View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10294_high_2 (Length: 252)
Name: NF10294_high_2
Description: NF10294
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10294_high_2 |
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Alignment Details
Target: chr6 (Bit Score: 148; Significance: 3e-78; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 13 - 235
Target Start/End: Complemental strand, 1508623 - 1508400
Alignment:
| Q |
13 |
catagggaaataataaagttcaatttatgatagcttgtaaatttgg-gaacaaataaagctttgttaggaaaaggttcaaaacttaaaagcgagtgaatt |
111 |
Q |
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| T |
1508623 |
catagggaaataataaagttcaatttatgatagcttgtaaatttggtgaacaaataaagctttgttaggaaaaggttcaaaacttaaaagcaagtgaatt |
1508524 |
T |
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| Q |
112 |
aattggaagnnnnnnnnnaccgttcaaacaaaaataaaggaaagcgtacaaaaaattctcacatgatgaaactttaggaatggt-aaataaaatnnnnnn |
210 |
Q |
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||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |
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| T |
1508523 |
aattggaag-ttttttttaccgttcaaacaaaaataaaggaaagcgtacaaaaaattttcacatgatgaaactttaggaatggtaaaataaaataaaaaa |
1508425 |
T |
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| Q |
211 |
nttgattagtacaactccactaggg |
235 |
Q |
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|||||||||||||||||||||||| |
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| T |
1508424 |
attgattagtacaactccactaggg |
1508400 |
T |
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