View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10290_high_17 (Length: 321)

Name: NF10290_high_17
Description: NF10290
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10290_high_17
NF10290_high_17
[»] chr5 (34 HSPs)
chr5 (17-202)||(24138390-24138577)
chr5 (197-321)||(28290072-28290196)
chr5 (18-191)||(19758674-19758844)
chr5 (206-318)||(18149736-18149848)
chr5 (206-321)||(8419049-8419163)
chr5 (206-313)||(15029745-15029852)
chr5 (206-321)||(19291359-19291475)
chr5 (207-321)||(38900648-38900762)
chr5 (206-313)||(38901076-38901183)
chr5 (195-314)||(27307053-27307172)
chr5 (201-321)||(28289682-28289802)
chr5 (206-318)||(4967200-4967314)
chr5 (193-293)||(21370676-21370776)
chr5 (206-319)||(15115525-15115635)
chr5 (205-319)||(4966818-4966932)
chr5 (205-280)||(14340400-14340475)
chr5 (206-321)||(21371124-21371239)
chr5 (206-321)||(39083362-39083478)
chr5 (205-321)||(14340835-14340954)
chr5 (229-321)||(18150151-18150244)
chr5 (193-317)||(20266346-20266471)
chr5 (206-317)||(10721789-10721900)
chr5 (206-310)||(16752585-16752689)
chr5 (206-313)||(32697659-32697769)
chr5 (243-320)||(5161622-5161700)
chr5 (206-317)||(22651348-22651459)
chr5 (228-321)||(5161996-5162090)
chr5 (228-317)||(13557017-13557106)
chr5 (200-317)||(41834490-41834608)
chr5 (206-293)||(22651767-22651854)
chr5 (228-317)||(32305843-32305932)
chr5 (206-317)||(28494847-28494958)
chr5 (266-317)||(17260389-17260441)
chr5 (206-302)||(27307507-27307603)
[»] chr3 (65 HSPs)
chr3 (201-321)||(44676900-44677020)
chr3 (200-321)||(49951543-49951664)
chr3 (201-321)||(49720789-49720909)
chr3 (206-321)||(43678298-43678413)
chr3 (207-321)||(329850-329964)
chr3 (196-321)||(51473283-51473409)
chr3 (206-321)||(38535312-38535427)
chr3 (193-317)||(50662844-50662968)
chr3 (207-321)||(55389609-55389723)
chr3 (206-318)||(14654202-14654314)
chr3 (206-321)||(41998232-41998348)
chr3 (206-321)||(47431699-47431815)
chr3 (206-321)||(51828385-51828501)
chr3 (201-321)||(16701217-16701340)
chr3 (209-321)||(34104644-34104756)
chr3 (206-321)||(32730817-32730932)
chr3 (206-321)||(51828968-51829083)
chr3 (203-321)||(40839080-40839198)
chr3 (206-302)||(2051298-2051394)
chr3 (206-321)||(46013850-46013966)
chr3 (206-321)||(52237245-52237360)
chr3 (195-321)||(330264-330390)
chr3 (202-319)||(16689357-16689474)
chr3 (202-319)||(40838651-40838768)
chr3 (201-321)||(51827955-51828075)
chr3 (200-321)||(51828536-51828658)
chr3 (200-321)||(2044268-2044389)
chr3 (205-321)||(22370598-22370715)
chr3 (200-321)||(46013419-46013540)
chr3 (206-314)||(52375766-52375874)
chr3 (206-321)||(52375330-52375445)
chr3 (206-319)||(52236819-52236932)
chr3 (195-321)||(25534882-25535009)
chr3 (206-321)||(38535723-38535838)
chr3 (199-317)||(41998660-41998778)
chr3 (206-321)||(49720374-49720489)
chr3 (206-321)||(49951974-49952089)
chr3 (206-321)||(40275096-40275213)
chr3 (193-321)||(14654619-14654745)
chr3 (206-314)||(36701530-36701639)
chr3 (206-319)||(40275524-40275636)
chr3 (206-321)||(30513725-30513840)
chr3 (202-321)||(32730388-32730507)
chr3 (206-321)||(44676475-44676590)
chr3 (206-317)||(55390029-55390140)
chr3 (200-321)||(34105076-34105199)
chr3 (206-320)||(43678713-43678827)
chr3 (201-314)||(39010073-39010186)
chr3 (228-317)||(43222415-43222504)
chr3 (202-313)||(27199701-27199813)
chr3 (227-315)||(39010456-39010543)
chr3 (201-321)||(51472853-51472973)
chr3 (206-315)||(43222823-43222933)
chr3 (206-314)||(49407799-49407907)
chr3 (206-317)||(50900959-50901070)
chr3 (201-302)||(36701104-36701206)
chr3 (206-317)||(55192121-55192232)
chr3 (206-314)||(27200126-27200234)
chr3 (206-317)||(37075689-37075803)
chr3 (206-317)||(49408212-49408324)
chr3 (230-313)||(8874120-8874205)
chr3 (205-278)||(8873693-8873765)
chr3 (206-294)||(33412609-33412697)
chr3 (229-317)||(50900558-50900647)
chr3 (206-314)||(37076109-37076217)
[»] chr7 (46 HSPs)
chr7 (206-321)||(16917716-16917831)
chr7 (205-321)||(25637626-25637742)
chr7 (193-321)||(7732915-7733043)
chr7 (206-321)||(9181535-9181650)
chr7 (205-321)||(5745641-5745757)
chr7 (206-321)||(15712368-15712483)
chr7 (198-321)||(786777-786901)
chr7 (206-321)||(48248019-48248135)
chr7 (200-320)||(16081296-16081416)
chr7 (199-321)||(11971330-11971456)
chr7 (206-321)||(14311715-14311830)
chr7 (202-313)||(26026754-26026865)
chr7 (206-320)||(28687596-28687710)
chr7 (206-321)||(7732491-7732606)
chr7 (206-321)||(27245632-27245747)
chr7 (206-300)||(26047960-26048054)
chr7 (206-319)||(5333883-5333996)
chr7 (201-321)||(16081727-16081847)
chr7 (206-315)||(5334253-5334362)
chr7 (204-320)||(28687928-28688043)
chr7 (204-321)||(26026318-26026436)
chr7 (206-321)||(27245206-27245322)
chr7 (206-321)||(39388695-39388811)
chr7 (206-321)||(9394158-9394272)
chr7 (201-319)||(2758128-2758246)
chr7 (209-321)||(35161229-35161342)
chr7 (206-321)||(25637200-25637316)
chr7 (202-301)||(787234-787333)
chr7 (201-321)||(9181837-9181960)
chr7 (206-321)||(26048375-26048489)
chr7 (203-294)||(35160653-35160746)
chr7 (201-313)||(34595208-34595320)
chr7 (204-320)||(11973831-11973947)
chr7 (206-321)||(24929731-24929851)
chr7 (193-321)||(48247577-48247709)
chr7 (201-321)||(5746067-5746188)
chr7 (203-268)||(40669689-40669754)
chr7 (201-314)||(45815342-45815454)
chr7 (197-317)||(49064028-49064148)
chr7 (194-291)||(39136991-39137088)
chr7 (206-317)||(4477705-4477816)
chr7 (206-317)||(9393739-9393850)
chr7 (206-321)||(14311318-14311434)
chr7 (206-317)||(39136689-39136800)
chr7 (206-314)||(35579320-35579428)
chr7 (206-317)||(35578902-35579013)
[»] chr2 (51 HSPs)
chr2 (195-321)||(38008379-38008505)
chr2 (194-321)||(20127727-20127855)
chr2 (199-321)||(11539633-11539756)
chr2 (195-313)||(5560043-5560161)
chr2 (202-321)||(13315492-13315614)
chr2 (195-321)||(4809307-4809433)
chr2 (206-311)||(4356194-4356299)
chr2 (177-321)||(43160438-43160583)
chr2 (206-321)||(33921039-33921155)
chr2 (206-321)||(62960-63075)
chr2 (202-321)||(15551102-15551222)
chr2 (206-321)||(42192243-42192358)
chr2 (200-321)||(6949448-6949570)
chr2 (206-321)||(4355758-4355873)
chr2 (201-321)||(16952933-16953055)
chr2 (201-321)||(17060904-17061026)
chr2 (199-321)||(44220073-44220195)
chr2 (207-321)||(16175777-16175892)
chr2 (206-321)||(44219647-44219762)
chr2 (196-320)||(9330223-9330348)
chr2 (195-319)||(42192672-42192797)
chr2 (201-313)||(649525-649637)
chr2 (206-321)||(20128165-20128280)
chr2 (206-321)||(33920615-33920730)
chr2 (195-317)||(31797209-31797331)
chr2 (206-314)||(11540073-11540181)
chr2 (206-321)||(38007953-38008069)
chr2 (206-321)||(13399848-13399962)
chr2 (206-321)||(43216137-43216252)
chr2 (206-320)||(4808882-4808996)
chr2 (202-318)||(15550672-15550789)
chr2 (206-321)||(16953362-16953477)
chr2 (194-321)||(32418150-32418275)
chr2 (206-321)||(43160012-43160128)
chr2 (192-320)||(63387-63521)
chr2 (206-285)||(649801-649880)
chr2 (206-321)||(32418574-32418689)
chr2 (206-321)||(6949870-6949987)
chr2 (243-321)||(13399462-13399540)
chr2 (202-310)||(20495192-20495301)
chr2 (206-314)||(25336034-25336143)
chr2 (206-295)||(24140128-24140217)
chr2 (206-317)||(28143461-28143572)
chr2 (202-265)||(9329911-9329974)
chr2 (240-311)||(5035900-5035972)
chr2 (206-317)||(14942275-14942389)
chr2 (276-321)||(5560978-5561023)
chr2 (202-302)||(22445638-22445736)
chr2 (202-264)||(9329829-9329892)
chr2 (201-278)||(3824179-3824256)
chr2 (228-317)||(2190506-2190597)
[»] chr4 (57 HSPs)
chr4 (206-321)||(34789385-34789500)
chr4 (206-321)||(14440256-14440371)
chr4 (206-321)||(28465509-28465624)
chr4 (206-321)||(56077752-56077867)
chr4 (206-321)||(54440997-54441112)
chr4 (192-321)||(12593013-12593142)
chr4 (200-321)||(26974280-26974402)
chr4 (206-321)||(21034238-21034354)
chr4 (193-320)||(45838976-45839105)
chr4 (202-321)||(28166003-28166122)
chr4 (202-321)||(33777631-33777750)
chr4 (201-321)||(46736653-46736773)
chr4 (201-321)||(41114155-41114277)
chr4 (201-302)||(6616670-6616771)
chr4 (206-321)||(28465084-28465199)
chr4 (204-321)||(14439829-14439946)
chr4 (204-320)||(16214924-16215040)
chr4 (206-321)||(12593451-12593566)
chr4 (206-320)||(46737084-46737198)
chr4 (206-321)||(36168759-36168874)
chr4 (193-321)||(34807106-34807235)
chr4 (193-321)||(33689819-33689946)
chr4 (206-321)||(34789810-34789926)
chr4 (206-321)||(54440574-54440687)
chr4 (210-321)||(45838554-45838665)
chr4 (193-321)||(19528859-19528988)
chr4 (206-321)||(19529121-19529237)
chr4 (206-294)||(24851319-24851407)
chr4 (202-302)||(35643554-35643654)
chr4 (194-321)||(36168320-36168450)
chr4 (206-320)||(24851894-24852009)
chr4 (206-321)||(33778040-33778155)
chr4 (202-321)||(34807567-34807686)
chr4 (203-321)||(6617090-6617208)
chr4 (201-321)||(21034664-21034785)
chr4 (228-321)||(35193333-35193426)
chr4 (198-321)||(41608369-41608493)
chr4 (206-291)||(1397598-1397683)
chr4 (228-313)||(17504395-17504480)
chr4 (201-321)||(55677385-55677506)
chr4 (206-317)||(23986523-23986635)
chr4 (206-294)||(41608870-41608958)
chr4 (228-317)||(40160119-40160208)
chr4 (201-317)||(229591-229707)
chr4 (203-314)||(40160525-40160636)
chr4 (206-320)||(26974673-26974788)
chr4 (196-313)||(229154-229271)
chr4 (199-314)||(51309939-51310055)
chr4 (196-317)||(17503967-17504088)
chr4 (206-317)||(24335764-24335876)
chr4 (209-317)||(30597951-30598059)
chr4 (202-277)||(31297161-31297236)
chr4 (206-269)||(35644042-35644105)
chr4 (206-276)||(44219378-44219448)
chr4 (193-313)||(18965130-18965250)
chr4 (200-277)||(51640957-51641034)
chr4 (206-317)||(24336194-24336306)
[»] chr8 (36 HSPs)
chr8 (206-321)||(599926-600041)
chr8 (200-321)||(18428189-18428311)
chr8 (201-321)||(41260269-41260389)
chr8 (206-321)||(16578524-16578639)
chr8 (208-321)||(18049595-18049709)
chr8 (206-317)||(5730820-5730931)
chr8 (206-321)||(28254428-28254544)
chr8 (206-302)||(15256278-15256374)
chr8 (206-321)||(34799082-34799198)
chr8 (206-320)||(9797155-9797270)
chr8 (206-321)||(15255856-15255971)
chr8 (193-320)||(34799512-34799639)
chr8 (204-321)||(18050019-18050136)
chr8 (201-321)||(599530-599650)
chr8 (206-302)||(2208717-2208813)
chr8 (206-321)||(9796729-9796844)
chr8 (206-321)||(16578111-16578226)
chr8 (206-321)||(28254854-28254969)
chr8 (206-321)||(41260689-41260804)
chr8 (206-321)||(42035775-42035890)
chr8 (206-321)||(35427240-35427355)
chr8 (203-302)||(35694325-35694424)
chr8 (200-318)||(7910613-7910730)
chr8 (206-319)||(7911046-7911159)
chr8 (228-314)||(42036206-42036293)
chr8 (228-321)||(5731240-5731333)
chr8 (243-321)||(26252849-26252927)
chr8 (200-317)||(28877321-28877438)
chr8 (206-321)||(6115538-6115654)
chr8 (206-321)||(35693871-35693988)
chr8 (201-311)||(18674146-18674256)
chr8 (202-254)||(35426841-35426893)
chr8 (204-317)||(18805165-18805277)
chr8 (282-321)||(35426892-35426931)
chr8 (193-317)||(2617735-2617860)
chr8 (193-317)||(9930087-9930212)
[»] chr1 (52 HSPs)
chr1 (196-321)||(21938556-21938681)
chr1 (201-318)||(37505065-37505183)
chr1 (206-321)||(9992157-9992273)
chr1 (206-321)||(34555808-34555925)
chr1 (199-321)||(30786767-30786890)
chr1 (194-321)||(44954654-44954781)
chr1 (203-321)||(50305210-50305331)
chr1 (206-321)||(10278978-10279090)
chr1 (206-314)||(44582493-44582602)
chr1 (206-321)||(9992583-9992698)
chr1 (204-321)||(29439348-29439467)
chr1 (205-317)||(45048157-45048269)
chr1 (202-321)||(39485064-39485183)
chr1 (206-320)||(16298685-16298799)
chr1 (202-319)||(8230071-8230188)
chr1 (193-321)||(29438920-29439049)
chr1 (203-307)||(37421386-37421491)
chr1 (206-302)||(30787245-30787341)
chr1 (201-321)||(52335938-52336058)
chr1 (206-321)||(1837508-1837623)
chr1 (206-321)||(16299110-16299224)
chr1 (206-321)||(44582060-44582175)
chr1 (206-321)||(44954229-44954344)
chr1 (193-321)||(17641792-17641925)
chr1 (206-314)||(2867914-2868022)
chr1 (193-321)||(4080011-4080139)
chr1 (206-321)||(10278551-10278667)
chr1 (228-321)||(443979-444072)
chr1 (206-319)||(2868138-2868251)
chr1 (206-321)||(23340186-23340301)
chr1 (202-314)||(37421159-37421273)
chr1 (206-296)||(50304442-50304532)
chr1 (229-321)||(37505496-37505587)
chr1 (202-317)||(45048567-45048682)
chr1 (243-321)||(17641405-17641483)
chr1 (206-321)||(34555382-34555499)
chr1 (206-313)||(17088575-17088682)
chr1 (210-315)||(23526665-23526770)
chr1 (206-316)||(50926233-50926345)
chr1 (206-313)||(44802606-44802714)
chr1 (231-317)||(9833583-9833670)
chr1 (197-316)||(50926674-50926793)
chr1 (207-316)||(25274760-25274869)
chr1 (204-321)||(6224698-6224817)
chr1 (206-321)||(8229640-8229758)
chr1 (246-313)||(29020923-29020991)
chr1 (200-317)||(44291742-44291860)
chr1 (206-315)||(23526964-23527073)
chr1 (206-314)||(44291304-44291415)
chr1 (206-314)||(29021298-29021408)
chr1 (240-314)||(36229414-36229489)
chr1 (202-277)||(50419389-50419464)
[»] chr6 (20 HSPs)
chr6 (193-321)||(5114458-5114586)
chr6 (205-321)||(24640613-24640729)
chr6 (206-321)||(25472440-25472556)
chr6 (202-321)||(25468848-25468969)
chr6 (194-321)||(31574153-31574280)
chr6 (206-321)||(30251119-30251235)
chr6 (206-321)||(5120897-5121012)
chr6 (206-321)||(31073570-31073685)
chr6 (206-321)||(31573723-31573843)
chr6 (206-321)||(29891508-29891627)
chr6 (206-317)||(32836428-32836539)
chr6 (193-321)||(29891070-29891198)
chr6 (202-317)||(35163183-35163298)
chr6 (206-320)||(31073146-31073267)
chr6 (195-317)||(35163617-35163741)
chr6 (229-321)||(28636318-28636409)
chr6 (276-321)||(28636624-28636669)
chr6 (206-317)||(33095717-33095829)
chr6 (202-275)||(31242805-31242878)
chr6 (206-254)||(22534219-22534267)
[»] scaffold0712 (2 HSPs)
scaffold0712 (196-320)||(6385-6509)
scaffold0712 (201-317)||(6827-6944)
[»] scaffold0709 (2 HSPs)
scaffold0709 (196-320)||(6403-6527)
scaffold0709 (201-317)||(6845-6962)
[»] scaffold0097 (2 HSPs)
scaffold0097 (206-319)||(46697-46811)
scaffold0097 (200-321)||(46263-46385)
[»] scaffold0007 (2 HSPs)
scaffold0007 (206-317)||(205799-205910)
scaffold0007 (201-293)||(210793-210885)
[»] scaffold1432 (1 HSPs)
scaffold1432 (206-316)||(498-608)
[»] scaffold0021 (1 HSPs)
scaffold0021 (243-314)||(159315-159387)
[»] scaffold0025 (1 HSPs)
scaffold0025 (286-321)||(78400-78435)


Alignment Details
Target: chr5 (Bit Score: 153; Significance: 4e-81; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 17 - 202
Target Start/End: Original strand, 24138390 - 24138577
Alignment:
Q  17 aggatatacttgggaaatgtagattttaaatcagaaagaatttgctcttcagcaaaatgattatcttcgtccaagagagaagcaaaggtgtattgtttgg 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  24138390 aggatatacttgggaaatgtagattttaaatcagaaagaatttgctcttcagcaaaatcattatcttcgtccaagagagaagcaaaggtgtattgtttgg 24138489  T
Q  117 acgccctgcacagtaaaaaa--tggtgtacatttttacttgtttacccatttaatcaaaacacataataccaaattcgataaaataaa 202  Q
    || |||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||    
T  24138490 acaccctgcacagtaaaaaaattggtttacatttttacttgtttacccatttaatcaaaacacatactactaaactcgataaaataaa 24138577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 197 - 321
Target Start/End: Complemental strand, 28290196 - 28290072
Alignment:
Q  197 aataaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatg 296  Q
    |||| ||| ||||||||||||||||| |||||||||||||||||| |||||||||||| |||| |||||||||||||||||||| |||||||||||||||    
T  28290196 aatataggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcatttttaaatcgaacaaaatcgtccttaaactatatg 28290097  T
Q  297 ttttttgcagttttagtcctatctc 321  Q
    |||||||||||||||||||||||||    
T  28290096 ttttttgcagttttagtcctatctc 28290072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 18 - 191
Target Start/End: Original strand, 19758674 - 19758844
Alignment:
Q  18 ggatatacttgggaaatgtagattttaaatcagaaagaatttgctcttcagcaaaatgattatcttcgtccaagagagaagcaaaggtgtattgtttgga 117  Q
    |||||||||||||||||||| |||| ||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||| |||     
T  19758674 ggatatacttgggaaatgtaaatttcaaatcagcaagaatttgttcttcagcaaaatgattatcttcgtctaagagagaagcaaatgtgtattgtctggg 19758773  T
Q  118 cgccctgcacagtaaaaaatggtgtacatttttacttgtttacccatttaatcaaaacacataataccaaattc 191  Q
    | ||||||| ||||||||||||  |||   ||  ||||||||||||||||||||||| ||||||||| ||||||    
T  19758774 caccctgcaaagtaaaaaatgggttac---ttagcttgtttacccatttaatcaaaatacataatactaaattc 19758844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 206 - 318
Target Start/End: Original strand, 18149736 - 18149848
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||| | ||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  18149736 ttaattacacttttgatcctaccatttggaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 18149835  T
Q  306 gttttagtcctat 318  Q
    |||||||||||||    
T  18149836 gttttagtcctat 18149848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 206 - 321
Target Start/End: Complemental strand, 8419163 - 8419049
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||||| |||||||||||||||||| ||||| |||||| |||||||||||||| |||||||||| |||||||||||||| |||||||||    
T  8419163 ttaattacacttttggtcctaccattttgaccaactcacgaatatggtcctatcttttttaaattgaacaaaatcgtccttaaactatat-ttttttgca 8419065  T
Q  306 gttttagtcctatctc 321  Q
    ||||||||||||||||    
T  8419064 gttttagtcctatctc 8419049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 206 - 313
Target Start/End: Complemental strand, 15029852 - 15029745
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||||| || ||||||||||||||| |||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||    
T  15029852 ttaattacacttttggtcctcccattttgaccaactcacgaaaatggtcttaccttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 15029753  T
Q  306 gttttagt 313  Q
    ||||||||    
T  15029752 gttttagt 15029745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 19291359 - 19291475
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatg-ttttttgc 304  Q
    ||||||||||||||||| |||| ||||||| ||||| || ||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  19291359 ttaattacacttttggtcctactattttgaacaactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttgc 19291458  T
Q  305 agttttagtcctatctc 321  Q
    |||||||||| ||||||    
T  19291459 agttttagtcttatctc 19291475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 207 - 321
Target Start/End: Original strand, 38900648 - 38900762
Alignment:
Q  207 taattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgcag 306  Q
    |||||||||||||||| ||  |||||||||||||| ||||||||| || || || ||||||||||||||||||| ||| |||| ||||||||||||||||    
T  38900648 taattacacttttggtcctcgcattttgaccaactcacgaaaatgatcctacctcttttaaatcgaacaaaatcgtccctaaattatatgttttttgcag 38900747  T
Q  307 ttttagtcctatctc 321  Q
    |||||||||||||||    
T  38900748 ttttagtcctatctc 38900762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 206 - 313
Target Start/End: Complemental strand, 38901183 - 38901076
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||||| || |||||||||| ||   |||||||||||| || | |||||||||||||||||||| ||||||||||||||||||||||||    
T  38901183 ttaattacacttttggtccttccattttgactaaagcacgaaaatggtcctaccctttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 38901084  T
Q  306 gttttagt 313  Q
    ||||||||    
T  38901083 gttttagt 38901076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 195 - 314
Target Start/End: Original strand, 27307053 - 27307172
Alignment:
Q  195 aaaataaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat- 293  Q
    |||||||||| ||||||||||||||||||||  |||||||||||||||| |||||||||||| | | ||| |||| |||||||||| ||| ||||||||     
T  27307053 aaaataaaggcttaattacacttttggttctcgcattttgaccaacttatgaaaatggtcatgtttctttcaaattgaacaaaatcatcc-taaactatc 27307151  T
Q  294 atgttttttgcagttttagtc 314  Q
    |||||||||||||||||||||    
T  27307152 atgttttttgcagttttagtc 27307172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 201 - 321
Target Start/End: Original strand, 28289682 - 28289802
Alignment:
Q  201 aaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtttt 300  Q
    |||| ||||||||||||||| | ||  |||||||||||||| |||||| | |||||| || ||||||||||||||||||| ||| |||| ||||||||||    
T  28289682 aaggcttaattacacttttgatccttgcattttgaccaactcacgaaattagtcatacctcttttaaatcgaacaaaatcgtccctaaattatatgtttt 28289781  T
Q  301 ttgcagttttagtcctatctc 321  Q
    || ||||||||||||||||||    
T  28289782 ttccagttttagtcctatctc 28289802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 206 - 318
Target Start/End: Complemental strand, 4967314 - 4967200
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtt--ttttg 303  Q
    ||||||||||||||||| ||  |||||||||||||| || ||||||||| || || ||||||||||||||||||| ||| |||||||||||||  |||||    
T  4967314 ttaattacacttttggtcctcacattttgaccaactcacaaaaatggtcttacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttttg 4967215  T
Q  304 cagttttagtcctat 318  Q
    |||||||||||||||    
T  4967214 cagttttagtcctat 4967200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 193 - 293
Target Start/End: Original strand, 21370676 - 21370776
Alignment:
Q  193 ataaaataaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaacta 292  Q
    ||||||| |||||||||||| | |||| || |||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||| || ||||||||    
T  21370676 ataaaatcaaggtttaattatattttttgtcctactattttgaccaactgacgaaaatggttatatcttttttaaatcgaacaaaatcgtctttaaacta 21370775  T
Q  293 t 293  Q
    |    
T  21370776 t 21370776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 206 - 319
Target Start/End: Complemental strand, 15115635 - 15115525
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||| | ||  |||||||||||||| |||||||||||| || || ||||||||||||||||||| |||||||||||||   ||||||||    
T  15115635 ttaattacacttttgatcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccttaaactata---tttttgca 15115539  T
Q  306 gttttagtcctatc 319  Q
    ||||||||| ||||    
T  15115538 gttttagtcatatc 15115525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 319
Target Start/End: Original strand, 4966818 - 4966932
Alignment:
Q  205 tttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgc 304  Q
    |||||||||||||||||| ||  |||||||||||||| |||||||| ||  |  || ||||||||||||||||||| ||| |||||||||||||||| ||    
T  4966818 tttaattacacttttggtcctcgcattttgaccaactcacgaaaatagtactgcctcttttaaatcgaacaaaatcgtccctaaactatatgtttttagc 4966917  T
Q  305 agttttagtcctatc 319  Q
    |||||||||| ||||    
T  4966918 agttttagtcatatc 4966932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 205 - 280
Target Start/End: Original strand, 14340400 - 14340475
Alignment:
Q  205 tttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatc 280  Q
    |||||||||| ||||||| |||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||    
T  14340400 tttaattacatttttggtcctaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatc 14340475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 206 - 321
Target Start/End: Complemental strand, 21371239 - 21371124
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||| | ||  |||||||||||||| |  ||| ||||| || || ||||||||| ||||||||| ||| ||||||||||||||||||||    
T  21371239 ttaattacacttttgatccttgcattttgaccaactcataaaattggtcctacctcttttaaatcaaacaaaatcgtccctaaactatatgttttttgca 21371140  T
Q  306 gttttagtcctatctc 321  Q
     |||||||||||||||    
T  21371139 attttagtcctatctc 21371124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 39083362 - 39083478
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaac--tatatgttttttg 303  Q
    ||||||||||||| | | ||| |||||||||||||| |||||||||||| ||| ||||||||||||||||||||  | |||||||  ||||| |||||||    
T  39083362 ttaattacacttt-gatcctatcattttgaccaactcacgaaaatggtcctattttttttaaatcgaacaaaattgttcttaaactatatatattttttg 39083460  T
Q  304 cagttttagtcctatctc 321  Q
    ||||||||||| ||||||    
T  39083461 cagttttagtcatatctc 39083478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 205 - 321
Target Start/End: Complemental strand, 14340954 - 14340835
Alignment:
Q  205 tttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactata---tgttttt 301  Q
    |||||||||| ||||||| ||  |||||||||||||| |||||| ||||||||  | ||||||||||||||||||| ||| |||||||||   | |||||    
T  14340954 tttaattacatttttggtacttgcattttgaccaactcacgaaattggtcatacatcttttaaatcgaacaaaatcgtccataaactatatatttttttt 14340855  T
Q  302 tgcagttttagtcctatctc 321  Q
    || |||||||||||||||||    
T  14340854 tgtagttttagtcctatctc 14340835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 229 - 321
Target Start/End: Complemental strand, 18150244 - 18150151
Alignment:
Q  229 attttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtt-ttttgcagttttagtcctatctc 321  Q
    |||||||| |||| |||||| ||||| || || ||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||    
T  18150244 attttgacaaactcacgaaattggtcctacctcttttaaatcgaacaaaatcatccctaaactatatgtttttttgcagttttagtcctatctc 18150151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 193 - 317
Target Start/End: Complemental strand, 20266471 - 20266346
Alignment:
Q  193 ataaaataaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaacta 292  Q
    |||||||  |||||||||| |||||||||| ||   |||||||||| ||||||||||||||||| ||| ||| ||||||||||||||| ||| |||||||    
T  20266471 ataaaatttaggtttaattgcacttttggtcctcgtattttgaccagcttacgaaaatggtcatgtctctttcaaatcgaacaaaatcgtccctaaacta 20266372  T
Q  293 t-atgttttttgcagttttagtccta 317  Q
