View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10291_low_9 (Length: 367)
Name: NF10291_low_9
Description: NF10291
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10291_low_9 |
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Alignment Details
Target: chr2 (Bit Score: 336; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 17 - 356
Target Start/End: Original strand, 29671840 - 29672179
Alignment:
| Q |
17 |
cttcccacgcattccacagatgaaaacagaaacactctggtgcatcaatccaaatcatctcagaagaatcttcagcattctttgataaaaccccgaacct |
116 |
Q |
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| T |
29671840 |
cttcccacgcattccacagatgaaaacagaaacactctggtgcatcaatccaaatcatctcagaagaatcttcagcattcttggataaaaccccgaacct |
29671939 |
T |
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| Q |
117 |
cgagactttctccttatcgtaaacaacaggcgacccaccacggatcatttcacccaatttaaacacaacttgttgatcaggcacaacaacgaaattctca |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29671940 |
cgagactttctccttatcgtaaacaacaggcgacccaccacggatcatttcacccaatttaaacacaacttgttgatcaggcacaacaacgaaattctca |
29672039 |
T |
|
| Q |
217 |
gtgatcgcgaagtcatgcatcatagtaggctgctccaacggaatctcaacgtccggagacttaactccggacgcatcaaaacgaaagtatttcaaataag |
316 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29672040 |
gtgatcgcgaagtcatgcatcatagtaggctgctccaacggaatctcaacgtccggagacttaactccggacgcatcaaaacgaaagtatttcaaataag |
29672139 |
T |
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| Q |
317 |
gcttttgaactacgtcatagctcaaagcatacatattctt |
356 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
29672140 |
gcttttgaactacgtcatagctcaaagcatacatattctt |
29672179 |
T |
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