View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1029-Insertion-8 (Length: 245)
Name: NF1029-Insertion-8
Description: NF1029
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1029-Insertion-8 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 7 - 245
Target Start/End: Original strand, 4946744 - 4946982
Alignment:
| Q |
7 |
aatcataactatagctgaacttgaaatattaaagtgattcatcttagaatcctagttctcgaataatttttggccaaacattattttctggtcgaacttt |
106 |
Q |
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| T |
4946744 |
aatcataactatagctgaacttgaaatattaaagtgattcatcttagaatcctagctctcgaataatttttggccaaacattattttctggtcgaacttt |
4946843 |
T |
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| Q |
107 |
ggattatgatgtttactccgataaaatgaatttgcatatgtatagaagaagaaagcttactctttaactaattttgaacagggaatggaggatctcaatt |
206 |
Q |
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|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
4946844 |
ggattatgatgtttactcggataaaatgaatttgcatatgtatagaagaagaaagcttactctttaaataattttgaacagggaatggaggatctcaatt |
4946943 |
T |
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| Q |
207 |
tctttaaccaatacacgatggattctcttgcatctccaa |
245 |
Q |
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| T |
4946944 |
tctttaaccaatacacgatggattctcttgcatctccaa |
4946982 |
T |
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