View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10297_low_5 (Length: 338)

Name: NF10297_low_5
Description: NF10297
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10297_low_5
NF10297_low_5
[»] chr1 (49 HSPs)
chr1 (25-268)||(33087871-33088114)
chr1 (212-322)||(36613902-36614016)
chr1 (223-325)||(35594217-35594321)
chr1 (226-325)||(45149965-45150068)
chr1 (221-325)||(45148579-45148686)
chr1 (223-322)||(24422800-24422903)
chr1 (223-325)||(11437194-11437300)
chr1 (223-325)||(51685760-51685866)
chr1 (226-325)||(39153111-39153214)
chr1 (221-322)||(39699765-39699869)
chr1 (221-322)||(41364827-41364931)
chr1 (222-325)||(51684365-51684472)
chr1 (245-325)||(7675454-7675536)
chr1 (226-325)||(43058789-43058891)
chr1 (226-325)||(43378708-43378810)
chr1 (223-323)||(23980463-23980567)
chr1 (226-322)||(24426073-24426173)
chr1 (223-322)||(33088615-33088718)
chr1 (221-328)||(46066523-46066631)
chr1 (223-314)||(52274968-52275063)
chr1 (223-325)||(11436042-11436148)
chr1 (226-325)||(37526873-37526975)
chr1 (221-325)||(39222468-39222577)
chr1 (223-325)||(36612853-36612958)
chr1 (214-297)||(14999276-14999361)
chr1 (213-325)||(39151921-39152037)
chr1 (223-325)||(45157204-45157309)
chr1 (223-297)||(7674528-7674603)
chr1 (223-322)||(41366129-41366231)
chr1 (226-325)||(50680335-50680437)
chr1 (223-325)||(25652715-25652820)
chr1 (226-322)||(52276161-52276261)
chr1 (226-322)||(52828068-52828168)
chr1 (223-322)||(35067000-35067103)
chr1 (223-322)||(52827347-52827450)
chr1 (244-325)||(43060001-43060084)
chr1 (223-325)||(44404442-44404548)
chr1 (223-325)||(35595187-35595294)
chr1 (226-322)||(7983053-7983152)
chr1 (223-322)||(12389980-12390082)
chr1 (223-314)||(39698563-39698657)
chr1 (222-275)||(33739093-33739147)
chr1 (210-325)||(40384711-40384831)
chr1 (221-274)||(7987905-7987958)
chr1 (282-322)||(3000169-3000209)
chr1 (271-322)||(44411964-44412016)
chr1 (282-322)||(46524602-46524642)
chr1 (282-322)||(46525798-46525838)
chr1 (219-325)||(50681603-50681709)
[»] chr2 (39 HSPs)
chr2 (224-325)||(13030293-13030395)
chr2 (223-325)||(22587949-22588054)
chr2 (224-325)||(18300720-18300822)
chr2 (219-303)||(24476862-24476947)
chr2 (226-325)||(28617926-28618027)
chr2 (223-322)||(22848191-22848294)
chr2 (223-322)||(38840491-38840594)
chr2 (223-316)||(7899886-7899983)
chr2 (223-325)||(18905983-18906088)
chr2 (218-322)||(36449773-36449881)
chr2 (219-277)||(21837066-21837124)
chr2 (221-325)||(18299371-18299479)
chr2 (223-325)||(18797246-18797353)
chr2 (244-322)||(11258809-11258889)
chr2 (223-322)||(38839242-38839345)
chr2 (223-322)||(11257622-11257724)
chr2 (223-325)||(18904367-18904473)
chr2 (223-274)||(21837303-21837354)
chr2 (223-325)||(23869530-23869635)
chr2 (224-325)||(26545516-26545621)
chr2 (224-322)||(1033212-1033312)
chr2 (226-322)||(7898694-7898794)
chr2 (240-325)||(24475243-24475330)
chr2 (236-302)||(32739638-32739705)
chr2 (226-322)||(36450919-36451018)
chr2 (223-309)||(18868924-18869013)
chr2 (221-322)||(41878090-41878197)
chr2 (223-322)||(11938787-11938889)
chr2 (242-325)||(22587522-22587606)
chr2 (223-322)||(41879210-41879313)
chr2 (223-323)||(802588-802691)
chr2 (226-322)||(8535654-8535752)
chr2 (223-314)||(1034475-1034570)
chr2 (226-323)||(26544152-26544252)
chr2 (249-323)||(810778-810854)
chr2 (226-322)||(13567975-13568073)
chr2 (282-322)||(27553763-27553803)
chr2 (279-322)||(1093144-1093188)
