View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10294_low_3 (Length: 333)
Name: NF10294_low_3
Description: NF10294
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10294_low_3 |
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Alignment Details
Target: chr8 (Bit Score: 296; Significance: 1e-166; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 1 - 317
Target Start/End: Original strand, 36836131 - 36836449
Alignment:
| Q |
1 |
gaaaaaggctaacacataatttacaagaatgtttaagttttccatgtgtcttaaaattatagatgaggagaaattgatccgatgatagcttaatattttg |
100 |
Q |
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||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
36836131 |
gaaaaaggctaacacataaattacaagaatgtttaagttttccatgtgtcttaaaattatagatgaggagaaattgatctgatgatagcttaatattttg |
36836230 |
T |
|
| Q |
101 |
tgattcagttttcacacatacacatgatagagtaggatctcggctgaagtacaaaatcaatacaatattcaatcctaaaaccgttctatagaggatttca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36836231 |
tgattcagttttcacacatacacatgatagagtaggatctcggctgaagtacaaaatcaatacaatattcaatcctaaaaccgttctatagaggatttca |
36836330 |
T |
|
| Q |
201 |
aca--tgtgtgcgcgcgtttgacaactgttcttgtgataatgatctaggctcactaggtgttgtgggattgaggggaagtggctcgtgataatgcatgag |
298 |
Q |
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||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36836331 |
acatgtgtgtgcgcgagtttgacaactgttcttgtgataatgatctaggctcactaggtgttgtgggattgaggggaagtggctcgtgataatgcatgag |
36836430 |
T |
|
| Q |
299 |
agcctcagtacgttgtacc |
317 |
Q |
| |
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||||||||||||||||||| |
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| T |
36836431 |
agcctcagtacgttgtacc |
36836449 |
T |
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