    | ||| || ||| |||||||||||||    
T  20266371 tcatggttgttgtagttttagtccta 20266346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 206 - 317
Target Start/End: Original strand, 10721789 - 10721900
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat-atgttttttgc 304  Q
    ||||||||| ||||||| ||  ||||||||||| || |||||||||||| | ||| ||| ||||||||||||||| ||| |||||||| |||||||||||    
T  10721789 ttaattacatttttggtcctcacattttgaccagctcacgaaaatggtcttgtctctttcaaatcgaacaaaatcgtcc-taaactatcatgttttttgc 10721887  T
Q  305 agttttagtccta 317  Q
    |||||||||||||    
T  10721888 agttttagtccta 10721900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 206 - 310
Target Start/End: Original strand, 16752585 - 16752689
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||||| |   ||||||||||| || ||||||||| ||||   | ||| ||||||||||||||| ||| ||||||||||||||||||||    
T  16752585 ttaattacacttttggtccctgcattttgaccagctcacgaaaatgatcatgcttctttcaaatcgaacaaaatcgtccataaactatatgttttttgca 16752684  T
Q  306 gtttt 310  Q
    |||||    
T  16752685 gtttt 16752689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 206 - 313
Target Start/End: Complemental strand, 32697769 - 32697659
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtt---tttt 302  Q
    |||||||||||||||||  |  |||||||||||||| |||||| ||||| || || |||||||||||||| |||| ||| |||||||||||||   ||||    
T  32697769 ttaattacacttttggtcattgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacagaatcgtccctaaactatatgttttatttt 32697670  T
Q  303 gcagttttagt 313  Q
    |||||||||||    
T  32697669 gcagttttagt 32697659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 243 - 320
Target Start/End: Original strand, 5161622 - 5161700
Alignment:
Q  243 acgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatg-ttttttgcagttttagtcctatct 320  Q
    |||||||| ||||||||||||||||||||||||||||  || ||||| |||||| |||||||||||||||||| |||||    
T  5161622 acgaaaattgtcatatcttttttaaatcgaacaaaattgtctttaaattatatgtttttttgcagttttagtcttatct 5161700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 206 - 317
Target Start/End: Original strand, 22651348 - 22651459
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat-atgttttttgc 304  Q
    ||||||||| ||||||||||   |||||||||| || ||| ||||||||||  || ||||||||| ||||||| | |||||||||||| ||| |||||||    
T  22651348 ttaattacatttttggttctcgtattttgaccagctcacggaaatggtcatgcctcttttaaatcaaacaaaaccatccttaaactatcatg-tttttgc 22651446  T
Q  305 agttttagtccta 317  Q
    |||||||||||||    
T  22651447 agttttagtccta 22651459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 228 - 321
Target Start/End: Complemental strand, 5162090 - 5161996
Alignment:
Q  228 cattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtt-ttttgcagttttagtcctatctc 321  Q
    |||||||||||||| | || | | |||||| || ||||||||||||||||||| ||| |||| |||||||| ||||||| |||||||||||||||    
T  5162090 cattttgaccaactcatgagattagtcatacctcttttaaatcgaacaaaatcgtccctaaattatatgtttttttgcaattttagtcctatctc 5161996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 228 - 317
Target Start/End: Original strand, 13557017 - 13557106
Alignment:
Q  228 cattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat-atgttttttgcagttttagtccta 317  Q
    ||||||||||| || ||||||||||||||  || ||| ||||| ||||||||| | |||||||||| ||||||||||||||||||||||||    
T  13557017 cattttgaccagctcacgaaaatggtcatgcctctttcaaatcaaacaaaatcgt-cttaaactatcatgttttttgcagttttagtccta 13557106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 317
Target Start/End: Complemental strand, 41834608 - 41834490
Alignment:
Q  200 aaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat-atg-t 297  Q
    ||||| ||||||||||||||||| ||  ||||||||||| || |||||||||||| |  || ||| | ||||||||||| | ||| |||||||| ||| |    
T  41834608 aaaggcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcagatcgaacaaaaccgtcc-taaactatcatgtt 41834510  T
Q  298 tttttgcagttttagtccta 317  Q
    ||||||||||||||||||||    
T  41834509 tttttgcagttttagtccta 41834490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 206 - 293
Target Start/End: Complemental strand, 22651854 - 22651767
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat 293  Q
    |||||||||||||| || ||  ||||||||||| || |||||||||||  |  |||||| ||||||||||||||| ||| ||||||||    
T  22651854 ttaattacactttttgtcctcgcattttgaccagctcacgaaaatggttctgcctttttcaaatcgaacaaaatcgtccataaactat 22651767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 228 - 317
Target Start/End: Original strand, 32305843 - 32305932
Alignment:
Q  228 cattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat-atgttttttgcagttttagtccta 317  Q
    |||||||| || || |||||||| ||  || || ||||||||||||||||||| ||| |||||||| ||| ||||||||||||||||||||    
T  32305843 cattttgatcagctcacgaaaattgttctacctcttttaaatcgaacaaaatcgtccctaaactatcatg-tttttgcagttttagtccta 32305932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 317
Target Start/End: Original strand, 28494847 - 28494958
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat-atgttttttgc 304  Q
    ||||||||||||||||| ||  |||||||||||  | | |||||||||  |  || ||| |||||||||||||   |||| ||||||| |||||||||||    
T  28494847 ttaattacacttttggtccttacattttgaccagttcaggaaaatggttctgcctctttcaaatcgaacaaaactgtcct-aaactatcatgttttttgc 28494945  T
Q  305 agttttagtccta 317  Q
    |||||||||||||    
T  28494946 agttttagtccta 28494958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 266 - 317
Target Start/End: Original strand, 17260389 - 17260441
Alignment:
Q  266 aaatcgaacaaaatcctccttaaactat-atgttttttgcagttttagtccta 317  Q
    ||||||||||||||  ||| |||| ||| ||||||||||||||||||||||||    
T  17260389 aaatcgaacaaaattgtccataaattatcatgttttttgcagttttagtccta 17260441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 302
Target Start/End: Complemental strand, 27307603 - 27307507
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtttttt 302  Q
    ||||||| ||||||||| |   |||||||||||  | |||||||||||  |  || ||| ||||||||||||| | ||| |||||||||||||||||    
T  27307603 ttaattagacttttggtccccgcattttgaccagttcacgaaaatggttctccctctttcaaatcgaacaaaaccgtccataaactatatgtttttt 27307507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 105; Significance: 2e-52; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 201 - 321
Target Start/End: Complemental strand, 44677020 - 44676900
Alignment:
Q  201 aaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtttt 300  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  44677020 aaggtttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 44676921  T
Q  301 ttgcagttttagtcctatctc 321  Q
    ||||| |||||||||||||||    
T  44676920 ttgcaattttagtcctatctc 44676900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 200 - 321
Target Start/End: Original strand, 49951543 - 49951664
Alignment:
Q  200 aaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttt 299  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  49951543 aaaggtttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttt 49951642  T
Q  300 tttgcagttttagtcctatctc 321  Q
    |||||| |||||||||||||||    
T  49951643 tttgcaattttagtcctatctc 49951664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 201 - 321
Target Start/End: Complemental strand, 49720909 - 49720789
Alignment:
Q  201 aaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtttt 300  Q
    |||| ||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  49720909 aaggcttaattacacttttggtcctactattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 49720810  T
Q  301 ttgcagttttagtcctatctc 321  Q
    |||||||||||||| ||||||    
T  49720809 ttgcagttttagtcttatctc 49720789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 43678298 - 43678413
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  43678298 ttaattacacttttggtcctaccattttgaccaactcacgaacatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 43678397  T
Q  306 gttttagtcctatctc 321  Q
    ||||||||| ||||||    
T  43678398 gttttagtcttatctc 43678413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 207 - 321
Target Start/End: Original strand, 329850 - 329964
Alignment:
Q  207 taattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgcag 306  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||    
T  329850 taattacacttttggttcttccattttgaccaactcacgaaaatggtcctaacttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcag 329949  T
Q  307 ttttagtcctatctc 321  Q
    |||||||||||||||    
T  329950 ttttagtcctatctc 329964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 196 - 321
Target Start/End: Complemental strand, 51473409 - 51473283
Alignment:
Q  196 aaataaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatat 295  Q
    |||| |||||||||||||||||||| | |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  51473409 aaatcaaggtttaattacacttttgatcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatat 51473310  T
Q  296 gtt-ttttgcagttttagtcctatctc 321  Q
    ||| |||||||||||||||||||||||    
T  51473309 gtttttttgcagttttagtcctatctc 51473283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 38535312 - 38535427
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||||| |||||||||||||||||| | |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  38535312 ttaattacacttttggtcctaccattttgaccaactcaggaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 38535411  T
Q  306 gttttagtcctatctc 321  Q
    |||| |||||||||||    
T  38535412 gtttcagtcctatctc 38535427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 193 - 317
Target Start/End: Complemental strand, 50662968 - 50662844
Alignment:
Q  193 ataaaataaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaacta 292  Q
    ||||| ||| || ||||||| ||||||||| ||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  50662968 ataaattaatggcttaattatacttttggtcctaccattttgacaaactcacgaaaatagtcatatcttttttaaatcgaacaaaatcgtccttaaacta 50662869  T
Q  293 tatgttttttgcagttttagtccta 317  Q
    |||||||||||||||||||||||||    
T  50662868 tatgttttttgcagttttagtccta 50662844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 207 - 321
Target Start/End: Original strand, 55389609 - 55389723
Alignment:
Q  207 taattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgcag 306  Q
    |||||||||||||||| || |||||| |||||||| |||||||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||    
T  55389609 taattacacttttggtcctcccatttcgaccaactcacgaaaatggtcctaccttttttaaatcgaacaaaatcgtccttaaactatatgttttttgcag 55389708  T
Q  307 ttttagtcctatctc 321  Q
    |||||||||||||||    
T  55389709 ttttagtcctatctc 55389723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 206 - 318
Target Start/End: Original strand, 14654202 - 14654314
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||| | |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||    
T  14654202 ttaattacacttttgatactaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtctttaaactatatgttttttgca 14654301  T
Q  306 gttttagtcctat 318  Q
     ||||||||||||    
T  14654302 tttttagtcctat 14654314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 41998232 - 41998348
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatg-ttttttgc 304  Q
    ||||||||||||||||| ||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  41998232 ttaattacacttttggtcctaccattttgaccaactcgcgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttgc 41998331  T
Q  305 agttttagtcctatctc 321  Q
    |||||||||| ||||||    
T  41998332 agttttagtcatatctc 41998348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 47431699 - 47431815
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatg-ttttttgc 304  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||| || ||||||||||||||||||| || |||||||||||| ||||||||    
T  47431699 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtctttaaactatatgtttttttgc 47431798  T
Q  305 agttttagtcctatctc 321  Q
    |||||||||||||||||    
T  47431799 agttttagtcctatctc 47431815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 206 - 321
Target Start/End: Complemental strand, 51828501 - 51828385
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtt-ttttgc 304  Q
    ||||||||||||||||| |||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||  ||||||||||||||||| ||||||    
T  51828501 ttaattacacttttggtcctaccactttgaccaactcacgaaaatggtcatatattttttaaatcgaacaaaattgtccttaaactatatgtttttttgc 51828402  T
Q  305 agttttagtcctatctc 321  Q
    |||||||||||||||||    
T  51828401 agttttagtcctatctc 51828385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 201 - 321
Target Start/End: Complemental strand, 16701340 - 16701217
Alignment:
Q  201 aaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtt-- 298  Q
    |||| ||||||||| ||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||      
T  16701340 aaggcttaattacatttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaattcgaacaaaatcgtccttaaactatatgtttt 16701241  T
Q  299 -ttttgcagttttagtcctatctc 321  Q
     |||||||||||||||| ||||||    
T  16701240 tttttgcagttttagtcatatctc 16701217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 209 - 321
Target Start/End: Original strand, 34104644 - 34104756
Alignment:
Q  209 attacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgcagtt 308  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||  |||||||||||||| |||||||||| || ||||||||||||||||||||||||    
T  34104644 attacactttttgttctaccattttgaccaactcacgaaaatggttctatcttttttaaattgaacaaaatcgtcattaaactatatgttttttgcagtt 34104743  T
Q  309 ttagtcctatctc 321  Q
    |||||| ||||||    
T  34104744 ttagtcatatctc 34104756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 206 - 321
Target Start/End: Complemental strand, 32730932 - 32730817
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    |||||||||||||||||  ||||||||| ||||||| | |||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  32730932 ttaattacacttttggtcataccattttaaccaactcaagaaaatggtcctatcttttttaaattgaacaaaatcgtccttaaactatatgttttttgca 32730833  T
Q  306 gttttagtcctatctc 321  Q
    |||||| |||||||||    
T  32730832 gttttaatcctatctc 32730817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 206 - 321
Target Start/End: Complemental strand, 51829083 - 51828968
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    |||||||||||||||||  ||| ||||||| ||||| |||||||||||| |||||||||||| || ||||||||| ||||||||||||||||||||||||    
T  51829083 ttaattacacttttggtcatactattttgatcaactcacgaaaatggtcgtatcttttttaattcaaacaaaatcgtccttaaactatatgttttttgca 51828984  T
Q  306 gttttagtcctatctc 321  Q
    ||||||||||||||||    
T  51828983 gttttagtcctatctc 51828968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 203 - 321
Target Start/End: Complemental strand, 40839198 - 40839080
Alignment:
Q  203 ggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtttttt 302  Q
    |||||||||||||||||||| ||  ||||||||| |||| |||||||||||| || || ||||||||||||||||||| ||| |||||||||||||||||    
T  40839198 ggtttaattacacttttggtcctcacattttgacaaactcacgaaaatggtcttacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttt 40839099  T
Q  303 gcagttttagtcctatctc 321  Q
    |||||||||||||||||||    
T  40839098 gcagttttagtcctatctc 40839080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 206 - 302
Target Start/End: Original strand, 2051298 - 2051394
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtttttt 302  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||    
T  2051298 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgttcttaaactatatgtttttt 2051394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 206 - 321
Target Start/End: Complemental strand, 46013966 - 46013850
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtt-ttttgc 304  Q
    ||||||||||||||||| ||| ||||||||||||||  | ||||||||  ||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  46013966 ttaattacacttttggtactatcattttgaccaactcccaaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttgc 46013867  T
Q  305 agttttagtcctatctc 321  Q
    |||||||||||||||||    
T  46013866 agttttagtcctatctc 46013850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 206 - 321
Target Start/End: Complemental strand, 52237360 - 52237245
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||||| ||  |||||||||||||| |||||||||||| || || ||||||||||||||||||| ||| |||| |||||||||||||||    
T  52237360 ttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaattatatgttttttgca 52237261  T
Q  306 gttttagtcctatctc 321  Q
    ||||||||||||||||    
T  52237260 gttttagtcctatctc 52237245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 195 - 321
Target Start/End: Complemental strand, 330390 - 330264
Alignment:
Q  195 aaaataaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactata 294  Q
    |||| ||||| |||||||||| |||||| ||  |||||||||||||| |||||||||||| || |||||||||||| ||||||||| ||| |||||||||    
T  330390 aaaaaaaaggcttaattacacatttggtcctcgcattttgaccaactcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtccctaaactata 330291  T
Q  295 tgttttttgcagttttagtcctatctc 321  Q
    |||||||||||||||||||| ||||||    
T  330290 tgttttttgcagttttagtcatatctc 330264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 202 - 319
Target Start/End: Original strand, 16689357 - 16689474
Alignment:
Q  202 aggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttt 301  Q
    ||||||||||||| ||||||| ||| |||||||||||||| |||||| ||||| || || ||||||||||||||||||| ||| |||| |||||||||||    
T  16689357 aggtttaattacagttttggtcctagcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccataaaatatatgttttt 16689456  T
Q  302 tgcagttttagtcctatc 319  Q
    ||||||||||||||||||    
T  16689457 tgcagttttagtcctatc 16689474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 202 - 319
Target Start/End: Original strand, 40838651 - 40838768
Alignment:
Q  202 aggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttt 301  Q
    ||||||||||||||||||| | ||  |||||||||||||| ||||||||||||||| || ||||||||| ||||||||| ||| ||||||||||||||||    
T  40838651 aggtttaattacacttttgatcctcgcattttgaccaactcacgaaaatggtcatacctcttttaaatcaaacaaaatcgtccataaactatatgttttt 40838750  T
Q  302 tgcagttttagtcctatc 319  Q
    ||||||||||||| ||||    
T  40838751 tgcagttttagtcatatc 40838768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 201 - 321
Target Start/End: Original strand, 51827955 - 51828075
Alignment:
Q  201 aaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtttt 300  Q
    |||| ||||||||||||||||| ||  |||||||||||||| |||||| ||||| || || ||||||||||||||||||| ||| |||||||||||||||    
T  51827955 aaggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctagctcttttaaatcgaacaaaatcgtccctaaactatatgtttt 51828054  T
Q  301 ttgcagttttagtcctatctc 321  Q
    ||||| |||||||||||||||    
T  51828055 ttgcatttttagtcctatctc 51828075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 200 - 321
Target Start/End: Original strand, 51828536 - 51828658
Alignment:
Q  200 aaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatg-tt 298  Q
    ||||| ||||||||||||||||| ||  |||||||||||| |||||||| ||||| || || ||||||||||||||||||| ||| ||||||||||| ||    
T  51828536 aaaggcttaattacacttttggtccttgcattttgaccaaattacgaaattggtcttacctcttttaaatcgaacaaaatcgtccgtaaactatatgttt 51828635  T
Q  299 ttttgcagttttagtcctatctc 321  Q
    |||||||||||||||||||||||    
T  51828636 ttttgcagttttagtcctatctc 51828658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 200 - 321
Target Start/End: Original strand, 2044268 - 2044389
Alignment:
Q  200 aaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttt 299  Q
    ||||| |||||| |||||||||||||  |||||||||||||| | ||||||||||||| || ||||||||||||||||||| ||| |||| |||||||||    
T  2044268 aaaggcttaatttcacttttggttctcgcattttgaccaactcatgaaaatggtcatacctcttttaaatcgaacaaaatcgtccataaattatatgttt 2044367  T
Q  300 tttgcagttttagtcctatctc 321  Q
    |||| |||||||||| ||||||    
T  2044368 tttggagttttagtcatatctc 2044389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 205 - 321
Target Start/End: Original strand, 22370598 - 22370715
Alignment:
Q  205 tttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatg-ttttttg 303  Q
    |||||||||||||||||| ||  |||||||||||||| |||||||||||| || |||||||||| | ||||||||| ||| ||||||||||| |||||||    
T  22370598 tttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctaccttttttaaaccaaacaaaatcgtccctaaactatatgtttttttg 22370697  T
Q  304 cagttttagtcctatctc 321  Q
    ||||||||||||||||||    
T  22370698 cagttttagtcctatctc 22370715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 200 - 321
Target Start/End: Original strand, 46013419 - 46013540
Alignment:
Q  200 aaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttt 299  Q
    ||||| ||||||||||||||| | ||  |||||||||||||| |||||| |||||||| || ||||||||||||||||||| ||| |||| |||||||||    
T  46013419 aaaggcttaattacacttttgatccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaagtatatgttt 46013518  T
Q  300 tttgcagttttagtcctatctc 321  Q
    ||||||||||||||| ||||||    
T  46013519 tttgcagttttagtcatatctc 46013540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 206 - 314
Target Start/End: Complemental strand, 52375874 - 52375766
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||||| ||  |||||||||||||| |||||||||||| || || |||||||| |||||||||| ||| ||||||||||||||||||||    
T  52375874 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaattgaacaaaatcgtccataaactatatgttttttgca 52375775  T
Q  306 gttttagtc 314  Q
    |||||||||    
T  52375774 gttttagtc 52375766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 52375330 - 52375445
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||||| ||  |||||| ||||| | ||||||||||||||| || |||||||| |||||||||| ||| ||||||||||||||||||||    
T  52375330 ttaattacacttttggtcctcacattttaaccaattcacgaaaatggtcatacctcttttaaattgaacaaaatcgtccctaaactatatgttttttgca 52375429  T
Q  306 gttttagtcctatctc 321  Q
    |||||||| |||||||    
T  52375430 gttttagttctatctc 52375445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 206 - 319
Target Start/End: Original strand, 52236819 - 52236932
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    |||||||||||||| || ||  |||||||| ||| | ||||||||||||||| || ||||||||||||||||||| ||| ||||||||||||||||||||    
T  52236819 ttaattacacttttagtcctcgcattttgaacaattcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgca 52236918  T
Q  306 gttttagtcctatc 319  Q
    ||||||||| ||||    
T  52236919 gttttagtcatatc 52236932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 195 - 321
Target Start/End: Original strand, 25534882 - 25535009
Alignment:
Q  195 aaaataaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcct-ccttaaactat 293  Q
    |||| ||||| ||||||||||||||||| ||  |||||||||||| | | |||||||||| || || ||||||||||||||||||| | || |||| |||    
T  25534882 aaaaaaaaggcttaattacacttttggtcctcgcattttgaccaattcatgaaaatggtcctacctcttttaaatcgaacaaaatcgtcccctaaattat 25534981  T
Q  294 atgttttttgcagttttagtcctatctc 321  Q
    ||||||||||||||||||||||||||||    
T  25534982 atgttttttgcagttttagtcctatctc 25535009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 206 - 321
Target Start/End: Complemental strand, 38535838 - 38535723
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||| ||||||||| |   ||||||||||||||||||||| | |||  |||| |||||||||||| |||||| ||| ||||||||||||||||||||    
T  38535838 ttaattatacttttggtccgtgcattttgaccaacttacgaaattagtccgatctcttttaaatcgaataaaatcgtccctaaactatatgttttttgca 38535739  T
Q  306 gttttagtcctatctc 321  Q
    ||||||||||||||||    
T  38535738 gttttagtcctatctc 38535723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 199 - 317
Target Start/End: Complemental strand, 41998778 - 41998660
Alignment:
Q  199 taaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatg-t 297  Q
    |||||| ||||||||||||||||| ||  ||||||||||||||||||||| ||||| || || ||||||||||||||||||| ||| | ||||||||| |    
T  41998778 taaaggcttaattacacttttggtccttgcattttgaccaacttacgaaattggtcctacctcttttaaatcgaacaaaatcgtccct-aactatatgtt 41998680  T
Q  298 tttttgcagttttagtccta 317  Q
    ||||||||||||||||||||    
T  41998679 tttttgcagttttagtccta 41998660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 49720374 - 49720489
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||| | ||  |||||||||||||| |||||| ||||| || || ||||||||||||||||||| ||| |||| |||| ||||||||||    
T  49720374 ttaattacacttttgatccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaagtatacgttttttgca 49720473  T
Q  306 gttttagtcctatctc 321  Q
    ||||||||||||||||    
T  49720474 gttttagtcctatctc 49720489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 206 - 321
Target Start/End: Complemental strand, 49952089 - 49951974
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||| ||||||| ||  |||||||||||||| |||||| ||||| || || ||||||||||||||||||| || |||||||| ||||||||||||    
T  49952089 ttaattacatttttggtccttgcattttgaccaactcacgaaattggtcttacctcttttaaatcgaacaaaatcgtcattaaactacatgttttttgca 49951990  T
Q  306 gttttagtcctatctc 321  Q
    ||||||||| ||||||    
T  49951989 gttttagtcatatctc 49951974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 40275096 - 40275213
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatg--ttttttg 303  Q
    ||||||||||||||||| ||  |||||||||||||| |||||||||||| || || ||||||||||||||||||  ||| |||||| ||||  |||||||    
