View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10289_low_23 (Length: 236)
Name: NF10289_low_23
Description: NF10289
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10289_low_23 |
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Alignment Details
Target: chr1 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 26582613 - 26582834
Alignment:
| Q |
1 |
tagcttataactaatggattgtttgcataatcacagcttgacaaaaacctaagtctagggttcaaaaaatatagctagctagtactaagtacaaaggctc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
26582613 |
tagcttataactaatggattgtttgcataatcacagcttgacaaaaacctaagtctagggttaaaaaaatatagctagctagtactaagtacaaaggctc |
26582712 |
T |
|
| Q |
101 |
ctacagccacctgtagtagagtgatatatatggccgtaacagttgcaggggagggaattcttcatcggtacataaaccacaggtgactacgagtctacga |
200 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||| |
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| T |
26582713 |
ctacagccatctgtagtagagtgatatatatggccgtaacagttgcagtggagggaattcttcatcggtacataaaccagaggtgactacgaatctacga |
26582812 |
T |
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| Q |
201 |
ccacccgtattggggcactacg |
222 |
Q |
| |
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|||||||||||||||||||||| |
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| T |
26582813 |
ccacccgtattggggcactacg |
26582834 |
T |
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