View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10295_low_5 (Length: 266)
Name: NF10295_low_5
Description: NF10295
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10295_low_5 |
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Alignment Details
Target: chr1 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 18 - 260
Target Start/End: Original strand, 52769373 - 52769619
Alignment:
| Q |
18 |
agatacaggatggatgacaatgttttagattcaaatattgttagtaagtattttggaaaacagttagcgatctaattctgtataatatatgat----tga |
113 |
Q |
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| T |
52769373 |
agatacaggatggatgacaatgttttagattcaaatattgttagcaagtattttggaaaacagttagcgatctaattctgtataatatatgattgattga |
52769472 |
T |
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| Q |
114 |
ttgattagtgagaatgtgaaaagaagaaagatacctgaagaaaatgactgtatctgacggcctgaaagtcatctttaatatagaggagagcacctgatat |
213 |
Q |
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| T |
52769473 |
ttgattagtgagaatgtgaaaagaagaaagatacctgaagaaaatgactgtatctgacggcctgaaagtcatctttaatatagaggagagcacctgatat |
52769572 |
T |
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| Q |
214 |
aacacctgaacaaaacaagaatcataatgttattgttattgttattg |
260 |
Q |
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||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
52769573 |
aacacctgaacaaaacaagaatcatcatgttattgttattgttattg |
52769619 |
T |
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