T  40275096 ttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaattgtccctaaactctatgttttttttg 40275195  T
Q  304 cagttttagtcctatctc 321  Q
    ||||||||||||||||||    
T  40275196 cagttttagtcctatctc 40275213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 193 - 321
Target Start/End: Complemental strand, 14654745 - 14654619
Alignment:
Q  193 ataaaataaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaacta 292  Q
    |||||| ||||| ||||||||||||||||| ||  |||||||||||||| |||||| |||   || || ||||||||||||||||||| ||| |||||      
T  14654745 ataaaagaaaggcttaattacacttttggtccttgcattttgaccaactcacgaaattggctctacctcttttaaatcgaacaaaatcgtccgtaaac-- 14654648  T
Q  293 tatgttttttgcagttttagtcctatctc 321  Q
    |||||||||||||||||||||||||||||    
T  14654647 tatgttttttgcagttttagtcctatctc 14654619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 206 - 314
Target Start/End: Complemental strand, 36701639 - 36701530
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat-atgttttttgc 304  Q
    ||||||||||||||||| ||  ||||||||||| || |||||||||||||| ||| ||| ||||||||||||||| ||| |||||||| |||||||||||    
T  36701639 ttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgtctctttcaaatcgaacaaaatcatccctaaactatcatgttttttgc 36701540  T
Q  305 agttttagtc 314  Q
    ||||||||||    
T  36701539 agttttagtc 36701530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 206 - 319
Target Start/End: Complemental strand, 40275636 - 40275524
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||||| ||  |||||||||||||| |||||| ||||| || || ||||||||||||||||||| ||  ||||||||||||||||||||    
T  40275636 ttaattacacttttggtcctcacattttgaccaactcacgaaa-tggtcctacctcttttaaatcgaacaaaatcgtctctaaactatatgttttttgca 40275538  T
Q  306 gttttagtcctatc 319  Q
    ||||||||| ||||    
T  40275537 gttttagtcatatc 40275524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 30513725 - 30513840
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttt-tgc 304  Q
    ||||||||| ||||||| ||  ||||||||| |||| |||||||||||| |||||||||||||||||| |||||| | |||||||||||||||||| |||    
T  30513725 ttaattacatttttggtccttgcattttgacaaactcacgaaaatggtcctatcttttttaaatcgaataaaatcgt-cttaaactatatgtttttctgc 30513823  T
Q  305 agttttagtcctatctc 321  Q
    |||||||||| ||||||    
T  30513824 agttttagtcatatctc 30513840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 202 - 321
Target Start/End: Original strand, 32730388 - 32730507
Alignment:
Q  202 aggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttt 301  Q
    ||||||||||||||||||||| ||  ||||||||||||||   |||| ||||| || || |||||||| |||||||||| ||| ||||||||||||||||    
T  32730388 aggtttaattacacttttggtccttgcattttgaccaactcttgaaattggtcctacctcttttaaattgaacaaaatcgtccctaaactatatgttttt 32730487  T
Q  302 tgcagttttagtcctatctc 321  Q
    |||||||||| || ||||||    
T  32730488 tgcagttttaatcgtatctc 32730507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 44676475 - 44676590
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||||| ||  ||||||||| |||| | |||| || ||||| || ||||||||||||||||| | ||| ||||||||||||||||||||    
T  44676475 ttaattacacttttggtccttgcattttgacaaactcatgaaattgatcatacctcttttaaatcgaacaaaaccgtccctaaactatatgttttttgca 44676574  T
Q  306 gttttagtcctatctc 321  Q
    | ||||||||||||||    
T  44676575 gctttagtcctatctc 44676590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 206 - 317
Target Start/End: Complemental strand, 55390140 - 55390029
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||||| ||  |||||| ||||| | |||||||||||| || |||||||||||| ||||||||| ||  |||||||||||||||||| |    
T  55390140 ttaattacacttttggtcctcgcattttaaccaattcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtcactaaactatatgttttttgta 55390041  T
Q  306 gttttagtccta 317  Q
    ||||||||||||    
T  55390040 gttttagtccta 55390029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 200 - 321
Target Start/End: Complemental strand, 34105199 - 34105076
Alignment:
Q  200 aaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtt- 298  Q
    |||| ||| |||||||||||||| ||  ||||||||||||||||||||  ||||| |  || ||||||||||||||||||| ||| |||||||||||||     
T  34105199 aaagatttgattacacttttggtccttgcattttgaccaacttacgaagttggtcctccctcttttaaatcgaacaaaatcgtccctaaactatatgttt 34105100  T
Q  299 -ttttgcagttttagtcctatctc 321  Q
     ||||||||||||||||| |||||    
T  34105099 tttttgcagttttagtcccatctc 34105076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 206 - 320
Target Start/End: Complemental strand, 43678827 - 43678713
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||||| ||  |||||||| ||||| |||||  |||||  | || ||||||||||||||||||| ||| ||||||||||||||||||||    
T  43678827 ttaattacacttttggtccttgcattttgatcaactcacgaacttggtccaacctcttttaaatcgaacaaaatcgtccataaactatatgttttttgca 43678728  T
Q  306 gttttagtcctatct 320  Q
    |||| |||| |||||    
T  43678727 gtttcagtcatatct 43678713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 201 - 314
Target Start/End: Original strand, 39010073 - 39010186
Alignment:
Q  201 aaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtttt 300  Q
    |||| ||||||||| ||||||| ||  |||||||||||||| || ||| || ||||| || ||||||||||||||||||  | |||||||| ||||||||    
T  39010073 aaggcttaattacatttttggtccttgcattttgaccaactcacaaaattgctcatacctcttttaaatcgaacaaaattgttcttaaactgtatgtttt 39010172  T
Q  301 ttgcagttttagtc 314  Q
    ||||||||||||||    
T  39010173 ttgcagttttagtc 39010186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 228 - 317
Target Start/End: Original strand, 43222415 - 43222504
Alignment:
Q  228 cattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgcagttttagtccta 317  Q
    |||||||||||||| |||||||| || || ||| ||||||||||||||||||| ||| |||||||||||||||||||| ||||| |||||    
T  43222415 cattttgaccaactcacgaaaatagttatgtctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgcatttttaatccta 43222504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 202 - 313
Target Start/End: Original strand, 27199701 - 27199813
Alignment:
Q  202 aggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatg-tttt 300  Q
    ||||||||||||| ||||||| ||  ||||||||||| || ||||||||||||||  || ||| ||||||||||||| | ||  ||||||||||| ||||    
T  27199701 aggtttaattacatttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtcactaaactatatgttttt 27199800  T
Q  301 ttgcagttttagt 313  Q
    |||||||||||||    
T  27199801 ttgcagttttagt 27199813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 227 - 315
Target Start/End: Complemental strand, 39010543 - 39010456
Alignment:
Q  227 ccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgcagttttagtcc 315  Q
    |||||||||||| || ||||||||| || ||||||||||||||||||||||||| ||||||| |  |||||||||| ||||||||||||    
T  39010543 ccattttgaccagctcacgaaaatgatcctatcttttttaaatcgaacaaaatcgtccttaatccgtatgtttttt-cagttttagtcc 39010456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 201 - 321
Target Start/End: Original strand, 51472853 - 51472973
Alignment:
Q  201 aaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtttt 300  Q
    |||| ||||||| ||||||||| ||  |||||||||||||| | |||| |  || || || ||||||||| ||||||||  ||| |||| ||||||||||    
T  51472853 aaggcttaattatacttttggtccttgcattttgaccaactcatgaaatttttcctacctcttttaaatcaaacaaaattgtccctaaagtatatgtttt 51472952  T
Q  301 ttgcagttttagtcctatctc 321  Q
    |||||||||||||||||||||    
T  51472953 ttgcagttttagtcctatctc 51472973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 206 - 315
Target Start/End: Complemental strand, 43222933 - 43222823
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatg-ttttttgc 304  Q
    ||||| ||||||||||| ||  ||||||||| | |  ||||||||||||||  || ||||||||||||||||||| ||| |||||| |||| ||||||||    
T  43222933 ttaatcacacttttggtcctcgcattttgacaagcgcacgaaaatggtcatgcctcttttaaatcgaacaaaatcgtccctaaactttatgtttttttgc 43222834  T
Q  305 agttttagtcc 315  Q
    |||||||||||    
T  43222833 agttttagtcc 43222823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 206 - 314
Target Start/End: Original strand, 49407799 - 49407907
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||||| ||  ||||||||||| || ||||||||||||||  || ||| |||| |||||||| | ||| |||||| |||||||| | ||    
T  49407799 ttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatagaacaaaaccgtccctaaactttatgttttgtaca 49407898  T
Q  306 gttttagtc 314  Q
    |||||||||    
T  49407899 gttttagtc 49407907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 206 - 317
Target Start/End: Complemental strand, 50901070 - 50900959
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||||| ||  ||||||||||| || || ||||||| | |  || ||  ||||||||||||| | ||| ||||||||||||||||||||    
T  50901070 ttaattacacttttggtcctcgcattttgaccagctcacaaaaatggccctgcctcttacaaatcgaacaaaaccgtccctaaactatatgttttttgca 50900971  T
Q  306 gttttagtccta 317  Q
    ||||| ||||||    
T  50900970 gtttttgtccta 50900959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 302
Target Start/End: Original strand, 36701104 - 36701206
Alignment:
Q  201 aaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat-atgttt 299  Q
    |||| ||||||||||||||||| ||  |||||||| ||||| ||||||||| ||||  || ||| ||||||||||||||| ||| |||||||| ||||||    
T  36701104 aaggcttaattacacttttggtcctcgcattttgatcaactcacgaaaatgatcatgcctctttcaaatcgaacaaaatcgtccataaactatcatgttt 36701203  T
Q  300 ttt 302  Q
    |||    
T  36701204 ttt 36701206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 317
Target Start/End: Original strand, 55192121 - 55192232
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    |||||||||||||| || |   ||||||||||| || ||||||||||||    || ||| ||||| ||||||| | ||| |||||||||||||||||| |    
T  55192121 ttaattacacttttagtccccgcattttgaccagctcacgaaaatggtctcgcctctttcaaatcaaacaaaaccgtccataaactatatgttttttgta 55192220  T
Q  306 gttttagtccta 317  Q
    ||||||||||||    
T  55192221 gttttagtccta 55192232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 314
Target Start/End: Complemental strand, 27200234 - 27200126
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat-atgttttttgc 304  Q
    ||||||||||||||||| ||  ||||||||||| || |||||||||||  |  || ||| ||||||||||| | | ||| |||||||| |||||||||||    
T  27200234 ttaattacacttttggtccttgcattttgaccagctcacgaaaatggttctgcctctttcaaatcgaacaataccgtcc-taaactatcatgttttttgc 27200136  T
Q  305 agttttagtc 314  Q
    ||||||||||    
T  27200135 agttttagtc 27200126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 317
Target Start/End: Original strand, 37075689 - 37075803
Alignment:
Q  206 ttaattacacttttggttctac-cattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatg---ttttt 301  Q
    ||||||||||||||||| || | |||||||||||||| |||||||||||| |  || ||| ||||| ||||||  | ||| |||||||||||   |||||    
T  37075689 ttaattacacttttggt-ctccgcattttgaccaactcacgaaaatggtcctgcctctttcaaatcaaacaaacccgtccctaaactatatgtttttttt 37075787  T
Q  302 tgcagttttagtccta 317  Q
    ||||||||||||||||    
T  37075788 tgcagttttagtccta 37075803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 317
Target Start/End: Complemental strand, 49408324 - 49408212
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat-atg-ttttttg 303  Q
    ||||||||||||||||| ||  ||||||||||| || |||||||||||  | ||| ||| |||||||||||||   ||| |||||||| ||| |||||||    
T  49408324 ttaattacacttttggtactcgcattttgaccatctcacgaaaatggttgtgtctctttcaaatcgaacaaaactgtcc-taaactatcatgtttttttg 49408226  T
Q  304 cagttttagtccta 317  Q
    ||||||||||||||    
T  49408225 cagttttagtccta 49408212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 230 - 313
Target Start/End: Complemental strand, 8874205 - 8874120
Alignment:
Q  230 ttttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtt--ttttgcagttttagt 313  Q
    ||||||||| || |||||||||||| |   | ||||||||||||||||| | ||| |||||||||||||  |||||||||||||||    
T  8874205 ttttgaccagctcacgaaaatggtcctgcttcttttaaatcgaacaaaaccttccctaaactatatgttttttttgcagttttagt 8874120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 205 - 278
Target Start/End: Original strand, 8873693 - 8873765
Alignment:
Q  205 tttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaa 278  Q
    |||||||||| ||||||| ||  |||||||| ||  |||||||||||||||| ||| |||||||||||||||||    
T  8873693 tttaattaca-ttttggtcctcgcattttgatcagtttacgaaaatggtcatgtctcttttaaatcgaacaaaa 8873765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 294
Target Start/End: Complemental strand, 33412697 - 33412609
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactata 294  Q
    ||||||||||||||||| ||  |||||||| || || |||||||||||  | ||| |||  |||||||||||||| ||| |||||||||    
T  33412697 ttaattacacttttggtcctcgcattttgatcagctcacgaaaatggttctgtctctttcgaatcgaacaaaatcgtccctaaactata 33412609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 317
Target Start/End: Original strand, 50900558 - 50900647
Alignment:
Q  229 attttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat-atgtttttt-gcagttttagtccta 317  Q
    ||||||| || || |||||||||||| || || ||| ||||||||||||| | ||| |||||||| ||||||||| |||||||||||||||    
T  50900558 attttgatcagctcacgaaaatggtcctaactctttcaaatcgaacaaaaccgtcc-taaactatcatgttttttcgcagttttagtccta 50900647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 314
Target Start/End: Complemental strand, 37076217 - 37076109
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat-atgttttttgc 304  Q
    ||||||||| ||||||| ||  |||||||| || || ||||||||||||    || ||| ||||||||||||||| ||| |||||||| ||||||||| |    
T  37076217 ttaattacatttttggtcctcgcattttgatcagctcacgaaaatggtcccgcctctttcaaatcgaacaaaatcgtcc-taaactatcatgttttttac 37076119  T
Q  305 agttttagtc 314  Q
    | ||||||||    
T  37076118 atttttagtc 37076109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 104; Significance: 8e-52; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 16917716 - 16917831
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16917716 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 16917815  T
Q  306 gttttagtcctatctc 321  Q
    ||||||||| ||||||    
T  16917816 gttttagtcatatctc 16917831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 205 - 321
Target Start/End: Complemental strand, 25637742 - 25637626
Alignment:
Q  205 tttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgc 304  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  25637742 tttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgc 25637643  T
Q  305 agttttagtcctatctc 321  Q
    |||||||||||||||||    
T  25637642 agttttagtcctatctc 25637626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 193 - 321
Target Start/End: Complemental strand, 7733043 - 7732915
Alignment:
Q  193 ataaaataaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaacta 292  Q
    |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||||||| || ||||||||||||||||||||||||| |||||||||||    
T  7733043 ataaaaaaaaggcttaattacacttttggtcctaccattttgaccaactcacgaaaatgatcctatcttttttaaatcgaacaaaatcgtccttaaacta 7732944  T
Q  293 tatgttttttgcagttttagtcctatctc 321  Q
    ||||||||||||| |||||||||||||||    
T  7732943 tatgttttttgcaattttagtcctatctc 7732915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 9181535 - 9181650
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  9181535 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatattttttttgca 9181634  T
Q  306 gttttagtcctatctc 321  Q
    ||||||||||||||||    
T  9181635 gttttagtcctatctc 9181650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 205 - 321
Target Start/End: Original strand, 5745641 - 5745757
Alignment:
Q  205 tttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgc 304  Q
    |||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  5745641 tttaattacacttttggtcctatcattttgaccaactcacgaaaatggtcatatcttttttaaatcgaacaaaatctttcttaaactatatgttttttgc 5745740  T
Q  305 agttttagtcctatctc 321  Q
    |||||||||| ||||||    
T  5745741 agttttagtcttatctc 5745757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 15712368 - 15712483
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||| ||||||| |    
T  15712368 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatattttttgta 15712467  T
Q  306 gttttagtcctatctc 321  Q
    ||||||||||||||||    
T  15712468 gttttagtcctatctc 15712483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 198 - 321
Target Start/End: Original strand, 786777 - 786901
Alignment:
Q  198 ataaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatg- 296  Q
    ||||||| ||||||||||||||| | || ||||||||||||||| ||||||||||||||| |||||||||||||||||||||  |||||||||||||||     
T  786777 ataaaggcttaattacacttttgatccttccattttgaccaactcacgaaaatggtcataccttttttaaatcgaacaaaattttccttaaactatatgt 786876  T
Q  297 ttttttgcagttttagtcctatctc 321  Q
    |||||||||||||||||||||||||    
T  786877 ttttttgcagttttagtcctatctc 786901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 206 - 321
Target Start/End: Complemental strand, 48248135 - 48248019
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtt-ttttgc 304  Q
    ||||||||||||||||| |||||||||||||||||| || ||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  48248135 ttaattacacttttggtcctaccattttgaccaactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttgc 48248036  T
Q  305 agttttagtcctatctc 321  Q
    ||||||||||| |||||    
T  48248035 agttttagtcccatctc 48248019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 200 - 320
Target Start/End: Original strand, 16081296 - 16081416
Alignment:
Q  200 aaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttt 299  Q
    ||||| ||||||||||||||||| || | ||||||||||||| | | |||||||| ||||||||||||||||||||||||| |||||||||||| |||||    
T  16081296 aaaggcttaattacacttttggtccttctattttgaccaactcatggaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatttgttt 16081395  T
Q  300 tttgcagttttagtcctatct 320  Q
    |||||||||||||||||||||    
T  16081396 tttgcagttttagtcctatct 16081416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 199 - 321
Target Start/End: Original strand, 11971330 - 11971456
Alignment:
Q  199 taaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtt 298  Q
    |||||| ||||||| ||||||||| |||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  11971330 taaaggcttaattatacttttggtcctaccattttgacctactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtt 11971429  T
Q  299 ttttg----cagttttagtcctatctc 321  Q
    ||||     ||||||||||||||||||    
T  11971430 ttttttttacagttttagtcctatctc 11971456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 206 - 321
Target Start/End: Complemental strand, 14311830 - 14311715
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    |||||||||||||| ||  ||||| ||||||||||| || ||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||    
T  14311830 ttaattacactttttgtcgtaccaatttgaccaactcacaaaaatggtcctatcttttttaaatcgaacaaaatcgtctttaaactatatgttttttgca 14311731  T
Q  306 gttttagtcctatctc 321  Q
    ||||||||| ||||||    
T  14311730 gttttagtcttatctc 14311715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 202 - 313
Target Start/End: Complemental strand, 26026865 - 26026754
Alignment:
Q  202 aggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttt 301  Q
    ||||||||||||||||||||| |||| |||||||| || | |||||||||||| |||||||| |||||||||||||| | ||||||||||||||||||||    
T  26026865 aggtttaattacacttttggtcctactattttgacaaattcacgaaaatggtcctatcttttataaatcgaacaaaaccatccttaaactatatgttttt 26026766  T
Q  302 tgcagttttagt 313  Q
    ||||||||||||    
T  26026765 tgcagttttagt 26026754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 206 - 320
Target Start/End: Original strand, 28687596 - 28687710
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    |||||||||||||||||  || |||||||||||||| |||||||||||  |||||||| |||||||||||||||| |||||||||||||| |||||||||    
T  28687596 ttaattacacttttggtcatatcattttgaccaactcacgaaaatggttctatcttttataaatcgaacaaaatcgtccttaaactatattttttttgca 28687695  T
Q  306 gttttagtcctatct 320  Q
    ||| |||||||||||    
T  28687696 gttctagtcctatct 28687710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 7732491 - 7732606
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||| ||||||| ||  |||||||| ||||| |||||| ||||| || || ||||||||||||||||||| ||||||||||||||||||||||||    
T  7732491 ttaattacatttttggtccttgcattttgatcaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 7732590  T
Q  306 gttttagtcctatctc 321  Q
    ||||||||||||||||    
T  7732591 gttttagtcctatctc 7732606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 206 - 321
Target Start/End: Complemental strand, 27245747 - 27245632
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||| |||||||||  ||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||| |||||||| ||||||| |||||||    
T  27245747 ttaattatacttttggtcttaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaattatatgtattttgca 27245648  T
Q  306 gttttagtcctatctc 321  Q
     |||||||| ||||||    
T  27245647 attttagtcatatctc 27245632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 206 - 300
Target Start/End: Original strand, 26047960 - 26048054
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtttt 300  Q
    ||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||    
T  26047960 ttaattacacttttgattctaccatttcgaccaactcacgaaaatggtcatatcttttttaaatcgaataaaattgtccttaaactatatgtttt 26048054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 206 - 319
Target Start/End: Original strand, 5333883 - 5333996
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||| | ||  |||||||||||||| |||||||||||| || || ||||||||||||||||||| ||| ||||||||||||||||||||    
T  5333883 ttaattacacttttgatccttgcattttgaccaactcacgaaaatggtcgtacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgca 5333982  T
Q  306 gttttagtcctatc 319  Q
    ||||||||| ||||    
T  5333983 gttttagtcatatc 5333996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 201 - 321
Target Start/End: Complemental strand, 16081847 - 16081727
Alignment:
Q  201 aaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtttt 300  Q
    |||| |||||||||| |||||| ||  |||||||||||||| |||||| || || || || ||||||||||||||||||| ||| |||||||||||||||    
T  16081847 aaggcttaattacacctttggtccttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcatccctaaactatatgtttt 16081748  T
Q  301 ttgcagttttagtcctatctc 321  Q
    |||||||||||||||||||||    
T  16081747 ttgcagttttagtcctatctc 16081727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 206 - 315
Target Start/End: Complemental strand, 5334362 - 5334253
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||||| ||  |||||||||||||| |||||||| ||| || || ||||||||||||||||||| ||| |||||||||| |||||||||    
T  5334362 ttaattacacttttggtcctcacattttgaccaactcacgaaaatagtcctacctcttttaaatcgaacaaaatcgtccctaaactatatattttttgca 5334263  T
Q  306 gttttagtcc 315  Q
    ||||||||||    
T  5334262 gttttagtcc 5334253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 204 - 320
Target Start/End: Complemental strand, 28688043 - 28687928
Alignment:
Q  204 gtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttg 303  Q
    ||||||||||| ||||||| ||  |||||||||||||| |||||| || ||||| || ||||||||||||||||||| ||| ||||||||||||||||||    
T  28688043 gtttaattaca-ttttggtccttgcattttgaccaactcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttg 28687945  T
Q  304 cagttttagtcctatct 320  Q
    || ||||||||||||||    
T  28687944 cacttttagtcctatct 28687928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 204 - 321
Target Start/End: Original strand, 26026318 - 26026436
Alignment:
Q  204 gtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatg-tttttt 302  Q
    ||||||||||||||||||| ||   |||||||||| || |||||| |||||||| || ||||||||||||||||||| ||| ||||||||||| ||||||    
T  26026318 gtttaattacacttttggtccttgtattttgaccagctcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccataaactatatgttttttt 26026417  T
Q  303 gcagttttagtcctatctc 321  Q
    |||||||||||| ||||||    
T  26026418 gcagttttagtcttatctc 26026436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 27245206 - 27245322
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatg-ttttttgc 304  Q
    ||||||||||||||||| ||  |||||||||||||| |||||| ||||| || || ||||||||||||||||||| |||  |||| ||||| ||||||||    
T  27245206 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccccaaaccatatgtttttttgc 27245305  T
Q  305 agttttagtcctatctc 321  Q
    |||||||||||||||||    
T  27245306 agttttagtcctatctc 27245322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 206 - 321
Target Start/End: Complemental strand, 39388811 - 39388695
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtt-ttttgc 304  Q
    ||||||||||||||||| ||  |||||||||||||| |||||| | ||| || || ||||||||||||||||||| ||  ||||||||||||| ||||||    
T  39388811 ttaattacacttttggtccttgcattttgaccaactcacgaaatttgtcctacctcttttaaatcgaacaaaatcgtctctaaactatatgtttttttgc 39388712  T
Q  305 agttttagtcctatctc 321  Q
    |||||||||||||||||    
T  39388711 agttttagtcctatctc 39388695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 206 - 321
Target Start/End: Complemental strand, 9394272 - 9394158
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||||| ||  ||||||||||| || || ||||||||| || |||||| ||||||||||||| | ||| |||||||||| |||||||||    
