View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10289_low_17 (Length: 250)
Name: NF10289_low_17
Description: NF10289
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10289_low_17 |
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Alignment Details
Target: chr8 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 2449796 - 2449553
Alignment:
| Q |
1 |
ttttggaaccacacaactgcaagggtaacgagggatgcataaattgcattgggtaacttctgcaccacttttccaacgccagggacaccttcagtggctc |
100 |
Q |
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||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
2449796 |
ttttggaaccacacaactgcaagggtaacaagggatgcataaattgcattcggtaacttctgcaccacttttccaacaccagggacaccttcagtggctc |
2449697 |
T |
|
| Q |
101 |
tttttgttgccattgcaacactcggtgctacgaccaaagtgatgataagtttctgactaacaacagtgaatgtatcagctgtcattttctggatgaaatc |
200 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2449696 |
tttttgttgccattgcaacacttggtgctacgaccaaagtgatgataagtttctgactaacaacagtgaatgtatcagctgtcattttctggatgaaatc |
2449597 |
T |
|
| Q |
201 |
gcaaaattcgtcatgatcaattgccccatccaagttcatctcac |
244 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
2449596 |
gcaaaattcgtcatgatcaattgccccatccaagttcatatcac |
2449553 |
T |
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