chr2 (282-322)||(12812899-12812939)
[»] chr5 (35 HSPs)
chr5 (221-325)||(22940618-22940725)
chr5 (223-325)||(25523069-25523175)
chr5 (223-325)||(19752912-19753017)
chr5 (214-313)||(5962579-5962680)
chr5 (223-322)||(28538676-28538779)
chr5 (223-325)||(19754125-19754232)
chr5 (226-325)||(24332916-24333019)
chr5 (223-325)||(18486897-18487003)
chr5 (223-322)||(18154494-18154595)
chr5 (223-322)||(5777901-5778002)
chr5 (223-322)||(36486486-36486589)
chr5 (223-322)||(5778834-5778937)
chr5 (223-303)||(33158098-33158181)
chr5 (241-314)||(7311610-7311685)
chr5 (223-325)||(16650850-16650956)
chr5 (241-322)||(28539818-28539901)
chr5 (223-325)||(18485138-18485251)
chr5 (222-314)||(25056387-25056483)
chr5 (221-297)||(1796052-1796131)
chr5 (221-303)||(20214194-20214278)
chr5 (263-325)||(25524093-25524157)
chr5 (226-296)||(2685749-2685820)
chr5 (223-322)||(21835041-21835143)
chr5 (226-325)||(42195137-42195238)
chr5 (217-325)||(25055406-25055518)
chr5 (223-315)||(33160291-33160387)
chr5 (223-297)||(25524151-25524229)
chr5 (218-325)||(42196195-42196306)
chr5 (271-325)||(16650043-16650098)
chr5 (241-322)||(36485320-36485403)
chr5 (226-322)||(20216761-20216861)
chr5 (242-294)||(34893686-34893739)
chr5 (236-323)||(1016861-1016949)
chr5 (223-301)||(5730441-5730523)
chr5 (223-322)||(40255670-40255773)
[»] chr3 (46 HSPs)
chr3 (223-325)||(12703495-12703600)
chr3 (223-322)||(29932697-29932799)
chr3 (223-322)||(29981851-29981953)
chr3 (223-325)||(12700175-12700279)
chr3 (223-322)||(54540788-54540891)
chr3 (223-325)||(7758402-7758508)
chr3 (219-325)||(47614181-47614291)
chr3 (224-314)||(8456479-8456572)
chr3 (223-322)||(29931226-29931329)
chr3 (223-322)||(29980380-29980483)
chr3 (223-325)||(534499-534605)
chr3 (226-314)||(7267647-7267738)
chr3 (218-323)||(22776809-22776918)
chr3 (221-322)||(51037534-51037638)
chr3 (223-325)||(19984849-19984955)
chr3 (227-321)||(24516464-24516562)
chr3 (217-322)||(51469966-51470075)
chr3 (221-322)||(52840602-52840707)
chr3 (226-322)||(47610578-47610678)
chr3 (226-322)||(7268825-7268924)
chr3 (245-322)||(55191993-55192072)
chr3 (223-325)||(11671336-11671441)
chr3 (226-325)||(52104484-52104583)
chr3 (223-325)||(19986065-19986173)
chr3 (223-321)||(5029682-5029783)
chr3 (223-323)||(46721217-46721321)
chr3 (226-325)||(54987002-54987103)
chr3 (223-322)||(47609697-47609800)
chr3 (223-322)||(54539755-54539858)
chr3 (221-315)||(535787-535885)
chr3 (248-325)||(31645000-31645079)
chr3 (223-274)||(47615596-47615649)
chr3 (223-322)||(51470453-51470555)
chr3 (221-302)||(53901407-53901489)
chr3 (226-325)||(34019140-34019241)
chr3 (221-325)||(49216245-49216353)
chr3 (223-295)||(5001200-5001275)
chr3 (245-296)||(6170296-6170348)
chr3 (282-322)||(10584038-10584078)
chr3 (278-325)||(23770402-23770450)
chr3 (223-322)||(52839037-52839140)
chr3 (222-323)||(46719940-46720045)
chr3 (244-311)||(6171251-6171319)
chr3 (245-312)||(6249633-6249701)
chr3 (226-320)||(40426778-40426877)
chr3 (297-325)||(47615572-47615600)
[»] chr6 (29 HSPs)
chr6 (221-325)||(7314878-7314985)
chr6 (221-325)||(1829598-1829706)
chr6 (221-318)||(16703568-16703666)
chr6 (221-322)||(30495695-30495799)
chr6 (223-322)||(8659265-8659368)
chr6 (223-322)||(8660202-8660304)
chr6 (223-322)||(8821873-8821976)
chr6 (223-322)||(16704495-16704598)
chr6 (223-325)||(7316289-7316395)
chr6 (223-322)||(10784592-10784696)
