ||| ||||||| ||||||| |||||||||| |||||    
T  42897734 tgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 42897680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 98 - 259
Target Start/End: Original strand, 9184445 - 9184606
Alignment:
Q  98 gcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgt 197  Q
    |||||||||||| |  |||| ||||||| ||  ||||| ||| |||||||||||||||||||| | | | |||||| |||||| ||| | |||||||||     
T  9184445 gcgaaatatcaaattagtccctgaatttgtcagacgtcgatcgaaatggtccctccgtccaaatgcttcattagtgctgctgatctgtcgccctgcatga 9184544  T
Q  198 tgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||||||||| || | ||||||| ||||||  ||||||||||| ||| || ||||||||||    
T  9184545 tgtgttgtcttgtacatgtgtcaacaaggaatccacgtgtacaaagaccaatttgatggaaa 9184606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 91 - 259
Target Start/End: Complemental strand, 26242403 - 26242235
Alignment:
Q  91 aaattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccc 190  Q
    ||||||||||||||||| |||  |||  |||||||  |  |||||||||||||||||||||||||||||||| ||||||||||  | |||  || |  |     
T  26242403 aaattttgcgaaatatctatttagtctctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggcgatgatgtgtcctct 26242304  T
Q  191 tgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    |||||||||||||||||| || ||||||||| |||| |  || ||||||||  ||||| ||||||||||    
T  26242303 tgcatgttgtgttgtcttgtacacgtgtcaacaaggcaaccatgtgtacaataactaatttgatggaaa 26242235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 132 - 259
Target Start/End: Complemental strand, 41042632 - 41042505
Alignment:
Q  132 cgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtc 231  Q
    ||||||||||||||||||||||||||||||| |||||||||| || |||  || |  | |||||| ||||||||| |  | | ||||||| |||| || |    
T  41042632 cgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgtgtcctcttgcatgctgtgttgtcctgcacatgtgtcaacaaggcagcc 41042533  T
Q  232 acgtgtacaaggactaaattgatggaaa 259  Q
    ||| ||||||||||||||||||||||||    
T  41042532 acgggtacaaggactaaattgatggaaa 41042505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 92 - 254
Target Start/End: Complemental strand, 37526091 - 37525929
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||| ||||||||||||| |  |||| ||||||| ||  || |||||||||| |||||||||||||||  |  | |||||| ||| ||| ||| |  |||    
T  37526091 aattatgcgaaatatcaacttagtccctgaatttttcagacatccatcaaaaaggtccctccgtccaagtgcgctgttagtcatgttgatctgtcgtcct 37525992  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgat 254  Q
    | |||||||||||||||||| ||||| ||| ||||||| ||||||| |||||||||| |||||    
T  37525991 gtatgttgtgttgtcttatacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 37525929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 259
Target Start/End: Original strand, 27691210 - 27691377
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||||| |  |||| |||||||  |  ||||||||||||   ||||||||||||||||||||||| | |  || |||  ||||| | |    
T  27691210 aattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaatccgtccctccgtccaaaaggtccgtcaatagtgatgatgtggcttctt 27691309  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||| | ||||||| | || ||||||||  |||  || |||||||||||||||||||||||||||||    
T  27691310 gcatgctttgttgtcctgtacacgtgtcagcaagtcagccacgtgtacaaggactaaattgatggaaa 27691377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 133 - 259
Target Start/End: Original strand, 42941871 - 42941997
Alignment:
Q  133 gtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtca 232  Q
    |||||||||||| ||||||||||||||||  ||||||||||  | |||  || |  | ||||||||||||||||   || ||||||||| |||| || ||    
T  42941871 gtccatcaaaatagtccctccgtccaaaatctccgttagtggagatgatgtgtcctcttgcatgttgtgttgtcaggtacacgtgtcaacaaggcagcca 42941970  T
Q  233 cgtgtacaaggactaaattgatggaaa 259  Q
    | |||||||||||||||||||||||||    
T  42941971 catgtacaaggactaaattgatggaaa 42941997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 92 - 173
Target Start/End: Original strand, 13282534 - 13282615
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtg 173  Q
    |||||||||||||||| |||  |||| |||||||  |  |||||||||||||||||||||||||||||||| ||||||||||    
T  13282534 aattttgcgaaatatctatttagtccctgaattttacaaacgtccatcaaaatggtccctccgtccaaaagctccgttagtg 13282615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 92 - 247
Target Start/End: Original strand, 22272392 - 22272547
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    ||||||||| |||||| |||  |||| |||||||  |  |||||||||||||| |||||||| |||||||| |||||||||| || |||  ||    | |    
T  22272392 aattttgcgtaatatctatttagtccctgaattttacaaacgtccatcaaaatagtccctccatccaaaagctccgttagtggtgatgatgtgttctctt 22272491  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggacta 247  Q
    ||||||||||||||| | || | ||||||| |||| || |||||||||||||||||    
T  22272492 gcatgttgtgttgtcatgtacatgtgtcaacaaggcagccacgtgtacaaggacta 22272547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 117 - 254
Target Start/End: Original strand, 8654580 - 8654717
Alignment:
Q  117 cttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgt 216  Q
    ||||||||| ||  ||||||||||||| |||||||||||||||  | ||||||||  |||||||  || | |||||||||   ||||||||| || ||||    
T  8654580 cttgaatttatcagacgtccatcaaaagggtccctccgtccaagtgctccgttagccatgctgacatgtcgccctgcatgcaatgttgtcttgtacacgt 8654679  T
Q  217 gtcaaaaaggaagtcacgtgtacaaggactaaattgat 254  Q
    | ||| ||||||| ||| ||| |||||||||| |||||    
T  8654680 ggcaagaaggaagccacatgttcaaggactaatttgat 8654717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 270
Target Start/End: Original strand, 11788384 - 11788555
Alignment:
Q  99 cgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgtt 198  Q
    ||||||||||| |  ||||| ||||||  |  |||||||||||| |  ||||||||||||| |  || ||||||||||||||| || || | || |||||    
