View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10293_low_5 (Length: 268)

Name: NF10293_low_5
Description: NF10293
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10293_low_5
NF10293_low_5
[»] chr1 (28 HSPs)
chr1 (1-93)||(44822090-44822182)
chr1 (159-252)||(44822230-44822323)
chr1 (1-93)||(24723420-24723512)
chr1 (17-93)||(7052007-7052083)
chr1 (168-246)||(21188142-21188220)
chr1 (159-251)||(22350529-22350621)
chr1 (1-56)||(16058383-16058437)
chr1 (1-68)||(51324420-51324487)
chr1 (1-56)||(19676639-19676694)
chr1 (1-56)||(21046118-21046173)
chr1 (1-68)||(7320663-7320730)
chr1 (159-242)||(20708160-20708243)
chr1 (1-56)||(42912977-42913032)
chr1 (175-241)||(46197862-46197927)
chr1 (172-241)||(7702983-7703052)
chr1 (161-241)||(7052115-7052195)
chr1 (12-56)||(20633714-20633758)
chr1 (21-60)||(8276079-8276118)
chr1 (159-242)||(22823311-22823394)
chr1 (21-60)||(38056762-38056801)
chr1 (159-242)||(39061188-39061271)
chr1 (175-241)||(29763749-29763814)
chr1 (175-241)||(50001346-50001411)
chr1 (1-54)||(22350646-22350699)
chr1 (21-60)||(4595935-4595974)
chr1 (159-241)||(24723560-24723642)
chr1 (1-38)||(13302847-13302884)
chr1 (175-211)||(34392666-34392702)
[»] chr5 (20 HSPs)
chr5 (159-254)||(17875914-17876009)
chr5 (1-93)||(17876094-17876186)
chr5 (1-93)||(31456851-31456943)
chr5 (1-93)||(36508702-36508794)
chr5 (162-246)||(31456716-31456800)
chr5 (22-93)||(30138064-30138135)
chr5 (159-241)||(30138183-30138265)
chr5 (166-241)||(21504009-21504084)
chr5 (161-241)||(36508845-36508925)
chr5 (1-56)||(7484930-7484985)
chr5 (1-56)||(19921566-19921621)
chr5 (1-56)||(21300113-21300168)
chr5 (175-241)||(265908-265973)
chr5 (175-241)||(17011598-17011663)
chr5 (175-241)||(29448710-29448775)
chr5 (4-54)||(21405700-21405751)
chr5 (2-52)||(31251961-31252011)
chr5 (18-56)||(31622053-31622091)
chr5 (23-56)||(20566482-20566515)
chr5 (1-50)||(21617998-21618047)
[»] chr2 (43 HSPs)
chr2 (159-252)||(24884220-24884313)
chr2 (1-93)||(357772-357864)
chr2 (1-93)||(1383612-1383704)
chr2 (1-93)||(24884361-24884453)
chr2 (159-254)||(22501717-22501812)
chr2 (159-254)||(22509651-22509746)
chr2 (168-254)||(45535783-45535869)
chr2 (168-254)||(19647091-19647177)
chr2 (159-251)||(18388337-18388429)
chr2 (181-249)||(45535658-45535726)
chr2 (19-93)||(22501860-22501935)
chr2 (19-93)||(22509794-22509869)
chr2 (168-254)||(45528398-45528484)
chr2 (1-56)||(5031198-5031253)
chr2 (1-56)||(9975857-9975912)
chr2 (1-56)||(17307414-17307469)
chr2 (162-254)||(20006073-20006167)
chr2 (1-56)||(22251517-22251572)
chr2 (1-56)||(24516114-24516169)
chr2 (1-56)||(24780909-24780964)
chr2 (159-241)||(1383752-1383834)
chr2 (175-241)||(12626548-12626614)
chr2 (1-54)||(25142133-25142186)
chr2 (1-56)||(19201269-19201324)
chr2 (1-56)||(27484546-27484601)
chr2 (1-56)||(40912248-40912303)
chr2 (1-60)||(3539760-3539819)
chr2 (1-56)||(24436576-24436631)
chr2 (1-56)||(36841192-36841247)
chr2 (159-242)||(25584403-25584486)
chr2 (172-241)||(28652664-28652733)
chr2 (159-207)||(28345136-28345184)
chr2 (4-54)||(19358820-19358871)
chr2 (1-56)||(37270627-37270682)
chr2 (175-241)||(18358084-18358149)
chr2 (175-241)||(21081086-21081151)
chr2 (191-241)||(21915494-21915544)
chr2 (175-249)||(23801355-23801429)
chr2 (175-241)||(25184059-25184124)
chr2 (1-54)||(18388259-18388312)
chr2 (1-46)||(27852605-27852650)
chr2 (1-53)||(2523816-2523868)
chr2 (1-49)||(22259974-22260021)
[»] scaffold0156 (1 HSPs)
scaffold0156 (1-93)||(16495-16587)
[»] scaffold0230 (2 HSPs)
scaffold0230 (1-93)||(6754-6846)
scaffold0230 (161-254)||(6896-6989)
[»] scaffold0040 (1 HSPs)
scaffold0040 (7-93)||(106126-106212)
[»] chr7 (44 HSPs)
chr7 (159-241)||(14274093-14274175)
chr7 (1-89)||(47974889-47974977)
chr7 (15-93)||(14274223-14274301)
chr7 (25-93)||(708523-708591)
chr7 (172-254)||(42565945-42566027)
chr7 (162-254)||(33060296-33060388)
chr7 (1-56)||(20620214-20620269)
chr7 (1-56)||(12127232-12127287)
chr7 (1-56)||(12322999-12323054)
chr7 (1-56)||(12465329-12465384)
chr7 (1-56)||(13147541-13147596)
chr7 (1-68)||(15095706-15095773)
chr7 (1-68)||(15140129-15140196)
chr7 (2-54)||(13698709-13698761)
chr7 (1-56)||(14180467-14180522)
chr7 (1-56)||(20214075-20214130)
chr7 (159-242)||(21661124-21661207)
chr7 (1-56)||(46386157-46386212)
chr7 (159-241)||(47974991-47975073)
chr7 (3-56)||(12372202-12372255)
chr7 (1-61)||(8135306-8135366)
chr7 (161-241)||(12754767-12754847)
chr7 (3-67)||(33002078-33002141)
chr7 (1-56)||(8851228-8851283)
chr7 (1-56)||(10277255-10277310)
chr7 (1-56)||(11067396-11067451)
chr7 (1-60)||(13132390-13132449)
chr7 (1-56)||(32433658-32433713)
chr7 (1-44)||(35771511-35771554)
chr7 (175-241)||(32160317-32160382)
chr7 (171-207)||(37539352-37539388)
chr7 (1-52)||(12557853-12557904)
chr7 (175-241)||(16550119-16550184)
chr7 (175-241)||(16615478-16615543)
chr7 (2-52)||(41284963-41285013)
chr7 (26-67)||(17070384-17070425)
chr7 (1-53)||(15623950-15624002)
chr7 (5-56)||(16999361-16999413)
chr7 (159-207)||(19195096-19195144)
chr7 (1-60)||(48807395-48807454)
chr7 (1-39)||(12754681-12754719)
chr7 (175-241)||(13315197-13315263)
chr7 (168-241)||(708630-708703)
chr7 (1-33)||(36685214-36685246)
[»] scaffold0149 (3 HSPs)
scaffold0149 (1-93)||(21502-21594)
scaffold0149 (1-55)||(29642-29696)
scaffold0149 (159-241)||(21410-21492)
[»] chr8 (35 HSPs)
chr8 (159-254)||(20517156-20517251)
chr8 (159-254)||(22344980-22345075)
chr8 (159-254)||(22356640-22356735)
chr8 (168-254)||(20879330-20879416)
chr8 (159-251)||(42265656-42265748)
chr8 (1-56)||(5082281-5082336)
chr8 (1-56)||(19140693-19140748)
chr8 (1-68)||(22532201-22532268)
chr8 (1-68)||(22536886-22536953)
chr8 (181-247)||(21676713-21676779)
chr8 (2-70)||(22317981-22318049)
chr8 (1-56)||(5761462-5761517)
chr8 (1-56)||(6573125-6573180)
chr8 (1-56)||(20083707-20083762)
chr8 (178-241)||(22483650-22483713)
chr8 (1-56)||(6101822-6101877)
chr8 (1-56)||(6202704-6202759)
chr8 (1-60)||(31722563-31722622)
chr8 (1-56)||(37292633-37292688)
chr8 (1-56)||(39936079-39936134)
chr8 (1-56)||(42817976-42818031)
chr8 (1-60)||(45469289-45469348)
chr8 (175-241)||(25657631-25657696)
chr8 (1-56)||(20178598-20178654)
chr8 (21-60)||(20022122-20022161)
chr8 (159-210)||(36305743-36305794)
chr8 (175-241)||(16198706-16198771)
chr8 (1-55)||(39694346-39694400)
chr8 (176-241)||(23478952-23479016)
chr8 (1-54)||(42265578-42265631)
chr8 (159-210)||(22708425-22708476)
chr8 (175-241)||(19880693-19880758)
chr8 (175-241)||(22610382-22610448)
chr8 (175-241)||(26454576-26454641)
chr8 (162-210)||(21678947-21678995)
[»] chr6 (25 HSPs)
chr6 (161-254)||(18585536-18585629)
chr6 (1-74)||(18585715-18585788)
chr6 (168-254)||(18982269-18982355)
chr6 (172-254)||(18459163-18459245)
chr6 (1-56)||(7827900-7827955)
chr6 (1-56)||(23150356-23150411)
chr6 (1-56)||(27330050-27330105)
chr6 (1-56)||(27390790-27390845)
chr6 (17-68)||(28948490-28948541)
chr6 (159-242)||(3006974-3007057)
chr6 (1-56)||(19655300-19655355)
chr6 (1-60)||(23501595-23501655)
chr6 (159-207)||(35057448-35057496)
chr6 (1-56)||(15890781-15890836)
chr6 (1-56)||(27125546-27125601)
chr6 (1-66)||(19401012-19401077)
chr6 (1-49)||(18703503-18703551)
chr6 (1-49)||(18709438-18709486)
chr6 (172-248)||(24506228-24506304)
chr6 (160-203)||(13285656-13285699)
chr6 (175-241)||(29045134-29045200)
chr6 (1-50)||(18928614-18928663)
chr6 (166-242)||(31166088-31166164)
chr6 (175-241)||(15891686-15891751)
chr6 (175-241)||(15900771-15900836)
[»] chr4 (28 HSPs)
chr4 (1-93)||(14549651-14549743)
chr4 (172-246)||(14477497-14477571)
chr4 (171-254)||(18462880-18462963)
chr4 (172-254)||(13164990-13165072)
chr4 (1-56)||(16998453-16998508)
chr4 (1-56)||(25091581-25091636)
chr4 (1-56)||(53630543-53630598)
chr4 (1-52)||(10356505-10356556)
chr4 (1-56)||(11425871-11425926)
chr4 (1-56)||(37019598-37019653)
chr4 (1-56)||(6633606-6633661)
chr4 (1-56)||(15115150-15115205)
chr4 (1-56)||(42875725-42875780)
chr4 (1-56)||(46001600-46001655)
chr4 (175-241)||(10694362-10694427)
chr4 (159-237)||(14353899-14353977)
chr4 (1-93)||(19434628-19434710)
chr4 (161-241)||(14549520-14549600)
chr4 (161-241)||(19434761-19434841)
chr4 (21-60)||(9638933-9638972)
chr4 (1-52)||(9924085-9924136)
chr4 (1-56)||(19610252-19610307)
chr4 (1-54)||(9870514-9870568)
chr4 (216-254)||(13043925-13043963)
chr4 (162-237)||(45314240-45314315)
chr4 (175-241)||(9622357-9622423)
chr4 (175-241)||(16296741-16296807)
chr4 (18-56)||(26921707-26921745)
[»] scaffold0338 (1 HSPs)
scaffold0338 (22-93)||(128-199)
[»] chr3 (44 HSPs)
chr3 (175-254)||(48631189-48631268)
chr3 (168-247)||(3160735-3160814)
chr3 (159-254)||(13522449-13522543)
chr3 (175-254)||(12155143-12155222)
chr3 (166-254)||(12151054-12151142)
chr3 (1-68)||(9510985-9511052)
chr3 (1-68)||(9518960-9519027)
chr3 (1-56)||(10563636-10563691)
chr3 (1-56)||(17044894-17044949)
chr3 (1-56)||(17518942-17518997)
chr3 (1-56)||(17533804-17533859)
chr3 (1-56)||(40807924-40807979)
chr3 (1-56)||(49900658-49900713)
chr3 (1-56)||(50348095-50348150)
chr3 (175-241)||(45803453-45803519)
chr3 (1-49)||(35064610-35064658)
chr3 (1-56)||(22306652-22306707)
chr3 (1-56)||(40812761-40812816)
chr3 (1-56)||(41172440-41172495)
chr3 (159-241)||(6805027-6805109)
chr3 (1-67)||(19568277-19568343)
chr3 (1-54)||(11563654-11563707)
chr3 (1-56)||(10311455-10311510)
chr3 (1-44)||(13185834-13185877)
chr3 (1-56)||(17539034-17539089)
chr3 (1-52)||(35960998-35961049)
chr3 (1-56)||(44274346-44274401)
chr3 (1-50)||(17694001-17694050)
chr3 (1-54)||(42324041-42324094)
chr3 (1-66)||(49968928-49968993)
chr3 (4-56)||(35354530-35354582)
chr3 (159-210)||(6003085-6003136)
chr3 (1-56)||(11259359-11259414)
chr3 (1-55)||(14508775-14508830)
chr3 (1-56)||(17047054-17047109)
chr3 (1-52)||(33565018-33565069)
chr3 (175-241)||(16979782-16979847)
chr3 (159-211)||(24177869-24177921)
chr3 (21-60)||(14641638-14641677)
chr3 (2-49)||(15931577-15931624)
chr3 (175-241)||(22652643-22652708)
chr3 (1-43)||(24177805-24177847)
chr3 (1-54)||(37038978-37039032)
chr3 (7-54)||(22146832-22146880)
[»] scaffold0007 (4 HSPs)
scaffold0007 (168-254)||(18969-19055)
scaffold0007 (161-246)||(158971-159056)
scaffold0007 (1-54)||(158891-158944)
scaffold0007 (159-201)||(16676-16718)
[»] scaffold0021 (2 HSPs)
scaffold0021 (166-247)||(16971-17052)
scaffold0021 (166-247)||(26502-26583)
[»] scaffold0092 (1 HSPs)
scaffold0092 (171-254)||(38554-38637)
[»] scaffold0058 (1 HSPs)
scaffold0058 (168-247)||(59764-59843)
[»] scaffold0217 (1 HSPs)
scaffold0217 (172-246)||(28579-28653)
[»] scaffold0180 (2 HSPs)
scaffold0180 (159-251)||(28476-28568)
scaffold0180 (1-54)||(28398-28451)
[»] scaffold0116 (2 HSPs)
scaffold0116 (159-251)||(35611-35703)
scaffold0116 (1-54)||(35533-35586)
[»] scaffold1800 (1 HSPs)
scaffold1800 (162-254)||(463-557)
[»] scaffold0439 (3 HSPs)
scaffold0439 (159-254)||(12098-12192)
scaffold0439 (1-55)||(12323-12377)
scaffold0439 (61-93)||(12221-12253)
[»] scaffold0848 (1 HSPs)
scaffold0848 (1-66)||(2090-2155)
[»] scaffold1941 (1 HSPs)
scaffold1941 (1-56)||(66-121)
[»] scaffold1283 (1 HSPs)
scaffold1283 (1-56)||(537-592)
[»] scaffold0241 (2 HSPs)
scaffold0241 (1-56)||(2492-2547)
scaffold0241 (1-56)||(3110-3165)
[»] scaffold0632 (1 HSPs)
scaffold0632 (2-56)||(1093-1147)
[»] scaffold0555 (1 HSPs)
scaffold0555 (159-241)||(8897-8979)
[»] scaffold0394 (1 HSPs)
scaffold0394 (172-254)||(7626-7708)
[»] scaffold0111 (2 HSPs)
scaffold0111 (2-56)||(12603-12657)
scaffold0111 (1-56)||(5311-5366)
[»] scaffold0026 (3 HSPs)
scaffold0026 (159-241)||(21992-22074)
scaffold0026 (1-56)||(146651-146706)
scaffold0026 (159-210)||(9926-9977)
[»] scaffold0004 (2 HSPs)
scaffold0004 (6-56)||(328364-328414)
scaffold0004 (19-56)||(72872-72909)
[»] scaffold0001 (3 HSPs)
scaffold0001 (2-56)||(31922-31976)
scaffold0001 (2-56)||(37229-37283)
scaffold0001 (1-56)||(77615-77670)
[»] scaffold0037 (3 HSPs)
scaffold0037 (1-57)||(113037-113093)
scaffold0037 (1-50)||(81501-81550)
scaffold0037 (21-57)||(117890-117926)
[»] scaffold1766 (1 HSPs)
scaffold1766 (1-56)||(765-820)
[»] scaffold1633 (1 HSPs)
scaffold1633 (1-56)||(1133-1188)
[»] scaffold0737 (1 HSPs)
scaffold0737 (1-56)||(4783-4838)
[»] scaffold0407 (1 HSPs)
scaffold0407 (1-56)||(11343-11398)
[»] scaffold0080 (1 HSPs)
scaffold0080 (1-56)||(21862-21917)
[»] scaffold0077 (1 HSPs)
scaffold0077 (1-56)||(34267-34322)
[»] scaffold0064 (1 HSPs)
scaffold0064 (1-56)||(58674-58729)
[»] scaffold0017 (2 HSPs)
scaffold0017 (171-254)||(23470-23553)
scaffold0017 (159-242)||(26560-26643)
[»] scaffold1939 (1 HSPs)
scaffold1939 (175-237)||(1-63)
[»] scaffold0113 (2 HSPs)
scaffold0113 (179-241)||(35362-35424)
scaffold0113 (9-56)||(35420-35467)
[»] scaffold0337 (1 HSPs)
scaffold0337 (168-248)||(3068-3148)
[»] scaffold0308 (1 HSPs)
scaffold0308 (159-235)||(13269-13345)
[»] scaffold0175 (1 HSPs)
scaffold0175 (1-68)||(8557-8625)
[»] scaffold0334 (1 HSPs)
scaffold0334 (1-56)||(446-501)
[»] scaffold0207 (1 HSPs)
scaffold0207 (1-56)||(13461-13516)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-68)||(3121-3188)
[»] scaffold0020 (2 HSPs)
scaffold0020 (1-56)||(169068-169123)
scaffold0020 (1-56)||(143539-143594)
[»] scaffold0462 (3 HSPs)
scaffold0462 (159-241)||(11093-11173)
scaffold0462 (159-207)||(1174-1222)
scaffold0462 (159-207)||(6680-6728)
[»] scaffold0057 (1 HSPs)
scaffold0057 (175-249)||(69970-70043)
[»] scaffold0046 (1 HSPs)
scaffold0046 (176-241)||(21895-21959)
[»] scaffold0125 (1 HSPs)
scaffold0125 (159-243)||(18212-18296)
[»] scaffold0083 (3 HSPs)
scaffold0083 (19-67)||(10840-10888)
scaffold0083 (175-241)||(1807-1872)
scaffold0083 (21-53)||(5124-5156)
[»] scaffold0859 (1 HSPs)
scaffold0859 (2-61)||(4605-4664)
[»] scaffold0328 (1 HSPs)
scaffold0328 (21-60)||(18731-18770)
[»] scaffold0220 (1 HSPs)
scaffold0220 (21-60)||(13872-13911)
[»] scaffold0008 (1 HSPs)
scaffold0008 (1-68)||(135573-135640)
[»] scaffold0515 (1 HSPs)
scaffold0515 (175-229)||(4911-4964)
[»] scaffold0436 (1 HSPs)
scaffold0436 (175-241)||(8830-8895)
[»] scaffold0306 (1 HSPs)
scaffold0306 (175-229)||(4911-4964)
[»] scaffold0165 (1 HSPs)
scaffold0165 (172-254)||(31787-31869)
[»] scaffold0138 (1 HSPs)
scaffold0138 (175-241)||(20967-21032)
[»] scaffold0061 (2 HSPs)
scaffold0061 (175-241)||(14703-14768)
scaffold0061 (175-241)||(23761-23826)
[»] scaffold0034 (1 HSPs)
scaffold0034 (175-241)||(29333-29398)
[»] scaffold0023 (1 HSPs)
scaffold0023 (216-254)||(163192-163230)
[»] scaffold0174 (2 HSPs)
scaffold0174 (19-56)||(11318-11355)
scaffold0174 (19-56)||(5198-5235)
[»] scaffold0213 (1 HSPs)
scaffold0213 (159-207)||(19019-19066)
[»] scaffold0036 (1 HSPs)
scaffold0036 (1-45)||(78254-78298)
[»] scaffold0019 (1 HSPs)
scaffold0019 (1-36)||(24200-24235)
[»] scaffold0594 (1 HSPs)
scaffold0594 (175-241)||(2110-2176)
[»] scaffold0035 (1 HSPs)
scaffold0035 (159-241)||(43888-43969)
[»] scaffold1434 (1 HSPs)
scaffold1434 (169-242)||(1470-1543)
[»] scaffold0285 (1 HSPs)
scaffold0285 (19-56)||(19689-19726)
[»] scaffold0047 (1 HSPs)
scaffold0047 (23-56)||(78992-79025)
[»] scaffold0251 (1 HSPs)
scaffold0251 (1-49)||(20155-20202)
[»] scaffold0056 (1 HSPs)
scaffold0056 (1-60)||(67043-67103)