T  9394272 ttaattacacttttggt-ctcgcattttgaccagctcacaaaaatggtcctacctttttcaaatcgaacaaaaccgtccctaaactatatattttttgca 9394174  T
Q  306 gttttagtcctatctc 321  Q
    ||||||||||||||||    
T  9394173 gttttagtcctatctc 9394158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 201 - 319
Target Start/End: Complemental strand, 2758246 - 2758128
Alignment:
Q  201 aaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtttt 300  Q
    |||| ||||||||||||||||| ||  |||||||  ||||| |||||||||||  || || ||||||||||||||||||| ||| |||||||||||||||    
T  2758246 aaggcttaattacacttttggtcctcgcattttgttcaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccataaactatatgtttt 2758147  T
Q  301 ttgcagttttagtcctatc 319  Q
    |||||| ||||||| ||||    
T  2758146 ttgcaggtttagtcatatc 2758128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 209 - 321
Target Start/End: Complemental strand, 35161342 - 35161229
Alignment:
Q  209 attacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtt-ttttgcagt 307  Q
    |||||||||||||| ||  |||||||||||||| ||| || ||||| || || ||||||||||||||||||| ||| ||||||||||||| |||||||||    
T  35161342 attacacttttggtccttgcattttgaccaactcacggaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttgcagt 35161243  T
Q  308 tttagtcctatctc 321  Q
    ||||||| ||||||    
T  35161242 tttagtcatatctc 35161229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 25637200 - 25637316
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatg-ttttttgc 304  Q
    ||||||||||||||||| ||  ||| |||||||||| | |||| ||||| || || ||||||||||||||||||| ||| ||||||||||| |||||||     
T  25637200 ttaattacacttttggtccttgcatattgaccaactcatgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttgt 25637299  T
Q  305 agttttagtcctatctc 321  Q
    |||||||||||||||||    
T  25637300 agttttagtcctatctc 25637316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 787333 - 787234
Alignment:
Q  202 aggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttt 301  Q
    ||||||||||||||||||||| ||   ||||||||||||| |||||||||||| || || ||||||||||||||||||| ||| |||||||| |||||||    
T  787333 aggtttaattacacttttggtgctcgtattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaactatttgttttt 787234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 201 - 321
Target Start/End: Complemental strand, 9181960 - 9181837
Alignment:
Q  201 aaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtt-- 298  Q
    |||| ||||||||||||||| | ||  |||||||||||| | |||||| || ||||| || ||||||||||||||||||| ||| |||||||||||||      
T  9181960 aaggcttaattacacttttgatccttgcattttgaccaattcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactatatgtttt 9181861  T
Q  299 -ttttgcagttttagtcctatctc 321  Q
     |||| ||||||||||||||||||    
T  9181860 tttttccagttttagtcctatctc 9181837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 206 - 321
Target Start/End: Complemental strand, 26048489 - 26048375
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||| | ||  | |||||||||||| |||||| ||||| || || ||||||||| ||||||||  |||||||||||||||| |||||||    
T  26048489 ttaattacacttttgttccttgcgttttgaccaactcacgaaattggtcctacctcttttaaatcaaacaaaattgtccttaaactatatgt-ttttgca 26048391  T
Q  306 gttttagtcctatctc 321  Q
    ||||||||| ||||||    
T  26048390 gttttagtcatatctc 26048375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 203 - 294
Target Start/End: Original strand, 35160653 - 35160746
Alignment:
Q  203 ggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcata--tcttttttaaatcgaacaaaatcctccttaaactata 294  Q
    |||||| ||||||||||||| |||||||||||||||||| |||||||||||||||  | ||||||||||||||| ||||| | |||||| ||||    
T  35160653 ggtttatttacacttttggtcctaccattttgaccaactcacgaaaatggtcatattttttttttaaatcgaactaaatcgttcttaaattata 35160746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 313
Target Start/End: Complemental strand, 34595320 - 34595208
Alignment:
Q  201 aaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat-atgttt 299  Q
    |||| ||||||||||||||||| ||  |||||||||||||| |||||||||||| |   | ||||||||||||||||||| ||| |||||||| ||| ||    
T  34595320 aaggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctgcatcttttaaatcgaacaaaatcgtccctaaactatcatg-tt 34595222  T
Q  300 tttgcagttttagt 313  Q
    ||||||||||||||    
T  34595221 tttgcagttttagt 34595208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 204 - 320
Target Start/End: Complemental strand, 11973947 - 11973831
Alignment:
Q  204 gtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttg 303  Q
    ||||||||||| ||||||| ||  ||||||||||||| ||||||| ||||  || || |||||||| |||||||||| ||| |||| || ||| ||||||    
T  11973947 gtttaattacatttttggtccttgcattttgaccaacgtacgaaattggttctacctcttttaaattgaacaaaatcgtccctaaattaaatggtttttg 11973848  T
Q  304 cagttttagtcctatct 320  Q
    |||||||||| ||||||    
T  11973847 cagttttagttctatct 11973831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 206 - 321
Target Start/End: Complemental strand, 24929851 - 24929731
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactata-----tgtttt 300  Q
    ||||||||| ||||||| ||  |||||||||||||| |||||| ||||| || || ||||||||| ||||||||| ||| |||||||||     | ||||    
T  24929851 ttaattacatttttggtccttgcattttgaccaactcacgaaattggtcttacctcttttaaatcaaacaaaatcgtccctaaactatatatattttttt 24929752  T
Q  301 ttgcagttttagtcctatctc 321  Q
    |||||||||||||||||||||    
T  24929751 ttgcagttttagtcctatctc 24929731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 193 - 321
Target Start/End: Original strand, 48247577 - 48247709
Alignment:
Q  193 ataaaataaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaacta 292  Q
    |||||||  ||| ||||||||||||||||| ||  |||||||| ||||| |||||| ||||| || || ||||||||| ||||||||| ||| |||| ||    
T  48247577 ataaaatttaggcttaattacacttttggtccttgcattttgatcaactcacgaaattggtcctacctcttttaaatcaaacaaaatcgtccctaaagta 48247676  T
Q  293 ta----tgttttttgcagttttagtcctatctc 321  Q
    ||    | |||||||||||||||||| ||||||    
T  48247677 tatattttttttttgcagttttagtcatatctc 48247709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 321
Target Start/End: Complemental strand, 5746188 - 5746067
Alignment:
Q  201 aaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtt-- 298  Q
    |||| ||||||||||||||||| ||  ||||||||| |||| |||||| || || |  || ||||||||||||||||| | ||| |||||||||||||      
T  5746188 aaggcttaattacacttttggtccttgcattttgactaactcacgaaattgatc-tgcctcttttaaatcgaacaaaaccgtccataaactatatgtttt 5746090  T
Q  299 ttttgcagttttagtcctatctc 321  Q
    ||||||| |||||||| ||||||    
T  5746089 ttttgcaattttagtcttatctc 5746067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 268
Target Start/End: Complemental strand, 40669754 - 40669689
Alignment:
Q  203 ggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaa 268  Q
    |||||||||||||||||| | || ||||||||||||||| ||||||||| |||||  |||||||||    
T  40669754 ggtttaattacacttttgatccttccattttgaccaactcacgaaaatgatcatactttttttaaa 40669689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 314
Target Start/End: Original strand, 45815342 - 45815454
Alignment:
Q  201 aaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat-atg-tt 298  Q
    |||| ||||||||||||||||| ||  ||||||||||| ||   ||||||||||||  || ||| ||||||||||||| | ||| |||||||| ||| ||    
T  45815342 aaggcttaattacacttttggtccttgcattttgaccagct---gaaaatggtcatgcctctttcaaatcgaacaaaaccgtccctaaactatcatgttt 45815438  T
Q  299 ttttgcagttttagtc 314  Q
    ||||||||||||||||    
T  45815439 ttttgcagttttagtc 45815454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 317
Target Start/End: Original strand, 49064028 - 49064148
Alignment:
Q  197 aataaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat-at 295  Q
    |||||||| ||||||||||||||||| ||   |||||||||| || |||||||||||  |  || ||| |||| |||||||||| ||| |||||||| ||    
T  49064028 aataaaggcttaattacacttttggtcctcgtattttgaccagctcacgaaaatggtattgcctctttcaaatagaacaaaatcttccataaactatcat 49064127  T
Q  296 gttttttgcagttttagtccta 317  Q
    | |||||||| |||||||||||    
T  49064128 g-tttttgcacttttagtccta 49064148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 194 - 291
Target Start/End: Complemental strand, 39137088 - 39136991
Alignment:
Q  194 taaaataaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaact 291  Q
    |||||| |||| ||||||||||||||| | ||   |||||||||  || |||||||||||| |  || ||||||||||||||||||| ||| ||||||    
T  39137088 taaaatcaaggcttaattacacttttgatcctcgtattttgacccgctcacgaaaatggtcctgcctcttttaaatcgaacaaaatcgtccataaact 39136991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 317
Target Start/End: Original strand, 4477705 - 4477816
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat-atgttttttgc 304  Q
    ||||||||||| ||| | ||  |||||||||||| | ||||||||||||    || |||||||| ||| |||||| ||| |||||||| ||| |||||||    
T  4477705 ttaattacactattgatccttacattttgaccaattcacgaaaatggtcccgcctcttttaaattgaataaaatcgtccctaaactatcatg-tttttgc 4477803  T
Q  305 agttttagtccta 317  Q
    |||||||||||||    
T  4477804 agttttagtccta 4477816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 317
Target Start/End: Original strand, 9393739 - 9393850
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat-atgttttttgc 304  Q
    ||||||||||||||| | ||  |||||||| || || |||||||| ||| |  || ||| ||||||||||||| | ||| |||||||| |||||||||||    
T  9393739 ttaattacacttttgatcctcgcattttgatcagctcacgaaaattgtcttgcctctttcaaatcgaacaaaaccgtcc-taaactatcatgttttttgc 9393837  T
Q  305 agttttagtccta 317  Q
     ||||||||||||    
T  9393838 tgttttagtccta 9393850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 14311318 - 14311434
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatg-ttttttgc 304  Q
    ||||||| | ||||||| ||  |||||| ||||||| |  ||| |||| ||| || |||||||| ||| |||||| ||| ||||||||||| |||||| |    
T  14311318 ttaattatatttttggtacttgcattttaaccaactcataaaattggttatacctcttttaaattgaataaaatcgtccctaaactatatgtttttttac 14311417  T
Q  305 agttttagtcctatctc 321  Q
    ||||||| |||||||||    
T  14311418 agttttaatcctatctc 14311434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 317
Target Start/End: Original strand, 39136689 - 39136800
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat-atgttttttgc 304  Q
    ||||||||||||||| | ||  ||||||||||| || |||||||||||  |  || ||| ||||||||||||||| ||| |||||||| ||| ||| |||    
T  39136689 ttaattacacttttgatccttgcattttgaccagctcacgaaaatggttctgactctttcaaatcgaacaaaatcgtccctaaactatcatg-tttatgc 39136787  T
Q  305 agttttagtccta 317  Q
    | |||||||||||    
T  39136788 acttttagtccta 39136800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 314
Target Start/End: Complemental strand, 35579428 - 35579320
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat-atgttttttgc 304  Q
    ||||||||||||||| | ||  |||||||| || || ||||||||| | ||  || ||| ||||| ||||||| | |||| ||||||| |||||||||||    
T  35579428 ttaattacacttttgatcctcgcattttgatcagctcacgaaaatgattatgcctctttcaaatcaaacaaaaccgtcct-aaactatcatgttttttgc 35579330  T
Q  305 agttttagtc 314  Q
    ||||||||||    
T  35579329 agttttagtc 35579320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 317
Target Start/End: Original strand, 35578902 - 35579013
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat-atgttttttgc 304  Q
    |||||||||||||||||  |  ||||||||||| || || ||||||||| |  |  ||| ||||||||||||| ||  | |||||||| |||||||||||    
T  35578902 ttaattacacttttggtcattgcattttgaccagctcacaaaaatggtcctgccactttcaaatcgaacaaaa-ccgtcataaactatcatgttttttgc 35579000  T
Q  305 agttttagtccta 317  Q
    ||||||| |||||    
T  35579001 agttttaatccta 35579013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 103; Significance: 3e-51; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 195 - 321
Target Start/End: Complemental strand, 38008505 - 38008379
Alignment:
Q  195 aaaataaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactata 294  Q
    |||| ||||| ||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  38008505 aaaaaaaaggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactata 38008406  T
Q  295 tgttttttgcagttttagtcctatctc 321  Q
    |||||||||||||||||||||||||||    
T  38008405 tgttttttgcagttttagtcctatctc 38008379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 194 - 321
Target Start/End: Original strand, 20127727 - 20127855
Alignment:
Q  194 taaaataaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat 293  Q
    ||||| ||||| ||||||||||||||||| |||||||||||||||| | |||||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  20127727 taaaaaaaaggcttaattacacttttggtcctaccattttgaccaattcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactat 20127826  T
Q  294 atg-ttttttgcagttttagtcctatctc 321  Q
    ||| |||||||||||||||||||||||||    
T  20127827 atgtttttttgcagttttagtcctatctc 20127855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 199 - 321
Target Start/End: Original strand, 11539633 - 11539756
Alignment:
Q  199 taaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatg-t 297  Q
    |||||| ||||||||||||||||| |||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||| ||||||||||||||| |    
T  11539633 taaaggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctattttttttaaatcgaacaaaatcgtccttaaactatatgtt 11539732  T
Q  298 tttttgcagttttagtcctatctc 321  Q
    ||||||||||||||||||||||||    
T  11539733 tttttgcagttttagtcctatctc 11539756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 195 - 313
Target Start/End: Original strand, 5560043 - 5560161
Alignment:
Q  195 aaaataaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactata 294  Q
    ||||| |||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||    
T  5560043 aaaattaaggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcatatcttttttaaattgaacaaaatcgtccttaaactata 5560142  T
Q  295 tgttttttgcagttttagt 313  Q
    | |||||||||||||||||    
T  5560143 tattttttgcagttttagt 5560161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 202 - 321
Target Start/End: Original strand, 13315492 - 13315614
Alignment:
Q  202 aggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatg---tt 298  Q
    |||||||||||||||||| || |||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||   ||    
T  13315492 aggtttaattacactttttgtcctaccattttgaccaactcatgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgttttt 13315591  T
Q  299 ttttgcagttttagtcctatctc 321  Q
    |||||||||||||||||||||||    
T  13315592 ttttgcagttttagtcctatctc 13315614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 195 - 321
Target Start/End: Complemental strand, 4809433 - 4809307
Alignment:
Q  195 aaaataaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactata 294  Q
    |||| ||||| ||||||||||||||||| ||||||||||||| |||| |||||||||||| ||| |||||||||| ||||||| || |||||||||||||    
T  4809433 aaaaaaaaggcttaattacacttttggtcctaccattttgactaactcacgaaaatggtcctatgttttttaaattgaacaaagtcgtccttaaactata 4809334  T
Q  295 tgttttttgcagttttagtcctatctc 321  Q
    |||||||||||||||||||||||||||    
T  4809333 tgttttttgcagttttagtcctatctc 4809307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 206 - 311
Target Start/End: Complemental strand, 4356299 - 4356194
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||||| ||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4356299 ttaattacacttttggtcctatcattttgaccaactcacgataatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 4356200  T
Q  306 gtttta 311  Q
    ||||||    
T  4356199 gtttta 4356194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 177 - 321
Target Start/End: Complemental strand, 43160583 - 43160438
Alignment:
Q  177 cataataccaaattcgataaaataaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaa 276  Q
    ||||||| || ||||| || || ||||| ||||||||||||| ||| ||||||||||||| |||| |||||||||||| ||||||||||||||||||| |    
T  43160583 cataataacatattcgttagaaaaaaggcttaattacactttaggtcctaccattttgacaaactcacgaaaatggtcctatcttttttaaatcgaacta 43160484  T
Q  277 aatcctccttaaactatatgtt-ttttgcagttttagtcctatctc 321  Q
    |||| ||||||||||||||||| |||||||||||||||||||||||    
T  43160483 aatcgtccttaaactatatgtttttttgcagttttagtcctatctc 43160438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 206 - 321
Target Start/End: Complemental strand, 33921155 - 33921039
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatg-ttttttgc 304  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| || |||||||| ||| ||||||||    
T  33921155 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtctttaaactaaatgtttttttgc 33921056  T
Q  305 agttttagtcctatctc 321  Q
    |||||||||||||||||    
T  33921055 agttttagtcctatctc 33921039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 62960 - 63075
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    |||||||||||| |||| || ||||||||||||||| |||||||||||| || |||||| ||||||||||||||| ||||||||||||||||||||||||    
T  62960 ttaattacacttatggtccttccattttgaccaactcacgaaaatggtcctacctttttaaaatcgaacaaaatcgtccttaaactatatgttttttgca 63059  T
Q  306 gttttagtcctatctc 321  Q
    ||||||||||||||||    
T  63060 gttttagtcctatctc 63075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 202 - 321
Target Start/End: Complemental strand, 15551222 - 15551102
Alignment:
Q  202 aggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtt-tt 300  Q
    ||||||||||||||||||||  |||||||||||||||||| || ||||||||||||| ||||||||||||||||||||| |||||||  |||||||| ||    
T  15551222 aggtttaattacacttttggccctaccattttgaccaactcacaaaaatggtcatatattttttaaatcgaacaaaatcgtccttaagttatatgttttt 15551123  T
Q  301 ttgcagttttagtcctatctc 321  Q
    |||||||||||||||||||||    
T  15551122 ttgcagttttagtcctatctc 15551102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 42192243 - 42192358
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||||| ||  |||||||||||||| |||||||||||| || || ||||||||||||||||||| ||| ||||||||||||||||||||    
T  42192243 ttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgca 42192342  T
Q  306 gttttagtcctatctc 321  Q
    ||||||||||||||||    
T  42192343 gttttagtcctatctc 42192358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 200 - 321
Target Start/End: Original strand, 6949448 - 6949570
Alignment:
Q  200 aaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatg-tt 298  Q
    ||||| ||||||||| ||||||| ||| ||||||||| |||| |||||||||||| ||||||||||||||||||||||||| ||||| ||||||||| ||    
T  6949448 aaaggcttaattacatttttggtcctatcattttgactaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtcctttaactatatgttt 6949547  T
Q  299 ttttgcagttttagtcctatctc 321  Q
    |||||||||||||||||||||||    
T  6949548 ttttgcagttttagtcctatctc 6949570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 4355758 - 4355873
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||||| ||  |||||||||| ||| |||||| |||||||| || ||||||||||||||||||| ||| ||||||||||||||||||||    
T  4355758 ttaattacacttttggtccttgcattttgacctactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgca 4355857  T
Q  306 gttttagtcctatctc 321  Q
    ||||||||||||||||    
T  4355858 gttttagtcctatctc 4355873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 201 - 321
Target Start/End: Original strand, 16952933 - 16953055
Alignment:
Q  201 aaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatg--tt 298  Q
    |||| ||||||| ||||||||| |||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||| |||||||||||||||  ||    
T  16952933 aaggcttaattatacttttggtcctaccattttgaccaactcacgaaaattgtcttatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 16953032  T
Q  299 ttttgcagttttagtcctatctc 321  Q
    |||||| ||||||||| ||||||    
T  16953033 ttttgcggttttagtcatatctc 16953055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 201 - 321
Target Start/End: Original strand, 17060904 - 17061026
Alignment:
Q  201 aaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatg--tt 298  Q
    |||| ||||||| ||||||||| |||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||| |||||||||||||||  ||    
T  17060904 aaggcttaattatacttttggtcctaccattttgaccaactcacgaaaattgtcttatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 17061003  T
Q  299 ttttgcagttttagtcctatctc 321  Q
    |||||| ||||||||| ||||||    
T  17061004 ttttgcggttttagtcatatctc 17061026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 199 - 321
Target Start/End: Complemental strand, 44220195 - 44220073
Alignment:
Q  199 taaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtt 298  Q
    |||||| |||||||||||||| || ||  |||||||||||||| ||||||||||||||| |||||||||||| ||||||||| ||| |||||||||||||    
T  44220195 taaaggcttaattacactttttgtcctcgcattttgaccaactcacgaaaatggtcataccttttttaaatcaaacaaaatcgtccctaaactatatgtt 44220096  T
Q  299 ttttgcagttttagtcctatctc 321  Q
    ||||| |||||||||| ||||||    
T  44220095 ttttgtagttttagtcatatctc 44220073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 207 - 321
Target Start/End: Complemental strand, 16175892 - 16175777
Alignment:
Q  207 taattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtt-ttttgca 305  Q
    |||||||||||||||| ||  |||||| ||||||| |||||| |||||||| || ||||||||||||||||||| ||||||||||||||||| |||||||    
T  16175892 taattacacttttggtccttacatttttaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccttaaactatatgtttttttgca 16175793  T
Q  306 gttttagtcctatctc 321  Q
    ||||||||||||||||    
T  16175792 gttttagtcctatctc 16175777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 44219647 - 44219762
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||||| || ||||||||| ||||| || |||||| || || |||||||||||||||||||||  |||||||| |||||||||||||||    
T  44219647 ttaattacacttttggtccttccattttgatcaactcacaaaaatgatcctaccttttttaaatcgaacaaaattgtccttaaattatatgttttttgca 44219746  T
Q  306 gttttagtcctatctc 321  Q
    ||||||||||||||||    
T  44219747 gttttagtcctatctc 44219762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 196 - 320
Target Start/End: Complemental strand, 9330348 - 9330223
Alignment:
Q  196 aaataaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatat 295  Q
    ||||||| ||||||||||||||||||| ||  |||||||||||||| |||||| | |||||| || ||||||||||||||||||| |||  |||||||||    
T  9330348 aaataaaagtttaattacacttttggtccttgcattttgaccaactcacgaaatttgtcatacctcttttaaatcgaacaaaatcgtccccaaactatat 9330249  T
Q  296 gtt-ttttgcagttttagtcctatct 320  Q
    ||| ||||||||||||||||||||||    
T  9330248 gtttttttgcagttttagtcctatct 9330223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 195 - 319
Target Start/End: Complemental strand, 42192797 - 42192672
Alignment:
Q  195 aaaataaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactata 294  Q
    |||||||||| ||||||||||||||||| ||  |||||||||||||| |||||||||||| || || ||||||||||||||||||| ||| ||||||| |    
T  42192797 aaaataaaggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctaaactaga 42192698  T
Q  295 tg-ttttttgcagttttagtcctatc 319  Q
    || |||||||||||||||||| ||||    
T  42192697 tgtttttttgcagttttagtcatatc 42192672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 201 - 313
Target Start/End: Original strand, 649525 - 649637
Alignment:
Q  201 aaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtttt 300  Q
    |||| ||||||||||||||||| ||  ||| ||||||||||||||||| ||||| || || ||||||||||||||||||| ||| |||||||||||||||    
T  649525 aaggcttaattacacttttggtccttgcatcttgaccaacttacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttt 649624  T
Q  301 ttgcagttttagt 313  Q
    |||||||||||||    
T  649625 ttgcagttttagt 649637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 206 - 321
Target Start/End: Complemental strand, 20128280 - 20128165
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||||| ||  |||||| ||||||| |||||| ||||| || || ||||||||| ||||||||| ||||||||||||||||||||||||    
T  20128280 ttaattacacttttggtccttgcatttttaccaactcacgaaattggtcctacctcttttaaatcaaacaaaatcgtccttaaactatatgttttttgca 20128181  T
Q  306 gttttagtcctatctc 321  Q
     |||||||||||||||    
T  20128180 attttagtcctatctc 20128165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 33920615 - 33920730
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||| ||||||| ||  |||||||||||||| |||||| || ||||| || ||||||||||||||||||| ||| ||||||||||| ||||||||    
T  33920615 ttaattacatttttggtccttgcattttgaccaactcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactatatgatttttgca 33920714  T
Q  306 gttttagtcctatctc 321  Q
    ||||||||||||||||    
T  33920715 gttttagtcctatctc 33920730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 195 - 317
Target Start/End: Complemental strand, 31797331 - 31797209
Alignment:
Q  195 aaaataaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactata 294  Q
    |||| ||||| ||||||||||||||||| ||  ||||||||||| || ||||||||||||||  || ||| ||||||||||||| | ||| |||||||||    
T  31797331 aaaaaaaaggcttaattacacttttggtcctcacattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtccctaaactata 31797232  T
Q  295 tgttttttgcagttttagtccta 317  Q
    |||||||||||||||||||||||    
T  31797231 tgttttttgcagttttagtccta 31797209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 206 - 314
Target Start/End: Complemental strand, 11540181 - 11540073
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||| |||||||||  |  |||||||||||||| |||||||||||| || || ||||||||||||||||||| ||| ||||||||||||||||||||    