T  11788384 cgaaatatcaaatttgtcctcgaatttaacagacgtccatcaaattcatccctccgtccaatatctctgttagtgatgctgaggtgtcttcttgtatgtt 11788483  T
Q  199 gtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaacacaaaaaatt 270  Q
    ||||||| || || |||||||| | ||  || || |||||||||||| || ||||||||||| ||| |||||    
T  11788484 gtgttgttttgtacacgtgtcatatagtcagccatgtgtacaaggaccaatttgatggaaacgcaacaaatt 11788555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 92 - 254
Target Start/End: Complemental strand, 462438 - 462278
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||| ||||||||||||| |  |||||||||||| ||  ||||||||||||| | ||||||| |||||  | || |||||  |||||||  || | || |    
T  462438 aattatgcgaaatatcaacttagtccttgaatttgtcaaacgtccatcaaaaagatccctccatccaagtgctctgttagccatgctgatttgtcgccgt 462339  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgat 254  Q
    |||||||||||| ||||||| ||||| ||| ||||||| || |||| |||||||||| |||||    
T  462338 gcatgttgtgttatcttatacacgtggcaagaaggaag-ca-gtgttcaaggactaatttgat 462278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 133 - 259
Target Start/End: Complemental strand, 40339727 - 40339601
Alignment:
Q  133 gtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtca 232  Q
    ||||||||||||||||||| | |||||||| |||||||||  || |||  |  |    |||||||||||||||| | || || |||||| |||| || ||    
T  40339727 gtccatcaaaatggtcccttcatccaaaagctccgttagtagtgatgatgtatccttttgcatgttgtgttgtcatgtacacctgtcaacaaggcagcca 40339628  T
Q  233 cgtgtacaaggactaaattgatggaaa 259  Q
    |||||||||||||||||| ||||||||    
T  40339627 cgtgtacaaggactaaatggatggaaa 40339601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 258
Target Start/End: Complemental strand, 38882860 - 38882699
Alignment:
Q  97 tgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatg 196  Q
    ||||| |||||||||   ||| ||||||| ||  |||||||| ||||  ||||||||||||||  | ||||||||  ||| ||| ||| |  ||||||||    
T  38882860 tgcgagatatcaatttaatccctgaatttgtcagacgtccataaaaaatgtccctccgtccaagtgctccgttagccatgttgatctgtcgtcctgcatg 38882761  T
Q  197 ttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaa 258  Q
     ||||||||||| ||  |||| ||| ||||||||||||||| ||||||| || || ||||||    
T  38882760 ctgtgttgtcttgtactcgtggcaacaaggaagtcacgtgttcaaggaccaatttaatggaa 38882699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 195 - 259
Target Start/End: Complemental strand, 28433702 - 28433638
Alignment:
Q  195 tgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    |||||||||| ||| || |||||  |||||||||| |||||||||| ||||||||||||||||||    
T  28433702 tgttgtgttggcttgtacacgtgggaaaaaggaagccacgtgtacatggactaaattgatggaaa 28433638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 174 - 254
Target Start/End: Complemental strand, 33160134 - 33160054
Alignment:
Q  174 atgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgat 254  Q
    ||||||| ||| | |||||||||||||||||||||||| ||||| ||| ||| |  |||||||| |||||||||| |||||    
T  33160134 atgctgatctgtcgccctgcatgttgtgttgtcttatacacgtggcaagaagaagctcacgtgttcaaggactaatttgat 33160054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 259
Target Start/End: Complemental strand, 33708892 - 33708725
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    ||||||||||||||| || |  |||| |||||||  |  ||||||||||||   ||||||||||||||||||||||||| |  || |||  ||||| | |    
T  33708892 aattttgcgaaatattaaattagtccctgaattttacaaacgtccatcaaatctgtccctccgtccaaaaggtccgttaatagtgatgatgtggcttctt 33708793  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||| | ||||||| |  | ||| ||||  |||  |  |||||||||||||||||||||||||||||    
T  33708792 gcatgctttgttgtcatgcacacgcgtcagcaagtcaaccacgtgtacaaggactaaattgatggaaa 33708725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 260
Target Start/End: Complemental strand, 15145791 - 15145662
Alignment:
Q  131 acgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagt 230  Q
    ||||| |||||||| |||| |||||||||| | || ||||||| || |||| || || ||| ||||   ||||||||| || ||||||| | |||||||     
T  15145791 acgtcgatcaaaatagtccttccgtccaaatgctctgttagtgctgttgagttgtcttcctacatggcttgttgtcttgtacacgtgtcgacaaggaagc 15145692  T
Q  231 cacgtgtacaaggactaaattgatggaaac 260  Q
    ||| ||||||||||| || ||||| |||||    
T  15145691 cacatgtacaaggaccaatttgattgaaac 15145662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 191 - 270
Target Start/End: Original strand, 6164658 - 6164737
Alignment:
Q  191 tgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaacacaaaaaatt 270  Q
    ||||||| ||||| |||| || ||||||||| ||| ||  ||||||||||||||| || ||||||||||| | |||||||    
T  6164658 tgcatgtcgtgttatcttgtacacgtgtcaataagaaaaccacgtgtacaaggaccaatttgatggaaacgctaaaaatt 6164737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 40020681 - 40020622
Alignment:
Q  114 gtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtg 173  Q
    |||| ||||||| | | |||||||||||  | ||||||||||||||||||||||||||||    
T  40020681 gtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagtg 40020622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 111
Target Start/End: Original strand, 15562437 - 15562499
Alignment:
Q  49 acttcgtctttgaatttataattatcagtcaaaatcgtcttcaaattttgcgaaatatcaatt 111  Q
    ||||||||||||||||| |||  |||||||||| ||||| | ||||||||  |||||||||||    
T  15562437 acttcgtctttgaatttttaaaaatcagtcaaattcgtccttaaattttgtaaaatatcaatt 15562499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 254
Target Start/End: Complemental strand, 33750452 - 33750290
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||| ||||||||||||| |  |||| ||||||| ||  || | |||||||| |||||||||||||||  | || ||||| |||| ||| ||| |  | |    
T  33750452 aattatgcgaaatatcaacttagtccctgaatttgtcagacattcatcaaaaaggtccctccgtccaagtgctctgttagcgatgttgatctgtcgtctt 33750353  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgat 254  Q
