View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10289_high_13 (Length: 250)
Name: NF10289_high_13
Description: NF10289
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10289_high_13 |
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Alignment Details
Target: chr7 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 9 - 213
Target Start/End: Original strand, 48864779 - 48864987
Alignment:
| Q |
9 |
agcataggcctcacaaaagcaggaaggaaaaggcctacagaaaatttcacatagtaagtgaatagcatgttggtacaaaacacgactaaaaacatgtttc |
108 |
Q |
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| T |
48864779 |
agcataggcctcacaaaagcaggaaggaaaaggcctacagaaaatttcacatagtaagtgaatagcatgttggtacaaaacacgactaaaaacatgtttc |
48864878 |
T |
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| Q |
109 |
taaatttaatttcaagaagaatcatgaaacagt----ataaaatgattgtagagcacatgaatcaatcaaagaaaattgaagaataaaggtaatcatgtt |
204 |
Q |
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||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48864879 |
taaatttaatttcaagaagaatcatgaaacagtataaataaaatgattgtagagaacatgaatcaatcaaagaaaattgaagaataaaggtaatcatgtt |
48864978 |
T |
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| Q |
205 |
atcaggaat |
213 |
Q |
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||||||||| |
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| T |
48864979 |
atcaggaat |
48864987 |
T |
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