View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10296_high_7 (Length: 251)
Name: NF10296_high_7
Description: NF10296
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10296_high_7 |
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Alignment Details
Target: chr1 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 41950954 - 41951195
Alignment:
| Q |
1 |
tcttttacgtggtgcagaataatgcaagctgtgcaatttctttgtggaattttgaccattccaaaaacaatgtactgcgaaagtctagaatattatgaga |
100 |
Q |
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| T |
41950954 |
tcttttacgtggtgcagaataatgcaagctgtgcaatttctttgtggaattttgaccattccaaaaacaatgtactgcgaaagtctagaatattatgaga |
41951053 |
T |
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| Q |
101 |
atattagaagaaaggctatgggccatgtacagtgtacgttagtaccaacttgccaagtagtaggtctttctttattggacaaatgtctcttaatcaactt |
200 |
Q |
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|||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41951054 |
atattagaag-aaggctatgggccatgtacagtgtacg-tagtaccaacttgccaagtagtaggtctttctttattggacaaatgtctcttaatcaactt |
41951151 |
T |
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| Q |
201 |
gttcacaccttcctaggtcatgcctgctgctggaccctatgctt |
244 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41951152 |
gttcacaccttcctaggtcatgcctgctgctggaccctatgctt |
41951195 |
T |
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