chr6 (226-322)||(26575052-26575150)
chr6 (219-315)||(8822798-8822898)
chr6 (223-321)||(27322067-27322168)
chr6 (223-322)||(3721612-3721715)
chr6 (223-312)||(14823583-14823677)
chr6 (241-325)||(17496817-17496904)
chr6 (241-322)||(10785911-10785994)
chr6 (246-320)||(12350823-12350898)
chr6 (244-322)||(26574642-26574721)
chr6 (223-322)||(27437828-27437931)
chr6 (223-301)||(3722527-3722608)
chr6 (223-312)||(14822360-14822453)
chr6 (265-322)||(22418893-22418950)
chr6 (223-321)||(27318315-27318418)
chr6 (226-322)||(34834577-34834677)
chr6 (223-325)||(6840194-6840298)
chr6 (236-325)||(26949180-26949268)
chr6 (223-296)||(6842308-6842384)
chr6 (223-322)||(3333024-3333127)
[»] chr8 (42 HSPs)
chr8 (217-325)||(5513976-5514087)
chr8 (220-325)||(10006341-10006450)
chr8 (223-325)||(32207320-32207424)
chr8 (244-325)||(1824073-1824156)
chr8 (244-325)||(1858518-1858601)
chr8 (223-325)||(10007758-10007864)
chr8 (223-325)||(22221359-22221465)
chr8 (223-325)||(22227701-22227807)
chr8 (223-325)||(30335639-30335745)
chr8 (223-322)||(12353359-12353460)
chr8 (245-325)||(24123893-24123975)
chr8 (223-321)||(8388464-8388564)
chr8 (223-325)||(2379919-2380021)
chr8 (241-322)||(18978039-18978122)
chr8 (226-322)||(29968335-29968434)
chr8 (223-325)||(30336496-30336602)
chr8 (221-322)||(11287774-11287879)
chr8 (223-323)||(1823552-1823656)
chr8 (223-323)||(1857997-1858101)
chr8 (226-322)||(11282011-11282111)
chr8 (221-325)||(22220386-22220494)
chr8 (242-322)||(45112891-45112972)
chr8 (223-325)||(5514266-5514370)
chr8 (241-322)||(18970930-18971013)
chr8 (241-322)||(24488678-24488760)
chr8 (223-314)||(12351921-12352016)
chr8 (223-325)||(24359809-24359913)
chr8 (224-322)||(18979118-18979220)
chr8 (226-325)||(30570251-30570353)
chr8 (223-315)||(5003103-5003197)
chr8 (223-325)||(24122883-24122988)
chr8 (223-322)||(11283207-11283310)
chr8 (226-325)||(40471142-40471244)
chr8 (225-325)||(43661267-43661371)
chr8 (223-268)||(11288914-11288961)
chr8 (223-286)||(23170034-23170098)
chr8 (221-274)||(24483141-24483196)
chr8 (223-311)||(45114526-45114617)
chr8 (226-319)||(8389690-8389787)
chr8 (237-325)||(40469356-40469446)
chr8 (223-325)||(30568887-30568992)
chr8 (221-274)||(32973984-32974039)
[»] chr7 (31 HSPs)
chr7 (221-325)||(18371422-18371530)
chr7 (240-325)||(22629505-22629592)
chr7 (223-315)||(127337-127431)
chr7 (241-325)||(18372452-18372538)
chr7 (223-325)||(21505416-21505520)
chr7 (221-322)||(31659620-31659726)
chr7 (236-325)||(47369796-47369887)
chr7 (223-325)||(7500455-7500560)
chr7 (223-322)||(3227592-3227695)
chr7 (223-325)||(7501847-7501953)
chr7 (223-325)||(22630447-22630553)
chr7 (226-325)||(42886281-42886384)
chr7 (223-315)||(17782558-17782654)
chr7 (223-322)||(31949322-31949425)
chr7 (223-297)||(597308-597381)
chr7 (221-322)||(47525365-47525470)
chr7 (221-322)||(48934901-48935006)
chr7 (224-322)||(3227109-3227210)
chr7 (228-325)||(14999150-14999249)
chr7 (223-322)||(31949800-31949903)
chr7 (225-322)||(17781663-17781764)
chr7 (218-320)||(11658374-11658480)
chr7 (226-322)||(11662549-11662649)
chr7 (223-292)||(20163585-20163657)
chr7 (223-274)||(14998008-14998062)
chr7 (282-325)||(14998042-14998086)
chr7 (223-297)||(43899448-43899523)
chr7 (226-322)||(128599-128699)
chr7 (223-286)||(34174018-34174083)
chr7 (226-325)||(43900484-43900585)
chr7 (230-286)||(47524532-47524591)
[»] chr4 (44 HSPs)
chr4 (223-317)||(49308031-49308127)
