View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10289_low_13 (Length: 262)
Name: NF10289_low_13
Description: NF10289
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10289_low_13 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 9 - 262
Target Start/End: Original strand, 44150412 - 44150665
Alignment:
| Q |
9 |
gtgagatgaatgaagttttattttactaaggagaatgagaaaatatagatcgacctttcacatgcattgacaaaacaatttagttaatgatattctatta |
108 |
Q |
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| T |
44150412 |
gtgagatgaatgaagttttattttactaaggagaaagagaaaatatagatcgacctttcacatgcattgacaaaacaatttagttaatgatattctatta |
44150511 |
T |
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| Q |
109 |
ttattctatatatgaatacaaaataaattttgaaacgtgtgtggaaaacaagttgtgccctttcacaacaagaattaatgaagagtttttctttcacaac |
208 |
Q |
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| T |
44150512 |
ttattctatatatgaatacaaaataaattttgaaacgtgtgtggaaaacaagttgtgccctttaacaacaagaattaatgaagagtttttctttcacaac |
44150611 |
T |
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| Q |
209 |
acggggccagagctagctagctagacttttaacaaaggaagtaactgcaagatg |
262 |
Q |
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| T |
44150612 |
acggggccatagctagctagctagacttttaacgatggaagtaactgcaagatg |
44150665 |
T |
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