    ||||||||||||||||| ||  |||| ||| ||||||| || |||| || |||| || |||||    
T  33750352 gcatgttgtgttgtcttgtacgcgtggcaagaaggaagccatgtgttcagggacgaatttgat 33750290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 125
Target Start/End: Complemental strand, 44620761 - 44620671
Alignment:
Q  35 agagtgaatcgtatacttcgtctttgaatttataattatcagtcaaaatcgtcttcaaattttgcgaaatatcaattgcgtccttgaattt 125  Q
    |||||||||| |  ||||||||  |||||||  ||  ||| ||||||||||||  |||||||||| ||||||||||| ||||| |||||||    
T  44620761 agagtgaatcatcaacttcgtccctgaatttgcaagcatcggtcaaaatcgtccccaaattttgcaaaatatcaatttcgtccctgaattt 44620671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 239
Target Start/End: Complemental strand, 11722778 - 11722730
Alignment:
Q  191 tgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtac 239  Q
    ||||||||||||||| || || ||||||||| ||||||| |||||||||    
T  11722778 tgcatgttgtgttgtgttgtacacgtgtcaacaaggaagccacgtgtac 11722730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 1e-29; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 49 - 259
Target Start/End: Complemental strand, 14338586 - 14338376
Alignment:
Q  49 acttcgtctttgaatttataattatcagtcaaaatcgtcttcaaattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtc 148  Q
    |||||||| |||||||| |||  ||||| |||| ||||| |||||||||||||||| || | | | ||| |||||||| |  ||||||||||||||||||    
T  14338586 acttcgtccttgaatttttaaaaatcagccaaattcgtcctcaaattttgcgaaatgtctaattcatccctgaatttcacagacgtccatcaaaatggtc 14338487  T
Q  149 cctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaa 248  Q
    ||||||| |||||| ||||||| ||||| |||  |  |    |||||| ||||||||| | || ||||||||| ||||||| ||||||||||||||| ||    
T  14338486 cctccgttcaaaagctccgttactgatgatgatgtatcctgttgcatgatgtgttgtcctgtacacgtgtcaacaaggaagccacgtgtacaaggaccaa 14338387  T
Q  249 attgatggaaa 259  Q
     ||||||||||    
T  14338386 tttgatggaaa 14338376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 92 - 255
Target Start/End: Original strand, 20523422 - 20523585
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||| |||  |||| |||||||  |  |||||||||||||||||||||||||||||||| || ||||||| || |||  || || | |    
T  20523422 aattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagttctgttagtggtgatgatgtgtcttctt 20523521  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatg 255  Q
    |||||  |||||||| | || ||||||||| |||| || |||||||||||||||||||||||||    
T  20523522 gcatgccgtgttgtcctgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatg 20523585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 92 - 259
Target Start/End: Original strand, 9398716 - 9398883
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||| |||  |||| |||||||     |||| ||||||||||||||||||||||||||| |||||||||| || |||  || |    |    
T  9398716 aattttgcgaaatatctatttagtccctgaattttatagacgttcatcaaaatggtccctccgtccaaaagttccgttagtggtgatgatgtgtcatttt 9398815  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||||||||||||| | || ||||||||| |||  || |||||||||||||||||||||||||||||    
T  9398816 gcatgttgtgttgtcctgtacacgtgtcaacaagacagccacgtgtacaaggactaaattgatggaaa 9398883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 92 - 259
Target Start/End: Complemental strand, 13613650 - 13613483
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||||| |  |||| |||||||  |  |||||||||||| | ||||||||||||||||||||| |||||| || |||  ||||| | |    
T  13613650 aattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaattagtccctccgtccaaaaggtccattagtggtgatgatgtggcttctt 13613551  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
     |||| ||||||||| |||| ||||||||  |||  || || ||||||||||||||||||||||||||    
T  13613550 tcatgctgtgttgtcctatacacgtgtcagcaagtcagccatgtgtacaaggactaaattgatggaaa 13613483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 131 - 259
Target Start/End: Original strand, 7049852 - 7049980
Alignment:
Q  131 acgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagt 230  Q
    |||||||||||||||||||||||||||||||| |||||| ||| || |||  || |  | |||||||||||||||| | || ||||||||| |||| |      
T  7049852 acgtccatcaaaatggtccctccgtccaaaagctccgttcgtggtgatgatgtgtcctcttgcatgttgtgttgtcatgtacacgtgtcaacaaggcatc 7049951  T
Q  231 cacgtgtacaaggactaaattgatggaaa 259  Q
    |||||||||||||||||| ||||||||||    
T  7049952 cacgtgtacaaggactaatttgatggaaa 7049980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 72 - 259
Target Start/End: Original strand, 6899521 - 6899708
Alignment:
Q  72 atcagtcaaaatcgtcttcaaattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttag 171  Q
    |||||||||| ||||||  |||||||| |||||||| |||  |||| | |||||  |  || |||||||||||||||||| |||||||||| ||||||||    
T  6899521 atcagtcaaattcgtctctaaattttgtgaaatatctatttagtccctaaattttacagacatccatcaaaatggtcccttcgtccaaaagctccgttag 6899620  T
Q  172 tgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    || || |||  || |  | ||||||||||||| || | || ||||||||| |||| |  |||||||||||||||||| ||||||||||    
T  6899621 tgttgatgatgtgtcctcttgcatgttgtgttatcatgtacacgtgtcaacaaggcaaccacgtgtacaaggactaatttgatggaaa 6899708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 51 - 259
Target Start/End: Original strand, 10568414 - 10568622
Alignment:
Q  51 ttcgtctttgaatttataattatcagtcaaaatcgtcttcaaattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccc 150  Q
    |||||| ||||||||  ||  |||||||||| ||||| |  ||||| |||||||||  |||  |||| |||||||  |  ||||| |||||||| |||||    
T  10568414 ttcgtccttgaattttcaaaaatcagtcaaattcgtccttgaatttagcgaaatatttatttagtccctgaattttacagacgtctatcaaaatagtccc 10568513  T
Q  151 tccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaat 250  Q
    |||||||||||| |||||||||| || |||  || |    |||||||||||||||| | || ||||||||| |||| || ||| |||||||||||||| |    
T  10568514 tccgtccaaaagctccgttagtggtgatgatgtgtccttttgcatgttgtgttgtcatgtacacgtgtcaacaaggcagccacatgtacaaggactaatt 10568613  T