chr4 (223-325)||(1290193-1290299)
chr4 (226-325)||(8155741-8155843)
chr4 (226-322)||(35934347-35934445)
chr4 (214-322)||(31600983-31601095)
chr4 (223-325)||(1835097-1835203)
chr4 (218-322)||(17382988-17383095)
chr4 (223-322)||(1963196-1963299)
chr4 (226-325)||(12129626-12129729)
chr4 (225-322)||(19750573-19750673)
chr4 (225-322)||(19789133-19789233)
chr4 (223-322)||(31599789-31599892)
chr4 (220-322)||(10471386-10471492)
chr4 (223-315)||(26421627-26421722)
chr4 (223-322)||(10470546-10470649)
chr4 (223-322)||(25685820-25685923)
chr4 (223-319)||(17388212-17388311)
chr4 (223-322)||(5526124-5526226)
chr4 (223-322)||(8757675-8757777)
chr4 (222-322)||(25684933-25685037)
chr4 (223-325)||(49306775-49306879)
chr4 (221-325)||(1834117-1834226)
chr4 (221-322)||(33310087-33310189)
chr4 (223-322)||(48781044-48781146)
chr4 (223-322)||(13386530-13386634)
chr4 (226-322)||(8758835-8758935)
chr4 (223-325)||(10447006-10447113)
chr4 (223-333)||(13509346-13509459)
chr4 (223-322)||(48780248-48780351)
chr4 (241-322)||(5525379-5525462)
chr4 (245-322)||(46638723-46638802)
chr4 (221-325)||(50909667-50909776)
chr4 (253-325)||(21539066-21539140)
chr4 (223-321)||(14868890-14868990)
chr4 (223-321)||(14876944-14877044)
chr4 (223-322)||(52491605-52491708)
chr4 (240-325)||(10448255-10448342)
chr4 (226-314)||(35935539-35935631)
chr4 (248-296)||(26420342-26420390)
chr4 (282-322)||(33997852-33997892)
chr4 (223-314)||(13386014-13386111)
chr4 (241-322)||(21178016-21178099)
chr4 (226-268)||(55603585-55603628)
chr4 (226-325)||(1289100-1289203)
[»] scaffold0302 (2 HSPs)
scaffold0302 (223-322)||(17470-17573)
scaffold0302 (222-322)||(18774-18878)
[»] scaffold0186 (2 HSPs)
scaffold0186 (221-322)||(23079-23182)
scaffold0186 (223-271)||(23941-23991)
[»] scaffold0294 (2 HSPs)
scaffold0294 (223-316)||(5442-5539)
scaffold0294 (223-316)||(4442-4539)
[»] scaffold0019 (2 HSPs)
scaffold0019 (221-325)||(60088-60196)
scaffold0019 (224-325)||(61454-61559)
[»] scaffold0586 (2 HSPs)
scaffold0586 (223-315)||(9032-9126)
scaffold0586 (271-325)||(6394-6449)
[»] scaffold0320 (1 HSPs)
scaffold0320 (223-325)||(19488-19594)
[»] scaffold0093 (2 HSPs)
scaffold0093 (217-313)||(2472-2571)
scaffold0093 (217-313)||(7095-7194)
[»] scaffold2034 (2 HSPs)
scaffold2034 (222-323)||(232-337)
scaffold2034 (245-323)||(975-1055)
[»] scaffold0632 (1 HSPs)
scaffold0632 (223-322)||(3306-3408)
[»] scaffold0112 (2 HSPs)
scaffold0112 (217-316)||(37142-37244)
scaffold0112 (273-316)||(40641-40684)
[»] scaffold1303 (1 HSPs)
scaffold1303 (223-325)||(1439-1545)
[»] scaffold0369 (1 HSPs)
scaffold0369 (223-311)||(13193-13283)
[»] scaffold0059 (2 HSPs)
scaffold0059 (236-314)||(3690-3770)
scaffold0059 (224-322)||(4728-4829)
[»] scaffold0003 (1 HSPs)
scaffold0003 (223-322)||(49431-49534)
[»] scaffold0049 (1 HSPs)
scaffold0049 (271-322)||(7413-7465)
[»] scaffold0045 (1 HSPs)
scaffold0045 (246-325)||(48334-48413)


Alignment Details
Target: chr1 (Bit Score: 156; Significance: 8e-83; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 25 - 268
Target Start/End: Original strand, 33087871 - 33088114
Alignment:
Q  25 cgactttgtgacagtactcggtcagattttacagtactctttgttggagtgatttctggcaaaatctaaccgtcttgctatgnnnnnnnggtcttgttgg 124  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||       | |||||||||    
T  33087871 cgactttgtgacagtactcggtcagattttacagtactctttgttggagtgatttctggcaaaatccaaccgtcttggtatgtttttttg-tcttgttgg 33087969  T