T  11540181 ttaattatacttttggtcatcgcattttgaccaactcacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccataaactatatgttttttgca 11540082  T
Q  306 gttttagtc 314  Q
    |||||||||    
T  11540081 gttttagtc 11540073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 38007953 - 38008069
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatg-ttttttgc 304  Q
    ||||||||||||||||| ||  |||||||||||||| |||||| ||||| || || ||||||||||||||||||| ||| ||||||||||| ||||||||    
T  38007953 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttgc 38008052  T
Q  305 agttttagtcctatctc 321  Q
    |||||||||| ||||||    
T  38008053 agttttagtcatatctc 38008069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 206 - 321
Target Start/End: Complemental strand, 13399962 - 13399848
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    |||||| || |||| || |||||||||||||||||| |||||||||||| ||| | ||||||||||||||||||  |||||||||||||| |||||||||    
T  13399962 ttaattgcaattttagtcctaccattttgaccaactcacgaaaatggtc-tatttcttttaaatcgaacaaaattgtccttaaactatatattttttgca 13399864  T
Q  306 gttttagtcctatctc 321  Q
    ||||||||| ||||||    
T  13399863 gttttagtcatatctc 13399848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 206 - 321
Target Start/End: Complemental strand, 43216252 - 43216137
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    |||||||||||||| || ||  | |||||||||||| |||||| ||||| || || ||||||||||||||||||| ||| |||||||||| |||||||||    
T  43216252 ttaattacacttttagtccttgcgttttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatattttttgca 43216153  T
Q  306 gttttagtcctatctc 321  Q
    ||||||||||||||||    
T  43216152 gttttagtcctatctc 43216137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 206 - 320
Target Start/End: Original strand, 4808882 - 4808996
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||| |||| |||||  |||||||||||||| |||||| || || || || ||||||||||||||||||| ||| |||||||||||||||||| |    
T  4808882 ttaattacatttttagttcttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccataaactatatgttttttgta 4808981  T
Q  306 gttttagtcctatct 320  Q
    |||||||||||||||    
T  4808982 gttttagtcctatct 4808996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 202 - 318
Target Start/End: Original strand, 15550672 - 15550789
Alignment:
Q  202 aggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatg-tttt 300  Q
    ||||||||||||||||||| | ||  |||| ||||||||| |||||| ||||| || || ||||||||||||||||||| ||| ||||||||||| ||||    
T  15550672 aggtttaattacacttttgatccttgcattctgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttttt 15550771  T
Q  301 ttgcagttttagtcctat 318  Q
    ||||||||||||||||||    
T  15550772 ttgcagttttagtcctat 15550789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 206 - 321
Target Start/End: Complemental strand, 16953477 - 16953362
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||||| ||  |||||||||||||| | |||| ||||| || || |||||||||||||||||   ||| |||| |||||||||||||||    
T  16953477 ttaattacacttttggtccttgcattttgaccaactcatgaaattggtcctacctcttttaaatcgaacaaaaatgtccctaaagtatatgttttttgca 16953378  T
Q  306 gttttagtcctatctc 321  Q
    ||||||||||||||||    
T  16953377 gttttagtcctatctc 16953362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 194 - 321
Target Start/End: Original strand, 32418150 - 32418275
Alignment:
Q  194 taaaataaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat 293  Q
    |||||| |||| |||||||||||| |||| ||  |||||||||||||| |||||| ||||| || || |||  |||||||||||||| ||| ||||||||    
T  32418150 taaaattaaggcttaattacacttatggtccttgcattttgaccaactcacgaaattggtcctacctcttt--aatcgaacaaaatcgtccctaaactat 32418247  T
Q  294 atgttttttgcagttttagtcctatctc 321  Q
    || |||||||||||||||||| ||||||    
T  32418248 atattttttgcagttttagtcatatctc 32418275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 43160012 - 43160128
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactata-tgttttttgc 304  Q
    ||||||||| ||||||| ||  |||||||| ||||| |||||| |||||||| || ||||||||||||||||||| ||| |||||||||   ||||||||    
T  43160012 ttaattacatttttggtccttgcattttgatcaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatacatttttttgc 43160111  T
Q  305 agttttagtcctatctc 321  Q
    |||||||||||||||||    
T  43160112 agttttagtcctatctc 43160128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 192 - 320
Target Start/End: Complemental strand, 63521 - 63387
Alignment:
Q  192 gataaaataaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaact 291  Q
    ||||||| | ||||||||||| | ||||||| ||   ||||||||||||| |||||||||||| ||||| ||||||||| ||||||||| ||| ||||||    
T  63521 gataaaaaataggtttaattatatttttggtccttgtattttgaccaactcacgaaaatggtcttatctcttttaaatcaaacaaaatcgtccctaaact 63422  T
Q  292 atatgtt------ttttgcagttttagtcctatct 320  Q
    |||||||      ||||||||||||||||||||||    
T  63421 atatgttttttttttttgcagttttagtcctatct 63387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 206 - 285
Target Start/End: Complemental strand, 649880 - 649801
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctcct 285  Q
    ||||||||||||||||| ||| |||||||||||||| |||||||||||| ||| ||||||||||||||||||||| ||||    
T  649880 ttaattacacttttggtcctatcattttgaccaactcacgaaaatggtcctattttttttaaatcgaacaaaatcgtcct 649801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 206 - 321
Target Start/End: Complemental strand, 32418689 - 32418574
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||| ||||||||| ||| |||||||||||| | |||||| || |  || || ||||||||||||||||||| |||||||||||||| |||||||||    
T  32418689 ttaattatacttttggtcctatcattttgaccaattcacgaaattgattctacctcttttaaatcgaacaaaatcgtccttaaactatatattttttgca 32418590  T
Q  306 gttttagtcctatctc 321  Q
    |||||| || ||||||    
T  32418589 gttttaatcttatctc 32418574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 206 - 321
Target Start/End: Complemental strand, 6949987 - 6949870
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactata--tgttttttg 303  Q
    ||||||||||||||||| ||  |||||||||||||| |||||| ||||| ||  | |||||||| |||||||||| ||| |||||||||  | |||||||    
T  6949987 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacatcttttaaatagaacaaaatcgtccctaaactatattttttttttg 6949888  T
Q  304 cagttttagtcctatctc 321  Q
    ||||||||||||||||||    
T  6949887 cagttttagtcctatctc 6949870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 13399462 - 13399540
Alignment:
Q  243 acgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgcagttttagtcctatctc 321  Q
    |||||| |||||||| || |||||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  13399462 acgaaattggtcatacctcttttaaatggaacaaaatcgtccctaaactatatgttttttgcagttttagtcctatctc 13399540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 202 - 310
Target Start/End: Original strand, 20495192 - 20495301
Alignment:
Q  202 aggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat-atgtttt 300  Q
    |||||||||| |||||||||||||  |||||||||||||| ||||||||| ||||  || ||||||||| ||||||||| ||| |||||||| || ||||    
T  20495192 aggtttaatttcacttttggttctcgcattttgaccaactcacgaaaatgatcatgcctcttttaaatctaacaaaatcgtccctaaactatcatatttt 20495291  T
Q  301 ttgcagtttt 310  Q
    ||||| ||||    
T  20495292 ttgcactttt 20495301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 206 - 314
Target Start/End: Complemental strand, 25336143 - 25336034
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatat-gttttttgc 304  Q
    ||||||||||||||||| ||  |||||||||||||| |||||| ||||| ||  | ||||||||||||||||||| ||| |||| |||||  ||||||||    
T  25336143 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacttcttttaaatcgaacaaaatcgtccctaaattatatatttttttgc 25336044  T
Q  305 agttttagtc 314  Q
    ||||||||||    
T  25336043 agttttagtc 25336034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 206 - 295
Target Start/End: Complemental strand, 24140217 - 24140128
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatat 295  Q
    ||||||||||||||| | ||  ||| |||||||||| |||||||||||| || |||||||||||| ||||||||| ||| ||||||||||    
T  24140217 ttaattacacttttgttcctcgcatcttgaccaactcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtccataaactatat 24140128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 206 - 317
Target Start/End: Complemental strand, 28143572 - 28143461
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat-atgttttttgc 304  Q
    |||||| |||||||||| ||  ||||||||||| || |||||||||||| |  || ||| ||||||||||||||| ||| |||||||| ||| |||||||    
T  28143572 ttaatttcacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcaaatcgaacaaaatcgtccctaaactatcatg-tttttgc 28143474  T
Q  305 agttttagtccta 317  Q
    |||||||||||||    
T  28143473 agttttagtccta 28143461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 202 - 265
Target Start/End: Original strand, 9329911 - 9329974
Alignment:
Q  202 aggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatctttttt 265  Q
    ||||||||||||||||||||| |||| ||||||||||||| || ||||||||| ||||||||||    
T  9329911 aggtttaattacacttttggtcctacaattttgaccaactcacaaaaatggtcctatctttttt 9329974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 240 - 311
Target Start/End: Original strand, 5035900 - 5035972
Alignment:
Q  240 cttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat-atgttttttgcagtttta 311  Q
    ||||||||||||||| | ||||||||||||||||||||| | ||| |||||||| || |||||||||||||||    
T  5035900 cttacgaaaatggtcctgtcttttttaaatcgaacaaaaccgtccctaaactatcatattttttgcagtttta 5035972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 206 - 317
Target Start/End: Complemental strand, 14942389 - 14942275
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat-atg--tttttt 302  Q
    |||||||||||||||||  |  ||||||||||| || |||||||||||| | ||| ||| ||||||||||||||  ||| |||| ||| |||  ||||||    
T  14942389 ttaattacacttttggtcttcgcattttgaccagctcacgaaaatggtcttgtctctttcaaatcgaacaaaattgtccataaattatcatgtttttttt 14942290  T
Q  303 gcagttttagtccta 317  Q
    |||||||||||||||    
T  14942289 gcagttttagtccta 14942275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 321
Target Start/End: Complemental strand, 5561023 - 5560978
Alignment:
Q  276 aaatcctccttaaactatatgttttttgcagttttagtcctatctc 321  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||    
T  5561023 aaatcgtccctaaactatatgttttttgcagttttagtcctatctc 5560978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 202 - 302
Target Start/End: Original strand, 22445638 - 22445736
Alignment:
Q  202 aggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttt 301  Q
    ||||||||||||||||||||| ||  |||||||| |||||||  ||| |||||||| | || ||||||||||||||| | |||||||| || ||||||||    
T  22445638 aggtttaattacacttttggt-cttgcattttgatcaacttataaaattggtcataccattattaaatcgaacaaaaccgtccttaaatta-atgttttt 22445735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 9329829 - 9329892
Alignment:
Q  202 aggtttaattacacttttggttctaccattttga-ccaacttacgaaaatggtcatatcttttt 264  Q
    ||||||||||||||||||||| ||| |||||||| | |||| ||||||||||| ||||||||||    
T  9329829 aggtttaattacacttttggtcctatcattttgatctaactcacgaaaatggttatatcttttt 9329892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 278
Target Start/End: Complemental strand, 3824256 - 3824179
Alignment:
Q  201 aaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaa 278  Q
    |||||||||||| |||||||||  |  |||||| ||||||| |||||| |||||||  | ||||||||||||||||||    
T  3824256 aaggtttaattatacttttggtcatcgcattttaaccaactcacgaaattggtcatgccctttttaaatcgaacaaaa 3824179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 317
Target Start/End: Complemental strand, 2190597 - 2190506
Alignment:
Q  228 cattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat-atg-ttttttgcagttttagtccta 317  Q
    ||||||||||| || |||||| ||||| |  |||||| ||||||||||||||| ||| |||| ||| | | |||||||||||||||||||||    
T  2190597 cattttgaccagctcacgaaattggtcctgcctttttcaaatcgaacaaaatcgtccctaaattatcacgcttttttgcagttttagtccta 2190506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 100; Significance: 2e-49; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 34789385 - 34789500
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  34789385 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 34789484  T
Q  306 gttttagtcctatctc 321  Q
    ||||||||||||||||    
T  34789485 gttttagtcctatctc 34789500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 206 - 321
Target Start/End: Complemental strand, 14440371 - 14440256
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  14440371 ttaattatacttttggtcctaccattttgaccaacttacgaaaatggtcctatcttttttaaatcgaacaaaatcatccttaaactatatgttttttgca 14440272  T
Q  306 gttttagtcctatctc 321  Q
    ||||||||| ||||||    
T  14440271 gttttagtcatatctc 14440256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 206 - 321
Target Start/End: Complemental strand, 28465624 - 28465509
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  28465624 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 28465525  T
Q  306 gttttagtcctatctc 321  Q
     |||||||||||||||    
T  28465524 attttagtcctatctc 28465509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 206 - 321
Target Start/End: Complemental strand, 56077867 - 56077752
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||| ||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  56077867 ttaattacatttttggtcctaccattttgaccaactcacgaaaatggtcttatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 56077768  T
Q  306 gttttagtcctatctc 321  Q
    ||||||||||||||||    
T  56077767 gttttagtcctatctc 56077752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 206 - 321
Target Start/End: Complemental strand, 54441112 - 54440997
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||||| |||||||||||| || || |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  54441112 ttaattacacttttggtcctaccattttgatcagctcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 54441013  T
Q  306 gttttagtcctatctc 321  Q
    ||||||||||||||||    
T  54441012 gttttagtcctatctc 54440997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 192 - 321
Target Start/End: Original strand, 12593013 - 12593142
Alignment:
Q  192 gataaaataaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaact 291  Q
    |||||||  |||| ||||||||||||||||| |||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  12593013 gataaaaacaaggcttaattacacttttggtcctaccagtttgaccaactcacgaaaatggtcataccttttttaaatcgaacaaaatcgtccttaaact 12593112  T
Q  292 atatgttttttgcagttttagtcctatctc 321  Q
    |||||||||||||| ||||| |||||||||    
T  12593113 atatgttttttgcaattttaatcctatctc 12593142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 200 - 321
Target Start/End: Original strand, 26974280 - 26974402
Alignment:
Q  200 aaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatg-tt 298  Q
    ||||| ||||||||||||||||| |||||||||| || |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||    
T  26974280 aaaggcttaattacacttttggtcctaccattttaacaaactcacgaaaatggtcatatcttttttaaatcgaacaaaatcgtccttaaactatatgttt 26974379  T
Q  299 ttttgcagttttagtcctatctc 321  Q
    |||| ||||||||||||||||||    
T  26974380 ttttacagttttagtcctatctc 26974402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 21034238 - 21034354
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatg-ttttttgc 304  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||| |    
T  21034238 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttac 21034337  T
Q  305 agttttagtcctatctc 321  Q
    |||||||||| ||||||    
T  21034338 agttttagtcatatctc 21034354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 193 - 320
Target Start/End: Complemental strand, 45839105 - 45838976
Alignment:
Q  193 ataaaataaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaacta 292  Q
    |||||| ||||||||||||||||||||||| |||| ||||||||||||| |||||| ||||| ||||||||||||||||||||||||| |||||||||||    
T  45839105 ataaaaaaaaggtttaattacacttttggtcctactattttgaccaactcacgaaa-tggtcctatcttttttaaatcgaacaaaatcgtccttaaacta 45839007  T
Q  293 tatgtt---ttttgcagttttagtcctatct 320  Q
    ||||||   ||||||||||||||||||||||    
T  45839006 tatgtttttttttgcagttttagtcctatct 45838976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 202 - 321
Target Start/End: Original strand, 28166003 - 28166122
Alignment:
Q  202 aggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttt 301  Q
    ||||||||||| | ||||||| |||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||  |||||||||||||| |||||    
T  28166003 aggtttaattaaatttttggtcctactattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaattgtccttaaactatattttttt 28166102  T
Q  302 tgcagttttagtcctatctc 321  Q
    ||||||||||||||||||||    
T  28166103 tgcagttttagtcctatctc 28166122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 202 - 321
Target Start/End: Original strand, 33777631 - 33777750
Alignment:
Q  202 aggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttt 301  Q
    ||||||||||||||||||| | |||||||||||||||||| ||||||||| |||||| ||||| ||||||||||||||| ||||||||||||||||||||    
T  33777631 aggtttaattacacttttgttcctaccattttgaccaactcacgaaaatgatcatatttttttaaaatcgaacaaaatcgtccttaaactatatgttttt 33777730  T
Q  302 tgcagttttagtcctatctc 321  Q
    |||| ||||| |||||||||    
T  33777731 tgcaattttaatcctatctc 33777750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 201 - 321
Target Start/End: Original strand, 46736653 - 46736773
Alignment:
Q  201 aaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtttt 300  Q
    |||| ||||||| |||||||||||||| ||||||||||||| |||||||||||| ||| ||||||||||||||||||||  |||||||||||||||||||    
T  46736653 aaggcttaattatacttttggttctactattttgaccaactcacgaaaatggtcttattttttttaaatcgaacaaaattgtccttaaactatatgtttt 46736752  T
Q  301 ttgcagttttagtcctatctc 321  Q
    |||||| |||| |||||||||    
T  46736753 ttgcagatttaatcctatctc 46736773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 201 - 321
Target Start/End: Original strand, 41114155 - 41114277
Alignment:
Q  201 aaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatg--tt 298  Q
    |||||||||| ||||||||||| |||||||||||||||||| ||||||| |||| ||||||||||||||||||||||| | |||||||||||||||  ||    
T  41114155 aaggtttaatgacacttttggtcctaccattttgaccaactcacgaaaagggtcctatcttttttaaatcgaacaaaaacgtccttaaactatatgtttt 41114254  T
Q  299 ttttgcagttttagtcctatctc 321  Q
    |||||||||||||||| ||||||    
T  41114255 ttttgcagttttagtcatatctc 41114277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 201 - 302
Target Start/End: Original strand, 6616670 - 6616771
Alignment:
Q  201 aaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtttt 300  Q
    |||||||||||||||||||||||||| |||||||| ||||| |||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||    
T  6616670 aaggtttaattacacttttggttctatcattttgatcaactcacgaaaatggtcttattttttttaaatcgaacaaaatcgtccttaaactatatgtttt 6616769  T
Q  301 tt 302  Q
    ||    
T  6616770 tt 6616771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 28465084 - 28465199
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    |||||||||||||| || || |||||||||||||||||||||| || || || || ||||||||||||||||||| ||||||||||||||||||||||||    
T  28465084 ttaattacacttttagtccttccattttgaccaacttacgaaattgatcctacctcttttaaatcgaacaaaatcgtccttaaactatatgttttttgca 28465183  T
Q  306 gttttagtcctatctc 321  Q
    ||||||||| ||||||    
T  28465184 gttttagtcatatctc 28465199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 204 - 321
Target Start/End: Original strand, 14439829 - 14439946
Alignment:
Q  204 gtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttg 303  Q
    ||||||||||| ||||||| ||  |||||||||||||| |||||| |||||||| |||||||||||  ||||||||| ||| ||||||||||||||||||    
T  14439829 gtttaattacatttttggtccttgcattttgaccaactcacgaaattggtcataccttttttaaattaaacaaaatcgtccctaaactatatgttttttg 14439928  T
Q  304 cagttttagtcctatctc 321  Q
    ||||||||||||||||||    
T  14439929 cagttttagtcctatctc 14439946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 204 - 320
Target Start/End: Complemental strand, 16215040 - 16214924
Alignment:
Q  204 gtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttg 303  Q
    ||||||||| ||||||||| ||| |||||||| ||||||||||||||| ||||||||||||||||| ||| |||||| |||||||||||||| |||||||    
T  16215040 gtttaattatacttttggtcctatcattttgatcaacttacgaaaatgatcatatcttttttaaattgaataaaatcgtccttaaactatatattttttg 16214941  T
Q  304 cagttttagtcctatct 320  Q
    |||||||| | ||||||    
T  16214940 cagttttaattctatct 16214924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 206 - 321
Target Start/End: Complemental strand, 12593566 - 12593451
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||||| ||  |||||||||||||| |||||| |||||||| || ||||||||||||||||||| ||  |||||||||| |||||||||    
T  12593566 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtctgtaaactatatattttttgca 12593467  T
Q  306 gttttagtcctatctc 321  Q
    ||||||||||||||||    
T  12593466 gttttagtcctatctc 12593451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 206 - 320
Target Start/End: Complemental strand, 46737198 - 46737084
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||||| ||  |||||||||||||| |||||| ||||| || || ||||||||||||||||||| ||| ||||||||||||||||||||    
T  46737198 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgca 46737099  T
Q  306 gttttagtcctatct 320  Q
    ||||||||| |||||    
T  46737098 gttttagtcatatct 46737084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 206 - 321
Target Start/End: Complemental strand, 36168874 - 36168759
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||| ||||| |||||||||||||||||| ||||||||| || ||| |||||||||| |||||||||  | |||||| ||||||||||||||     
T  36168874 ttaattacactcttggtcctaccattttgaccaactcacgaaaatgatcctattttttttaaatagaacaaaattattcttaaattatatgttttttgcg 36168775  T
Q  306 gttttagtcctatctc 321  Q
    ||||||||||||||||    
T  36168774 gttttagtcctatctc 36168759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 193 - 321
Target Start/End: Original strand, 34807106 - 34807235
Alignment:
Q  193 ataaaataaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaacta 292  Q
    |||||||  ||| ||||||||||||||||| ||  |||||||| ||||| |||||| |||||||| || ||||||||||||||||||| ||| |||| ||    
T  34807106 ataaaatgtaggcttaattacacttttggtccttgcattttgatcaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaagta 34807205  T
Q  293 tatg-ttttttgcagttttagtcctatctc 321  Q
    |||| |||||||||||||||||||||||||    
T  34807206 tatgtttttttgcagttttagtcctatctc 34807235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 193 - 321
Target Start/End: Original strand, 33689819 - 33689946
Alignment:
Q  193 ataaaataaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaacta 292  Q
    |||||||  ||| ||||||||||||||||| ||  |||||||||||||| || ||| ||||| || || ||||||||||||||||||| |||||||||||    
T  33689819 ataaaatttaggcttaattacacttttggtccttgcattttgaccaactcacaaaattggtcctacctcttttaaatcgaacaaaatcgtccttaaacta 33689918  T
Q  293 tatgttttttgcagttttagtcctatctc 321  Q
    |||| ||||||||||||||||| ||||||    
T  33689919 tatg-tttttgcagttttagtcatatctc 33689946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 206 - 321
Target Start/End: Complemental strand, 34789926 - 34789810
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtt-ttttgc 304  Q
    ||||||||||||||||| ||  |||||||||||||| |||||| ||||| || || ||||||||||||||||||  ||| ||||||||||||| ||||||    
T  34789926 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaattgtccctaaactatatgtttttttgc 34789827  T
Q  305 agttttagtcctatctc 321  Q
    |||||||||||||||||    
T  34789826 agttttagtcctatctc 34789810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 54440574 - 54440687
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||||| ||  |||||||||||||| |||||| ||||| || || ||||||||||||||||||| ||| |||||  |||||||||||||    
T  54440574 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaac--tatgttttttgca 54440671  T
Q  306 gttttagtcctatctc 321  Q
    ||||||||||||||||    
T  54440672 gttttagtcctatctc 54440687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 210 - 321
Target Start/End: Original strand, 45838554 - 45838665
Alignment:
Q  210 ttacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgcagttt 309  Q
    ||||||||||||| ||   ||||||||||||| ||| || ||||| || || ||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  45838554 ttacacttttggtccttgtattttgaccaactcacgtaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgcagttt 45838653  T
Q  310 tagtcctatctc 321  Q
    ||||||||||||    
T  45838654 tagtcctatctc 45838665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 193 - 321
Target Start/End: Original strand, 19528859 - 19528988
Alignment:
Q  193 ataaaataaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaacta 292  Q
    |||||| | ||| ||||||||||||||||| ||  |||||||||||| | |||||| ||||| || || |||||||||||| |||||| ||| |||||||    
T  19528859 ataaaaaataggcttaattacacttttggtccttgcattttgaccaattcacgaaattggtcctacctcttttaaatcgaataaaatcgtccctaaacta 19528958  T
Q  293 tatg-ttttttgcagttttagtcctatctc 321  Q
    |||| |||||||||||||||||||||||||    
T  19528959 tatgtttttttgcagttttagtcctatctc 19528988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 206 - 321
Target Start/End: Complemental strand, 19529237 - 19529121