Q  251 tgatggaaa 259  Q
    |||||||||    
T  10568614 tgatggaaa 10568622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 259
Target Start/End: Original strand, 11355325 - 11355445
Alignment:
Q  139 caaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgta 238  Q
    |||||||||||||||||||||||| |||| ||||| || |||  || |  | |||||||||||||||| | || ||||||||| |||| || ||||||||    
T  11355325 caaaatggtccctccgtccaaaagctccggtagtggtgatgacgtgtcctcttgcatgttgtgttgtcatgtacacgtgtcaacaaggcagccacgtgta 11355424  T
Q  239 caaggactaaattgatggaaa 259  Q
    |||||||||| ||||||||||    
T  11355425 caaggactaatttgatggaaa 11355445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 92 - 240
Target Start/End: Complemental strand, 32439159 - 32439012
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||| |||  |||| |||||||  |  |||||||||||||||||||||||||||||||| || ||||||  || |||  || | || |    
T  32439159 aattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagatctgttagtagtgatgacgtgtc-cctt 32439061  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtaca 240  Q
    ||||| ||||||||||| || ||||||||| |||| || ||||||||||    
T  32439060 gcatgatgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtaca 32439012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 116 - 259
Target Start/End: Original strand, 32516957 - 32517100
Alignment:
Q  116 ccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacg 215  Q
    ||||||||||  | ||||||||||||||| ||||||||||||||||| |||||||||| || |||  ||    | |||||| |||| |||| | || |||    
T  32516957 ccttgaattttacatacgtccatcaaaattgtccctccgtccaaaagctccgttagtggtgatgacgtgttctcttgcatgatgtgctgtcatgtacacg 32517056  T
Q  216 tgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||| || |||| || |||||||| ||||||||||||||||||||    
T  32517057 tgttaacaaggcagccacgtgtataaggactaaattgatggaaa 32517100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 131 - 271
Target Start/End: Complemental strand, 25172138 - 25171998
Alignment:
Q  131 acgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagt 230  Q
    |||||||| ||||| |||| |||||||||| | ||| |||||  || |||| ||    |||||||||  ||||||||| || ||||||||| ||||||||    
T  25172138 acgtccataaaaatagtccttccgtccaaatgctccattagtattgttgagttgttgtcctgcatgtcatgttgtcttgtacacgtgtcaacaaggaagt 25172039  T
Q  231 cacgtgtacaaggactaaattgatggaaacacaaaaaattc 271  Q
    ||| ||||||||||| || |||||| |||| | ||||||||    
T  25172038 cacatgtacaaggaccaatttgatgaaaacgctaaaaattc 25171998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 193 - 259
Target Start/End: Original strand, 24662615 - 24662681
Alignment:
Q  193 catgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    |||||||||||||||| || ||||||||| ||||||| ||||||||||||| | || ||||||||||    
T  24662615 catgttgtgttgtcttgtacacgtgtcaacaaggaagacacgtgtacaagggccaatttgatggaaa 24662681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 132 - 173
Target Start/End: Complemental strand, 7372986 - 7372945
Alignment:
Q  132 cgtccatcaaaatggtccctccgtccaaaaggtccgttagtg 173  Q
    ||||||||||||||||||||||||||||||| ||| ||||||    
T  7372986 cgtccatcaaaatggtccctccgtccaaaagctccattagtg 7372945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 17952088 - 17952029
Alignment:
Q  114 gtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtg 173  Q
    |||| ||||||| | | |||||||||||  | ||||||||||||||||||||||||||||    
T  17952088 gtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagtg 17952029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 188 - 259
Target Start/End: Original strand, 30891276 - 30891347
Alignment:
Q  188 ccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    |||||||||| || ||||||| || ||||||||| ||  ||| ||||||||||||||| || ||||||||||    
T  30891276 ccctgcatgtagtcttgtcttgtacacgtgtcaacaaacaagccacgtgtacaaggaccaatttgatggaaa 30891347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 173
Target Start/End: Original strand, 34343930 - 34343972
Alignment:
Q  131 acgtccatcaaaatggtccctccgtccaaaaggtccgttagtg 173  Q
    |||||||||||  | ||||||||||||||||||||||||||||    
T  34343930 acgtccatcaatttcgtccctccgtccaaaaggtccgttagtg 34343972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 259
Target Start/End: Complemental strand, 17952025 - 17951964
Alignment:
Q  198 tgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||||| ||| || |||||  |||||| ||| |||||||||| ||||||||||||||||||    
T  17952025 tgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 17951964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 259
Target Start/End: Complemental strand, 35175846 - 35175785
Alignment:
Q  198 tgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||||| ||| || |||||  |||||| ||| |||||||||| ||||||||||||||||||    
T  35175846 tgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 35175785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 1e-28; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 91 - 259
Target Start/End: Complemental strand, 41761815 - 41761647
Alignment:
Q  91 aaattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccc 190  Q
    ||||||||||||||||| |||  |||| |||||||  |  |||||||||||||||||||||||||||||||| | |||||||| || |||  || |  |     
T  41761815 aaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaaagcttcgttagtggtgatgatgtgtcctct 41761716  T
Q  191 tgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    |||||| |||||| || | || ||||||||| |||| ||||||||||||||||||||||| ||||||||    
T  41761715 tgcatgctgtgttctcatgtacacgtgtcaacaaggcagtcacgtgtacaaggactaaatcgatggaaa 41761647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 92 - 259
Target Start/End: Original strand, 51011982 - 51012148
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||| |||  |||  |||||||  |  |||||||||||||||||||||||||||||||| || ||||||  || |||  || | || |    