Q  125 ctaataaatgatgcacttcttcgtggttctttttctttatagtacgaatattttgacaagggagaattttatttgcaaagtgtaatcaattttatattgg 224  Q
    |||||||||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||    
T  33087970 ctaataaatgatgcaaatcttcgtggttcttttcctttatagtacgaatattttgacaagggagaattttacttgcaaagtgttatcaattttatatcgg 33088069  T
Q  225 ctaaagtgcactttttc-ccctaactttcaaaaacttgtaatttt 268  Q
    |||||||  ||| || |  ||||||||||||||||||||||||||    
T  33088070 ctaaagtatactgttccttcctaactttcaaaaacttgtaatttt 33088114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 212 - 322
Target Start/End: Complemental strand, 36614016 - 36613902
Alignment:
Q  212 aattttatattggctaaagtgcactttt--tcccctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttg-ccccctaaga 307  Q
    |||| |||||||||||||||||| ||||  |||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||    
T  36614016 aattctatattggctaaagtgcatttttcctcccctaacttttaaaaacttgtaattttggccccctaagtacaaaaactacaattttgaccccctaaga 36613917  T
Q  308 tttagcccctttgca 322  Q
    ||||||| |||||||    
T  36613916 tttagcctctttgca 36613902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 223 - 325
Target Start/End: Original strand, 35594217 - 35594321
Alignment:
Q  223 ggctaaagtgcactttttc--ccctaactttcaaaaacttgtaattttggcccctaagtacaaaaattacaattttgccccctaagatttagcccctttg 320  Q
    ||||||||||||||||| |  |||||||||||||||||||| ||||||| ||||||||||  |||| |||||||||| ||||||| ||||||||||||||    
T  35594217 ggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttgacccctaagtattaaaactacaattttgacccctaaaatttagcccctttg 35594316  T
Q  321 catct 325  Q
    |||||    
T  35594317 catct 35594321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 226 - 325
Target Start/End: Complemental strand, 45150068 - 45149965
Alignment:
Q  226 taaagtgcactttttcccc-taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg--ccccctaagatttagcccctttgc 321  Q
    |||||||||||||| |||| ||||||||||||||||| |||||||||||| ||||||||||||  |||||||||  ||||||||||||||||||||||||    
T  45150068 taaagtgcacttttcccccctaactttcaaaaacttgcaattttggccccttaagtacaaaaacaacaattttgccccccctaagatttagcccctttgc 45149969  T
Q  322 atct 325  Q
    ||||    
T  45149968 atct 45149965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 221 - 325
Target Start/End: Original strand, 45148579 - 45148686
Alignment:
Q  221 ttggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttg-ccccctaagatttagcccc 316  Q
    |||||||||||||||||||||||   ||||||||||||||||| |||||||| |||||||||| ||||| |||||||||| |||||||||||||| ||||    
T  45148579 ttggctaaagtgcactttttcccgcttaactttcaaaaacttgcaattttggccccctaagta-aaaaactacaattttgcccccctaagatttaacccc 45148677  T
Q  317 tttgcatct 325  Q
    |||||||||    
T  45148678 tttgcatct 45148686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 223 - 322
Target Start/End: Original strand, 24422800 - 24422903
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaatttt-gccccctaagatttagcccctt 318  Q
    ||||||||||||||||| ||||  ||||||||||||||||| ||||||| |||| |||||||||||| ||||||||| |||||||||||||||||||| |    
T  24422800 ggctaaagtgcacttttacccccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttggccccctaagatttagccccat 24422899  T
Q  319 tgca 322  Q
    ||||    
T  24422900 tgca 24422903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 223 - 325
Target Start/End: Complemental strand, 11437300 - 11437194
