View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10290_low_30 (Length: 249)
Name: NF10290_low_30
Description: NF10290
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10290_low_30 |
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Alignment Details
Target: chr7 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 1698803 - 1698564
Alignment:
| Q |
1 |
cggtaagtagtggaatttcggtggttgagtctaagggagggtagcagttgagaaagataatttgatctggttttgtatttaaactgcataaaaaccatat |
100 |
Q |
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| T |
1698803 |
cggtaagtagtggaatttcggtggttgagtctaagggagggtagcagttgagaaagataatttgatctggttttgtatttaaactgcataaaaaccatat |
1698704 |
T |
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| Q |
101 |
tgatactcatgagtcatgaggtagcattatatatcaattgaaaaagatggtaaatgacttgtacaagtcacatatttataggactctgactcaagtttgt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1698703 |
tgatactcatgagtcatgaggtagcattatatatcaattgaaaaagacggtaaatgacttgtacaagtcacatatttataggactctgactcaagtttgt |
1698604 |
T |
|
| Q |
201 |
atctaactcaagatgaattacaactaagttattacctttg |
240 |
Q |
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||||||||| |||||||||||||||||||||||||||||| |
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| T |
1698603 |
atctaactctagatgaattacaactaagttattacctttg |
1698564 |
T |
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