T  51011982 aattttgcgaaatatctatttagtctctgaattttacagacgtccatcaaaatggtccctccgtccaaaagctctgttagtagtgatgacgtgtc-cctt 51012080  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||| ||||||||||| || ||||||||| |||| || |||||||||||||||||||||||||||||    
T  51012081 gcatgatgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 51012148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 136 - 257
Target Start/End: Original strand, 4519476 - 4519597
Alignment:
Q  136 catcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgt 235  Q
    |||||||| |||||||||||||||| | ||||||||  ||||||| ||| | ||||||||| ||||||||||| || ||||| ||||||| |||||||||    
T  4519476 catcaaaaaggtccctccgtccaaatgctccgttagccatgctgatctgtcgccctgcatgctgtgttgtcttgtacacgtggcaaaaagaaagtcacgt 4519575  T
Q  236 gtacaaggactaaattgatgga 257  Q
    || |||||||||| ||||||||    
T  4519576 gttcaaggactaatttgatgga 4519597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 131 - 259
Target Start/End: Original strand, 42980730 - 42980858
Alignment:
Q  131 acgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagt 230  Q
    |||||||||||||||||||||||||||||||| || ||||||| || |||  || |  | |||||||||||||||| | || ||||||||| |||  |||    
T  42980730 acgtccatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgtgtcctcttgcatgttgtgttgtcctgtacacgtgtcaacaagacagt 42980829  T
Q  231 cacgtgtacaaggactaaattgatggaaa 259  Q
    ||||||||||| |||||||||||||||||    
T  42980830 cacgtgtacaaagactaaattgatggaaa 42980858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 92 - 259
Target Start/End: Original strand, 49523180 - 49523347
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||| |||  |||| |||||||  |  |||| ||||||||||||||||||||||||||  |||||||||| || |||  || || | |    
T  49523180 aattttgcgaaatatctatttagtccctgaattttacagacgttcatcaaaatggtccctccgtccaaaaaatccgttagtggtgatgatgtgccttctt 49523279  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||||||||||||||| || ||||||||| |||  |  | ||||||||| |||||||||||||||||    
T  49523280 gcatgttgtgttgtcttgtacacgtgtcaacaagacaaccgcgtgtacaaagactaaattgatggaaa 49523347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 92 - 254
Target Start/End: Original strand, 35996119 - 35996281
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||| ||| |||||||||||   ||| ||||||| ||  ||||||||||||| |||||||||||||||  | ||||||||  |||||||  || | || |    
T  35996119 aattgtgcaaaatatcaatttaatccctgaatttatcagacgtccatcaaaaaggtccctccgtccaagtgctccgttagccatgctgacatgtcgccat 35996218  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgat 254  Q
    ||||||||||||||||| || ||||| ||| ||||||| ||||||| |||||||||| |||||    
T  35996219 gcatgttgtgttgtcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 35996281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 91 - 259
Target Start/End: Complemental strand, 2693321 - 2693154
Alignment:
Q  91 aaattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccc 190  Q
    ||||||||||||||||| |||  ||| |||||||| |   | ||||||||||||||||| |||||||| ||| ||| ||||||||| |||  || |  |     
T  2693321 aaattttgcgaaatatctatttagtctttgaattt-taaaatgtccatcaaaatggtccatccgtccataagttccattagtgatgatgatgtgtcatct 2693223  T
Q  191 tgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    |||||| ||||||||| | || ||||||||| |||| || |||||||||||||||||| ||||||||||    
T  2693222 tgcatgctgtgttgtcctgtacacgtgtcaagaaggcagccacgtgtacaaggactaatttgatggaaa 2693154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 131 - 259
Target Start/End: Original strand, 11601765 - 11601893
Alignment:
Q  131 acgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagt 230  Q
    |||||||||||||| ||||||| ||||| ||| | |||||||||||||||  || |  | ||| |||||||||||| | || ||||||||| |||| | |    
T  11601765 acgtccatcaaaatagtccctctgtccacaagcttcgttagtgatgctgatgtgtcctcttgcgtgttgtgttgtcatgtacacgtgtcaagaaggcaat 11601864  T
Q  231 cacgtgtacaaggactaaattgatggaaa 259  Q
    |||||||| ||||||||| ||||||||||    
T  11601865 cacgtgtataaggactaatttgatggaaa 11601893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 131 - 259
Target Start/End: Original strand, 48813882 - 48814010
Alignment:
Q  131 acgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagt 230  Q
    ||||||||||||||||||||| |||||||||| || ||| ||| || |||  || |  | |||||||||||||||| | || | |||| || |||| ||     
T  48813882 acgtccatcaaaatggtcccttcgtccaaaagctctgttggtggtgatgatgtgtcctcttgcatgttgtgttgtcatgtacatgtgttaacaaggcagc 48813981  T
Q  231 cacgtgtacaaggactaaattgatggaaa 259  Q
    |||||||||||||||||||||||||||||    
T  48813982 cacgtgtacaaggactaaattgatggaaa 48814010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 270
Target Start/End: Original strand, 27382212 - 27382351
Alignment:
Q  131 acgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagt 230  Q
    |||||||||||||| |||  | |||||||| | || ||||||| |||||||||  |  |||||||||  || |||||| || ||||||||| ||| |||     
T  27382212 acgtccatcaaaatagtcatttcgtccaaatgttctgttagtgctgctgagctttcgtcctgcatgtcatggtgtcttgtacacgtgtcaacaagaaagc 27382311  T
Q  231 cacgtgtacaaggactaaattgatggaaacacaaaaaatt 270  Q
    |||||||||||||||||| ||||||||||| | |||||||    
T  27382312 cacgtgtacaaggactaatttgatggaaacgctaaaaatt 27382351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 259
Target Start/End: Complemental strand, 48646771 - 48646648
Alignment:
Q  136 catcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgt 235  Q
    |||||||||||||| |||||||||||| | |||||||| || |||  || |  | |||||||||||||||| | || ||||||||| |||| |  |||||    
T  48646771 catcaaaatggtccttccgtccaaaagcttcgttagtggtgatgatgtgtcctcttgcatgttgtgttgtcatttacacgtgtcaacaaggcaaccacgt 48646672  T
Q  236 gtacaaggactaaattgatggaaa 259  Q
    ||||||||||||| ||||||||||    
T  48646671 gtacaaggactaatttgatggaaa 48646648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 134 - 259