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagcccctt 318  Q
    ||||||||||||||||||||||  ||||||||||||||||| |||||||| ||| |||||||||||| ||||||||| ||||||||||||||| ||| ||    
T  11437300 ggctaaagtgcactttttcccccttaactttcaaaaacttgcaattttggtcccttaagtacaaaaactacaattttggccccctaagatttaacccttt 11437201  T
Q  319 tgcatct 325  Q
    | |||||    
T  11437200 tacatct 11437194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 223 - 325
Target Start/End: Complemental strand, 51685866 - 51685760
Alignment:
Q  223 ggctaaagtgcactttttcccct--aactttcaaaaacttgtaattttggccc-ctaagtacaaaaattacaattttg-ccccctaagatttagcccctt 318  Q
    ||||||||||||||||| |||||  |||||||||||| |||  |||||||||| ||| ||||||||| |||||||||| |||||||||||||||||||||    
T  51685866 ggctaaagtgcacttttccccctctaactttcaaaaagttgcgattttggccctctatgtacaaaaactacaattttgaccccctaagatttagcccctt 51685767  T
Q  319 tgcatct 325  Q
    |||||||    
T  51685766 tgcatct 51685760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 226 - 325
Target Start/End: Complemental strand, 39153214 - 39153111
Alignment:
Q  226 taaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagcccctttgc 321  Q
    |||||||||||||||||||  ||| ||||||||||||| |||||||||||| || ||||||||| |||||||||| ||| |||||||||| |||||||||    
T  39153214 taaagtgcactttttcccccttaagtttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttgaccctctaagatttaacccctttgc 39153115  T
Q  322 atct 325  Q
    ||||    
T  39153114 atct 39153111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 221 - 322
Target Start/End: Complemental strand, 39699869 - 39699765
Alignment:
Q  221 ttggctaaagtgcactttttcccc-taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagcccct 317  Q
    ||||||||||||||||||| |||| |||||||||| |||||| ||||||| |||| |||||||| ||| |||||||||| |||||||||||||||||||     
T  39699869 ttggctaaagtgcacttttcccccctaactttcaataacttgcaattttgaccccctaagtacagaaactacaattttggccccctaagatttagcccca 39699770  T
Q  318 ttgca 322  Q
    |||||    
T  39699769 ttgca 39699765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 221 - 322
Target Start/End: Original strand, 41364827 - 41364931
Alignment:
Q  221 ttggctaaagtgcactttt-tcccctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttg-ccccctaagatttagcccct 317  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||| ||| ||||  ||||||| | |||||||||||||||||||     
T  41364827 ttggctaaagtgcacttttctcccctaactttcaaaaacttgcaattttggccccctaaataccaaaaccacaatttagcccccctaagatttagcccca 41364926  T
Q  318 ttgca 322  Q
    |||||    
T  41364927 ttgca 41364931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 222 - 325
Target Start/End: Original strand, 51684365 - 51684472
Alignment:
Q  222 tggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagcccct 317  Q
    |||||||||||||||||| ||||  ||||||| ||||| ||| |||||||||||| || ||| ||||| |||||||||| ||||||||||||||||||||    
T  51684365 tggctaaagtgcacttttccccccttaacttttaaaaagttgcaattttggccccctatgtataaaaactacaattttggccccctaagatttagcccct 51684464  T
Q  318 ttgcatct 325  Q
    ||||||||    
T  51684465 ttgcatct 51684472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 245 - 325
Target Start/End: Complemental strand, 7675536 - 7675454
Alignment:
Q  245 taactttcaaaaacttgtaattttggcc-cctaagtacaaaaattacaattttg-ccccctaagatttagcccctttgcatct 325  Q
    ||||||||||||||||| ||||||| || |||||||| |||||||| ||||||| ||||||||||||||||||||||||||||    