Alignment Details
Target: chr1 (Bit Score: 89; Significance: 6e-43; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 44822090 - 44822182
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaa 93  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44822090 gtaggttgtagttctggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaa 44822182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 159 - 252
Target Start/End: Original strand, 44822230 - 44822323
Alignment:
Q  159 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggtgat 252  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  44822230 ggttttgaattgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgttcaggttgtagaataacaataggtgat 44822323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 24723420 - 24723512
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaa 93  Q
    |||| |||||||| |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  24723420 gtagattgtagttttggaaatttgagaattatgtttagaagttgtaattggttgttttaattgtagaattgattgttgaaattaagatgttaa 24723512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 7052007 - 7052083
Alignment:
Q  17 gaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaa 93  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  7052007 gaaatttgggaattaggtttagaaattgtaattggttgttttaattgtagaattgattgttgaaattaagatgttaa 7052083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 168 - 246
Target Start/End: Original strand, 21188142 - 21188220
Alignment:
Q  168 ttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaata 246  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||| |||||||||||||| ||||    
T  21188142 ttgcaatttgattgttgaaagtgtaggtaatccaatgaattaatataaaaattgatgttcaggttgtagaataagaata 21188220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 251
Target Start/End: Complemental strand, 22350621 - 22350529
Alignment:
Q  159 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggtga 251  Q
    |||||||| ||||||||||||||||||| ||||||||||| ||||||||||| |||  |||||||||| |||||||||| ||| |||| ||||    
T  22350621 ggttttgaattgcaatttgattgttgaaggtgtaggtaattcaatgaattaatataaaaattgatgttcaggttgtagagtaataataagtga 22350529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 16058383 - 16058437
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  16058383 gtaggttgtagttatggaaatttgggaattaggttt-gaagttgtaattggttgtt 16058437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 51324487 - 51324420
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaa 68  Q
    ||||||||||||| ||| || |||||||||||||||| ||||||||||||||||||||||| ||||||    
T  51324487 gtaggttgtagttttgggaaattgggaattaggtttaaaagttgtaattggttgttttaatagtagaa 51324420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 19676694 - 19676639
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||  |||||||||||||||||| |||||||||||||||||||    
T  19676694 gtaggttgtagttatgagaatttgggaattaggttttgaagttgtaattggttgtt 19676639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 21046118 - 21046173
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||    
T  21046118 gtaggttgtagttatgggaatttgggaattaagttttgaagttgtaattggttgtt 21046173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 7320663 - 7320730
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaa 68  Q
    |||| |||||||| ||| ||||||||||||| ||||||| |||||||||||||| |||||| ||||||    
T  7320663 gtagattgtagttttgggaatttgggaattatgtttagatgttgtaattggttgatttaatagtagaa 7320730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 242
Target Start/End: Original strand, 20708160 - 20708243
Alignment:
Q  159 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataac 242  Q
    |||||||| ||||||||||||| ||||||||||| |||||||||| ||||||  |   | ||||||||||||||||||| ||||    
T  20708160 ggttttgaattgcaatttgattcttgaaagtgtaagtaatccaataaattaatgtgaaagttgatgtttaggttgtagagtaac 20708243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 42913032 - 42912977
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||| ||| ||||| |||||||||||| |||||||||||||||||||    
T  42913032 gtaggttgtagttgtgggaatttaggaattaggttttgaagttgtaattggttgtt 42912977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 46197862 - 46197927
Alignment:
Q  175 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    ||||||||| |||| ||||||||||||||||||||||||| ||||||| ||| ||| ||||||||||    
T  46197862 ttgattgtt-aaagagtaggtaatccaatgaattaacataagaattgaagttcaggctgtagaataa 46197927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 7703052 - 7702983
Alignment:
Q  172 aatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    ||||||||||||||||||||||||||||||||| || |   |   |||||||||||||||||||||||||    
T  7703052 aatttgattgttgaaagtgtaggtaatccaatggatcattgtgaaaattgatgtttaggttgtagaataa 7702983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 241
Target Start/End: Original strand, 7052115 - 7052195
Alignment:
Q  161 ttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    |||||| ||||||||||||||||||||| ||||||||||  |||||||||  ||  ||||| |||| |||||||| |||||    
T  7052115 ttttgaattgcaatttgattgttgaaagagtaggtaatctgatgaattaaggtaataattggtgttcaggttgtaaaataa 7052195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 20633714 - 20633758
Alignment:
Q  12 ttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    |||||| |||||||||||||||||| |||||||||||||||||||    
T  20633714 ttatgggaatttgggaattaggttttgaagttgtaattggttgtt 20633758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 8276079 - 8276118
Alignment:
Q  21 tttgggaattaggtttagaagttgtaattggttgttttaa 60  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  8276079 tttgggaattaggtttagaagttgtaattggttgatttaa 8276118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 242
Target Start/End: Original strand, 22823311 - 22823394
Alignment:
Q  159 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataac 242  Q
    |||||||| ||||||||||||| ||||||||||| ||||| | |||||||||  |   | ||||||||||||||||||| ||||    
T  22823311 ggttttgaattgcaatttgattcttgaaagtgtaagtaattcgatgaattaatgtgaaagttgatgtttaggttgtagagtaac 22823394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 38056762 - 38056801
Alignment:
Q  21 tttgggaattaggtttagaagttgtaattggttgttttaa 60  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  38056762 tttgggaattaggtttagaagttgtaattggttgatttaa 38056801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 242
Target Start/End: Complemental strand, 39061271 - 39061188
Alignment:
Q  159 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataac 242  Q
    |||||||| ||| ||||||||| ||||||||||| ||||||| |||||||||  |   | ||||||||||||||||||| ||||    
T  39061271 ggttttgaattgtaatttgattcttgaaagtgtaagtaatccgatgaattaatgtgaaagttgatgtttaggttgtagagtaac 39061188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 29763749 - 29763814
Alignment:
Q  175 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    ||||||||| |||| ||||||||| ||||||||||||||| ||||||| ||||||  ||||||||||    
T  29763749 ttgattgtt-aaagagtaggtaatacaatgaattaacataagaattgaagtttagactgtagaataa 29763814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 50001411 - 50001346
Alignment:
Q  175 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    ||||||||| |||| ||||||||| ||||||||||||||| ||||||| ||| ||| ||||||||||    
T  50001411 ttgattgtt-aaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataa 50001346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 22350699 - 22350646
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttg 54  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||| || ||||||    
T  22350699 gtaggttgtagttttgggaatttgggaattagggttagaagttgcaaatggttg 22350646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 4595935 - 4595974
Alignment:
Q  21 tttgggaattaggtttagaagttgtaattggttgttttaa 60  Q
    |||||||||||| ||||||||||||||||||||| |||||    
T  4595935 tttgggaattagatttagaagttgtaattggttgatttaa 4595974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 24723560 - 24723642
Alignment:
Q  159 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    |||||| | ||||||||||||||||||||| ||| |||||   |||||||||  ||  ||||| |||| ||||||||||||||    
T  24723560 ggtttttaattgcaatttgattgttgaaagagtatgtaatatgatgaattaaggtaataattggtgttcaggttgtagaataa 24723642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 13302884 - 13302847
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttag 38  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  13302884 gtaggttgtagttttgggaatttgggaattaggtttag 13302847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 34392702 - 34392666
Alignment:
Q  175 ttgattgttgaaagtgtaggtaatccaatgaattaac 211  Q
    |||||||||||||| |||||||||||| |||||||||    
T  34392702 ttgattgttgaaagagtaggtaatccattgaattaac 34392666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 88; Significance: 2e-42; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 159 - 254
Target Start/End: Complemental strand, 17876009 - 17875914
Alignment:
Q  159 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggtgatgt 254  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  17876009 ggttttgaattgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgttcaggttgtagaataacaataggtgatgt 17875914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 17876186 - 17876094
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaa 93  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  17876186 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtcttaattgtagaattgattgttggaattaagatgttaa 17876094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 31456943 - 31456851
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaa 93  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  31456943 gtaggttgtagttttggaaatttggaaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttgaaattaagatgttaa 31456851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 36508702 - 36508794
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaa 93  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  36508702 gtaggttgtagttttggaaatttgggaattatgtttagaagttgtaattggttgttttaattgtagaattgattgatgaaattaagatgttaa 36508794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 162 - 246
Target Start/End: Complemental strand, 31456800 - 31456716
Alignment:
Q  162 tttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaata 246  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  31456800 tttgaattgcaatttgattgttgaaagtgtaggtaattcaatgaattaacatatgaattgatgttcaggttgtagaataacaata 31456716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 22 - 93
Target Start/End: Original strand, 30138064 - 30138135
Alignment:
Q  22 ttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaa 93  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30138064 ttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaa 30138135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 30138183 - 30138265
Alignment:
Q  159 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||| ||||||||||||||    
T  30138183 ggttttgaattgcaatttgattgttgaaagtgtaggcaatccaatgaattaacatatgatatgatgttcaggttgtagaataa 30138265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 241
Target Start/End: Complemental strand, 21504084 - 21504009
Alignment:
Q  166 atttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    |||||||| || ||||||||||| |||||| |||||||||||||||||| ||| ||||||| ||||||||||||||    
T  21504084 atttgcaaattcattgttgaaagagtaggtgatccaatgaattaacataagaactgatgttcaggttgtagaataa 21504009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 161 - 241
Target Start/End: Original strand, 36508845 - 36508925
Alignment:
Q  161 ttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    |||||| ||||||||||||||||||||| ||||||||||  |||||||||  ||  ||||| |||||||||||||||||||    
T  36508845 ttttgaattgcaatttgattgttgaaagagtaggtaatctgatgaattaaggtaataattggtgtttaggttgtagaataa 36508925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 7484985 - 7484930
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||  |||||| ||||||||||| |||||||||||||||||||    
T  7484985 gtaggttgtagttatgagaatttgagaattaggttttgaagttgtaattggttgtt 7484930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 19921621 - 19921566
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    |||||||||| ||||||||||||||||||||||||| |||||| ||||| ||||||    
T  19921621 gtaggttgtaattatggaaatttgggaattaggttttgaagttataattagttgtt 19921566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 21300113 - 21300168
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    |||||| |||||||||| |||||| ||||||||||| |||||||||||||||||||    
T  21300113 gtaggtagtagttatgggaatttgagaattaggttttgaagttgtaattggttgtt 21300168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 265973 - 265908
Alignment:
Q  175 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    ||||||||| |||| |||||||||||| |||||||||||| ||||||| ||| ||| ||||||||||    
T  265973 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 265908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 17011663 - 17011598
Alignment:
Q  175 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    ||||||||| |||| ||||||||| ||||||||||||||| ||||||| ||| ||| ||||||||||    
T  17011663 ttgattgtt-aaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataa 17011598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 29448775 - 29448710
Alignment:
Q  175 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    ||||||||| |||| |||||||| |||||||||||||||| ||||||| ||| ||| ||||||||||    
T  29448775 ttgattgtt-aaagagtaggtaaaccaatgaattaacataagaattgaagttcaggctgtagaataa 29448710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 21405700 - 21405751
Alignment:
Q  4 ggttgtagttatggaaatttgggaa-ttaggtttagaagttgtaattggttg 54  Q
    |||||||||| ||| |||||||||| ||||| ||||||||||||||||||||    
T  21405700 ggttgtagttttgggaatttgggaaattagggttagaagttgtaattggttg 21405751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 31251961 - 31252011
Alignment:
Q  2 taggttgtagttatggaaatttgggaattaggtttagaagttgtaattggt 52  Q
    |||||||||||| | | |||||| |||||||||||||||||| ||||||||    
T  31251961 taggttgtagttttaggaatttgagaattaggtttagaagttataattggt 31252011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 31622091 - 31622053
Alignment:
Q  18 aaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||||| ||||| |||||||||||||    
T  31622091 aaatttgggaattaggttttgaagtcgtaattggttgtt 31622053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 20566515 - 20566482
Alignment:
Q  23 tgggaattaggtttagaagttgtaattggttgtt 56  Q
    |||||||||||||| |||||||||||||||||||    
T  20566515 tgggaattaggttttgaagttgtaattggttgtt 20566482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 21617998 - 21618047
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattg 50  Q
    ||||||||||||| ||| |||||| |||||||| |||||||||| |||||    
T  21617998 gtaggttgtagttttgggaatttgagaattagggttagaagttgaaattg 21618047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 82; Significance: 8e-39; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 159 - 252
Target Start/End: Complemental strand, 24884313 - 24884220
Alignment:
Q  159 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggtgat 252  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  24884313 ggttttgaattgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgttcaggttatagaataacaataggtgat 24884220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 357864 - 357772
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaa 93  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  357864 gtaggttgtagtttttgaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttgaaattaagatgttaa 357772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 1383612 - 1383704
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaa 93  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  1383612 gtaggttgtagttttggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgtagaaattaagatgttaa 1383704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 24884453 - 24884361
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaa 93  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  24884453 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtcttaattgtagaattgattgttggaattaagatattaa 24884361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 159 - 254
Target Start/End: Complemental strand, 22501812 - 22501717
Alignment:
Q  159 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggtgatgt 254  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||| |||||||    
T  22501812 ggttttgaattgcaatttgtttgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgttcaagttgtggaataacaatatgtgatgt 22501717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 159 - 254
Target Start/End: Complemental strand, 22509746 - 22509651
Alignment:
Q  159 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggtgatgt 254  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||| |||||||    
T  22509746 ggttttgaattgcaatttgtttgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgttcaagttgtggaataacaatatgtgatgt 22509651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 168 - 254
Target Start/End: Complemental strand, 45535869 - 45535783
Alignment:
Q  168 ttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggtgatgt 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||| ||||    
T  45535869 ttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacataaaaattgatgttcaggttgtagaataacaataggtaatgt 45535783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 168 - 254
Target Start/End: Complemental strand, 19647177 - 19647091
Alignment:
Q  168 ttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggtgatgt 254  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||    
T  19647177 ttgcaaattgattgttgaaaatgtaggtaatccaatgaattaacataagaattgatgttcaggttgtagaataacaataggtaatgt 19647091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 159 - 251
Target Start/End: Original strand, 18388337 - 18388429
Alignment:
Q  159 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggtga 251  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||  |||||||||| |||||||||| ||| |||| ||||    
T  18388337 ggttttgaattgcaatttgattgttgaaggtgtaggtaatccaatgaattaatataaaaattgatgttcaggttgtagagtaataataagtga 18388429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 45535726 - 45535658
Alignment:
Q  181 gttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggt 249  Q
    ||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||    
T  45535726 gttgaaagtgtaggtaatccaatgaattaacataaaaattgatgttcaggttgtagaataacaataggt 45535658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 22501935 - 22501860
Alignment:
Q  19 aatttgggaa-ttaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaa 93  Q
    |||||||||| ||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  22501935 aatttgggaaattagggttagaagttgtgattggttgttttaattgtaaaattgattgttggaattaagatgttaa 22501860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 19 - 93
Target Start/End: Complemental strand, 22509869 - 22509794
Alignment:
Q  19 aatttgggaa-ttaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaa 93  Q
    |||||||||| ||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  22509869 aatttgggaaattagggttagaagttgtgattggttgttttaattgtaaaattgattgttggaattaagatgttaa 22509794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 168 - 254
Target Start/End: Complemental strand, 45528484 - 45528398
Alignment:
Q  168 ttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggtgatgt 254  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||   |||||||||| ||||| |||||||||||||||| ||||    
T  45528484 ttgcaatttgattgttgaaagtgtatgtaatcaaatgaattaacattaaaattgatgttcaggttatagaataacaataggtaatgt 45528398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 5031198 - 5031253
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  5031198 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 5031253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 9975912 - 9975857
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  9975912 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 9975857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 17307469 - 17307414
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  17307469 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 17307414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 162 - 254
Target Start/End: Original strand, 20006073 - 20006167
Alignment:
Q  162 tttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacat--atgaattgatgtttaggttgtagaataacaataggtgatgt 254  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||| ||  |  || ||||||| | |||||||||||||||||||| ||||    
T  20006073 tttgaattgcaatttgattgttgaaagtgtaggtaatcgaatgaattaatataaaaaaaatgatgttcatgttgtagaataacaataggtaatgt 20006167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 22251517 - 22251572
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  22251517 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 22251572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 24516169 - 24516114
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  24516169 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 24516114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 24780909 - 24780964
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  24780909 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 24780964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 1383752 - 1383834
Alignment:
Q  159 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    |||||||| ||||||||||||||||||||| ||||||||||| |||||||||| ||  ||||| | || ||||||||||||||    
T  1383752 ggttttgaattgcaatttgattgttgaaagagtaggtaatccgatgaattaacgtaataattggtcttcaggttgtagaataa 1383834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 12626548 - 12626614
Alignment:
Q  175 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    |||||||||||||| ||||||||||| ||||||||||| | ||||||||||| ||||||||||||||    
T  12626548 ttgattgttgaaagagtaggtaatccgatgaattaacagaagaattgatgttcaggttgtagaataa 12626614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 25142186 - 25142133
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttg 54  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  25142186 gtaggttgtagttttgggaatttgggaattaggtttagaagttgtaattggttg 25142133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 19201269 - 19201324
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||| | |||||||||||||||||| |||||||||||||||||||    
T  19201269 gtaggttgtagttataggaatttgggaattaggttttgaagttgtaattggttgtt 19201324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 27484546 - 27484601
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||    
T  27484546 gtaggttgtagttatgggaatttgggaattaagttttgaagttgtaattggttgtt 27484601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 40912303 - 40912248
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||    
T  40912303 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtagttggttgtt 40912248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 3539819 - 3539760
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaa 60  Q
    ||||||||||||| | | |||||| ||||||||||||||||||||||||||||| |||||    
T  3539819 gtaggttgtagtttttggaatttgagaattaggtttagaagttgtaattggttgatttaa 3539760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 24436631 - 24436576
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| ||||||| |||||||||| |||||||||||| ||||||    
T  24436631 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaattagttgtt 24436576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 36841247 - 36841192
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| ||||| | |||||||||| |||||||||||||||||||    
T  36841247 gtaggttgtagttatgggaatttagaaattaggttttgaagttgtaattggttgtt 36841192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 242
Target Start/End: Original strand, 25584403 - 25584486
Alignment:
Q  159 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataac 242  Q
    |||||||| || |||||||||| ||||||||||| ||||||| |||||||||  |   | ||||||||||||||||||| ||||    
T  25584403 ggttttgaattacaatttgattcttgaaagtgtaagtaatccgatgaattaatgtgaaagttgatgtttaggttgtagagtaac 25584486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 28652664 - 28652733
Alignment:
Q  172 aatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    ||||| |||||| |||| |||||||||||||||||||||  ||  |||||||||| |||| |||||||||    
T  28652664 aatttaattgttaaaagagtaggtaatccaatgaattaaggtaataattgatgttcaggtagtagaataa 28652733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 28345136 - 28345184
Alignment:
Q  159 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaat 207  Q
    |||||||| || |||||||||| || |||||||||||||||||||||||    
T  28345136 ggttttgaatttcaatttgatttttaaaagtgtaggtaatccaatgaat 28345184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 19358871 - 19358820
Alignment:
Q  4 ggttgtagttatggaaatttgggaa-ttaggtttagaagttgtaattggttg 54  Q
    |||||||||| ||| |||||||||| ||||| ||||||||||||||||||||    
T  19358871 ggttgtagttttgggaatttgggaaattagggttagaagttgtaattggttg 19358820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 37270682 - 37270627
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||  |||||| |||||| |||| ||||||||||| |||||||    
T  37270682 gtaggttgtagttatgagaatttgagaattaagttttgaagttgtaatgggttgtt 37270627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 18358084 - 18358149
Alignment:
Q  175 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    ||||||||| |||| ||| ||||| ||||||||||||||| ||||||| ||| ||| ||||||||||    
T  18358084 ttgattgtt-aaagagtatgtaattcaatgaattaacataagaattgaagttcaggctgtagaataa 18358149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 21081086 - 21081151
Alignment:
Q  175 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    ||||||||| |||| ||||||||  ||||||||||||||| ||||||| ||| ||| ||||||||||    
T  21081086 ttgattgtt-aaagagtaggtaaaacaatgaattaacataagaattgaagttcaggctgtagaataa 21081151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 241
Target Start/End: Complemental strand, 21915544 - 21915494
Alignment:
Q  191 taggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    |||||||| ||||||||||||||| ||||||| ||| ||| ||||||||||    
T  21915544 taggtaattcaatgaattaacataagaattgaagttcaggctgtagaataa 21915494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 249
Target Start/End: Complemental strand, 23801429 - 23801355
Alignment:
Q  175 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggt 249  Q
    |||||||||||||| |||||||| || |||||||||  ||  || || |||| |||||||||||||| |||||||    
T  23801429 ttgattgttgaaagagtaggtaacccgatgaattaaggtaataactggtgttcaggttgtagaataataataggt 23801355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 25184124 - 25184059
Alignment:
Q  175 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    ||||||||| |||| ||||||||| ||||||||||||||| ||||||| ||| ||  ||||||||||    
T  25184124 ttgattgtt-aaagagtaggtaattcaatgaattaacataagaattgaagttcagactgtagaataa 25184059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 18388259 - 18388312
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttg 54  Q
    ||||||||||||| ||| ||||||||||||| | |||||||||| || ||||||    
T  18388259 gtaggttgtagttttgggaatttgggaattatggttagaagttgcaaatggttg 18388312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 27852650 - 27852605
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgta 46  Q
    ||||||||| ||| ||| |||||||||||||| |||||||||||||    
T  27852650 gtaggttgttgttttgggaatttgggaattagatttagaagttgta 27852605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 2523816 - 2523868
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggtt 53  Q
    |||||||||| |||||| ||||||| ||||||||||  || ||||||||||||    
T  2523816 gtaggttgtatttatgggaatttggaaattaggtttttaaattgtaattggtt 2523868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 22260021 - 22259974
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaatt 49  Q
    |||||||||||||  |||| ||||||||||||| |||||||||||||||    
T  22260021 gtaggttgtagtttaggaa-tttgggaattaggcttagaagttgtaatt 22259974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 16587 - 16495
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaa 93  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  16587 gtaggttgtagttttggaaatttggcaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttgaaattaagatgttaa 16495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 77; Significance: 8e-36; HSPs: 2)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 6754 - 6846
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaa 93  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  6754 gtaggttgtagttttggaaatttaggaattaggtttagaagttgtaattggttgttttaattgtagaattgatttttgaaattaagatgttaa 6846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 161 - 254
Target Start/End: Original strand, 6896 - 6989
Alignment:
Q  161 ttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggtgatgt 254  Q
    |||||| ||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||    
T  6896 ttttgaattgcaatttgattgttgaaagtgtatgtaattcaatgaattaacataagaattgatgttcaggttgtagaataacaatatgtgatgt 6989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 7 - 93
Target Start/End: Original strand, 106126 - 106212
Alignment:
Q  7 tgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaa 93  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  106126 tgtagttttggaaatttgggaattaggtttagacgttgtaattggttgttttaattgtagaattgattgttgaaattaagatgttaa 106212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 1e-34; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 14274175 - 14274093
Alignment:
Q  159 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  14274175 ggttttgaattgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgttcaggttgtagaataa 14274093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 47974889 - 47974977
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatg 89  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  47974889 gtaggttgtagttttggaaatttgggaattatgtttagaagttgtaattggttgttttaattgtagagttgattgttgaaattaagatg 47974977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 14274301 - 14274223
Alignment:
Q  15 tggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaa 93  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  14274301 tggaaaattgggaattaggtttagaagttgtaatttgttgttttaattgtagaattgattgttggaattaaggtgttaa 14274223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 25 - 93
Target Start/End: Original strand, 708523 - 708591
Alignment:
Q  25 ggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaa 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  708523 ggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttgaaattaagatgttaa 708591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 172 - 254
Target Start/End: Original strand, 42565945 - 42566027
Alignment:
Q  172 aatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggtgatgt 254  Q
    ||||||||||||||||||||| |||||||||||||||||||||  |||||||||| |||||||||||||||||||||| ||||    
T  42565945 aatttgattgttgaaagtgtacgtaatccaatgaattaacatagaaattgatgttcaggttgtagaataacaataggtaatgt 42566027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 162 - 254
Target Start/End: Complemental strand, 33060388 - 33060296
Alignment:
Q  162 tttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggtgatgt 254  Q
    ||||| ||||||||||||||||||||||||||| ||||||| ||||||| |||  |||||||||| |||| ||||||||||||||||| ||||    
T  33060388 tttgaattgcaatttgattgttgaaagtgtaggcaatccaaagaattaatataaaaattgatgttcaggtcgtagaataacaataggtaatgt 33060296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 20620269 - 20620214
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  20620269 gtaggttgtagttatggaaatttgggaattaggttttgaagttgtaattggttgtt 20620214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 12127232 - 12127287
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  12127232 gtaggttttagttatggaaatttgggaattaggttttgaagttgtaattggttgtt 12127287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 12322999 - 12323054
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  12322999 gtaggttgtagttatggaaatttgggaattaggttttgaagttgtacttggttgtt 12323054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 12465329 - 12465384
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  12465329 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 12465384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 13147541 - 13147596
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  13147541 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 13147596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 15095706 - 15095773
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaa 68  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||| |||| |||||| ||||||    
T  15095706 gtaggttgtagttttgggaatttgggaattaggtttagaagttgtaattagttgatttaatagtagaa 15095773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 15140196 - 15140129
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaa 68  Q
    ||||||||||||| ||| ||||||||||||||||||| |||||||||||||||| |||||| ||||||    
T  15140196 gtaggttgtagttttgggaatttgggaattaggtttaaaagttgtaattggttgatttaatagtagaa 15140129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 13698709 - 13698761
Alignment:
Q  2 taggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttg 54  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  13698709 taggttgtagttttggaaatttgggaattagggttagaagttgtaattggttg 13698761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 14180467 - 14180522
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||    
T  14180467 gtaggttgtagttatgggaatttgggaattatgttttgaagttgtaattggttgtt 14180522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 20214130 - 20214075
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||    
T  20214130 gtaggttgtagttatgggaatttgggaattaagttttgaagttgtaattggttgtt 20214075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 242
Target Start/End: Complemental strand, 21661207 - 21661124
Alignment:
Q  159 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataac 242  Q
    |||||||| ||||||||||||| ||||||||||| |||||||||||||||||  |   | ||||||||||||||||||| ||||    
T  21661207 ggttttgaattgcaatttgattcttgaaagtgtaagtaatccaatgaattaatgtgaaagttgatgtttaggttgtagagtaac 21661124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 46386157 - 46386212
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||    
T  46386157 gtaggttgtagttatgggaatttgagaattaggttttgaagttgtaattggttgtt 46386212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 47974991 - 47975073
Alignment:
Q  159 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    |||||||| |||||||||||||||||||||  |||||||||| |||||||||  ||  ||||| |||| ||||||||||||||    
T  47974991 ggttttgaattgcaatttgattgttgaaagattaggtaatccgatgaattaaggtaataattggtgttcaggttgtagaataa 47975073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 12372255 - 12372202
Alignment:
Q  3 aggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||| |||||| ||||||||||| |||||||||||||||||||    