Target Start/End: Original strand, 41781637 - 41781762
Alignment:
Q  134 tccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcac 233  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||  || |  | |||||| ||||||||| | ||   ||||||| || | || ||     
T  41781637 tccatcaaaatggtccctccgtccaaaagctccgttagtgatgatgatgtgtcctcttgcatgatgtgttgtcatgtacgtgtgtcaacaaagcagccat 41781736  T
Q  234 gtgtacaaggactaaattgatggaaa 259  Q
    ||||||||| ||||||||||||||||    
T  41781737 gtgtacaagaactaaattgatggaaa 41781762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 131 - 260
Target Start/End: Original strand, 50131257 - 50131386
Alignment:
Q  131 acgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagt 230  Q
    |||||||||||||| |||  |||||||||| | |||  ||||| |||||||||  |  ||| |||||  ||||||||| || ||||||| | ||||||||    
T  50131257 acgtccatcaaaatagtcattccgtccaaatgctccagtagtgctgctgagctatcgtcctacatgtcatgttgtcttgtacacgtgtctacaaggaagt 50131356  T
Q  231 cacgtgtacaaggactaaattgatggaaac 260  Q
    |||||||||||||||||| |||||| ||||    
T  50131357 cacgtgtacaaggactaatttgatgaaaac 50131386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 259
Target Start/End: Complemental strand, 35404474 - 35404346
Alignment:
Q  131 acgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagt 230  Q
    ||||||| ||||||||||| |||||||||||| |||||||||| || |||  || |  | | |||||||||||||| | || | ||||||| |||  ||     
T  35404474 acgtccaacaaaatggtccatccgtccaaaagctccgttagtggtgatgacgtgtcctcttccatgttgtgttgtcatgtacatgtgtcaacaagacagc 35404375  T
Q  231 cacgtgtacaaggactaaattgatggaaa 259  Q
    ||||||||||| |||||||||||||||||    
T  35404374 cacgtgtacaatgactaaattgatggaaa 35404346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 193 - 259
Target Start/End: Complemental strand, 11255907 - 11255841
Alignment:
Q  193 catgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    |||| ||||||||||| || ||||||||| |||| || |||||||||||||||||||||||||||||    
T  11255907 catgctgtgttgtcttgtacacgtgtcaacaaggcagccacgtgtacaaggactaaattgatggaaa 11255841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 254
Target Start/End: Complemental strand, 51041955 - 51041837
Alignment:
Q  136 catcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgt 235  Q
    |||||||| ||||||||| |||||  | |  |||||  ||||||| ||| | |||||||||||||||||||||||| ||||| ||| ||||||| ||| |    
T  51041955 catcaaaaaggtccctccatccaagtgctttgttagccatgctgatctgtcgccctgcatgttgtgttgtcttatacacgtggcaagaaggaagccacat 51041856  T
Q  236 gtacaaggactaaattgat 254  Q
    || |||||||||| |||||    
T  51041855 gttcaaggactaatttgat 51041837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 259
Target Start/End: Original strand, 43519480 - 43519647
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||||| |  |||| |||||||  |  ||||||||||||   ||||||||||||||||||||| ||| |  || |||  ||||| | |    
T  43519480 aattttgcgaaatatcaaattagtccctgaattttacaaacgtccatcaaatccgtccctccgtccaaaaggtccattaatagtgatgatgtggcttctt 43519579  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||| | ||||||| |  | ||||||||  |||  || || ||||||||||||||||||||||||||    
T  43519580 gcatgctttgttgtcatgcacacgtgtcagcaagtcagccatgtgtacaaggactaaattgatggaaa 43519647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 100 - 254
Target Start/End: Original strand, 2827468 - 2827622
Alignment:
Q  100 gaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttg 199  Q
    |||||||||| |  |||||||||||| ||  ||||||||||||| |||||||||||||||    ||||||||   |||||| ||| |  | |||||| ||    
T  2827468 gaaatatcaacttagtccttgaatttgtcagacgtccatcaaaaaggtccctccgtccaagtcctccgttagccttgctgatctgtcgtcttgcatgatg 2827567  T
Q  200 tgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgat 254  Q
    ||||||||| ||  |||| ||| ||||||| ||||||| || ||||||| |||||    
T  2827568 tgttgtcttgtacgcgtggcaagaaggaagccacgtgttcagggactaatttgat 2827622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 259
Target Start/End: Original strand, 32652240 - 32652301
Alignment:
Q  198 tgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||||| |||||| |||||  |||||||||| |||||||||| ||||||||||||||||||    
T  32652240 tgtgttggcttatacacgtgggaaaaaggaagccacgtgtacatggactaaattgatggaaa 32652301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 269
Target Start/End: Complemental strand, 26296940 - 26296785
Alignment:
Q  114 gtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatata 213  Q
    |||| ||||||| ||  |||||||||||||| |||  ||| |||||| | || ||||||| || ||||||| |  | |||||||  ||||||||| || |    
T  26296940 gtccctgaatttgtcaaacgtccatcaaaatagtcattccatccaaatgatctgttagtgttgatgagctgtcgtcttgcatgtcatgttgtcttgtaca 26296841  T
Q  214 cgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaacacaaaaaat 269  Q
    |||||| | ||||||| ||||| ||||||||| || |||||| |||| | ||||||    
T  26296840 cgtgtctacaaggaagccacgtatacaaggaccaatttgatgaaaacgctaaaaat 26296785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 32652177 - 32652236
Alignment:
Q  114 gtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtg 173  Q
    |||||||||||| | | |||||||||||  | ||||||||||||||||||||||||||||    
T  32652177 gtccttgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagtg 32652236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 246
Target Start/End: Complemental strand, 44558561 - 44558407
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||| ||||||||||||| |  |||| ||||||| ||  ||||||||||||| ||||| |||||||||  | |  |||||  ||||||| ||| | || |    
T  44558561 aattatgcgaaatatcaacttagtccctgaatttgtcagacgtccatcaaaaaggtccttccgtccaagtgctatgttagccatgctgatctgtcaccat 44558462  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggact 246  Q
    ||||| | ||||||||| ||  |||| ||| ||||||| ||||||| ||||||||    