T  7675536 taactttcaaaaacttgcaattttgccctcctaagtaaaaaaattataattttgaccccctaagatttagcccctttgcatct 7675454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 226 - 325
Target Start/End: Original strand, 43058789 - 43058891
Alignment:
Q  226 taaagtgcactttttcccc-taactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaatttt-gccccctaagatttagcccctttgca 322  Q
    |||||| |||||||||||| ||||||| ||||||||| |||||||  |||||||||||||||| ||||||||| |||| |||||||||||||||||| ||    
T  43058789 taaagtacactttttccccctaactttgaaaaacttgcaattttgaccccctaagtacaaaaactacaattttagccctctaagatttagcccctttaca 43058888  T
Q  323 tct 325  Q
    |||    
T  43058889 tct 43058891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 226 - 325
Target Start/End: Complemental strand, 43378810 - 43378708
Alignment:
Q  226 taaagtgcactttt-tcccctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttg-ccccctaagatttagcccctttgca 322  Q
    |||||||||||||| || | ||||||||||||||||  |||||||  ||||||||||||||||||||||||||| || ||||||||||||| ||||||||    
T  43378810 taaagtgcacttttctctcttaactttcaaaaacttacaattttgatcccctaagtacaaaaattacaattttgaccacctaagatttagcacctttgca 43378711  T
Q  323 tct 325  Q
    |||    
T  43378710 tct 43378708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 223 - 323
Target Start/End: Complemental strand, 23980567 - 23980463
Alignment:
Q  223 ggctaaagtgcactttttcccct--aactttcaaaaacttgtaattttggc-ccctaagtacaaaaattacaattttgccc-cctaagatttagcccctt 318  Q
    ||||||||||||||||| |||||  |||||| ||||||||| ||||||||| ||||||||||||||| || |||||||  | ||||||||||||||||||    
T  23980567 ggctaaagtgcacttttccccctctaactttaaaaaacttgcaattttggctccctaagtacaaaaactataattttggtctcctaagatttagcccctt 23980468  T
Q  319 tgcat 323  Q
    |||||    
T  23980467 tgcat 23980463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 226 - 322
Target Start/End: Complemental strand, 24426173 - 24426073
Alignment:
Q  226 taaagtgcactttttcccct--aactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagcccctttgc 321  Q
    |||||||||||||  |||||  |||||||||||||||| |||||||| |||||||||||||||| ||||||||| | |||||||||||||||||| ||||    
T  24426173 taaagtgcactttcccccctctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttagtcccctaagatttagccccattgc 24426074  T
Q  322 a 322  Q
    |    
T  24426073 a 24426073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 223 - 322
Target Start/End: Complemental strand, 33088718 - 33088615
Alignment:
Q  223 ggctaaagtgcactttttcccct--aactttcaaaaacttgtaattttggcccct-aagtacaaaaattacaattttgcc-ccctaagatttagcccctt 318  Q
    ||||||||||||||||| || ||  ||| |||||||||||| ||||||| ||| | ||||||||||| |||||||||||| |||||||||||||||||||    
T  33088718 ggctaaagtgcacttttccctctctaacattcaaaaacttgcaattttgaccctttaagtacaaaaactacaattttgcctccctaagatttagcccctt 33088619  T
Q  319 tgca 322  Q
    ||||    
T  33088618 tgca 33088615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 221 - 328
Target Start/End: Original strand, 46066523 - 46066631
Alignment:
Q  221 ttggctaaagtgcactttttcccctaactttcaaaaacttgtaattttggcccctaa-gtacaaaaattacaattttgccccctaagatttagccccttt 319  Q
    |||||| |||||||||||| | ||||||||||||||| |||  ||||| |||||| | ||||||||| |||||||||  ||||||||||||||||  |||    
T  46066523 ttggcttaagtgcacttttcctcctaactttcaaaaagttgcgattttagccccttatgtacaaaaactacaattttagcccctaagatttagccaattt 46066622  T
Q  320 gcatctctg 328  Q
    |||||||||    