T  12372255 aggttgtagttatgggaatttgagaattaggttttgaagttgtaattggttgtt 12372202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 8135306 - 8135366
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaat 61  Q
    ||||||||||||| | | |||||| ||||||||||||||||||||||||||||| ||||||    
T  8135306 gtaggttgtagttttaggaatttgagaattaggtttagaagttgtaattggttgatttaat 8135366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 241
Target Start/End: Original strand, 12754767 - 12754847
Alignment:
Q  161 ttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    |||||| ||||||||||||||||||||| ||||||||||  |||||||||  ||  ||||| |||| ||||||||||||||    
T  12754767 ttttgaattgcaatttgattgttgaaagagtaggtaatctgatgaattaaagtaataattggtgttcaggttgtagaataa 12754847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 33002141 - 33002078
Alignment:
Q  3 aggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtaga 67  Q
    ||||||||||| ||| ||||||||||||||| |||||||||||||||||||||| |||| |||||    
T  33002141 aggttgtagtt-tgggaatttgggaattagggttagaagttgtaattggttgttgtaatagtaga 33002078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 8851228 - 8851283
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||  ||||||| |||||||||| |||||||||||||||||||    
T  8851228 gtaggttgtagttatgagaatttggaaattaggttttgaagttgtaattggttgtt 8851283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 10277310 - 10277255
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||  |||||| ||||||||||| |||||||||||||||||||    
T  10277310 gtaggttgtagttatgagaatttgagaattaggttttgaagttgtaattggttgtt 10277255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 11067451 - 11067396
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| || || |||||||||||||    
T  11067451 gtaggttgtagttatgggaatttgggaattaggttttgatgtagtaattggttgtt 11067396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 13132390 - 13132449
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaa 60  Q
    |||||| |||||| ||| |||||||||||||||||||||||||||||| ||||| |||||    
T  13132390 gtaggtcgtagttttgggaatttgggaattaggtttagaagttgtaatcggttgatttaa 13132449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 32433658 - 32433713
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||  |||||| ||||||||||| |||||||||||||||||||    
T  32433658 gtaggttgtagttatgtgaatttgtgaattaggttttgaagttgtaattggttgtt 32433713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 35771511 - 35771554
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttg 44  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  35771511 gtaggttgtagttttggaaatttgggaattaggtttagaagttg 35771554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 32160317 - 32160382
Alignment:
Q  175 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    ||||||||| |||| ||||||||||||||||||||||||| ||||||| ||| ||| ||||||||||    
T  32160317 ttgattgtt-aaagagtaggtaatccaatgaattaacataagaattgaagttcaggctgtagaataa 32160382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 207
Target Start/End: Complemental strand, 37539388 - 37539352
Alignment:
Q  171 caatttgattgttgaaagtgtaggtaatccaatgaat 207  Q
    |||||||||||||||||||||||||||||||||||||    
T  37539388 caatttgattgttgaaagtgtaggtaatccaatgaat 37539352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 12557904 - 12557853
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggt 52  Q
    ||||||||||||| ||| ||||||| |||||||||||||||||| |||||||    
T  12557904 gtaggttgtagttttgggaatttggaaattaggtttagaagttgaaattggt 12557853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 16550119 - 16550184
Alignment:
Q  175 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    ||||||||| |||| ||||||||| ||||||||||||||| ||||||| ||| ||| ||||||||||    
T  16550119 ttgattgtt-aaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataa 16550184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 16615543 - 16615478
Alignment:
Q  175 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    ||||||||| |||| ||||||||| ||||||||||||||| ||||||| ||| ||| ||||||||||    
T  16615543 ttgattgtt-aaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataa 16615478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 41285013 - 41284963
Alignment:
Q  2 taggttgtagttatggaaatttgggaattaggtttagaagttgtaattggt 52  Q
    |||||||||||| | | ||||||||||||||||||||||||| ||||||||    
T  41285013 taggttgtagttttaggaatttgggaattaggtttagaagttataattggt 41284963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 17070384 - 17070425
Alignment:
Q  26 gaattaggtttagaagttgtaattggttgttttaattgtaga 67  Q
    ||||||||||||||||||||||||||||| ||||| ||||||    
T  17070384 gaattaggtttagaagttgtaattggttgatttaagtgtaga 17070425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 15624002 - 15623950
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggtt 53  Q
    |||| |||||||| ||| |||||| ||||||||||||| ||||||||||||||    
T  15624002 gtagtttgtagttttgggaatttgagaattaggtttaggagttgtaattggtt 15623950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 16999413 - 16999361
Alignment:
Q  5 gttgtagttatggaaattt-gggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||| ||||| ||||||||||||| ||||||||||| |||||||    
T  16999413 gttgtagttatgggaattttgggaattaggttttgaagttgtaatcggttgtt 16999361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 19195144 - 19195096
Alignment:
Q  159 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaat 207  Q
    |||||||| || |||||||||| ||||||||||| ||||||||||||||    
T  19195144 ggttttgaatttcaatttgatttttgaaagtgtatgtaatccaatgaat 19195096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 48807395 - 48807454
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaa 60  Q
    |||| |||||||| ||| |||||||||||| |||  |||||||||||||||||| |||||    
T  48807395 gtagattgtagttttgggaatttgggaatttggtacagaagttgtaattggttgatttaa 48807454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 12754681 - 12754719
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttaga 39  Q
    |||||||||||| |||||||||||||||||| |||||||    
T  12754681 gtaggttgtagtaatggaaatttgggaattatgtttaga 12754719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 13315197 - 13315263
Alignment:
Q  175 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    |||||||||||||| |||||||| ||||||||||||   |  ||||| |||| ||||||||||||||    
T  13315197 ttgattgttgaaagagtaggtaacccaatgaattaaggaaataattggtgttcaggttgtagaataa 13315263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 241
Target Start/End: Original strand, 708630 - 708703
Alignment:
Q  168 ttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    ||||||||||||||||||||| ||||| |||   ||| |||||  ||  ||||| |||||||||||||||||||    
T  708630 ttgcaatttgattgttgaaagagtaggcaatatgatggattaaggtaataattggtgtttaggttgtagaataa 708703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 36685214 - 36685246
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattagg 33  Q
    ||||||||||||| |||||||||||||||||||    
T  36685214 gtaggttgtagttttggaaatttgggaattagg 36685246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 73; Significance: 2e-33; HSPs: 3)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 21594 - 21502
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaa 93  Q
    |||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  21594 gtagcttgtagttttggaaatttgggaattatgtttagaagttgtaattggttgttttaattgtagaattgattgtttaaattaagatgttaa 21502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 29642 - 29696
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgt 55  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  29642 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgt 29696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 21492 - 21410
Alignment:
Q  159 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    |||||||| ||||||||| ||||||||||| ||||||||||  |||||||||  ||  ||||| |||| ||||||||||||||    
T  21492 ggttttgaattgcaatttcattgttgaaagagtaggtaatctgatgaattaaggtaataattggtgttcaggttgtagaataa 21410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 8e-33; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 159 - 254
Target Start/End: Original strand, 20517156 - 20517251
Alignment:
Q  159 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggtgatgt 254  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||  ||| |||||| |||||||||||||||||||||||||||    
T  20517156 ggttttgaattgcaatttgattgttgaaagtgtaggtaatccaatgaattaatataaaaatcgatgttcaggttgtagaataacaataggtgatgt 20517251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 159 - 254
Target Start/End: Complemental strand, 22345075 - 22344980
Alignment:
Q  159 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggtgatgt 254  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||  ||| |||||| |||||||||||||||||||||||||||    
T  22345075 ggttttgaattgcaatttgattgttgaaagtgtaggtaatccaatgaattaatataaaaatcgatgttcaggttgtagaataacaataggtgatgt 22344980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 159 - 254
Target Start/End: Complemental strand, 22356735 - 22356640
Alignment:
Q  159 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggtgatgt 254  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||  ||| |||||| |||||||||||||||||||||||||||    
T  22356735 ggttttgaattgcaatttgattgttgaaagtgtaggtaatccaatgaattaatataaaaatcgatgttcaggttgtagaataacaataggtgatgt 22356640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 168 - 254
Target Start/End: Complemental strand, 20879416 - 20879330
Alignment:
Q  168 ttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggtgatgt 254  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||    
T  20879416 ttgcaaattgattgttaaaagtgtaggtaatccaatgaattaacataagaattgatgttcaggttgtagaataacaataggtaatgt 20879330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 251
Target Start/End: Original strand, 42265656 - 42265748
Alignment:
Q  159 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggtga 251  Q
    |||||||| ||||||||||||||||||| ||||| ||||||||||||||||| |||  |||||||||| |||||||||| ||| |||| ||||    
T  42265656 ggttttgaattgcaatttgattgttgaaggtgtatgtaatccaatgaattaatataaaaattgatgttcaggttgtagagtaataataagtga 42265748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 5082281 - 5082336
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  5082281 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 5082336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 19140748 - 19140693
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  19140748 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 19140693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 22532201 - 22532268
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaa 68  Q
    ||||||||||||| |||||| |||||||||||||||| |||||||||||| |||||||||| ||||||    
T  22532201 gtaggttgtagttttggaaaattgggaattaggtttaaaagttgtaattgattgttttaatagtagaa 22532268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 22536886 - 22536953
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaa 68  Q
    ||||||||||||| |||||| |||||||||||||||| |||||||||||| |||||||||| ||||||    
T  22536886 gtaggttgtagttttggaaaattgggaattaggtttaaaagttgtaattgattgttttaatagtagaa 22536953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 181 - 247
Target Start/End: Original strand, 21676713 - 21676779
Alignment:
Q  181 gttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaatag 247  Q
    |||||||| ||||||||||||||||||||| |||  |||||||||| ||||||||||||||||||||    
T  21676713 gttgaaagagtaggtaatccaatgaattaatataaaaattgatgttcaggttgtagaataacaatag 21676779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 22317981 - 22318049
Alignment:
Q  2 taggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaatt 70  Q
    ||||||||||||  || ||||||||| |||||||||||||||||||||||||| |||||| ||||||||    
T  22317981 taggttgtagtttcgggaatttgggatttaggtttagaagttgtaattggttggtttaatagtagaatt 22318049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 5761517 - 5761462
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||    
T  5761517 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattagttgtt 5761462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 6573125 - 6573180
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||    
T  6573125 gtaggttgtagttatgggaatttgggaatgaggttttgaagttgtaattggttgtt 6573180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 20083707 - 20083762
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||  |||||||||||||||||| |||||||||||||||||||    
T  20083707 gtaggttgtagttatgagaatttgggaattaggttttgaagttgtaattggttgtt 20083762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 178 - 241
Target Start/End: Complemental strand, 22483713 - 22483650
Alignment:
Q  178 attgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    ||||||||||| ||||||||||  ||||||||||||| ||||||||||| ||||||||||||||    
T  22483713 attgttgaaagagtaggtaatctgatgaattaacataagaattgatgttcaggttgtagaataa 22483650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 6101822 - 6101877
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| ||||||||||| |||||| |||||| ||||||||||||    
T  6101822 gtaggttgtagttatgggaatttgggaatcaggttttgaagttataattggttgtt 6101877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 6202759 - 6202704
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||  |||||| ||||||||||| |||||||||||||||||||    
T  6202759 gtaggttgtagttatgagaatttgagaattaggttttgaagttgtaattggttgtt 6202704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 31722563 - 31722622
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaa 60  Q
    ||||||||||||| ||| ||||||| |||| ||||||||||||||||||||||| |||||    
T  31722563 gtaggttgtagttttgggaatttggaaatttggtttagaagttgtaattggttgatttaa 31722622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 37292688 - 37292633
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||  |||||| ||||||||||| |||||||||||||||||||    
T  37292688 gtaggttgtagttatgagaatttgagaattaggttttgaagttgtaattggttgtt 37292633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 39936079 - 39936134
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||| ||||||||||| |||||||||||| ||||||    
T  39936079 gtaggttgtagttatgggaatttgcgaattaggttttgaagttgtaattagttgtt 39936134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 42817976 - 42818031
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| ||||||| |||||| ||| |||||||||||||||||||    
T  42817976 gtaggttgtagttatgggaatttggaaattagattttgaagttgtaattggttgtt 42818031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 45469289 - 45469348
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaa 60  Q
    ||||||| ||||| || |||||||||||||| |||||||||||||||||||||| |||||    
T  45469289 gtaggttatagttttgtaaatttgggaattatgtttagaagttgtaattggttgatttaa 45469348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 25657631 - 25657696
Alignment:
Q  175 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    ||||||||| |||| ||||||||| ||||||||||||||| ||||||||||| ||| ||||||||||    
T  25657631 ttgattgtt-aaagagtaggtaattcaatgaattaacataagaattgatgttcaggctgtagaataa 25657696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 20178598 - 20178654
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgt-aattggttgtt 56  Q
    ||||||||||||||||  |||||||||||||||||| |||||||| |||||||||||    
T  20178598 gtaggttgtagttatgagaatttgggaattaggttttgaagttgtaaattggttgtt 20178654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 20022122 - 20022161
Alignment:
Q  21 tttgggaattaggtttagaagttgtaattggttgttttaa 60  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  20022122 tttgggaattaggtttagaagttgtaattggttgatttaa 20022161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 210
Target Start/End: Complemental strand, 36305794 - 36305743
Alignment:
Q  159 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaa 210  Q
    |||||||| ||||||||||||| ||||||||||| ||||||| |||||||||    
T  36305794 ggttttgaattgcaatttgattcttgaaagtgtaagtaatccgatgaattaa 36305743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 16198771 - 16198706
Alignment:
Q  175 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    ||||||||| |||| ||||||||| ||||||||||||||| ||||||| ||| ||| ||||||||||    
T  16198771 ttgattgtt-aaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataa 16198706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 39694346 - 39694400
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgt 55  Q
    ||||||||||||| ||| ||||||||||||||| ||||| ||||||||| |||||    
T  39694346 gtaggttgtagttttgggaatttgggaattagggttagacgttgtaattagttgt 39694400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 176 - 241
Target Start/End: Complemental strand, 23479016 - 23478952
Alignment:
Q  176 tgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    |||||||| |||| ||||||||| ||||||||||||||| ||||||| ||| ||| ||||||||||    
T  23479016 tgattgtt-aaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataa 23478952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 42265578 - 42265631
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttg 54  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||| || ||||||    
T  42265578 gtaggttgtagttttgggaatttgggaattagggttagaagttgcaaatggttg 42265631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 210
Target Start/End: Original strand, 22708425 - 22708476
Alignment:
Q  159 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaa 210  Q
    |||||| | ||||||||||||| ||||||||||| ||||| |||||||||||    
T  22708425 ggttttaaattgcaatttgattcttgaaagtgtaagtaatacaatgaattaa 22708476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 19880758 - 19880693
Alignment:
Q  175 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    ||||||||| |||| |||||||||  |||||||||||||| ||||||| ||| ||| ||||||||||    
T  19880758 ttgattgtt-aaagagtaggtaattaaatgaattaacataagaattgaagttcaggctgtagaataa 19880693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 22610382 - 22610448
Alignment:
Q  175 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    |||||||||||||| |||||||||||| ||||||||| || | | ||| ||| || |||||||||||    
T  22610382 ttgattgttgaaagagtaggtaatccattgaattaacgtaaggaatgaggttcagattgtagaataa 22610448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 26454641 - 26454576
Alignment:
Q  175 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    ||||||||| |||| ||||||||| ||||||||||||||| ||||| | ||| ||| ||||||||||    
T  26454641 ttgattgtt-aaagagtaggtaattcaatgaattaacataagaattaaagttcaggctgtagaataa 26454576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 210
Target Start/End: Original strand, 21678947 - 21678995
Alignment:
Q  162 tttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaa 210  Q
    ||||| |||||||| ||| |||||||| ||||||||| |||||||||||    
T  21678947 tttgaattgcaattggatggttgaaagagtaggtaattcaatgaattaa 21678995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 70; Significance: 1e-31; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 161 - 254
Target Start/End: Complemental strand, 18585629 - 18585536
Alignment:
Q  161 ttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggtgatgt 254  Q
    |||||| ||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||    
T  18585629 ttttgaattgcaatttgattgttgaaagtgtatgtaattcaatgaattaacataagaattgatgttcaggttgtagaataacaatatgtgatgt 18585536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 18585788 - 18585715
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgatt 74  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18585788 gtaggttgtagttttggaaatttaggaattaggtttagaagttgtaattggttgttttaattgtagaattgatt 18585715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 168 - 254
Target Start/End: Complemental strand, 18982355 - 18982269
Alignment:
Q  168 ttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggtgatgt 254  Q
    ||||||||||||||||||||| ||||||||||||||||| ||| |||  ||| |||||| |||||||||||||||||| ||||||||    
T  18982355 ttgcaatttgattgttgaaagcgtaggtaatccaatgaactaatataaaaatcgatgttcaggttgtagaataacaatcggtgatgt 18982269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 172 - 254
Target Start/End: Complemental strand, 18459245 - 18459163
Alignment:
Q  172 aatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggtgatgt 254  Q
    ||||||||||||||||||||||| |||||||||||||||||||  || || |||| |||||||||||||||| ||||| ||||    
T  18459245 aatttgattgttgaaagtgtaggaaatccaatgaattaacataaaaactgttgttcaggttgtagaataacagtaggtaatgt 18459163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 7827955 - 7827900
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  7827955 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 7827900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 23150356 - 23150411
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  23150356 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 23150411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 27330050 - 27330105
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  27330050 gtaggttgtagttatggcaatttgggaattaggttttgaagttgtaattggttgtt 27330105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 27390790 - 27390845
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  27390790 gtaggttgtagttatggcaatttgggaattaggttttgaagttgtaattggttgtt 27390845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 28948541 - 28948490
Alignment:
Q  17 gaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaa 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  28948541 gaaatttgggaattaggtttagaagttgtaattggttgttttaatagtagaa 28948490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 242
Target Start/End: Original strand, 3006974 - 3007057
Alignment:
Q  159 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataac 242  Q
    |||||||| ||||||||||||| ||||||||||| |||||||||||||||||  |   | ||||||||||||||||||| ||||    
T  3006974 ggttttgaattgcaatttgattcttgaaagtgtaagtaatccaatgaattaatgtgaaagttgatgtttaggttgtagagtaac 3007057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 19655300 - 19655355
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||    
T  19655300 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattagttgtt 19655355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 23501655 - 23501595
Alignment:
Q  1 gtaggttgtagttat-ggaaatttgggaattaggtttagaagttgtaattggttgttttaa 60  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||| |||| |||||    
T  23501655 gtaggttgtagtttttggaaatttgggaattaggtttagaagttgtaatttgttgatttaa 23501595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 35057496 - 35057448
Alignment:
Q  159 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaat 207  Q
    |||||||| || |||||||||||||||||||||||||||||||||||||    
T  35057496 ggttttgaatttcaatttgattgttgaaagtgtaggtaatccaatgaat 35057448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 15890781 - 15890836
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||| ||  |||||||||||||||||| |||||||||||||||||||    
T  15890781 gtaggttgtagttttgttaatttgggaattaggttttgaagttgtaattggttgtt 15890836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 27125546 - 27125601
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| ||||||||| |||||||| |||||||||||| ||||||    
T  27125546 gtaggttgtagttatgggaatttgggacttaggttttgaagttgtaattagttgtt 27125601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 19401077 - 19401012
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtag 66  Q
    ||||||||||||| ||| |||||| |||||||||||| |||||||||||| ||| |||||| ||||    
T  19401077 gtaggttgtagttttgggaatttgagaattaggtttataagttgtaattgtttgatttaatagtag 19401012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 18703551 - 18703503
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaatt 49  Q
    ||||||||||||||||| |||||||||||||| ||| ||||||||||||    
T  18703551 gtaggttgtagttatgggaatttgggaattagattttgaagttgtaatt 18703503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 18709486 - 18709438
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaatt 49  Q
    ||||||||||||||||| |||||||||||||| ||| ||||||||||||    
T  18709486 gtaggttgtagttatgggaatttgggaattagattttgaagttgtaatt 18709438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 248
Target Start/End: Original strand, 24506228 - 24506304
Alignment:
Q  172 aatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaatagg 248  Q
    ||||| ||||||||||||||||||||||||||||||||  |||  ||||||||||   ||| |||||||| ||||||    
T  24506228 aatttaattgttgaaagtgtaggtaatccaatgaattagtataaaaattgatgttcttgttttagaataataatagg 24506304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 203
Target Start/End: Complemental strand, 13285699 - 13285656
Alignment:
Q  160 gttttgatttgcaatttgattgttgaaagtgtaggtaatccaat 203  Q
    ||||||| || |||||||||||||||||||||||||||||||||    
T  13285699 gttttgaatttcaatttgattgttgaaagtgtaggtaatccaat 13285656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 29045200 - 29045134
Alignment:
Q  175 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    |||||||||||||| ||||||||||| ||||| |||  ||  |||||||||| ||||||||||||||    
T  29045200 ttgattgttgaaagagtaggtaatccgatgaactaaggtaataattgatgttcaggttgtagaataa 29045134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 18928663 - 18928614
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattg 50  Q
    |||||||| |||| ||| ||||||| ||||||||||||||||||||||||    
T  18928663 gtaggttgaagttttgggaatttggaaattaggtttagaagttgtaattg 18928614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 242
Target Start/End: Complemental strand, 31166164 - 31166088
Alignment:
Q  166 atttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataac 242  Q
    ||||||||||||||| || ||||||||  ||||||||||||||||  |   | ||||||||||||||||||| ||||    
T  31166164 atttgcaatttgattctttaaagtgtaactaatccaatgaattaatgtgaaagttgatgtttaggttgtagagtaac 31166088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 15891686 - 15891751
Alignment:
Q  175 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    ||||||||| |||| ||||||||| ||||||||||||||| ||||||| ||| ||| |||| |||||    
T  15891686 ttgattgtt-aaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtaaaataa 15891751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 15900771 - 15900836
Alignment:
Q  175 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    ||||||||| |||| ||||||||| ||||||||||||||| ||||||| ||| ||| |||| |||||    
T  15900771 ttgattgtt-aaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtaaaataa 15900836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 5e-31; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 14549743 - 14549651
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaa 93  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||  ||||| ||||||||    
T  14549743 gtaggttgtagttttggaaatttgggaattaggtttagaagttgtaattaggtgttttaattgtagaattgattgttaaaattaggatgttaa 14549651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 172 - 246
Target Start/End: Complemental strand, 14477571 - 14477497
Alignment:
Q  172 aatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaata 246  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||||| || ||||||||||||||||    
T  14477571 aatttgattgttgaaagtgtaggtaatccaatgaattaacatagaaattgatgttcagattgtagaataacaata 14477497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 171 - 254
Target Start/End: Complemental strand, 18462963 - 18462880
Alignment:
Q  171 caatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggtgatgt 254  Q
    |||||||||||||||||||||||||||||||||||||||||||   |||||||||| || |||||||| |||||||||| ||||    
T  18462963 caatttgattgttgaaagtgtaggtaatccaatgaattaacatgaaaattgatgttcagattgtagaacaacaataggtaatgt 18462880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 172 - 254
Target Start/End: Complemental strand, 13165072 - 13164990
Alignment:
Q  172 aatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggtgatgt 254  Q
    ||||||||||||||||||||||| ||||||||||||||||||   |||||||||  |||||||||||||||||||||| ||||    
T  13165072 aatttgattgttgaaagtgtaggaaatccaatgaattaacatgaaaattgatgtccaggttgtagaataacaataggtaatgt 13164990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 16998508 - 16998453
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  16998508 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 16998453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 25091636 - 25091581
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  25091636 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 25091581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 53630543 - 53630598
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  53630543 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 53630598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 10356505 - 10356556
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggt 52  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  10356505 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggt 10356556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 11425926 - 11425871
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||    
T  11425926 gtaggttgtagttatgggaatttgggaattaggttttgaaattgtaattggttgtt 11425871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 37019653 - 37019598
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||    
T  37019653 gtaggttgtagttatgggaatttgagaattaggttttgaagttgtaattggttgtt 37019598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 6633606 - 6633661
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||  |||||| ||||||||||| |||||||||||||||||||    
T  6633606 gtaggttgtagttatgagaatttgagaattaggttttgaagttgtaattggttgtt 6633661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 15115205 - 15115150
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||  ||| |||||||||||||||||||    
T  15115205 gtaggttgtagttatgggaatttgggaattattttttgaagttgtaattggttgtt 15115150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 42875780 - 42875725
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||| ||||||| ||||||||||||| |||||    
T  42875780 gtaggttgtagttatgggaatttgggaaataggttttgaagttgtaattgattgtt 42875725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 46001600 - 46001655
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||  |||||| ||||||||||| |||||||||||||||||||    
T  46001600 gtaggttgtagttatgagaatttgagaattaggttttgaagttgtaattggttgtt 46001655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 10694362 - 10694427
Alignment:
Q  175 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    ||||||||| |||| ||||||||||||||||||||||||| ||||||| ||| ||| ||||||||||    
T  10694362 ttgattgtt-aaagagtaggtaatccaatgaattaacataagaattgaagttcaggctgtagaataa 10694427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 237
Target Start/End: Original strand, 14353899 - 14353977
Alignment:
Q  159 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtaga 237  Q
    |||||||| ||||||||||||| ||||||||||| ||||||| |||||||||  |   | |||||||||||||||||||    
T  14353899 ggttttgaattgcaatttgattcttgaaagtgtaagtaatccgatgaattaatgtgaaagttgatgtttaggttgtaga 14353977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 19434628 - 19434710
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaa 93  Q
    ||||||||||||| | ||||||||||||||| |||||||||||||          ||||| ||||||||||||||||| ||||||||||||||    
T  19434628 gtaggttgtagtttttgaaatttgggaattaagtttagaagttgt----------tttaaatgtagaattgattgttgaaattaagatgttaa 19434710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 241
Target Start/End: Complemental strand, 14549600 - 14549520
Alignment:
Q  161 ttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    |||||| ||||||||||||||||||||| ||| ||||||  |||||||||  ||  ||||| |||| ||||||||||||||    
T  14549600 ttttgaattgcaatttgattgttgaaagagtatgtaatctgatgaattaaggtaataattggtgttcaggttgtagaataa 14549520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 241
Target Start/End: Original strand, 19434761 - 19434841
Alignment:
Q  161 ttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    |||||| ||||||||||||||||||||| ||||||||||  |||||||||   |  ||||| |||| ||||||||||||||    
T  19434761 ttttgaattgcaatttgattgttgaaagagtaggtaatctgatgaattaaagaaataattggtgttcaggttgtagaataa 19434841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 60
Target Start/End: Complemental strand, 9638972 - 9638933
Alignment:
Q  21 tttgggaattaggtttagaagttgtaattggttgttttaa 60  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  9638972 tttgggaattaggtttagaagttgtaattggttgatttaa 9638933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 9924136 - 9924085
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggt 52  Q
    |||||||| |||| ||| ||||||| ||||||||||||||||||||||||||    
T  9924136 gtaggttgaagttttgggaatttggaaattaggtttagaagttgtaattggt 9924085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 19610307 - 19610252
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||| |||||| |||| || ||||||||||||||||    
T  19610307 gtaggttgtagttatgggaatttgagaattaagttttgacgttgtaattggttgtt 19610252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 9870514 - 9870568
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaa-ttaggtttagaagttgtaattggttg 54  Q
    ||||||||||||| ||| |||||||||| ||||| ||||||||||||||||||||    
T  9870514 gtaggttgtagttttgggaatttgggaaattagggttagaagttgtaattggttg 9870568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 216 - 254
Target Start/End: Original strand, 13043925 - 13043963
Alignment:
Q  216 gaattgatgtttaggttgtagaataacaataggtgatgt 254  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  13043925 gaattgatgttcaggttgtagaataacaataggtgatgt 13043963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 237
Target Start/End: Original strand, 45314240 - 45314315
Alignment:
Q  162 tttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtaga 237  Q
    ||||| ||||||||||||| ||||||||||| ||||| | |||||||||  |   | |||||||||||||||||||    
T  45314240 tttgaattgcaatttgattcttgaaagtgtaagtaattcgatgaattaatgtgaaagttgatgtttaggttgtaga 45314315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 9622423 - 9622357
Alignment:
Q  175 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    |||||||||||||| |||||||||||| ||||||||| || | | ||| ||| || |||||||||||    
T  9622423 ttgattgttgaaagagtaggtaatccattgaattaacgtaaggaatgaggttcagattgtagaataa 9622357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 16296807 - 16296741
Alignment:
Q  175 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    |||||||||||||| ||||||||||| |||||||||  ||  ||||| |||| ||||||| ||||||    
T  16296807 ttgattgttgaaagagtaggtaatccgatgaattaaggtaataattggtgttcaggttgttgaataa 16296741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 26921707 - 26921745
Alignment:
Q  18 aaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||||| ||||| |||||||||||||    
T  26921707 aaatttgggaattaggttttgaagtcgtaattggttgtt 26921745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 22 - 93
Target Start/End: Complemental strand, 199 - 128
Alignment:
Q  22 ttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaa 93  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  199 ttggaaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaa 128  T