T  44558461 gcatgctctgttgtcttgtacgcgtggcaagaaggaagccacgtgttcaaggact 44558407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 86 - 159
Target Start/End: Original strand, 7149589 - 7149662
Alignment:
Q  86 tcttcaaattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaa 159  Q
    |||| ||||||||||||||||  ||| | |||||||||||  | || ||| |||||||||||||||||||||||    
T  7149589 tctttaaattttgcgaaatatttatttcatccttgaatttaacataggtcaatcaaaatggtccctccgtccaa 7149662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 39083777 - 39083841
Alignment:
Q  195 tgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    |||||||||| ||| || |||||  |||||| ||| |||||||||| ||||||||||||||||||    
T  39083777 tgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 39083841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 259
Target Start/End: Original strand, 39189520 - 39189584
Alignment:
Q  195 tgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    |||||||||| ||| || |||||  |||||| ||| |||||||||| ||||||||||||||||||    
T  39189520 tgttgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 39189584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 219
Target Start/End: Original strand, 44972506 - 44972594
Alignment:
Q  131 acgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtc 219  Q
    |||||||||||||| |||| |||||||||| | |||||||||| |||| ||||| |  ||| |||||  |||||||||  |||||||||    
T  44972506 acgtccatcaaaatagtccttccgtccaaatgctccgttagtgttgctcagctgtcgtcctacatgtcctgttgtcttgaatacgtgtc 44972594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 254
Target Start/End: Complemental strand, 2350575 - 2350410
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||| |||||||||||||||   ||  ||||||| ||  |||| |||||||| |||||||| ||||||  | ||||||||  |||||||  || | | ||    
T  2350575 aattatgcgaaatatcaatttaatctctgaatttatcagacgttcatcaaaaaggtccctctgtccaagtgctccgttagccatgctgacatgtcgctct 2350476  T
Q  192 gcatgttgtgttg---tcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgat 254  Q
    ||||| |||||||   |||| || ||||| ||| ||||||| ||||||| |||||||||| |||||    
T  2350475 gcatgctgtgttgtactcttgtacacgtggcaagaaggaagccacgtgttcaaggactaatttgat 2350410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 5484618 - 5484677
Alignment:
Q  114 gtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtg 173  Q
    |||| ||||||| | | |||||||||||  | ||||||||||||||||||||||||||||    
T  5484618 gtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagtg 5484677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 155
Target Start/End: Complemental strand, 10372774 - 10372711
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgt 155  Q
    |||| ||||||||||||||| | ||| ||||||| ||  ||||||||||||| |||||||||||    
T  10372774 aattatgcgaaatatcaatttcatccctgaatttgtcagacgtccatcaaaaaggtccctccgt 10372711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 39083717 - 39083776
Alignment:
Q  114 gtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtg 173  Q
    |||| ||||||| | | |||||||||||  | ||||||||||||||||||||||||||||    
T  39083717 gtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagtg 39083776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 173
Target Start/End: Original strand, 39921572 - 39921631
Alignment:
Q  114 gtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtg 173  Q
    |||| ||||||| | | |||||||||||  | ||||||||||||||||||||||||||||    
T  39921572 gtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagtg 39921631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 114 - 173
Target Start/End: Complemental strand, 43779913 - 43779854
Alignment:
Q  114 gtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtg 173  Q
    |||| ||||||| | | |||||||||||  | ||||||||||||||||||||||||||||    
T  43779913 gtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgttagtg 43779854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 160
Target Start/End: Complemental strand, 13451026 - 13450980
Alignment:
Q  114 gtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaa 160  Q
    |||||||||||| ||  ||||||||||||||||||||||| ||||||    
T  13451026 gtccttgaatttatcagacgtccatcaaaatggtccctccatccaaa 13450980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 259
Target Start/End: Original strand, 25993653 - 25993719
Alignment:
Q  193 catgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    |||| ||||||||||| || ||||||||| || |||| |||||||||| |||| || ||||||||||    
T  25993653 catgatgtgttgtcttgtacacgtgtcaacaatgaagccacgtgtacatggaccaatttgatggaaa 25993719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 259
Target Start/End: Original strand, 5484681 - 5484742
Alignment:
Q  198 tgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||||| ||| || |||||  |||||| ||| |||||||||| ||||||||||||||||||    
T  5484681 tgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 5484742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 259
Target Start/End: Complemental strand, 42880744 - 42880683
Alignment:
Q  198 tgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||||| ||| || |||||  |||||| ||| |||||||||| ||||||||||||||||||    
T  42880744 tgtgttgacttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 42880683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 259
Target Start/End: Complemental strand, 43779850 - 43779789
Alignment:
Q  198 tgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||||| ||| || |||||  |||||| ||| |||||||||| ||||||||||||||||||    
T  43779850 tgtgttggcttgtacacgtgggaaaaagaaagccacgtgtacagggactaaattgatggaaa 43779789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 259
Target Start/End: Complemental strand, 44994270 - 44994209
Alignment:
Q  198 tgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||||| ||| || |||||  |||||| |||||| ||||||| ||||||||||||||||||    