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtt-ttttgc 304  Q
    ||||||||||||||| | ||||||||||||||||||||  |||||| |  ||||| |||||||| |||||||||| || |||||||||||||| ||||||    
T  19529237 ttaattacacttttgctcctaccattttgaccaacttataaaaatgattctatctcttttaaattgaacaaaatcgtctttaaactatatgtttttttgc 19529138  T
Q  305 agttttagtcctatctc 321  Q
    ||||||||| |||||||    
T  19529137 agttttagttctatctc 19529121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 206 - 294
Target Start/End: Original strand, 24851319 - 24851407
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactata 294  Q
    ||||||||||||||| | |||||||||||||||||| |||||||||||  |||||||||||||| |||||||||| |||||||||||||    
T  24851319 ttaattacacttttgatcctaccattttgaccaactcacgaaaatggtgctatcttttttaaattgaacaaaatcgtccttaaactata 24851407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 202 - 302
Target Start/End: Original strand, 35643554 - 35643654
Alignment:
Q  202 aggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttt 301  Q
    ||||||||| ||||| |||||  ||||||||||||||||| |||||||||||| ||||||||| |||| ||| |||||| ||||||||||||||||||||    
T  35643554 aggtttaatcacactattggtcttaccattttgaccaactcacgaaaatggtcctatctttttaaaattgaataaaatcgtccttaaactatatgttttt 35643653  T
Q  302 t 302  Q
    |    
T  35643654 t 35643654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 194 - 321
Target Start/End: Original strand, 36168320 - 36168450
Alignment:
Q  194 taaaataaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat 293  Q
    ||||| ||||||||||||||||||||| | ||  |||||||||||||  |||||| ||||| || || ||||||||||||||||||| |||||||| |||    
T  36168320 taaaagaaaggtttaattacacttttgctccttgcattttgaccaacccacgaaattggtcttacctcttttaaatcgaacaaaatcgtccttaaattat 36168419  T
Q  294 atg---ttttttgcagttttagtcctatctc 321  Q
    |||   |||||||||||||||||| ||||||    
T  36168420 atgtttttttttgcagttttagtcttatctc 36168450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 206 - 320
Target Start/End: Complemental strand, 24852009 - 24851894
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtt-ttttgc 304  Q
    ||||||| ||||||||| ||  |||||||||||||| |||||| || || || || ||||||||||||||||||| ||| ||||||||||||| ||||||    
T  24852009 ttaattatacttttggtccttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttgc 24851910  T
Q  305 agttttagtcctatct 320  Q
    ||||||||||||||||    
T  24851909 agttttagtcctatct 24851894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 206 - 321
Target Start/End: Complemental strand, 33778155 - 33778040
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    |||||||||||||| |||||||||||||||| |||| ||||||||| |  || || ||||||||| ||||||||| | | |||| |||||||||||||||    
T  33778155 ttaattacacttttcgttctaccattttgactaactcacgaaaatgattctacctcttttaaatcaaacaaaatcgttcctaaattatatgttttttgca 33778056  T
Q  306 gttttagtcctatctc 321  Q
    |||||||| |||||||    
T  33778055 gttttagttctatctc 33778040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 202 - 321
Target Start/End: Complemental strand, 34807686 - 34807567
Alignment:
Q  202 aggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttt 301  Q
    ||||||||||| | |||||||  ||  ||||||| ||||| ||||||||  |  |||||||||||| |||||||||||| ||||||||||||||||||||    
T  34807686 aggtttaattatatttttggtcttattattttgatcaactcacgaaaattattctatcttttttaattcgaacaaaatcgtccttaaactatatgttttt 34807587  T
Q  302 tgcagttttagtcctatctc 321  Q
     |||||||||||||||||||    
T  34807586 ggcagttttagtcctatctc 34807567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 203 - 321
Target Start/End: Complemental strand, 6617208 - 6617090
Alignment:
Q  203 ggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtttttt 302  Q
    |||||||||||| ||||| | ||  ||||||||| |||| |||||| ||||| || || |||||||||||| |||||| ||| |||||||||| ||||||    
T  6617208 ggtttaattacatttttgctacttgcattttgactaactcacgaaattggtcctacctcttttaaatcgaataaaatcgtccctaaactatatttttttt 6617109  T
Q  303 gcagttttagtcctatctc 321  Q
    |||||||||||||||||||    
T  6617108 gcagttttagtcctatctc 6617090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 201 - 321
Target Start/End: Complemental strand, 21034785 - 21034664
Alignment:
Q  201 aaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactata-tgttt 299  Q
    |||| ||||||||| ||||||| ||  |||||||||||||| |||||| ||||| ||||| ||||||||||||||||||| ||| | ||||||| | |||    
T  21034785 aaggcttaattacaattttggtccttgcattttgaccaactcacgaaattggtcctatctcttttaaatcgaacaaaatcgtccctgaactatatttttt 21034686  T
Q  300 tttgcagttttagtcctatctc 321  Q
    |||||||||||||| |||||||    
T  21034685 tttgcagttttagttctatctc 21034664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 228 - 321
Target Start/End: Original strand, 35193333 - 35193426
Alignment:
Q  228 cattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgcagttttagtcctatctc 321  Q
    |||||||| || || |||||||||||| || || ||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  35193333 cattttgatcagctcacgaaaatggtcctacctctttcaaatcgaacaaaatcgtccctaaactatatgttttttgcagttttagtcctatctc 35193426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 198 - 321
Target Start/End: Original strand, 41608369 - 41608493
Alignment:
Q  198 ataaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatg- 296  Q
    |||| |||||||||||||||||||| ||  |||||||| ||||| | |||| |||||||| || ||||||||||||||||||| |||  ||||||||||     
T  41608369 ataagggtttaattacacttttggtccttgcattttgatcaactcatgaaattggtcatacctcttttaaatcgaacaaaatcgtcc--aaactatatgt 41608466  T
Q  297 --ttttttgcagttttagtcctatctc 321  Q
      |||||||||||||||||||||||||    
T  41608467 ttttttttgcagttttagtcctatctc 41608493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 206 - 291
Target Start/End: Original strand, 1397598 - 1397683
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaact 291  Q
    ||||||||||||||| | | |||||||||||||||| |  ||||||||| ||||||||||||||||||||||||| ||||||||||    
T  1397598 ttaattacacttttgatccaaccattttgaccaactcataaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaact 1397683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 228 - 313
Target Start/End: Complemental strand, 17504480 - 17504395
Alignment:
Q  228 cattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgcagttttagt 313  Q
    |||||||| || || |||||||||||| ||||| ||||||||||||||||| | |||||||||||||||||||||||| |||||||    
T  17504480 cattttgaacagctcacgaaaatggtcctatctcttttaaatcgaacaaaaccgtccttaaactatatgttttttgcaattttagt 17504395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 201 - 321
Target Start/End: Complemental strand, 55677506 - 55677385
Alignment:
Q  201 aaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtt-t 299  Q
    |||| ||||||||||||||||| ||   ||||||||||||| |||||| ||||| || || ||||||||||||||||||| ||  ||||||||||||| |    
T  55677506 aaggcttaattacacttttggtccttgtattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtctctaaactatatgtttt 55677407  T
Q  300 tttgcagttttagtcctatctc 321  Q
    ||| || |||||||||||||||    
T  55677406 tttacaattttagtcctatctc 55677385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 206 - 317
Target Start/End: Original strand, 23986523 - 23986635
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat-atgttttttgc 304  Q
    |||||| |||||||||| ||  ||||||||||| || |||||||||||||| ||| ||| |||||||||||||   ||| |||||||| |||||||||||    
T  23986523 ttaatttcacttttggtcctcacattttgaccagctcacgaaaatggtcatgtctctttcaaatcgaacaaaactgtccctaaactatcatgttttttgc 23986622  T
Q  305 agttttagtccta 317  Q
    |||||||||||||    
T  23986623 agttttagtccta 23986635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 206 - 294
Target Start/End: Complemental strand, 41608958 - 41608870
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactata 294  Q
    ||||||||||||||||| |||||||||||||||||| |||||| ||||| || || ||||||||| ||||||||| | |||||||||||    
T  41608958 ttaattacacttttggtcctaccattttgaccaactcacgaaattggtcctacctcttttaaatccaacaaaatcgttcttaaactata 41608870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 228 - 317
Target Start/End: Original strand, 40160119 - 40160208
Alignment:
Q  228 cattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgcagttttagtccta 317  Q
    |||||| |||| || |||||||| |||||  || ||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||    
T  40160119 cattttaaccagctcacgaaaatagtcatgcctcttttaaatcgaacaaaaccgtccctaaactatatgttttttgcagttttagtccta 40160208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 317
Target Start/End: Complemental strand, 229707 - 229591
Alignment:
Q  201 aaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat-atgttt 299  Q
    ||||||||||||||||||||||  |  ||||||||||| || |||||||||||| |  || ||| ||||| ||||||||| |||||||||||| ||| ||    
T  229707 aaggtttaattacacttttggtcttcgcattttgaccagctcacgaaaatggtcttgcctctttcaaatcaaacaaaatcgtccttaaactatcatg-tt 229609  T
Q  300 tttgcagttttagtccta 317  Q
    |||||||||||| |||||    
T  229608 tttgcagttttaatccta 229591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 203 - 314
Target Start/End: Complemental strand, 40160636 - 40160525
Alignment:
Q  203 ggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat-atgttttt 301  Q
    |||||||||||| ||||||| ||  |||||||||||||| |||||||| |||||  || ||| |||| |||||||| | ||| |||||||| ||||||||    
T  40160636 ggtttaattacatttttggtccttgcattttgaccaactcacgaaaatagtcatgcctctttcaaattgaacaaaaccgtcc-taaactatcatgttttt 40160538  T
Q  302 tgcagttttagtc 314  Q
    |||||||||||||    
T  40160537 tgcagttttagtc 40160525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 206 - 320
Target Start/End: Complemental strand, 26974788 - 26974673
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtt-ttttgc 304  Q
    ||||||||| ||||||| ||  ||||||||  || | |||||| ||||| || || ||||||||||||||||||  ||| ||||||||||||| ||||||    
T  26974788 ttaattacatttttggtccttgcattttgaataattcacgaaattggtcctacctcttttaaatcgaacaaaattgtccctaaactatatgtttttttgc 26974689  T
Q  305 agttttagtcctatct 320  Q
    |||||||||| |||||    
T  26974688 agttttagtcatatct 26974673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 196 - 313
Target Start/End: Original strand, 229154 - 229271
Alignment:
Q  196 aaataaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat-a 294  Q
    ||||| ||||||||||||||||||||| ||   |||||||||| ||  ||||||||||| |  || ||| |||| |||||||||| |||||||||||| |    
T  229154 aaatataggtttaattacacttttggtcctcgtattttgaccagctcgcgaaaatggtcttgcctctttcaaattgaacaaaatcgtccttaaactatca 229253  T
Q  295 tgttttttgcagttttagt 313  Q
    || ||||||||||||||||    
T  229254 tg-tttttgcagttttagt 229271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 199 - 314
Target Start/End: Complemental strand, 51310055 - 51309939
Alignment:
Q  199 taaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat-atgt 297  Q
    |||||| |||||| |||||||||| ||  |||||| |||| || ||||||||||||||  || ||| |||||||||||||   ||| |||||||| ||||    
T  51310055 taaaggcttaattgcacttttggtcctcgcatttttaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaacagtccctaaactatcatgt 51309956  T
Q  298 tttttgcagttttagtc 314  Q
    ||||| | |||||||||    
T  51309955 tttttacggttttagtc 51309939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 317
Target Start/End: Original strand, 17503967 - 17504088
Alignment:
Q  196 aaataaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat-a 294  Q
    |||| |||| ||||||| ||| ||||| ||  ||||||||||| || |||||||||||| |  || ||| |||| ||||| || | |||| ||||||| |    
T  17503967 aaattaaggcttaattatactgttggtcctcgcattttgaccatctcacgaaaatggtcctgcctctttcaaatggaacataaccgtcct-aaactatca 17504065  T
Q  295 tgttttttgcagttttagtccta 317  Q
    |||||||||||||||||||||||    
T  17504066 tgttttttgcagttttagtccta 17504088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 206 - 317
Target Start/End: Original strand, 24335764 - 24335876
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat-atgttttttgc 304  Q
    ||||||||||||| | | ||  ||||||||||| || ||||||||||||||  || ||| ||||||||||||| | |   | |||||| ||||||||||     
T  24335764 ttaattacactttcgatccttgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgtatctgaactatcatgttttttgg 24335863  T
Q  305 agttttagtccta 317  Q
    |||||||||||||    
T  24335864 agttttagtccta 24335876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 317
Target Start/End: Complemental strand, 30598059 - 30597951
Alignment:
Q  209 attacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgcagtt 308  Q
    |||||||||||||| ||    |||||||||||| ||| || ||||  | ||| ||||||||||||||||||| ||| |||| ||||| ||| ||||| ||    
T  30598059 attacacttttggtcctcgtgttttgaccaactcacggaattggttctgtctcttttaaatcgaacaaaatcgtccctaaattatatttttgttgcactt 30597960  T
Q  309 ttagtccta 317  Q
    || ||||||    
T  30597959 ttggtccta 30597951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 202 - 277
Target Start/End: Complemental strand, 31297236 - 31297161
Alignment:
Q  202 aggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaa 277  Q
    ||||| |||| |||||||||||||   ||||  ||||||| |||||| |||||||  |||||||||||||||||||    
T  31297236 aggttaaattgcacttttggttctcgtatttaaaccaactcacgaaattggtcatgccttttttaaatcgaacaaa 31297161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 206 - 269
Target Start/End: Complemental strand, 35644105 - 35644042
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaat 269  Q
    ||||||||||||||||| ||  |||||||||||||| ||||||  ||||||| || ||||||||    
T  35644105 ttaattacacttttggtccttgcattttgaccaactcacgaaataggtcatacctcttttaaat 35644042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 276
Target Start/End: Original strand, 44219378 - 44219448
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaa 276  Q
    ||||||||||||||||| ||   ||||| ||||||| |||||| ||||| | |||||||||||| ||||||    
T  44219378 ttaattacacttttggtcctcgtattttaaccaactcacgaaattggtcctctcttttttaaattgaacaa 44219448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 313
Target Start/End: Original strand, 18965130 - 18965250
Alignment:
Q  193 ataaaataaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaacta 292  Q
    |||||||| | | ||||||||| ||||| | ||  |||||| ||  ||| ||||||| |||| |  || ||| ||||||||||||||| |||||||||||    
T  18965130 ataaaatataagcttaattacatttttgatcctcacattttaacttactcacgaaaacggtcttgcctctttcaaatcgaacaaaatcgtccttaaacta 18965229  T
Q  293 t-atgttttttgcagttttagt 313  Q
    | ||| ||||||||||||||||    
T  18965230 tcatg-tttttgcagttttagt 18965250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 277
Target Start/End: Original strand, 51640957 - 51641034
Alignment:
Q  200 aaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaa 277  Q
    ||||||||||||||| |||||||| |  | ||| |||||||| || ||| ||||| |  |||||||||||||||||||    
T  51640957 aaaggtttaattacatttttggttttcgcttttagaccaactcacaaaattggtcctgccttttttaaatcgaacaaa 51641034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 317
Target Start/End: Complemental strand, 24336306 - 24336194
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat-atgttttttgc 304  Q
    ||||||||||||||| | ||  ||||||||| | || |||||||||||| |  || ||| ||||||||||||| | | | |||| ||| |||||||||||    
T  24336306 ttaattacacttttgatcctcgcattttgacaagctcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgttcctaaattatcatgttttttgc 24336207  T
Q  305 agttttagtccta 317  Q
      |||||||||||    
T  24336206 tcttttagtccta 24336194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 96; Significance: 5e-47; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 206 - 321
Target Start/End: Complemental strand, 600041 - 599926
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  600041 ttaattacacttttggtcctaccattttgaccaactaacgaaaatggtcatatcttttttaaatggaacaaaatcgtccttaaactatatgttttttgca 599942  T
Q  306 gttttagtcctatctc 321  Q
    ||||||||| ||||||    
T  599941 gttttagtcttatctc 599926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 200 - 321
Target Start/End: Complemental strand, 18428311 - 18428189
Alignment:
Q  200 aaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtt- 298  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||     
T  18428311 aaaggtttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttt 18428212  T
Q  299 ttttgcagttttagtcctatctc 321  Q
    ||||||||||||| |||||||||    
T  18428211 ttttgcagttttactcctatctc 18428189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 201 - 321
Target Start/End: Original strand, 41260269 - 41260389
Alignment:
Q  201 aaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtttt 300  Q
    |||| ||||||||||||||||| |||||||||||||||||| | |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  41260269 aaggcttaattacacttttggtcctaccattttgaccaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 41260368  T
Q  301 ttgcagttttagtcctatctc 321  Q
    |||||||||||||| ||||||    
T  41260369 ttgcagttttagtcttatctc 41260389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 206 - 321
Target Start/End: Complemental strand, 16578639 - 16578524
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||||| ||||||||||||| |||| ||||||||||| |||||||||| ||||||||||||||| || |||||||||||||||||||||    
T  16578639 ttaattacacttttggtcctaccattttgacgaactcacgaaaatggttatatctttttcaaatcgaacaaaatcatcattaaactatatgttttttgca 16578540  T
Q  306 gttttagtcctatctc 321  Q
    ||||||||||||||||    
T  16578539 gttttagtcctatctc 16578524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 208 - 321
Target Start/End: Original strand, 18049595 - 18049709
Alignment:
Q  208 aattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatg-ttttttgcag 306  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||  ||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  18049595 aattacacttttggtcctaccattttgaccaactcacgaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttgcag 18049694  T
Q  307 ttttagtcctatctc 321  Q
    |||||||||||||||    
T  18049695 ttttagtcctatctc 18049709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 206 - 317
Target Start/End: Original strand, 5730820 - 5730931
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||||| |||||||||||||||||| |||||||| ||| ||||||||||||||| ||||||||| |||||||||||||||||||||||     
T  5730820 ttaattacacttttggtcctaccattttgaccaactcacgaaaatagtcctatcttttttaaatcaaacaaaatcgtccttaaactatatgttttttgct 5730919  T
Q  306 gttttagtccta 317  Q
    ||||||||||||    
T  5730920 gttttagtccta 5730931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 28254428 - 28254544
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatg-ttttttgc 304  Q
    ||||||||||||||||| |||||||||||| ||||| |||||||||||| ||||| |||||||| |||||||||| ||||||||||||||| ||||||||    
T  28254428 ttaattacacttttggtcctaccattttgatcaactcacgaaaatggtcctatctattttaaattgaacaaaatcgtccttaaactatatgtttttttgc 28254527  T
Q  305 agttttagtcctatctc 321  Q
    |||||||||||||||||    
T  28254528 agttttagtcctatctc 28254544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 206 - 302
Target Start/End: Complemental strand, 15256374 - 15256278
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtttttt 302  Q
    ||||||||||||||||| |||||||||||||||||| | |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  15256374 ttaattacacttttggtcctaccattttgaccaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttt 15256278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 34799082 - 34799198
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatg-ttttttgc 304  Q
    |||||||||||||||||  ||||||||||||||||| | |||||||||| ||| |||||||||||||||||| || ||||||||||||||| ||||||||    
T  34799082 ttaattacacttttggtcataccattttgaccaactcatgaaaatggtcctattttttttaaatcgaacaaagtcgtccttaaactatatgtttttttgc 34799181  T
Q  305 agttttagtcctatctc 321  Q
    |||||||||||||||||    
T  34799182 agttttagtcctatctc 34799198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 206 - 320
Target Start/End: Complemental strand, 9797270 - 9797155
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtt-ttttgc 304  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||  ||||||||||||||| || |||||| ||||||||||||||||| ||||||    
T  9797270 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggttctatcttttttaaatcaaataaaatcgtccttaaactatatgtttttttgc 9797171  T
Q  305 agttttagtcctatct 320  Q
    ||||||||| ||||||    
T  9797170 agttttagttctatct 9797155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 15255856 - 15255971
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||||| ||  |||||||||||||| |||||| ||||| || || ||||||||||||||||||| ||| ||||||||||||||||||||    
T  15255856 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgca 15255955  T
Q  306 gttttagtcctatctc 321  Q
    ||||||||||||||||    
T  15255956 gttttagtcctatctc 15255971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 193 - 320
Target Start/End: Complemental strand, 34799639 - 34799512
Alignment:
Q  193 ataaaataaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaacta 292  Q
    |||||||| ||| ||||||||||||||||| ||  |||||||||||| | |||||| ||||| || || ||||||||||||||||||  ||| |||||||    
T  34799639 ataaaatataggcttaattacacttttggtcctttcattttgaccaattaacgaaattggtcctacctcttttaaatcgaacaaaattgtccctaaacta 34799540  T
Q  293 tatgttttttgcagttttagtcctatct 320  Q
    ||||||||||||||||||||||||||||    
T  34799539 tatgttttttgcagttttagtcctatct 34799512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 204 - 321
Target Start/End: Complemental strand, 18050136 - 18050019
Alignment:
Q  204 gtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttg 303  Q
    ||||||||||| ||||||| ||  |||||||||||||| |||||| |||||||| || ||||||||||||||||||| ||| ||||||||||||||||||    
T  18050136 gtttaattacatttttggtccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttg 18050037  T
Q  304 cagttttagtcctatctc 321  Q
    | |||||| |||||||||    
T  18050036 ctgttttaatcctatctc 18050019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 201 - 321
Target Start/End: Original strand, 599530 - 599650
Alignment:
Q  201 aaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtttt 300  Q
    |||| ||||||||| ||||||| ||  |||||||||||||| |||||| |||||||| || ||||||||||||||||||| ||| |||| ||||||||||    
T  599530 aaggcttaattacatttttggtccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcatccctaaattatatgtttt 599629  T
Q  301 ttgcagttttagtcctatctc 321  Q
    |||||||||||||| ||||||    
T  599630 ttgcagttttagtcatatctc 599650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 206 - 302
Target Start/End: Original strand, 2208717 - 2208813
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtttttt 302  Q
    ||||||||||||||| | |||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||| |||||||||||||| ||||||    
T  2208717 ttaattacacttttgatcctaccattttgaccaactcacgaaaattgtcctatcttttttaaatcgaacaaaatcgtccttaaactatatatttttt 2208813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 9796729 - 9796844
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||||| ||  |||||||||||||| || ||| ||||| || || ||||||||||||||||||| ||| ||||||||||||||||||||    
T  9796729 ttaattacacttttggtccttgcattttgaccaactcacaaaattggtcctacctcttttaaatcgaacaaaatcatccataaactatatgttttttgca 9796828  T
Q  306 gttttagtcctatctc 321  Q
    ||||||||| ||||||    
T  9796829 gttttagtcatatctc 9796844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 16578111 - 16578226
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||| ||||||||||  |||||||||||||| |||||| ||||| || || ||||||||||||||||||| ||| |||| |||||||||||||||    
T  16578111 ttaattacatttttggttcttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaattatatgttttttgca 16578210  T
Q  306 gttttagtcctatctc 321  Q
    ||||| ||||||||||    
T  16578211 gttttggtcctatctc 16578226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 206 - 321
Target Start/End: Complemental strand, 28254969 - 28254854
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||||| ||  |||||||||||||| |||||| ||||| || || ||||||||||||||||||| ||| ||||||||||  ||||||||    
T  28254969 ttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatataatttttgca 28254870  T
Q  306 gttttagtcctatctc 321  Q
    ||||||||||||||||    
T  28254869 gttttagtcctatctc 28254854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 206 - 321
Target Start/End: Complemental strand, 41260804 - 41260689
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||| |||||||||  |  |||||||| ||||| |||||| || ||||| || ||||||||||||||||||| ||| ||||||||||||||||||||    
T  41260804 ttaattatacttttggtcattgcattttgatcaactcacgaaattgatcatacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgca 41260705  T
Q  306 gttttagtcctatctc 321  Q
    ||||||||||||||||    
T  41260704 gttttagtcctatctc 41260689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 42035775 - 42035890
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||||| ||  |||||||||||||| |||||||||||  || || ||||||||||||||||||| ||| |||||||||| | |||||||    
T  42035775 ttaattacacttttggtcctcacattttgaccaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccataaactatatatattttgca 42035874  T
Q  306 gttttagtcctatctc 321  Q
     |||||||||||||||    
T  42035875 attttagtcctatctc 42035890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 206 - 321
Target Start/End: Complemental strand, 35427355 - 35427240