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Target: chr3 (Bit Score: 64; Significance: 5e-28; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 175 - 254
Target Start/End: Complemental strand, 48631268 - 48631189
Alignment:
Q  175 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggtgatgt 254  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||    
T  48631268 ttgattgttgaaagtgtaggtaattcaatgaattaacataagaattgatgttcaggttgtagaataacaataggtaatgt 48631189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 247
Target Start/End: Original strand, 3160735 - 3160814
Alignment:
Q  168 ttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaatag 247  Q
    ||||||||||||||||||||| ||||||||| ||||||||||| |||  |||||||||||||||||||||||||||||||    
T  3160735 ttgcaatttgattgttgaaagagtaggtaattcaatgaattaatataaaaattgatgtttaggttgtagaataacaatag 3160814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 159 - 254
Target Start/End: Original strand, 13522449 - 13522543
Alignment:
Q  159 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggtgatgt 254  Q
    |||||||| || ||| ||||| ||| |||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  13522449 ggttttgaatttcaaattgatcgtt-aaagagtaggtaatccaatgaattaacataagaattgatgttcaggttgtagaataacaataggtgatgt 13522543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 175 - 254
Target Start/End: Original strand, 12155143 - 12155222
Alignment:
Q  175 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggtgatgt 254  Q
    ||||||||||||||||||||||| |||||||||||||||   |||||||||| ||||||||||||||| |||||| ||||    
T  12155143 ttgattgttgaaagtgtaggtaacccaatgaattaacatgaaaattgatgttgaggttgtagaataactataggtaatgt 12155222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 166 - 254
Target Start/End: Original strand, 12151054 - 12151142
Alignment:
Q  166 atttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggtgatgt 254  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||   |||||||| ||| ||| |||||||||||||||| ||||    
T  12151054 attttcaaattgattgttgaaagtgtaggtaacccaatgaattaacatgaaaattgatgcttatgttttagaataacaataggttatgt 12151142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 9510985 - 9511052
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaa 68  Q
    |||| |||||||| ||| |||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  9510985 gtagattgtagttttgggaatttgagaattaggtttagaagttgtaattggttgttttaatagtagaa 9511052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 9518960 - 9519027
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaa 68  Q
    |||| |||||||| ||| |||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  9518960 gtagattgtagttttgggaatttgagaattaggtttagaagttgtaattggttgttttaatagtagaa 9519027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 10563691 - 10563636
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  10563691 gtagtttgtagttatggaaatttgggaattaggttttgaagttgtaattggttgtt 10563636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 17044949 - 17044894
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  17044949 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 17044894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 17518942 - 17518997
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  17518942 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 17518997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 17533804 - 17533859
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  17533804 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 17533859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 40807979 - 40807924
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  40807979 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 40807924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 49900713 - 49900658
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  49900713 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 49900658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 50348095 - 50348150
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  50348095 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 50348150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 45803453 - 45803519
Alignment:
Q  175 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    |||||||||||||| ||||||||||| ||||||||||||| ||||||||||  ||||||||||||||    
T  45803453 ttgattgttgaaagagtaggtaatccgatgaattaacataagaattgatgtccaggttgtagaataa 45803519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 35064610 - 35064658
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaatt 49  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  35064610 gtaggttgtagttatggaaatttgggaattaggttttgaagttgtaatt 35064658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 22306652 - 22306707
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||    
T  22306652 gtaggttgtagttatgggaatttgtgaattaggttttgaagttgtaattggttgtt 22306707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 40812816 - 40812761
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||    
T  40812816 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattgattgtt 40812761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 41172440 - 41172495
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||    
T  41172440 gtaggttgtagttatgggaattagggaattaggttttgaagttgtaattggttgtt 41172495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 6805027 - 6805109
Alignment:
Q  159 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    |||||||| ||||||||||||||||||||| ||||||||||  |||||||||  ||  ||||| |||| ||||||||||||||    
T  6805027 ggttttgaattgcaatttgattgttgaaagagtaggtaatctgatgaattaaggtaataattggtgttcaggttgtagaataa 6805109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 19568277 - 19568343
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtaga 67  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||||||||| ||| |||| |||||    
T  19568277 gtaggttgtagttttgggaatttgggaattagggttagaagttgtaattggtagttgtaatagtaga 19568343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 11563707 - 11563654
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttg 54  Q
    ||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||    
T  11563707 gtaggttgtagttttgggaatttgggaattaggtttaaaagttgtaattggttg 11563654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 10311510 - 10311455
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||  |||||| ||||||||||| |||||||||||||||||||    
T  10311510 gtaggttgtagttatgagaatttgagaattaggttttgaagttgtaattggttgtt 10311455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 13185877 - 13185834
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttg 44  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  13185877 gtaggttgtagttttggaaatttgggaattaggtttagaagttg 13185834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 17539089 - 17539034
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| ||||||| |||||||||| |||| ||||||||||||||    
T  17539089 gtaggttgtagttatgggaatttggaaattaggttttgaagatgtaattggttgtt 17539034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 35960998 - 35961049
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggt 52  Q
    |||||||| |||| ||||||||||| ||||||||||||||||||||||||||    
T  35960998 gtaggttgaagttttggaaatttggaaattaggtttagaagttgtaattggt 35961049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 44274401 - 44274346
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||  ||| |||||||||||||||||||    
T  44274401 gtaggttgtagttatgggaatttgggaattatattttgaagttgtaattggttgtt 44274346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 17694050 - 17694001
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattg 50  Q
    |||||||||||||||||||||||| ||||||| ||| |||||||||||||    
T  17694050 gtaggttgtagttatggaaatttgtgaattagattttgaagttgtaattg 17694001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 42324041 - 42324094
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttg 54  Q
    ||||||||||||| ||| ||||||| ||||||| ||||||||||||||||||||    
T  42324041 gtaggttgtagttttgggaatttggaaattagggttagaagttgtaattggttg 42324094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 49968928 - 49968993
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtag 66  Q
    |||| |||||||| ||  ||||||||||||||||||| |||||||||||||||| |||||| ||||    
T  49968928 gtagcttgtagttttgagaatttgggaattaggtttataagttgtaattggttgatttaatagtag 49968993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 35354582 - 35354530
Alignment:
Q  4 ggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    |||||||||||||| ||||||| |||||||||| ||||||||||||| |||||    
T  35354582 ggttgtagttatgggaatttggaaattaggttttgaagttgtaattgattgtt 35354530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 210
Target Start/End: Complemental strand, 6003136 - 6003085
Alignment:
Q  159 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaa 210  Q
    |||||||| || |||||||||| ||||||||||| |||||||||||||||||    
T  6003136 ggttttgaattacaatttgattcttgaaagtgtaagtaatccaatgaattaa 6003085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 11259414 - 11259359
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    |||| |||||||||||  |||||||||||||||||| ||||||||||||| |||||    
T  11259414 gtagattgtagttatgagaatttgggaattaggttttgaagttgtaattgattgtt 11259359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 14508830 - 14508775
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattagg-tttagaagttgtaattggttgt 55  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||||||||||||    
T  14508830 gtaggttgtagttatgggaattttggaattaggttttggaagttgtaattggttgt 14508775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 17047109 - 17047054
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    |||||||||||||||   ||||||||||||| |||| |||||||||||||||||||    
T  17047109 gtaggttgtagttatttgaatttgggaattaagttttgaagttgtaattggttgtt 17047054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 33565069 - 33565018
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggt 52  Q
    |||||||| |||| ||| ||||||| ||||||||||||||||||||||||||    
T  33565069 gtaggttgaagttttgggaatttggaaattaggtttagaagttgtaattggt 33565018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 16979847 - 16979782
Alignment:
Q  175 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    ||||||||| |||| ||||||||| ||||||||||||||| ||||||| ||| ||| ||||||||||    
T  16979847 ttgattgtt-aaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataa 16979782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 211
Target Start/End: Original strand, 24177869 - 24177921
Alignment:
Q  159 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaac 211  Q
    |||||||| ||||||||||||||||||||| ||||| || ||| |||||||||    
T  24177869 ggttttgaattgcaatttgattgttgaaagagtaggcaaaccattgaattaac 24177921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 14641638 - 14641677
Alignment:
Q  21 tttgggaattaggtttagaagttgtaattggttgttttaa 60  Q
    ||||||||||||||||||||||||||||| |||| |||||    
T  14641638 tttgggaattaggtttagaagttgtaatttgttgatttaa 14641677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 15931577 - 15931624
Alignment:
Q  2 taggttgtagttatggaaatttgggaattaggtttagaagttgtaatt 49  Q
    |||||||||||||||  ||||| |||||||||||| ||||||||||||    
T  15931577 taggttgtagttatgagaattttggaattaggtttcgaagttgtaatt 15931624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 22652708 - 22652643
Alignment:
Q  175 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    ||||||||| |||| |||||||||| | |||||||||||| ||||||| ||| ||| ||||||||||    
T  22652708 ttgattgtt-aaagagtaggtaatctagtgaattaacataagaattgaagttcaggctgtagaataa 22652643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 24177805 - 24177847
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagtt 43  Q
    ||||||||||||| ||||||||||||||||| ||||| |||||    
T  24177805 gtaggttgtagttttggaaatttgggaattatgtttaaaagtt 24177847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 37039032 - 37038978
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaa-ttaggtttagaagttgtaattggttg 54  Q
    ||||||||||||| ||| |||||||||| ||||| ||| ||||||||||||||||    
T  37039032 gtaggttgtagttttgggaatttgggaaattagggttaaaagttgtaattggttg 37038978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 22146832 - 22146880
Alignment:
Q  7 tgtagttatggaaatttgggaa-ttaggtttagaagttgtaattggttg 54  Q
    ||||||| ||| |||||||||| ||||| ||||||||||||||||||||    
T  22146832 tgtagttttgggaatttgggaaattagggttagaagttgtaattggttg 22146880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 63; Significance: 2e-27; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 168 - 254
Target Start/End: Original strand, 18969 - 19055
Alignment:
Q  168 ttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggtgatgt 254  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||  ||| |||||| |||||||||||||||||||||||||||    
T  18969 ttgcaatttgattgttgaaagtgtaggtaatccaatgaactaatataaaaatcgatgttcaggttgtagaataacaataggtgatgt 19055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 161 - 246
Target Start/End: Original strand, 158971 - 159056
Alignment:
Q  161 ttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaata 246  Q
    |||||| ||| ||||||||||||||| |||||||| |||||||||||||| |||  |||||||||| |||||||||| ||| ||||    
T  158971 ttttgaattgaaatttgattgttgaaggtgtaggtgatccaatgaattaatataaaaattgatgttcaggttgtagagtaataata 159056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 158891 - 158944
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttg 54  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||| || ||||||    
T  158891 gtaggttgtagttttgggaatttgggaattagggttagaagttgcaaatggttg 158944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 201
Target Start/End: Original strand, 16676 - 16718
Alignment:
Q  159 ggttttgatttgcaatttgattgttgaaagtgtaggtaatcca 201  Q
    |||||| | |||||||||||||||| |||||||||||||||||    
T  16676 ggttttaaattgcaatttgattgttcaaagtgtaggtaatcca 16718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 166 - 247
Target Start/End: Complemental strand, 17052 - 16971
Alignment:
Q  166 atttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaatag 247  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||  |||||||||| ||||||||||||||||||||    
T  17052 atttgcaatttgattgttgaaagagtaggtaatccaatgaattaatataaaaattgatgttcaggttgtagaataacaatag 16971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 166 - 247
Target Start/End: Complemental strand, 26583 - 26502
Alignment:
Q  166 atttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaatag 247  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||  |||||||||| ||||||||||||||||||||    
T  26583 atttgcaatttgattgttgaaagagtaggtaatccaatgaattaatataaaaattgatgttcaggttgtagaataacaatag 26502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 171 - 254
Target Start/End: Original strand, 38554 - 38637
Alignment:
Q  171 caatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggtgatgt 254  Q
    |||||||||||||||||||||||||||||||||||||||||||   |||||||||| ||||||| |||||||||||||| ||||    
T  38554 caatttgattgttgaaagtgtaggtaatccaatgaattaacatgaaaattgatgttcaggttgtggaataacaataggtaatgt 38637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 247
Target Start/End: Original strand, 59764 - 59843
Alignment:
Q  168 ttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaatag 247  Q
    ||||||||||||||||||||  ||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||    
T  59764 ttgcaatttgattgttgaaatagtaggtaatccaatgaattaatataaaaattgatgtttaggttgtagaataacaatag 59843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 172 - 246
Target Start/End: Complemental strand, 28653 - 28579
Alignment:
Q  172 aatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaata 246  Q
    |||||||||||||||||||||||||||| ||||||||||||||  |||||||||| |||||||||||||| ||||    
T  28653 aatttgattgttgaaagtgtaggtaatctaatgaattaacataaaaattgatgttcaggttgtagaataataata 28579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 251
Target Start/End: Original strand, 28476 - 28568
Alignment:
Q  159 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggtga 251  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||  |||||||| | |||||||||| ||| |||| ||||    
T  28476 ggttttgaattgcaatttgattgttgaaggtgtaggtaatccaatgaattaatataaaaattgatggtcaggttgtagagtaataataagtga 28568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 28398 - 28451
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttg 54  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||| || ||||||    
T  28398 gtaggttgtagttttgggaatttggaaattagggttagaagttgcaaatggttg 28451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 251
Target Start/End: Original strand, 35611 - 35703
Alignment:
Q  159 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggtga 251  Q
    |||||||| ||||||||||||||||||| |||||| |||||||||||||||| |||  |||||||||| |||||||||| ||| |||| ||||    
T  35611 ggttttgaattgcaatttgattgttgaaggtgtagataatccaatgaattaatataaaaattgatgttgaggttgtagagtaataataagtga 35703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 35533 - 35586
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttg 54  Q
    ||||||||||||| ||| ||||||||||||| | |||||||||| || ||||||    
T  35533 gtaggttgtagttttgggaatttgggaattaaggttagaagttgcaaatggttg 35586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1800 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold1800
Description:

Target: scaffold1800; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 162 - 254
Target Start/End: Complemental strand, 557 - 463
Alignment:
Q  162 tttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacata--tgaattgatgtttaggttgtagaataacaataggtgatgt 254  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||| |||    ||||||||||  ||||||||||||||||||||| ||||    
T  557 tttgaattgcaatttgattgttgaaagtgtaggtaattcaatgaattaatataatacaattgatgttcgggttgtagaataacaataggtaatgt 463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 52; Significance: 7e-21; HSPs: 3)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 159 - 254
Target Start/End: Complemental strand, 12192 - 12098
Alignment:
Q  159 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggtgatgt 254  Q
    |||||||| || ||| ||||||||| |||| |||||||| |||||||||||||||| ||||||||||| ||||||||||||||  |||||||||||    
T  12192 ggttttgaatttcaaattgattgtt-aaagagtaggtaacccaatgaattaacataagaattgatgttcaggttgtagaataatcataggtgatgt 12098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 12377 - 12323
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgt 55  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||    
T  12377 gtaggttgtagttttggaaatttgagaattaggtttagaagttgtaataggttgt 12323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 12253 - 12221
Alignment:
Q  61 ttgtagaattgattgttggaattaagatgttaa 93  Q
    |||||||||||||||||||||||||||||||||    
T  12253 ttgtagaattgattgttggaattaagatgttaa 12221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0848 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 2090 - 2155
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtag 66  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||| ||||    
T  2090 gtaggttgtagttttggaaatttgggaattaggtttataagttgtaattggttggtttaatagtag 2155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1941 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 121 - 66
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  121 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 66  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 537 - 592
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  537 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 2547 - 2492
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  2547 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 2492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 3165 - 3110
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  3165 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 3110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 1147 - 1093
Alignment:
Q  2 taggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  1147 taggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 1093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 8897 - 8979
Alignment:
Q  159 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    |||||||| || ||||||||||||||| || ||||||| || ||||||||||| || ||||||||||| ||||||||||||||    
T  8897 ggttttgaatttcaatttgattgttgagagagtaggtagtcgaatgaattaacgtaagaattgatgttcaggttgtagaataa 8979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 172 - 254
Target Start/End: Original strand, 7626 - 7708
Alignment:
Q  172 aatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggtgatgt 254  Q
    ||||||||||||| || |||||| |||||||||||||||| |   |||||||||| |||||||||||||||||||||| ||||    
T  7626 aatttgattgttggaaatgtaggaaatccaatgaattaacgtgaaaattgatgttcaggttgtagaataacaataggtaatgt 7708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 12603 - 12657
Alignment:
Q  2 taggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  12603 taggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 12657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 5366 - 5311
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||    
T  5366 gtaggttgtagttatgggaatttgggaattaggttttgaagtcgtaattggttgtt 5311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 47; Significance: 7e-18; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 22074 - 21992
Alignment:
Q  159 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    |||||||| ||||||||||||||||||||| ||||||||||  |||||||||  || |||||| |||| ||||||||||||||    
T  22074 ggttttgaattgcaatttgattgttgaaagagtaggtaatctgatgaattaaggtaagaattggtgttcaggttgtagaataa 21992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 146706 - 146651
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||    
T  146706 gtaggttgtagttatgggaatttgggaattaggttttgaagttataattggttgtt 146651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 210
Target Start/End: Complemental strand, 9977 - 9926
Alignment:
Q  159 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaa 210  Q
    |||||||| ||||||||||||||||||||| ||||||||||  |||||||||    
T  9977 ggttttgaattgcaatttgattgttgaaagagtaggtaatctgatgaattaa 9926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 47; Significance: 7e-18; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 328364 - 328414
Alignment:
Q  6 ttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  328364 ttgtagttatggaaatttgggaattaggtttcgaagttgtaattggttgtt 328414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 72909 - 72872
Alignment:
Q  19 aatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    |||||| ||||||||||| |||||||||||||||||||    
T  72909 aatttgtgaattaggttttgaagttgtaattggttgtt 72872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 47; Significance: 7e-18; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 31976 - 31922
Alignment:
Q  2 taggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  31976 taggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 31922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 37283 - 37229
Alignment:
Q  2 taggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  37283 taggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 37229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 77670 - 77615
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||| ||||||||||| ||||||||||| |||||||    
T  77670 gtaggttgtagttatgggaatttgagaattaggttttgaagttgtaataggttgtt 77615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 45; Significance: 1e-16; HSPs: 3)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 113037 - 113093
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttt 57  Q
    |||||||||| || ||| |||||||||||||||||||||||||||||||||||||||    
T  113037 gtaggttgtaattttgggaatttgggaattaggtttagaagttgtaattggttgttt 113093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 81550 - 81501
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattg 50  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  81550 gtaggttgtagttttgggaatttgggaattaggtttagaagttgtaattg 81501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 117890 - 117926
Alignment:
Q  21 tttgggaattaggtttagaagttgtaattggttgttt 57  Q
    |||||||||||||||||||||||||||||||||||||    
T  117890 tttgggaattaggtttagaagttgtaattggttgttt 117926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1766 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold1766
Description:

Target: scaffold1766; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 765 - 820
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||    
T  765 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattagttgtt 820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 1188 - 1133
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||| | |||||||||||||||||| |||||||||||||||||||    
T  1188 gtaggttgtagttattgtaatttgggaattaggttttgaagttgtaattggttgtt 1133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 4783 - 4838
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    |||||| |||||||||| |||||||||||||||||| |||||||||||||||||||    
T  4783 gtaggtcgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 4838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 11343 - 11398
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||    
T  11343 gtaggttgtagttatgggaatttgggaattaagttttgaagttgtaattggttgtt 11398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 21862 - 21917
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    |||||||||| |||||| |||||||||||||||||| |||||||||||||||||||    
T  21862 gtaggttgtatttatgggaatttgggaattaggttttgaagttgtaattggttgtt 21917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 34322 - 34267
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||    
T  34322 gtaggttgtagttatgggaatttgggaatcaggttttgaagttgtaattggttgtt 34267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 58729 - 58674
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||    
T  58729 gtaggttgtagttatgggaatttgagaattaggttttgaagttgtaattggttgtt 58674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 171 - 254
Target Start/End: Complemental strand, 23553 - 23470
Alignment:
Q  171 caatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggtgatgt 254  Q
    |||||| |||||| ||||||||||||||| |||||||||||||   ||||||| || |||||||||||||| ||||||| ||||    
T  23553 caattttattgttaaaagtgtaggtaatcaaatgaattaacatgaaaattgattttcaggttgtagaataataataggtaatgt 23470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 159 - 242
Target Start/End: Complemental strand, 26643 - 26560
Alignment:
Q  159 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataac 242  Q
    |||||||| ||||||||||||| ||||||||||| ||||||  |||||||||  |   | ||||||||||||||||||| ||||    
T  26643 ggttttgaattgcaatttgattcttgaaagtgtaagtaatctgatgaattaatgtgaaagttgatgtttaggttgtagagtaac 26560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1939 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1939
Description:

Target: scaffold1939; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 175 - 237
Target Start/End: Complemental strand, 63 - 1
Alignment:
Q  175 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtaga 237  Q
    |||||||||||||| ||||||||||||| ||||||||||| ||||||||||| | ||||||||    
T  63 ttgattgttgaaagagtaggtaatccaaagaattaacataagaattgatgttcatgttgtaga 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 179 - 241
Target Start/End: Complemental strand, 35424 - 35362
Alignment:
Q  179 ttgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    ||||| |||||||| |||||||||| |||||||||| ||||||||||| ||||||||||||||    
T  35424 ttgttaaaagtgtatgtaatccaataaattaacataagaattgatgttcaggttgtagaataa 35362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 35467 - 35420
Alignment:
Q  9 tagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||| ||| |||||||||||||||||| ||||| |||||||||||||    
T  35467 tagttttgggaatttgggaattaggttttgaagtcgtaattggttgtt 35420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 248
Target Start/End: Complemental strand, 3148 - 3068
Alignment:
Q  168 ttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaatagg 248  Q
    ||||||||| ||||||||||||||||||||| ||||||||||  |||  ||||||||||  |||| |||||||| ||||||    
T  3148 ttgcaatttaattgttgaaagtgtaggtaattcaatgaattagtataaaaattgatgttctggttttagaataataatagg 3068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 159 - 235
Target Start/End: Complemental strand, 13345 - 13269
Alignment:
Q  159 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgta 235  Q
    |||||||| |||||||||||||||||||  ||||||||| |||||||||| | |||  |||||||||| ||||||||    
T  13345 ggttttgaattgcaatttgattgttgaagatgtaggtaacccaatgaattgatataaaaattgatgttcaggttgta 13269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 8625 - 8557
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaa-ttaggtttagaagttgtaattggttgttttaattgtagaa 68  Q
    ||||||||||||| ||| |||||||||| ||||| |||||||||||||||||||| |||||| ||||||    
T  8625 gtaggttgtagttttgggaatttgggaaattagggttagaagttgtaattggttgatttaatagtagaa 8557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 501 - 446
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||  ||||||| |||||||||| |||||||||||||||||||    
T  501 gtaggttgtagttatgagaatttggaaattaggttttgaagttgtaattggttgtt 446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 13461 - 13516
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||| ||| |||||||||||||||||| |||||| ||||||||||||    
T  13461 gtaggttgtagttttgggaatttgggaattaggttttgaagttataattggttgtt 13516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 3121 - 3188
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaa 68  Q
    ||||||||||||| ||| ||||| ||||||||| |||||||||||||||||||| || ||| ||||||    
T  3121 gtaggttgtagttttgggaatttaggaattagggttagaagttgtaattggttgattaaatggtagaa 3188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 169068 - 169123
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||| ||||||    
T  169068 gtaggttgtagttatgggaatttgggaattaggttttgaacttgtaattagttgtt 169123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 143594 - 143539
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    |||||||||||||||   ||||||||||||| |||| |||||||||||||||||||    
T  143594 gtaggttgtagttattttaatttgggaattatgttttgaagttgtaattggttgtt 143539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 3)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 11173 - 11093
Alignment:
Q  159 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    |||||||||||| |||| ||||||| |||| ||||||||| ||||||||||||||| ||||||| ||| ||| ||||||||||    
T  11173 ggttttgatttggaatt-gattgtt-aaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataa 11093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 1222 - 1174
Alignment:
Q  159 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaat 207  Q
    |||||||| || ||||||| ||||||||||| |||||||||||||||||    
T  1222 ggttttgaatttcaatttggttgttgaaagtctaggtaatccaatgaat 1174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 6728 - 6680
Alignment:
Q  159 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaat 207  Q
    |||||||| || ||||||| ||||||||||| |||||||||||||||||    
T  6728 ggttttgaatttcaatttggttgttgaaagtctaggtaatccaatgaat 6680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 175 - 249
Target Start/End: Original strand, 69970 - 70043
Alignment:
Q  175 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggt 249  Q
    ||||||||| |||| ||||||||||||||||||||||||| ||||||| ||| ||| ||||||| || |||||||    
T  69970 ttgattgtt-aaagagtaggtaatccaatgaattaacataagaattgaagttcaggctgtagaaaaaaaataggt 70043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 241
Target Start/End: Original strand, 21895 - 21959
Alignment:
Q  176 tgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    |||||||| |||| ||||||||| ||||||||||||||| ||||||||||| ||| ||||||||||    
T  21895 tgattgtt-aaagagtaggtaattcaatgaattaacataagaattgatgttcaggctgtagaataa 21959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 18212 - 18296
Alignment:
Q  159 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataaca 243  Q
    |||||||| ||| ||||||||| ||||||||||| ||||||| |||||||||  |   | ||||||||||||||||||| |||||    
T  18212 ggttttgaattgtaatttgattattgaaagtgtaagtaatccgatgaattaatgtgaaagttgatgtttaggttgtagagtaaca 18296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 37; Significance: 0.000000000006; HSPs: 3)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 10840 - 10888
Alignment:
Q  19 aatttgggaattaggtttagaagttgtaattggttgttttaattgtaga 67  Q
    ||||||||||||||| |||||||||||||||||||||| |||| |||||    
T  10840 aatttgggaattagggttagaagttgtaattggttgttgtaatagtaga 10888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 1872 - 1807
Alignment:
Q  175 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    ||||||||| |||| ||||||||| ||||||||||||||| ||||||| ||| ||| ||||||||||    
T  1872 ttgattgtt-aaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataa 1807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 53
Target Start/End: Original strand, 5124 - 5156
Alignment:
Q  21 tttgggaattaggtttagaagttgtaattggtt 53  Q
    ||||||||||||| |||||||||||||||||||    
T  5124 tttgggaattagggttagaagttgtaattggtt 5156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 4664 - 4605
Alignment:
Q  2 taggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaat 61  Q
    |||||||| ||| ||| |||||| |||||||||||||||||||||||| |||| ||||||    
T  4664 taggttgtggttttgggaatttgagaattaggtttagaagttgtaattagttggtttaat 4605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 18731 - 18770
Alignment:
Q  21 tttgggaattaggtttagaagttgtaattggttgttttaa 60  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  18731 tttgggaattaggtttagaagttgtaattggttgatttaa 18770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 60
Target Start/End: Complemental strand, 13911 - 13872
Alignment:
Q  21 tttgggaattaggtttagaagttgtaattggttgttttaa 60  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  13911 tttgggaattaggtttagaagttgtaattggttgatttaa 13872  T

