View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10294_high_4 (Length: 240)
Name: NF10294_high_4
Description: NF10294
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10294_high_4 |
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Alignment Details
Target: chr3 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 37630441 - 37630219
Alignment:
| Q |
1 |
ttccatttggtggttatactgttgataagttcaggcctacattctttcaaagattgacctcttatgcttatgatcattattgtcccataacccaacttgt |
100 |
Q |
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||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
37630441 |
ttccatttggtggttataccgttgataagttcaggcctactttctttcaaagattgaccacttatgcttatgatcattattgtcccataacccaacttgt |
37630342 |
T |
|
| Q |
101 |
ccttcatcattcatgtacagccacaatgaaaacgaaaggagatggataaagacaagaaccaacatatatttatatattccacatgaacaatactttatta |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
37630341 |
ccttcatcattcatgtacagccacaatgaaaacgaaaggagatggataaagacaagaaccaacatatatttatttattccacatgaacaatactttatta |
37630242 |
T |
|
| Q |
201 |
ttaacaaacattgatattttctc |
223 |
Q |
| |
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||||||||||||||||||||||| |
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| T |
37630241 |
ttaacaaacattgatattttctc |
37630219 |
T |
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