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||||| ||  |||||||||||||| |||||||||||  || || ||||||| ||||||||||| ||| |||| ||||| |||||||||    
T  35427355 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggttctacctcttttaaaccgaacaaaatcgtccctaaattatatattttttgca 35427256  T
Q  306 gttttagtcctatctc 321  Q
    |||||||||| |||||    
T  35427255 gttttagtcccatctc 35427240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 203 - 302
Target Start/End: Complemental strand, 35694424 - 35694325
Alignment:
Q  203 ggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtttttt 302  Q
    |||||||||||||||||||| || |||||||||| |||| || ||||||||| ||  ||||||||||||||||||||| |||||||||||||| ||||||    
T  35694424 ggtttaattacacttttggtccttccattttgactaactcacaaaaatggtcctacattttttaaatcgaacaaaatcgtccttaaactatatttttttt 35694325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 200 - 318
Target Start/End: Original strand, 7910613 - 7910730
Alignment:
Q  200 aaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttt 299  Q
    ||||| ||||||||| ||||||| ||  |||||||| ||||| ||||||||||| ||| || ||||||||||||||||||| ||| |||| |||||||||    
T  7910613 aaaggcttaattacatttttggtcctcacattttgatcaactcacgaaaatggttatacctcttttaaatcgaacaaaatcgtccctaaattatatgttt 7910712  T
Q  300 tttgcagttttagtcctat 318  Q
    ||||||| |||||||||||    
T  7910713 tttgcag-tttagtcctat 7910730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 206 - 319
Target Start/End: Complemental strand, 7911159 - 7911046
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||  | ||  |||||||||||||| |||||||||||  || || ||||||||||||||||||| ||| |||||||||| |||||||||    
T  7911159 ttaattacacttttaatcctcgcattttgaccaactcacgaaaatggttctacctcttttaaatcgaacaaaatcgtccctaaactatatattttttgca 7911060  T
Q  306 gttttagtcctatc 319  Q
    ||||||||| ||||    
T  7911059 gttttagtcatatc 7911046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 228 - 314
Target Start/End: Complemental strand, 42036293 - 42036206
Alignment:
Q  228 cattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtt-ttttgcagttttagtc 314  Q
    |||||||||||||||||||||||| || || || ||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||    
T  42036293 cattttgaccaacttacgaaaatgatcttacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttgcagttttagtc 42036206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 228 - 321
Target Start/End: Complemental strand, 5731333 - 5731240
Alignment:
Q  228 cattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgcagttttagtcctatctc 321  Q
    |||||||||||||| | |||| ||||  || ||||| |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||    
T  5731333 cattttgaccaactcaggaaattggttctaccttttataaatcgaacaaaatcgtccataaactatatgttttttgcagttttagttctatctc 5731240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 26252849 - 26252927
Alignment:
Q  243 acgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgcagttttagtcctatctc 321  Q
    |||||| |||| | |||| ||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||    
T  26252849 acgaaattggtaacatctcttttaaatcgaacaaaatcgtccctaaactatatgttttgtgcagttttagtcctatctc 26252927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 200 - 317
Target Start/End: Complemental strand, 28877438 - 28877321
Alignment:
Q  200 aaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat-atgtt 298  Q
    ||||||||||||||||||||||| ||  |||||||||||||| ||||||||||| ||| || ||| |||| |||||||||  ||| | |||||| |||||    
T  28877438 aaaggtttaattacacttttggtcctcgcattttgaccaactcacgaaaatggttatacctctttcaaattgaacaaaattgtccct-aactatcatgtt 28877340  T
Q  299 ttttgcagttttagtccta 317  Q
    |||||| ||||||||||||    
T  28877339 ttttgctgttttagtccta 28877321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 206 - 321
Target Start/End: Complemental strand, 6115654 - 6115538
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtt-ttttgc 304  Q
    ||||||| ||||||||| ||   |||||||||||||  ||||| ||||| || || ||||||||||||||||||| ||| ||||||||||||| |||||     
T  6115654 ttaattatacttttggtccttgtattttgaccaactcgcgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttgt 6115555  T
Q  305 agttttagtcctatctc 321  Q
    ||||||||| |||||||    
T  6115554 agttttagttctatctc 6115538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 35693871 - 35693988
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaac--tatatgttttttg 303  Q
    ||||||||||||||| | ||  |||||||||||| ||||||||||| |  || || |||||||||||| |||||| ||| |||||  ||||| ||||||     
T  35693871 ttaattacacttttgatccttgcattttgaccaatttacgaaaatgattctacctcttttaaatcgaataaaatcgtccataaactatatatattttttt 35693970  T
Q  304 cagttttagtcctatctc 321  Q
    ||||||||||||||||||    
T  35693971 cagttttagtcctatctc 35693988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 311
Target Start/End: Original strand, 18674146 - 18674256
Alignment:
Q  201 aaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtttt 300  Q
    |||| ||||||||||| ||||| ||  || ||||||||| | |||||| ||||  |  |  ||||||||||||||||||| ||| |||||||||||||||    
T  18674146 aaggcttaattacactcttggtccttgcactttgaccaattcacgaaattggttcttccacttttaaatcgaacaaaatcgtccctaaactatatgtttt 18674245  T
Q  301 ttgcagtttta 311  Q
    |||||||||||    
T  18674246 ttgcagtttta 18674256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 254
Target Start/End: Original strand, 35426841 - 35426893
Alignment:
Q  202 aggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtc 254  Q
    |||||||||||||||||| || |||||||||||||||||| ||||||||||||    
T  35426841 aggtttaattacacttttagtcctaccattttgaccaactcacgaaaatggtc 35426893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 204 - 317
Target Start/End: Original strand, 18805165 - 18805277
Alignment:
Q  204 gtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttg 303  Q
    ||||||||||||||||||| |   ||||||||| | || |||||||||||  | ||| |||||||||||||||||   |||   |||||||||||||||     
T  18805165 gtttaattacacttttggtccctgcattttgacaagctcacgaaaatggttct-tctcttttaaatcgaacaaaactgtcccagaactatatgttttttc 18805263  T
Q  304 cagttttagtccta 317  Q
    | ||||||||||||    
T  18805264 ctgttttagtccta 18805277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 282 - 321
Target Start/End: Original strand, 35426892 - 35426931
Alignment:
Q  282 tccttaaactatatgttttttgcagttttagtcctatctc 321  Q
    |||||||||||||||||||||||| ||||| |||||||||    
T  35426892 tccttaaactatatgttttttgcaattttactcctatctc 35426931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 317
Target Start/End: Original strand, 2617735 - 2617860
Alignment:
Q  193 ataaaataaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaacta 292  Q
    |||||||||| ||||||||||| |||| || ||  ||||||||||   | |||||| |  |||| ||||||| |||| ||||||| |  |||||| ||||    
T  2617735 ataaaataaatgtttaattacattttttgtccttgcattttgaccggttcacgaaattaatcatgtctttttcaaattgaacaaagtagtccttatacta 2617834  T
Q  293 t-atgttttttgcagttttagtccta 317  Q
    | |||||||||||| |||| ||||||    
T  2617835 tcatgttttttgcaattttcgtccta 2617860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 317
Target Start/End: Complemental strand, 9930212 - 9930087
Alignment:
Q  193 ataaaataaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaacta 292  Q
    |||||||||||| ||||||||||||||||| ||   |||||| || ||| |||||| ||||| |  | |||| |||| |||||||||  ||||| |||||    
T  9930212 ataaaataaaggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaacta 9930113  T
Q  293 t-atgttttttgcagttttagtccta 317  Q
    | || ||| ||||| |||| ||||||    
T  9930112 tcatttttgttgcatttttcgtccta 9930087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 94; Significance: 7e-46; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 196 - 321
Target Start/End: Original strand, 21938556 - 21938681
Alignment:
Q  196 aaataaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatat 295  Q
    |||||||||||||||||||||||||||  ||||||||||| ||||| ||||||||| || ||||||||||||||||||||||||| ||| ||||||||||    
T  21938556 aaataaaggtttaattacacttttggtcttaccattttgatcaactcacgaaaatgatcttatcttttttaaatcgaacaaaatcgtccataaactatat 21938655  T
Q  296 gttttttgcagttttagtcctatctc 321  Q
    ||||||||||||||||||||||||||    
T  21938656 gttttttgcagttttagtcctatctc 21938681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 201 - 318
Target Start/End: Original strand, 37505065 - 37505183
Alignment:
Q  201 aaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatg-ttt 299  Q
    |||| ||||||||||||||||| |||||||||||||||||| |||||||||||  ||||||||||||||||||||||||| ||||||||||||||| |||    
T  37505065 aaggcttaattacacttttggtcctaccattttgaccaactcacgaaaatggttctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt 37505164  T
Q  300 tttgcagttttagtcctat 318  Q
    |||||||||||||||||||    
T  37505165 tttgcagttttagtcctat 37505183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 9992157 - 9992273
Alignment:
Q  206 ttaattacacttttggttctaccatttt-gaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgc 304  Q
    ||||||||||||||||| |||||||||| |||||||| ||| |||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||    
T  9992157 ttaattacacttttggtcctaccatttttgaccaactcacggaaatggtcctatcttttttaaatcgaacaaaatggtccttaaactatatgttttttgc 9992256  T
Q  305 agttttagtcctatctc 321  Q
    |||||||||||||||||    
T  9992257 agttttagtcctatctc 9992273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 206 - 321
Target Start/End: Complemental strand, 34555925 - 34555808
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtt--ttttg 303  Q
    |||||||||||||| || |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||  |||||    
T  34555925 ttaattacacttttagtcctaccattttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttttg 34555826  T
Q  304 cagttttagtcctatctc 321  Q
    ||||||||||| ||||||    
T  34555825 cagttttagtcatatctc 34555808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 199 - 321
Target Start/End: Original strand, 30786767 - 30786890
Alignment:
Q  199 taaaggtttaattacacttttggttctaccattttgaccaacttacgaaaat-ggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgt 297  Q
    |||||| ||||||||||||||||||||  |||||||||||||| |||||||| |||| || || ||||||||||||||||||| ||| ||||||||||||    
T  30786767 taaaggcttaattacacttttggttcttgcattttgaccaactcacgaaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatgt 30786866  T
Q  298 tttttgcagttttagtcctatctc 321  Q
    ||||||||||||||||||||||||    
T  30786867 tttttgcagttttagtcctatctc 30786890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 194 - 321
Target Start/End: Complemental strand, 44954781 - 44954654
Alignment:
Q  194 taaaataaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat 293  Q
    ||||||||| | ||||||||||||||||| ||  |||||||||||||| | ||||||| ||||| |||||||||||| ||||||||| ||| ||||||||    
T  44954781 taaaataaaagcttaattacacttttggtcctcgcattttgaccaactcatgaaaatgatcataccttttttaaatcaaacaaaatcatccataaactat 44954682  T
Q  294 atgttttttgcagttttagtcctatctc 321  Q
    ||||||||||||||||||||||||||||    
T  44954681 atgttttttgcagttttagtcctatctc 44954654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 203 - 321
Target Start/End: Complemental strand, 50305331 - 50305210
Alignment:
Q  203 ggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactata---tgttt 299  Q
    ||||||||||||||||||||||||||||||| ||||||| | |||||||||| ||||||||||||||||||||||||| |||||||||||||   | |||    
T  50305331 ggtttaattacacttttggttctaccattttaaccaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatatttttt 50305232  T
Q  300 tttgcagttttagtcctatctc 321  Q
    ||||||||||||||| ||||||    
T  50305231 tttgcagttttagtcatatctc 50305210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 206 - 321
Target Start/End: Complemental strand, 10279090 - 10278978
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||| | ||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||   ||    
T  10279090 ttaattacacttttgatcctaccgttttgaccaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgtttt---ca 10278994  T
Q  306 gttttagtcctatctc 321  Q
    ||||||||||||||||    
T  10278993 gttttagtcctatctc 10278978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 206 - 314
Target Start/End: Complemental strand, 44582602 - 44582493
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtt-ttttgc 304  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||| ||||||||||||||| || |||||||||||||| ||||||    
T  44582602 ttaattacacttttggttctaccattttgatcaactcacgaaaatggtcatatcattttcaaatcgaacaaaatcgtctttaaactatatgtttttttgc 44582503  T
Q  305 agttttagtc 314  Q
    ||||||||||    
T  44582502 agttttagtc 44582493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 206 - 321
Target Start/End: Complemental strand, 9992698 - 9992583
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||||| ||  ||||||||| |||| | |||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  9992698 ttaattacacttttggtccttgcattttgacaaactcatgaaaatggtcctatcttttttaaatcgaacaaaatcgtgcttaaactatatgttttttgca 9992599  T
Q  306 gttttagtcctatctc 321  Q
    || |||||||||||||    
T  9992598 gtattagtcctatctc 9992583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 204 - 321
Target Start/End: Complemental strand, 29439467 - 29439348
Alignment:
Q  204 gtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtt--ttt 301  Q
    |||||||| |||||||||| | |||||||||| ||||| ||||||||| || ||||||||||||||||||||||||| |||||||||||||||||  |||    
T  29439467 gtttaattgcacttttggtcccaccattttgatcaactcacgaaaatgatcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttt 29439368  T
Q  302 tgcagttttagtcctatctc 321  Q
    ||||| ||||||||||||||    
T  29439367 tgcagatttagtcctatctc 29439348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 205 - 317
Target Start/End: Original strand, 45048157 - 45048269
Alignment:
Q  205 tttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgc 304  Q
    |||||||||||||||||| ||  ||||||||||||||||||||||||||  || || |||||||| |||||||||| ||| |||||||||||||||||||    
T  45048157 tttaattacacttttggtccttgcattttgaccaacttacgaaaatggttctacctcttttaaattgaacaaaatcgtccataaactatatgttttttgc 45048256  T
Q  305 agttttagtccta 317  Q
    |||||||||||||    
T  45048257 agttttagtccta 45048269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 202 - 321
Target Start/End: Original strand, 39485064 - 39485183
Alignment:
Q  202 aggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttt 301  Q
    ||||||||||||||||||||| ||  ||||||||| | || |||||||||||| || || ||| ||||||||||||||| ||| ||||||||||||||||    
T  39485064 aggtttaattacacttttggtcctcgcattttgactagctcacgaaaatggtcctacctctttcaaatcgaacaaaatcgtccctaaactatatgttttt 39485163  T
Q  302 tgcagttttagtcctatctc 321  Q
    ||||||||||||||||||||    
T  39485164 tgcagttttagtcctatctc 39485183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 206 - 320
Target Start/End: Original strand, 16298685 - 16298799
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||| ||||||  ||  |||||||||||||| |||||| |||||||| || ||||||||||||||||||| ||| ||||||||||||||||||||    
T  16298685 ttaattacatttttggcccttgcattttgaccaactcacgaaattggtcatacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgca 16298784  T
Q  306 gttttagtcctatct 320  Q
    |||||||||||||||    
T  16298785 gttttagtcctatct 16298799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 202 - 319
Target Start/End: Complemental strand, 8230188 - 8230071
Alignment:
Q  202 aggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttt 301  Q
    ||||||||||||| ||||||||||  |||||||||| | | ||||||||||| ||| || ||||||||||||||||||| ||| ||||||||||||||||    
T  8230188 aggtttaattacatttttggttctcgcattttgacctattcacgaaaatggttatacctcttttaaatcgaacaaaatcgtccctaaactatatgttttt 8230089  T
Q  302 tgcagttttagtcctatc 319  Q
    ||||||||||||| ||||    
T  8230088 tgcagttttagtcatatc 8230071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 193 - 321
Target Start/End: Original strand, 29438920 - 29439049
Alignment:
Q  193 ataaaataaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaacta 292  Q
    |||||| ||||| ||||||||||||||||| ||  |||||||||||||| |||||| ||||| || || ||||||||||||||||||| ||| |||||||    
T  29438920 ataaaacaaaggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaacta 29439019  T
Q  293 tatg-ttttttgcagttttagtcctatctc 321  Q
     ||| |||||||||||||||||||||||||    
T  29439020 aatgtttttttgcagttttagtcctatctc 29439049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 203 - 307
Target Start/End: Complemental strand, 37421491 - 37421386
Alignment:
Q  203 ggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatc-ttttttaaatcgaacaaaatcctccttaaactatatgttttt 301  Q
    ||||||||||||||||| ||  ||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||| ||||||||||||||| ||||    
T  37421491 ggtttaattacacttttagtcataccattttgaccaactcacgaaaatggtcctatctttttttaaatcgaacaaaatcgtccttaaactatatgatttt 37421392  T
Q  302 tgcagt 307  Q
    ||||||    
T  37421391 tgcagt 37421386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 206 - 302
Target Start/End: Complemental strand, 30787341 - 30787245
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtttttt 302  Q
    ||||||||||||||| | ||||||||| || ||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  30787341 ttaattacacttttgatcctaccatttagatcaactcacgaaaatggtcatatctttttaaaatcgaacaaaatcgtccttaaactatatgtttttt 30787245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 201 - 321
Target Start/End: Complemental strand, 52336058 - 52335938
Alignment:
Q  201 aaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtttt 300  Q
    |||| |||||||| |||||||||||| |||||||||||||| | |||| ||||| || || ||||||||||||||||||| ||| |||||||||| ||||    
T  52336058 aaggcttaattactcttttggttctatcattttgaccaactcatgaaattggtcctacctcttttaaatcgaacaaaatcgtccctaaactatatttttt 52335959  T
Q  301 ttgcagttttagtcctatctc 321  Q
    |||||||||||||| ||||||    
T  52335958 ttgcagttttagtcatatctc 52335938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 1837508 - 1837623
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||||| ||  |||||||| ||||| |||||| || |||||||| ||||||||||||||||||  ||| ||||||||||||||||||||    
T  1837508 ttaattacacttttggtccttgcattttgatcaactcacgaaattgatcatatctcttttaaatcgaacaaaattgtccctaaactatatgttttttgca 1837607  T
Q  306 gttttagtcctatctc 321  Q
    ||||||||| ||||||    
T  1837608 gttttagtcatatctc 1837623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 206 - 321
Target Start/End: Complemental strand, 16299224 - 16299110
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||| |||||| || |||||||||||| |||||  ||||||||||| ||| |||||||| | |||||||||| ||||||||||||||||||||||||    
T  16299224 ttaattatactttttgtcctaccattttgatcaactcgcgaaaatggtcctattttttttaatt-gaacaaaatcgtccttaaactatatgttttttgca 16299126  T
Q  306 gttttagtcctatctc 321  Q
    ||||||||||||||||    
T  16299125 gttttagtcctatctc 16299110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 44582060 - 44582175
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||||| ||  |||||||||||||| |||||| ||||| || || ||||||||||||||||||| ||  |||| |||||||||||||||    
T  44582060 ttaattacacttttggtccttacattttgaccaactaacgaaattggtcctacctcttttaaatcgaacaaaatcgtctctaaattatatgttttttgca 44582159  T
Q  306 gttttagtcctatctc 321  Q
    ||||||||||||||||    
T  44582160 gttttagtcctatctc 44582175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 44954229 - 44954344
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||| |||| || |  ||||||||||||||| ||||||||||||||| |||||||||||| ||||||||| || ||||| |||||||||||||||    
T  44954229 ttaattacattttttgtccacccattttgaccaactcacgaaaatggtcataccttttttaaatccaacaaaatcgtctttaaattatatgttttttgca 44954328  T
Q  306 gttttagtcctatctc 321  Q
    ||||||||| ||||||    
T  44954329 gttttagtcgtatctc 44954344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 193 - 321
Target Start/End: Complemental strand, 17641925 - 17641792
Alignment:
Q  193 ataaaataaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaacta 292  Q
    |||||| |||| |||||||||||||||||| ||  |||||||||||||| ||||||||||||||| || ||||||||||||||||||| ||| |||||||    
T  17641925 ataaaaaaaagatttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtccctaaacta 17641826  T
Q  293 t-----atgttttttgcagttttagtcctatctc 321  Q
    |      | |||||||||||||||||||||||||    
T  17641825 tttttatttttttttgcagttttagtcctatctc 17641792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 206 - 314
Target Start/End: Original strand, 2867914 - 2868022
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||| |||||||  |  |||||||||||||| ||||||||| |||||||| ||||||||||||||||||  || |||||||||||||||||||||    
T  2867914 ttaattacaattttggtcatcgcattttgaccaactcacgaaaatgatcatatctcttttaaatcgaacaaaattgtcgttaaactatatgttttttgca 2868013  T
Q  306 gttttagtc 314  Q
    |||||||||    
T  2868014 gttttagtc 2868022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 193 - 321
Target Start/End: Original strand, 4080011 - 4080139
Alignment:
Q  193 ataaaataaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaacta 292  Q
    |||||||||||| | ||||||||||||||| ||  ||| |||||||||| |||||| || || || || ||||||||||||||||||| ||| |||||||    
T  4080011 ataaaataaaggctcaattacacttttggtccttgcatcttgaccaactcacgaaattgatcgtacctattttaaatcgaacaaaatcgtccctaaacta 4080110  T
Q  293 tatgttttttgcagttttagtcctatctc 321  Q
    |||||||||| ||||||||||| ||||||    
T  4080111 tatgttttttacagttttagtcatatctc 4080139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 10278551 - 10278667
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatg-ttttttgc 304  Q
    ||||||||||||||||| ||  |||||||||||||| |||||| || || || || ||||||||||||||||||| ||| ||||||||||| ||||||||    
T  10278551 ttaattacacttttggtccttgcattttgaccaactcacgaaattgatcctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttgc 10278650  T
Q  305 agttttagtcctatctc 321  Q
    |||||||||||||||||    
T  10278651 agttttagtcctatctc 10278667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 228 - 321
Target Start/End: Complemental strand, 444072 - 443979
Alignment:
Q  228 cattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgcagttttagtcctatctc 321  Q
    |||||||||||||| |||||| | |||||| || ||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||    
T  444072 cattttgaccaactcacgaaatttgtcatacctcttttaaatcgaacaaaatcgttcctaaactatatgttttttgcagttttagtcctatctc 443979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 206 - 319
Target Start/End: Complemental strand, 2868251 - 2868138
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||| | ||  |||||||||||||  |||||||||||| || || ||||||||||||||||||| ||| || |||||||||||||||||    
T  2868251 ttaattacacttttgatcctcacattttgaccaacacacgaaaatggtcctacctcttttaaatcgaacaaaatcgtccctacactatatgttttttgca 2868152  T
Q  306 gttttagtcctatc 319  Q
    ||||||||| ||||    
T  2868151 gttttagtcatatc 2868138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 23340186 - 23340301
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||| |  |  |||||||||||||| |||||| ||||| ||||| |||||||||||||||||||   | |||||||||| |||||||||    
T  23340186 ttaattacacttttgatcattgcattttgaccaactcacgaaattggtcctatctcttttaaatcgaacaaaatcgctcataaactatatattttttgca 23340285  T
Q  306 gttttagtcctatctc 321  Q
    ||||||||| ||||||    
T  23340286 gttttagtcatatctc 23340301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 202 - 314
Target Start/End: Original strand, 37421159 - 37421273
Alignment:
Q  202 aggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatg--ttt 299  Q
    |||||||||||||||||||||  |  |||||||||||| | |||||| ||||| || || ||||||||||||||||||| ||| |||||||||||  |||    
T  37421159 aggtttaattacacttttggtctttgcattttgaccaattcacgaaattggtcttacctcttttaaatcgaacaaaatcgtccctaaactatatgttttt 37421258  T
Q  300 tttgcagttttagtc 314  Q
    |||||||||||||||    
T  37421259 tttgcagttttagtc 37421273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 206 - 296
Target Start/End: Original strand, 50304442 - 50304532
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatg 296  Q
    ||||||||||||||||| ||  |||||||||||||| ||||||||||||||| || ||||||||||||||||||| ||  |||||||||||    
T  50304442 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcatacctcttttaaatcgaacaaaatcgtctctaaactatatg 50304532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 229 - 321
Target Start/End: Complemental strand, 37505587 - 37505496
Alignment:
Q  229 attttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgcagttttagtcctatctc 321  Q
    ||||||||||||| |||||| || |||||||| ||||||| | ||||||||| ||| |||||||||||| |||||||||||||||||||||||    
T  37505587 attttgaccaactcacgaaattgatcatatctcttttaaaacaaacaaaatcgtccataaactatatgt-ttttgcagttttagtcctatctc 37505496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 317
Target Start/End: Complemental strand, 45048682 - 45048567
Alignment:
Q  202 aggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat-atgtttt 300  Q
    ||||||||||||||||||||| ||  |||||||||||  | ||||||||||||||| || |||  |||||||||||| | ||| |||||||| |||||||    
T  45048682 aggtttaattacacttttggtcctcgcattttgaccagttcacgaaaatggtcatacctctttccaatcgaacaaaaccgtcc-taaactatcatgtttt 45048584  T
Q  301 ttgcagttttagtccta 317  Q
    |||||||||||||||||    
T  45048583 ttgcagttttagtccta 45048567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 17641405 - 17641483
