View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1029-Insertion-9 (Length: 182)
Name: NF1029-Insertion-9
Description: NF1029
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1029-Insertion-9 |
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Alignment Details
Target: chr7 (Bit Score: 143; Significance: 2e-75; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 143; E-Value: 2e-75
Query Start/End: Original strand, 8 - 159
Target Start/End: Original strand, 48091235 - 48091388
Alignment:
| Q |
8 |
aatatctctgacacactata--tatatagcacctttcctcattcctctacttacagtcttcatatacattgctaattttaagttgaattaaatccatggc |
105 |
Q |
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| T |
48091235 |
aatatctctgacacactatatatatatagcacctttcctcattcctctacttacagtcttcatatacattgctaattttaagttgaattaaatccatggc |
48091334 |
T |
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| Q |
106 |
tgccactatggttttgcagtcttattacatcaatgtagtgatcatattgatggt |
159 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48091335 |
tgccactatggttttgcagtcttattacatcaatgtagtgatcatattgatggt |
48091388 |
T |
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