View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10290_low_27 (Length: 263)
Name: NF10290_low_27
Description: NF10290
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10290_low_27 |
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Alignment Details
Target: chr2 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 5 - 247
Target Start/End: Complemental strand, 37060737 - 37060495
Alignment:
| Q |
5 |
agtgagatgaaagaaaaaggcacaaaagtatgatactttgctctctctctcgtccaataataatgaagttcatgagtcgacaaatgaaaatgtgtagtag |
104 |
Q |
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| T |
37060737 |
agtgaaatcaaagaaaaaggcacaaaagtatgatactttgctctctctctcgtccaataataatggagttcatgagccgacaaatgaaaatgtgtagtag |
37060638 |
T |
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| Q |
105 |
aagaatagaatgacgtttcatgtttgctttgacgttccgttatggtatggtgtggtgccaagtgctcttaaacaagatccaaaaccaaaggaaaaaaggt |
204 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37060637 |
aagaatagaatgacgtttcatgtttgctttgacgttccgttatggtatggtgtggtgccaagtgctcttaaacaagatccaaaaccaaaggaaaaaaggt |
37060538 |
T |
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| Q |
205 |
tcatcccttttgtcccttactcaatggctagggtcgagagagg |
247 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37060537 |
tcatcccttttgtcccttactcaatggctagggtcgagagagg |
37060495 |
T |
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