Alignment:
Q  243 acgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgcagttttagtcctatctc 321  Q
    ||||||||||||||| |||||||||||||||||||||  | ||||||||||| |||||||| ||||||||| |||||||    
T  17641405 acgaaaatggtcataccttttttaaatcgaacaaaattgttcttaaactatacgttttttgtagttttagttctatctc 17641483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 34555382 - 34555499
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatg--ttttttg 303  Q
    ||||||||||||||||| ||  ||||||||| ||||  ||||| ||||  || || ||||||||||||||||||| ||| |||||||||||  ||||||     
T  34555382 ttaattacacttttggtccttgcattttgactaactcgcgaaattggtgctacctcttttaaatcgaacaaaatcgtccctaaactatatgtttttttta 34555481  T
Q  304 cagttttagtcctatctc 321  Q
    ||||||||||||||||||    
T  34555482 cagttttagtcctatctc 34555499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 206 - 313
Target Start/End: Complemental strand, 17088682 - 17088575
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||||| ||  |||||||| || || ||||||||||||||  || ||| ||||| ||||||| | ||| |||||||||| |||||||||    
T  17088682 ttaattacacttttggtcctctcattttgaacagctcacgaaaatggtcatgcctctttcaaatcaaacaaaaccgtccctaaactatatattttttgca 17088583  T
Q  306 gttttagt 313  Q
    ||||||||    
T  17088582 gttttagt 17088575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 210 - 315
Target Start/End: Original strand, 23526665 - 23526770
Alignment:
Q  210 ttacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgcagttt 309  Q
    ||||||||||||| ||  ||||||||||| || |||||||||||| |  || ||||||||||||||||||| ||| || |||||   |||||||||||||    
T  23526665 ttacacttttggtcctcacattttgaccagctcacgaaaatggtcctgcctcttttaaatcgaacaaaatcatccctagactatcatttttttgcagttt 23526764  T
Q  310 tagtcc 315  Q
    ||||||    
T  23526765 tagtcc 23526770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 206 - 316
Target Start/End: Original strand, 50926233 - 50926345
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat--atgttttttg 303  Q
    ||||||||| ||||||| || |||||||||||| || ||||||||  ||||| || ||| ||||||||||||||| ||| ||||||||   | |||||||    
T  50926233 ttaattacagttttggtcctcccattttgaccagctcacgaaaataatcatacctctttcaaatcgaacaaaatcgtccctaaactatcatttttttttg 50926332  T
Q  304 cagttttagtcct 316  Q
    |||||||||||||    
T  50926333 cagttttagtcct 50926345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 206 - 313
Target Start/End: Complemental strand, 44802714 - 44802606
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat-atgttttttgc 304  Q
    ||||||||||||||||| ||  ||||||||||| || |||||| |||||||  || ||| |||  |||||||||| ||| |||||||| |||||||||||    
T  44802714 ttaattacacttttggtccttgcattttgaccagctcacgaaagtggtcatgcctctttcaaacggaacaaaatcgtccctaaactatcatgttttttgc 44802615  T
Q  305 agttttagt 313  Q
    |||||||||    
T  44802614 agttttagt 44802606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 231 - 317
Target Start/End: Complemental strand, 9833670 - 9833583
Alignment:
Q  231 tttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaacta-tatgttttttgcagttttagtccta 317  Q
    ||||||||||| |||||||| |||||  || ||| ||||||||||||||| ||| |||| || |||||||||||||||||||||||||    
T  9833670 tttgaccaactcacgaaaatagtcatgcctctttcaaatcgaacaaaatcgtccctaaaatattatgttttttgcagttttagtccta 9833583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 197 - 316
Target Start/End: Complemental strand, 50926793 - 50926674
Alignment:
Q  197 aataaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatg 296  Q
    |||| ||| |||||||||||||||||  |  ||||||||||| || ||||||||||||   ||| ||| ||||||||||||| | ||| ||||||||       
T  50926793 aatataggcttaattacacttttggtcatcgcattttgaccagctcacgaaaatggtcccgtctctttcaaatcgaacaaaaccgtccctaaactatcat 50926694  T
Q  297 ttttttgcagttttagtcct 316  Q
    ||||||||||||||||||||    
T  50926693 ttttttgcagttttagtcct 50926674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 207 - 316
Target Start/End: Original strand, 25274760 - 25274869
Alignment:
Q  207 taattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgcag 306  Q
    ||||| |||||||||| ||  ||||||||||| || ||||||||||||||  || ||| ||||||||||||| | | | ||||||| ||||||||||||     
T  25274760 taattgcacttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgttcctaaactacatgttttttgcat 25274859  T
Q  307 ttttagtcct 316  Q
    |||| |||||    
T  25274860 ttttggtcct 25274869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 204 - 321
Target Start/End: Original strand, 6224698 - 6224817
Alignment:
Q  204 gtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaa--ctatatgttttt 301  Q
    ||||||||||| ||||| | ||| |||||||||||||| |  ||||||||  |   ||||||||||||||||||||| ||||||||   ||||| |||||    
T  6224698 gtttaattacatttttgatcctatcattttgaccaactcataaaaatggttcttgtttttttaaatcgaacaaaatcgtccttaaattatatatattttt 6224797  T
Q  302 tgcagttttagtcctatctc 321  Q
    | ||||||||||| ||||||    
T  6224798 tacagttttagtcttatctc 6224817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 8229640 - 8229758
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatg---tttttt 302  Q
    ||||||||||||||| | ||  |||||||| ||||| ||||||||| |  ||  | |||||||||||| |||||| ||  |||||||||||   ||||||    
T  8229640 ttaattacacttttgatcctcacattttgatcaactcacgaaaatgattctacatcttttaaatcgaataaaatcgtctctaaactatatgttttttttt 8229739  T
Q  303 gcagttttagtcctatctc 321  Q
    |||||||||||||||||||    
T  8229740 gcagttttagtcctatctc 8229758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 246 - 313
Target Start/End: Original strand, 29020923 - 29020991
Alignment:
Q  246 aaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat-atgttttttgcagttttagt 313  Q
    ||||||||||| ||| ||||||||||||||||||| |||||||| ||| |||||||||||| |||||||    
T  29020923 aaaatggtcatgtctcttttaaatcgaacaaaatcatccttaaattatcatgttttttgcaattttagt 29020991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 200 - 317
Target Start/End: Complemental strand, 44291860 - 44291742
Alignment:
Q  200 aaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat-atgtt 298  Q
    |||||||||||| || |||| || ||   |||||||||| || | |||||||||||| ||| |||||||||||| |||||| ||    |||||| |||||    
T  44291860 aaaggtttaattgcatttttagtccttgtattttgaccagctcatgaaaatggtcatgtctcttttaaatcgaataaaatcgtcacctaactatcatgtt 44291761  T
Q  299 ttttgcagttttagtccta 317  Q
    |||||||||||||||||||    
T  44291760 ttttgcagttttagtccta 44291742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 315
Target Start/End: Complemental strand, 23527073 - 23526964
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||| ||||||| | ||  |||||||| || || | ||||||||||||  |||||||||||||||||||| | ||  ||||||||   |||||||||    
T  23527073 ttaattatacttttgatcctcacattttgatcagctcatgaaaatggtcatgccttttttaaatcgaacaaaaccgtctctaaactatcatttttttgca 23526974  T
Q  306 gttttagtcc 315  Q
    ||||||||||    
T  23526973 gttttagtcc 23526964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 206 - 314
Target Start/End: Original strand, 44291304 - 44291415
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat-atg--tttttt 302  Q
    |||||| |||||||||| ||  ||||||||||| || ||||||||||| ||  || ||| |||| |||||||||| ||| |||||||| |||  ||||||    
T  44291304 ttaattgcacttttggtcctcacattttgaccagctcacgaaaatggttatgcctctttcaaattgaacaaaatcgtccataaactatcatgtttttttt 44291403  T
Q  303 gcagttttagtc 314  Q
    ||||||||||||    
T  44291404 gcagttttagtc 44291415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 206 - 314
Target Start/End: Complemental strand, 29021408 - 29021298
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat--atgttttttg 303  Q
    |||||| |||||||||| ||  ||||||||||| || ||||||||| ||||  || ||| ||||||||||||||| ||| |||| |||    ||||||||    
T  29021408 ttaattgcacttttggtcctcacattttgaccagctcacgaaaatgttcatgcctctttcaaatcgaacaaaatcgtccctaaattatcacggttttttg 29021309  T
Q  304 cagttttagtc 314  Q
    |||||||||||    
T  29021308 cagttttagtc 29021298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 314
Target Start/End: Complemental strand, 36229489 - 36229414
Alignment:
Q  240 cttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat-atgttttttgcagttttagtc 314  Q
    ||||||||||||||| | ||| | |||||| ||||||| |  |||||||||||| |||||||||||||||||||||    
T  36229489 cttacgaaaatggtcttgtctctattaaattgaacaaactgatccttaaactatcatgttttttgcagttttagtc 36229414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 202 - 277
Target Start/End: Original strand, 50419389 - 50419464
Alignment:
Q  202 aggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaa 277  Q
    |||||||||| |||||||||| ||  |||||  ||||||| || ||||||||||| ||||||| ||||||||||||    
T  50419389 aggtttaattgcacttttggtcctcgcatttaaaccaactcacaaaaatggtcatgtctttttcaaatcgaacaaa 50419464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 93; Significance: 3e-45; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 193 - 321
Target Start/End: Original strand, 5114458 - 5114586
Alignment:
Q  193 ataaaataaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaacta 292  Q
    ||||||| |||| ||||||||| ||||| | |||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  5114458 ataaaatgaaggcttaattacatttttgatcctaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaacta 5114557  T
Q  293 tatgttttttgcagttttagtcctatctc 321  Q
    |||||||||||||||||||||||||||||    
T  5114558 tatgttttttgcagttttagtcctatctc 5114586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 205 - 321
Target Start/End: Complemental strand, 24640729 - 24640613
Alignment:
Q  205 tttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgc 304  Q
    |||||||| ||||||||| |||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  24640729 tttaattatacttttggtcctaccattttgatcaactcacgaaaatggtcctatcttttttaaatcgaacaaaatcgtccttaaactatatgttttttgc 24640630  T
Q  305 agttttagtcctatctc 321  Q
    |||||||||| ||||||    
T  24640629 agttttagtcttatctc 24640613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 206 - 321
Target Start/End: Complemental strand, 25472556 - 25472440
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtt-ttttgc 304  Q
    ||||||||||||||| | |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  25472556 ttaattacacttttgatcctaccattttgaccaactcacgaaaatggtcttatcttttttaaatcgaacaaaatcgtccttaaactatatgtttttttgc 25472457  T
Q  305 agttttagtcctatctc 321  Q
    |||||||||||||||||    
T  25472456 agttttagtcctatctc 25472440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 202 - 321
Target Start/End: Original strand, 25468848 - 25468969
Alignment:
Q  202 aggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtttt- 300  Q
    ||||||||||||||||||||| ||  |||||||||||||| |||||| ||||||||||| ||||||||||||||||||| ||| |||||||||||||||     
T  25468848 aggtttaattacacttttggtccttacattttgaccaactcacgaaattggtcatatctcttttaaatcgaacaaaatcgtccctaaactatatgttttt 25468947  T
Q  301 -ttgcagttttagtcctatctc 321  Q
     |||||||||||||||||||||    
T  25468948 cttgcagttttagtcctatctc 25468969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 194 - 321
Target Start/End: Complemental strand, 31574280 - 31574153
Alignment:
Q  194 taaaataaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat 293  Q
    ||||| ||||| ||||||||||||||||| ||  |||||||||||||| |||||| | |||||| || ||||||||||||||||||| ||| ||||||||    
T  31574280 taaaaaaaaggcttaattacacttttggtccttgcattttgaccaactcacgaaattagtcatacctcttttaaatcgaacaaaatcgtccctaaactat 31574181  T
Q  294 atgttttttgcagttttagtcctatctc 321  Q
    ||||||||||||||||||||| ||||||    
T  31574180 atgttttttgcagttttagtcatatctc 31574153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 206 - 321
Target Start/End: Complemental strand, 30251235 - 30251119
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgt-tttttgc 304  Q
    ||||||||||||||| | |||| ||||||||||||| || ||||| ||||||||||||||||||||||||||||| |||||||||||| ||| ||||||     
T  30251235 ttaattacacttttgatcctactattttgaccaactcacaaaaattgtcatatcttttttaaatcgaacaaaatcgtccttaaactatttgtatttttgt 30251136  T
Q  305 agttttagtcctatctc 321  Q
    |||||||||| ||||||    
T  30251135 agttttagtcttatctc 30251119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 206 - 321
Target Start/End: Complemental strand, 5121012 - 5120897
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||||| ||  |||||||||||||| |||||| |  || || || ||||||||||||||||||| ||| ||||||||||||||||||||    
T  5121012 ttaattacacttttggtccttgcattttgaccaactcacgaaattattcctacctcttttaaatcgaacaaaatcgtccctaaactatatgttttttgca 5120913  T
Q  306 gttttagtcctatctc 321  Q
    ||||||||||||||||    
T  5120912 gttttagtcctatctc 5120897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 206 - 321
Target Start/End: Complemental strand, 31073685 - 31073570
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||||| ||  ||||||||||| || |||||| |||||||| || ||||||||||||||||||  ||| ||||||||||||||| ||||    
T  31073685 ttaattacacttttggtccttgcattttgaccagctcacgaaattggtcatacctcttttaaatcgaacaaaattgtccctaaactatatgttttgtgca 31073586  T
Q  306 gttttagtcctatctc 321  Q
    ||||||||||||||||    
T  31073585 gttttagtcctatctc 31073570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 31573723 - 31573843
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcata-tcttttttaaatcgaacaaaatcctccttaaactatatg----tttt 300  Q
    ||||||| ||||||||| |||||||||||||||||| |||||||| ||| || | ||||||||||||||||||||| | |||||||||||||    ||||    
T  31573723 ttaattatacttttggtcctaccattttgaccaactcacgaaaatagtcctatttttttttaaatcgaacaaaatcgttcttaaactatatgtttttttt 31573822  T
Q  301 ttgcagttttagtcctatctc 321  Q
    |||||||||||||||||||||    
T  31573823 ttgcagttttagtcctatctc 31573843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 206 - 321
Target Start/End: Complemental strand, 29891627 - 29891508
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatctttttta----aatcgaacaaaatcctccttaaactatatgttttt 301  Q
    ||||||||||||||||| ||||||||||||||||||   |||||||||| | | || ||||    ||| |||||||||| ||||||||||||||||||||    
T  29891627 ttaattacacttttggtcctaccattttgaccaactcgtgaaaatggtccttttttatttatttaaattgaacaaaatcgtccttaaactatatgttttt 29891528  T
Q  302 tgcagttttagtcctatctc 321  Q
    ||||||||||||||||||||    
T  29891527 tgcagttttagtcctatctc 29891508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 206 - 317
Target Start/End: Complemental strand, 32836539 - 32836428
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    |||||||||||||| || ||  ||||||||||| || ||||||||||||||  || ||| ||||||||||||| | | |||||||| |||||||||||||    
T  32836539 ttaattacacttttagtccttgcattttgaccagctcacgaaaatggtcatgcctctttcaaatcgaacaaaaccgttcttaaactgtatgttttttgca 32836440  T
Q  306 gttttagtccta 317  Q
    ||||||||||||    
T  32836439 gttttagtccta 32836428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 193 - 321
Target Start/End: Original strand, 29891070 - 29891198
Alignment:
Q  193 ataaaataaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaacta 292  Q
    |||| ||| ||| ||||||||||||||| | ||  ||||||||| ||||||||||| || ||||| || ||||||| ||||||||| | ||| |||||||    
T  29891070 ataatatataggcttaattacacttttgttccttacattttgactaacttacgaaattgatcatacctcttttaaaccgaacaaaagcgtccctaaacta 29891169  T
Q  293 tatgttttttgcagttttagtcctatctc 321  Q
    |||||||||| || ||||| | |||||||    
T  29891170 tatgttttttacaattttaattctatctc 29891198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 202 - 317
Target Start/End: Original strand, 35163183 - 35163298
Alignment:
Q  202 aggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat-atgtttt 300  Q
    |||||||||||||||||| || ||  ||||||||||| || || ||||||||| | ||| ||| ||||||||||||| | ||| |||||||| |||||||    
T  35163183 aggtttaattacacttttagtcctcgcattttgaccagctcacaaaaatggtcttgtctctttcaaatcgaacaaaaccgtcc-taaactatcatgtttt 35163281  T
Q  301 ttgcagttttagtccta 317  Q
    |||||||||||||||||    
T  35163282 ttgcagttttagtccta 35163298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 206 - 320
Target Start/End: Original strand, 31073146 - 31073267
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatc------ctccttaaactata-tgtt 298  Q
    ||||||||||||||||| ||   ||||||||||||  | |||||||||| |||||||||||||||||||||||||       ||||||||||||| | ||    
T  31073146 ttaattacacttttggtcctttaattttgaccaacacatgaaaatggtcctatcttttttaaatcgaacaaaatcgtttaagtccttaaactatattatt 31073245  T
Q  299 ttttgcagttttagtcctatct 320  Q
    |||||||||||||||| |||||    
T  31073246 ttttgcagttttagtcatatct 31073267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 195 - 317
Target Start/End: Complemental strand, 35163741 - 35163617
Alignment:
Q  195 aaaataaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactata 294  Q
    |||| ||||| ||||||||||||||||| |   ||||||||||| || |||||||||||  |  || ||| ||||| ||||||||| ||| |||||||||    
T  35163741 aaaaaaaaggcttaattacacttttggtccccgcattttgaccagctcacgaaaatggttctgcctctttcaaatcaaacaaaatcgtccctaaactata 35163642  T
Q  295 tg--ttttttgcagttttagtccta 317  Q
    ||  |||||||||||||||||||||    
T  35163641 tgttttttttgcagttttagtccta 35163617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 229 - 321
Target Start/End: Original strand, 28636318 - 28636409
Alignment:
Q  229 attttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgcagttttagtcctatctc 321  Q
    ||||||||||||| |||||| ||||| ||  | ||||||||||||||||||| | | ||||||||||| ||||||||||||||||| ||||||    
T  28636318 attttgaccaactcacgaaattggtcttacttcttttaaatcgaacaaaatcgttcctaaactatatg-tttttgcagttttagtcatatctc 28636409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 321
Target Start/End: Complemental strand, 28636669 - 28636624
Alignment:
Q  276 aaatcctccttaaactatatgttttttgcagttttagtcctatctc 321  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||    
T  28636669 aaatcgtccttaaactatatgttttttgcagttttagtcttatctc 28636624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 206 - 317
Target Start/End: Original strand, 33095717 - 33095829
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat-atgttttttgc 304  Q
    |||||| |||||||||| ||  |||||| | || ||  |||||||||||  | || ||| ||||||||||||| | ||| |||||||| |||||||||||    
T  33095717 ttaattgcacttttggtcctcgcatttttatcagctcgcgaaaatggtctcacctctttcaaatcgaacaaaaccgtccctaaactatcatgttttttgc 33095816  T
Q  305 agttttagtccta 317  Q
    |||||||||||||    
T  33095817 agttttagtccta 33095829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 202 - 275
Target Start/End: Original strand, 31242805 - 31242878
Alignment:
Q  202 aggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaaca 275  Q
    |||||||||||||||||||   ||  |||||||||||||| ||||||||| || |  |||||||||||||||||    
T  31242805 aggtttaattacacttttgaccctcgcattttgaccaactcacgaaaatgatcctgccttttttaaatcgaaca 31242878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 254
Target Start/End: Complemental strand, 22534267 - 22534219
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtc 254  Q
    ||||||||||||||||| ||   ||||||||||||| ||||||||||||    
T  22534267 ttaattacacttttggtcctcgtattttgaccaactcacgaaaatggtc 22534219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712 (Bit Score: 81; Significance: 4e-38; HSPs: 2)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 196 - 320
Target Start/End: Original strand, 6385 - 6509
Alignment:
Q  196 aaataaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatat 295  Q
    |||||| || |||||| |||||||||| |||||||||||| ||||| | |||||||||  ||||||||||||||||||||||||| |||||||| |||||    
T  6385 aaataatggcttaattgcacttttggtcctaccattttgatcaactcatgaaaatggtactatcttttttaaatcgaacaaaatcgtccttaaattatat 6484  T
Q  296 gttttttgcagttttagtcctatct 320  Q
    |||||||||||||||||||||||||    
T  6485 gttttttgcagttttagtcctatct 6509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0712; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 201 - 317
Target Start/End: Complemental strand, 6944 - 6827
Alignment:
Q  201 aaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatg-ttt 299  Q
    ||||||||||||| |||||||| ||  |||||||||||| |||||||| ||||| ||  | ||||||||||||||||||| | | ||||||| ||| |||    
T  6944 aaggtttaattactcttttggtccttgcattttgaccaatttacgaaattggtcttacatcttttaaatcgaacaaaatcgtacctaaactacatgtttt 6845  T
Q  300 tttgcagttttagtccta 317  Q
    ||||||||||||||||||    
T  6844 tttgcagttttagtccta 6827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 81; Significance: 4e-38; HSPs: 2)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 196 - 320
Target Start/End: Original strand, 6403 - 6527
Alignment:
Q  196 aaataaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatat 295  Q
    |||||| || |||||| |||||||||| |||||||||||| ||||| | |||||||||  ||||||||||||||||||||||||| |||||||| |||||    
T  6403 aaataatggcttaattgcacttttggtcctaccattttgatcaactcatgaaaatggtactatcttttttaaatcgaacaaaatcgtccttaaattatat 6502  T
Q  296 gttttttgcagttttagtcctatct 320  Q
    |||||||||||||||||||||||||    
T  6503 gttttttgcagttttagtcctatct 6527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 201 - 317
Target Start/End: Complemental strand, 6962 - 6845
Alignment:
Q  201 aaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatg-ttt 299  Q
    ||||||||||||| |||||||| ||  |||||||||||| |||||||| ||||| ||  | ||||||||||||||||||| | | ||||||| ||| |||    
T  6962 aaggtttaattactcttttggtccttgcattttgaccaatttacgaaattggtcttacatcttttaaatcgaacaaaatcgtacctaaactacatgtttt 6863  T
Q  300 tttgcagttttagtccta 317  Q
    ||||||||||||||||||    
T  6862 tttgcagttttagtccta 6845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 71; Significance: 4e-32; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 206 - 319
Target Start/End: Complemental strand, 46811 - 46697
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgtt-ttttgc 304  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||| ||| | ||||||||||||||||||| || |||||||||||||| |||||     
T  46811 ttaattacacttttggtcctaccattttgaccaactcacgaaaatggtcctatatattttaaatcgaacaaaatcgtctttaaactatatgtttttttgt 46712  T
Q  305 agttttagtcctatc 319  Q
    ||||||||| |||||    
T  46711 agttttagttctatc 46697  T

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Target: scaffold0097; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 200 - 321
Target Start/End: Original strand, 46263 - 46385
Alignment:
Q  200 aaaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatg-tt 298  Q
    ||||| |||||| |||||||||| ||  ||||||||||||||||||||||||||  || || ||||||||||||||||||| ||| ||||||||||| ||    
T  46263 aaaggcttaattgcacttttggtcctcgcattttgaccaacttacgaaaatggttctacctcttttaaatcgaacaaaatcatccctaaactatatgttt 46362  T
Q  299 ttttgcagttttagtcctatctc 321  Q
    |||||||||||||||| ||||||    
T  46363 ttttgcagttttagtcatatctc 46385  T

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Target: scaffold0007 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 206 - 317
Target Start/End: Complemental strand, 205910 - 205799
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat-atgttttttgc 304  Q
    |||||||||||||| || ||  |||||||||||||| |||||||||||| |  || ||| ||||||||||||| | ||| |||||||| ||| |||||||    
T  205910 ttaattacacttttagtcctcacattttgaccaactcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactatcatg-tttttgc 205812  T
Q  305 agttttagtccta 317  Q
    |||||||||||||    
T  205811 agttttagtccta 205799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 201 - 293
Target Start/End: Complemental strand, 210885 - 210793
Alignment:
Q  201 aaggtttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat 293  Q
    |||| ||||||||||||||||| ||  |||||||||||||| | |||||||||| |  || ||| ||||||||||||| | ||| ||||||||    
T  210885 aaggcttaattacacttttggtcctcacattttgaccaactcatgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactat 210793  T

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Target: scaffold1432 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold1432
Description:

Target: scaffold1432; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 206 - 316
Target Start/End: Complemental strand, 608 - 498
Alignment:
Q  206 ttaattacacttttggttctaccattttgaccaacttacgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactatatgttttttgca 305  Q
    ||||||||||||||| | ||  ||||||||| | || |||||||||||| |  || ||| |||||||||||||   ||  ||||||||||||||||||||    
T  608 ttaattacacttttgatcctcgcattttgacgagctcacgaaaatggtcttgcctctttcaaatcgaacaaaacagtctctaaactatatgttttttgca 509  T
Q  306 gttttagtcct 316  Q
    ||||| |||||    
T  508 gttttggtcct 498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 314
Target Start/End: Complemental strand, 159387 - 159315
Alignment:
Q  243 acgaaaatggtcatatcttttttaaatcgaacaaaatcctccttaaactat-atgttttttgcagttttagtc 314  Q
    |||||||||||||| ||| ||| ||||||||||||||| | | |||||||| || ||||||||||||||||||    
T  159387 acgaaaatggtcatgtctctttcaaatcgaacaaaatcgttcataaactatcatattttttgcagttttagtc 159315  T

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Target: scaffold0025 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 286 - 321
Target Start/End: Original strand, 78400 - 78435
Alignment:
Q  286 taaactatatgttttttgcagttttagtcctatctc 321  Q
    ||||||||||||||||||||||||||||||||||||    
T  78400 taaactatatgttttttgcagttttagtcctatctc 78435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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