T  44994270 tgtgttggcttgtacacgtgggaaaaagaaagtcatgtgtacagggactaaattgatggaaa 44994209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 76 - 173
Target Start/End: Complemental strand, 52868233 - 52868136
Alignment:
Q  76 gtcaaaatcgtcttcaaattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtg 173  Q
    |||||| ||||||  ||||||||||||||||| |||  |||  |||||||  |  ||| | |||||||||||| || |||||||||| ||||||||||    
T  52868233 gtcaaattcgtctataaattttgcgaaatatctatttagtctctgaatttaacagacgcctatcaaaatggtcacttcgtccaaaagctccgttagtg 52868136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 114 - 170
Target Start/End: Original strand, 39189460 - 39189516
Alignment:
Q  114 gtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgtta 170  Q
    |||| ||||||| | | |||||||||||  | |||||||||||||||||||||||||    
T  39189460 gtccctgaatttgtttgacgtccatcaatttcgtccctccgtccaaaaggtccgtta 39189516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 231 - 259
Target Start/End: Complemental strand, 52868097 - 52868069
Alignment:
Q  231 cacgtgtacaaggactaaattgatggaaa 259  Q
    |||||||||||||||||||||||||||||    
T  52868097 cacgtgtacaaggactaaattgatggaaa 52868069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1454 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 131 - 259
Target Start/End: Original strand, 1358 - 1485
Alignment:
Q  131 acgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagt 230  Q
    |||||||||||||||||||||||||||||||| |||||||||| || |||  |  | || |||||| ||||||||||| || ||||||||| |||| |      
T  1358 acgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgacgtatc-ccttgcatgctgtgttgtcttgtacacgtgtcaacaaggcaac 1456  T
Q  231 cacgtgtacaaggactaaattgatggaaa 259  Q
    |||||||||||||||||||||||||||||    
T  1457 cacgtgtacaaggactaaattgatggaaa 1485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 130 - 259
Target Start/End: Original strand, 8354 - 8483
Alignment:
Q  130 tacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaag 229  Q
    |||||||||||||||||| | |||||||||||| | |||||||| || |||  || |  | |||| | ||||||||||| || ||||||||| |||| ||    
T  8354 tacgtccatcaaaatggtacatccgtccaaaagcttcgttagtggtgatgacgtgtcctcttgcaagatgtgttgtcttgtacacgtgtcaacaaggcag 8453  T
Q  230 tcacgtgtacaaggactaaattgatggaaa 259  Q
     |||||||||||| ||||||||||||||||    
T  8454 ccacgtgtacaagtactaaattgatggaaa 8483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 270
Target Start/End: Original strand, 4554 - 4693
Alignment:
Q  131 acgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagt 230  Q
    |||||||||||||| |||| |||||||||| | || ||||||| ||||||| || |  ||||||||   ||||||||| || ||||||| | |||||||     
T  4554 acgtccatcaaaatagtccttccgtccaaatgttctgttagtgttgctgagttgtcgtcctgcatggcttgttgtcttgtacacgtgtctacaaggaagc 4653  T
Q  231 cacgtgtacaaggactaaattgatggaaacacaaaaaatt 270  Q
    ||||||||||||||| || ||||| ||||| || ||||||    
T  4654 cacgtgtacaaggaccaatttgattgaaacgcacaaaatt 4693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 259
Target Start/End: Original strand, 3350 - 3517
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||||| |  |||| |||||||  |  |||||||||||| | ||||||||||||||||||||||||| |  || |||  ||||| | |    
T  3350 aattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaattcgtccctccgtccaaaaggtccgttaatagtgatgatgtggcttctt 3449  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||| | ||||||| | || | ||||||  |||  || ||||||||||| |||||||||||||||||    
T  3450 gcatgctttgttgtcctgtacatgtgtcagcaagtcagccacgtgtacaaagactaaattgatggaaa 3517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 92 - 259
Target Start/End: Original strand, 4522 - 4689
Alignment:
Q  92 aattttgcgaaatatcaattgcgtccttgaatttctcttacgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccct 191  Q
    |||||||||||||||||| |  |||| |||||||  |  |||||||||||| | ||||||||||||||||||||||||| |  || |||  ||||| | |    
T  4522 aattttgcgaaatatcaaattagtccctgaattttacagacgtccatcaaattcgtccctccgtccaaaaggtccgttaatagtgatgatgtggcttctt 4621  T
Q  192 gcatgttgtgttgtcttatatacgtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaa 259  Q
    ||||| | ||||||| | || | ||||||  |||  || ||||||||||| |||||||||||||||||    
T  4622 gcatgctttgttgtcctgtacatgtgtcagcaagtcagccacgtgtacaaagactaaattgatggaaa 4689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 131 - 259
Target Start/End: Original strand, 37299 - 37427
Alignment:
Q  131 acgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagt 230  Q
    ||||| |||||||||||  |||| |||||||  ||||||| || || |||  || || | || ||||||||||||| | || ||||||||| |||| |      
T  37299 acgtctatcaaaatggtttctccatccaaaaactccgttaatggtgatgatatgtcttcttgtatgttgtgttgtcctttacacgtgtcaacaaggcaac 37398  T
Q  231 cacgtgtacaaggactaaattgatggaaa 259  Q
    |||||||||||||||||| ||||||||||    
T  37399 cacgtgtacaaggactaatttgatggaaa 37427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 131 - 260
Target Start/End: Complemental strand, 30500 - 30371
Alignment:
Q  131 acgtccatcaaaatggtccctccgtccaaaaggtccgttagtgatgctgagctggctccctgcatgttgtgttgtcttatatacgtgtcaaaaaggaagt 230  Q
    ||||| |||||||| || | |||||||||| | |||||||||| || | || || || ||||||||   ||||||||| || ||||||| | ||||||||    
T  30500 acgtcaatcaaaatagttcttccgtccaaatgctccgttagtgctgtttagttgtcttcctgcatggcttgttgtcttgtacacgtgtctacaaggaagt 30401  T
Q  231 cacgtgtacaaggactaaattgatggaaac 260  Q
    |||||||| || ||| || ||||| |||||    
T  30400 cacgtgtataatgaccaatttgattgaaac 30371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 270
Target Start/End: Complemental strand, 15938 - 15883
Alignment:
Q  215 gtgtcaaaaaggaagtcacgtgtacaaggactaaattgatggaaacacaaaaaatt 270  Q
    ||||||| ||||||||||||||||||||||| || |||||  |||||| |||||||    
T  15938 gtgtcaacaaggaagtcacgtgtacaaggaccaatttgatataaacactaaaaatt 15883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University