View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10292_low_12 (Length: 255)
Name: NF10292_low_12
Description: NF10292
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10292_low_12 |
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Alignment Details
Target: chr5 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 28818157 - 28818400
Alignment:
| Q |
1 |
tttgtcttttgggattttgacaaatgatattgctttctaaaagctgtaaaaatttcatagtgagtgacgagttatttaaatatcagcttcttcaaggaaa |
100 |
Q |
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| T |
28818157 |
tttgtcttttgggattttgacaaatgatattgctttctaaaagctgtaaaaatttcatagtgagtgacgagttatttaaatatcagcttcttcaaggaaa |
28818256 |
T |
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| Q |
101 |
aaccacattgattttaacacattgtttgtttggcattaatggttgaaaactttctcttggctaagctgcaatcagtttcttccaccctaagcaagcttcc |
200 |
Q |
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||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28818257 |
aactacattgatattaacacattgtttgtttggcattaatggttgaaaactttctcttggctaagctgcaatcagtttcttccaccctaagcaagcttcc |
28818356 |
T |
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| Q |
201 |
aatttgatataaaataatgtagccatgtttgtttttatgatgtc |
244 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
28818357 |
aatttgatataaaataatgtagccatgtttgtttttatgttgtc |
28818400 |
T |
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