View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1028_low_2 (Length: 354)
Name: NF1028_low_2
Description: NF1028
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1028_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 69 - 338
Target Start/End: Complemental strand, 35473081 - 35472812
Alignment:
| Q |
69 |
tcaaaactggagccttacagaaacaacgtgacagggtgttaaacaaattaaatgaattgtattttttcaggcatgcatgtccattaatttgggtaggaga |
168 |
Q |
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| T |
35473081 |
tcaaaactggagccttacggaaaccacgtgacagggtgttaaacaaattaaatgaattgtattttttcaggcatgcatgtccattaatttgggtaggaga |
35472982 |
T |
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| Q |
169 |
ggttattaaacctcaatgaatatatgtgagatgttacatggtgtggtactactcacaatcagagtcaacaaatagcagtgtaatgtgtctgtaaagaaca |
268 |
Q |
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| T |
35472981 |
gattattaaacctcaatgaatatatgtgagatgttacatggtgtggtactactcataatcagagtcaacaaatagcagtgtaatgtgtctgtcaagaaca |
35472882 |
T |
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| Q |
269 |
aaggaatccataaataagaatggaaacgtttcagaggacaggatcccgatagtgatatcttggtctggga |
338 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35472881 |
aaggaatccataaataagaatggaaacgtttcagaggacaggatcccgatagtgatatcttggtctggga |
35472812 |
T |
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