View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10291_high_9 (Length: 325)
Name: NF10291_high_9
Description: NF10291
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10291_high_9 |
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Alignment Details
Target: chr5 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 39 - 318
Target Start/End: Complemental strand, 12637202 - 12636923
Alignment:
| Q |
39 |
atgtccaattcgagaattgggtcctaaaaccttaatgattttgcagtaaagactaactcatggctcaagtccaggtcattagtattgtccctaaatatct |
138 |
Q |
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| T |
12637202 |
atgtccaattagagtattgggtcctaaaaccctaatgattttgcagtaaagactaactcatggctcaagtccaggtcattagtattgtccctaaatatct |
12637103 |
T |
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| Q |
139 |
cacgcccacgacacttacttgattgaaaatgtgtttacaaatacactatcctcattgtaaagttatcaacctatcgccacccatcgtcaaccgtcattga |
238 |
Q |
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| T |
12637102 |
cacgcccacgacacttacttgattgaaaacgtgtttacaaatacactatcctcattgtaaagttatcaatctatcgccacccatcttcaaccgtcattga |
12637003 |
T |
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| Q |
239 |
tctcttaagcgaaagatattaggtccagtaaggatcaaatatcaacctgtttgcacaaacttaaaccatcattcatctca |
318 |
Q |
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||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12637002 |
tctctcaagccaaagatattaggtccagtaaggatcaaatatcaacctgtttgcacaaacttaaaccatcattcatctca |
12636923 |
T |
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