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Target: scaffold0008 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 135573 - 135640
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaa 68  Q
    ||||||||||||| ||| ||||||||||||||  |||||||||| ||||||||  |||||| ||||||    
T  135573 gtaggttgtagttttgggaatttgggaattagagttagaagttgaaattggttaatttaatagtagaa 135640  T

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Target: scaffold0515 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 229
Target Start/End: Complemental strand, 4964 - 4911
Alignment:
Q  175 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttag 229  Q
    ||||||||| |||| ||||||||||||||||||||||||| ||||||| ||||||    
T  4964 ttgattgtt-aaagagtaggtaatccaatgaattaacataagaattgaagtttag 4911  T

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Target: scaffold0436 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 8895 - 8830
Alignment:
Q  175 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    ||||||||| |||| ||||||||| ||||||||||||||| ||||||| ||| ||| ||||||||||    
T  8895 ttgattgtt-aaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataa 8830  T

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Target: scaffold0306 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 229
Target Start/End: Complemental strand, 4964 - 4911
Alignment:
Q  175 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttag 229  Q
    ||||||||| |||| ||||||||||||||||||||||||| ||||||| ||||||    
T  4964 ttgattgtt-aaagagtaggtaatccaatgaattaacataagaattgaagtttag 4911  T

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Target: scaffold0165 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 254
Target Start/End: Complemental strand, 31869 - 31787
Alignment:
Q  172 aatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggtgatgt 254  Q
    ||||||||| ||||||||||||  ||||||||||||||| ||   ||||||||||  ||||||||||||| | ||||| ||||    
T  31869 aatttgatttttgaaagtgtagaaaatccaatgaattaaaatgaaaattgatgttctggttgtagaataaaagtaggtaatgt 31787  T

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Target: scaffold0138 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 21032 - 20967
Alignment:
Q  175 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    ||||||||| |||| ||||||||| ||||||||||||||| ||||||| ||| ||| ||||||||||    
T  21032 ttgattgtt-aaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataa 20967  T

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Target: scaffold0061 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 14703 - 14768
Alignment:
Q  175 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    ||||||||| |||| |||||||||| ||| |||||||||| ||||||| ||| ||||||||||||||    
T  14703 ttgattgtt-aaagagtaggtaatctaataaattaacataagaattgaagttcaggttgtagaataa 14768  T

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Target: scaffold0061; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 23761 - 23826
Alignment:
Q  175 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    ||||||||| |||| |||||||||| ||| |||||||||| ||||||| ||| ||||||||||||||    
T  23761 ttgattgtt-aaagagtaggtaatctaataaattaacataagaattgaagttcaggttgtagaataa 23826  T

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Target: scaffold0034 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 29333 - 29398
Alignment:
Q  175 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    ||||||||| |||| ||||||||| ||||||||||||||| ||||||| ||| ||| ||||||||||    
T  29333 ttgattgtt-aaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataa 29398  T

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Target: scaffold0023 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 216 - 254
Target Start/End: Complemental strand, 163230 - 163192
Alignment:
Q  216 gaattgatgtttaggttgtagaataacaataggtgatgt 254  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  163230 gaattgatgttcaggttgtagaataacaataggtgatgt 163192  T

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Target: scaffold0174 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 11355 - 11318
Alignment:
Q  19 aatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    |||||||||||||||||| |||||||||||||||||||    
T  11355 aatttgggaattaggttttgaagttgtaattggttgtt 11318  T

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Target: scaffold0174; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 5235 - 5198
Alignment:
Q  19 aatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  5235 aatttgggaattacgttttgaagttgtaattggttgtt 5198  T

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Target: scaffold0213 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 19066 - 19019
Alignment:
Q  159 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaat 207  Q
    |||||||| || |||||||||||||||| ||||||||||||||||||||    
T  19066 ggttttgaatttcaatttgattgttgaa-gtgtaggtaatccaatgaat 19019  T

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Target: scaffold0036 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 78254 - 78298
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgt 45  Q
    ||||||||||||||||| ||||||| |||||||||| ||||||||    
T  78254 gtaggttgtagttatgggaatttggaaattaggttttgaagttgt 78298  T

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Target: scaffold0019 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 24200 - 24235
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggttt 36  Q
    ||||||||||||||||| ||||||||||||||||||    
T  24200 gtaggttgtagttatgggaatttgggaattaggttt 24235  T

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Target: scaffold0594 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 241
Target Start/End: Complemental strand, 2176 - 2110
Alignment:
Q  175 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    |||||||||||||| ||||||||||| ||||| |||  ||  ||||| |||| ||||||||||||||    
T  2176 ttgattgttgaaagagtaggtaatccgatgaactaaggtaataattggtgttcaggttgtagaataa 2110  T

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Target: scaffold0035 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 241
Target Start/End: Original strand, 43888 - 43969
Alignment:
Q  159 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 241  Q
    |||||||||||| |||| |||||||||||  |||| |||| |||| |||||   ||  |||||||||||||||||||||||||    
T  43888 ggttttgatttggaatt-gattgttgaaaaagtagataattcaattaattagtgtacaaattgatgtttaggttgtagaataa 43969  T

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Target: scaffold1434 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold1434
Description:

Target: scaffold1434; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 169 - 242
Target Start/End: Original strand, 1470 - 1543
Alignment:
Q  169 tgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataac 242  Q
    |||||||||||| ||||||||||| ||||||  |||||||||  |   | ||||||||||||||||||| ||||    
T  1470 tgcaatttgattcttgaaagtgtaagtaatctgatgaattaatgtgaaagttgatgtttaggttgtagagtaac 1543  T

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Target: scaffold0285 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 19726 - 19689
Alignment:
Q  19 aatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  19726 aatttgggaattaggtttttaagttgtaattggttgtt 19689  T

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Target: scaffold0047 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 79025 - 78992
Alignment:
Q  23 tgggaattaggtttagaagttgtaattggttgtt 56  Q
    |||||||||||||| |||||||||||||||||||    
T  79025 tgggaattaggttttgaagttgtaattggttgtt 78992  T

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Target: scaffold0251 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 20155 - 20202
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaatt 49  Q
    ||||||| ||||| ||| ||||||||||||| |||||||||||||||||    
T  20155 gtaggttatagtt-tgggaatttgggaattatgtttagaagttgtaatt 20202  T

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Target: scaffold0056 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 67103 - 67043
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagtt-gtaattggttgttttaa 60  Q
    ||||||||||||| | | ||||||||||| ||||||||||||| | ||||||||| |||||    
T  67103 gtaggttgtagttttaggaatttgggaataaggtttagaagttggaaattggttggtttaa 67043  T

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