T  46066623 gcatctctg 46066631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 223 - 314
Target Start/End: Original strand, 52274968 - 52275063
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaatttt-gccccctaagatttagcc 314  Q
    ||||||||||||||||| ||||  ||||||||||||||||| |||||||  |||||||||||||||| ||||||||| | ||||||||||||||||    
T  52274968 ggctaaagtgcacttttacccccctaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgggcccctaagatttagcc 52275063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 325
Target Start/End: Original strand, 11436042 - 11436148
Alignment:
Q  223 ggctaaagtgcactttttcccct--aactttcaaaaacttgtaattttggcc-cctaagtacaaaaattacaatttt-gccccctaagatttagcccctt 318  Q
    ||||||||||||||||| |||||  |||||||||||||||| ||||||||||   |||||| ||||| ||||||||| ||||||||||||||| ||| ||    
T  11436042 ggctaaagtgcacttttccccctttaactttcaaaaacttgcaattttggccttttaagtataaaaactacaattttggccccctaagatttaacccatt 11436141  T
Q  319 tgcatct 325  Q
    |||||||    
T  11436142 tgcatct 11436148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 226 - 325
Target Start/End: Complemental strand, 37526975 - 37526873
Alignment:
Q  226 taaagtgcactttttcccc--taactttcaaaaacttgtaattttggc-ccctaagtacaaaaattacaattttgccccctaagatttagcccctttgca 322  Q
    ||||||| |||||| ||||  ||||||||||||||||| ||||||||| |||||| || | |||  ||||||||| ||||||||||||||||||||||||    
T  37526975 taaagtgtacttttccccccttaactttcaaaaacttgcaattttggctccctaaatatagaaaccacaattttggcccctaagatttagcccctttgca 37526876  T
Q  323 tct 325  Q
    |||    
T  37526875 tct 37526873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 221 - 325
Target Start/End: Complemental strand, 39222577 - 39222468
Alignment:
Q  221 ttggctaaagtgcactttttcccc---taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaat-tttgccccctaagatttagccc 315  Q
    ||||||||||||||||||| ||||   ||||||||||||||||| |||||||| |||||||||| ||||| |||||| || |||| ||||||||| ||||    
T  39222577 ttggctaaagtgcacttttaccccctttaactttcaaaaacttgcaattttggccccctaagtataaaaactacaatgttagccctctaagattttgccc 39222478  T
Q  316 ctttgcatct 325  Q
     |||||||||    
T  39222477 atttgcatct 39222468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 223 - 325
Target Start/End: Original strand, 36612853 - 36612958
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccctaagtacaaaaattacaatttt-gccccctaagatttagccccttt 319  Q
    |||||||||||| |||| ||||  ||||||||||||| ||| ||||||||  | |||||||||||| |||||||||  ||||||||||||||| ||||||    
T  36612853 ggctaaagtgcatttttccccccttaactttcaaaaatttgcaattttggatcttaagtacaaaaactacaattttaaccccctaagatttagtcccttt 36612952  T
Q  320 gcatct 325  Q
    ||||||    
T  36612953 gcatct 36612958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 214 - 297
Target Start/End: Original strand, 14999276 - 14999361
Alignment:
Q  214 ttttatattggctaaagtgcactttttcccc-taactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaattttg 297  Q
    |||||||| |||||||||| |||||| |||| ||||||||||||||||| |||||||  |||||||||||||||| ||||||||||    
T  14999276 ttttatataggctaaagtgtacttttcccccctaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttg 14999361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 213 - 325
Target Start/End: Original strand, 39151921 - 39152037
Alignment:
Q  213 attttatattggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttg-ccccctaagat 308  Q
    ||||||| | || ||||||||| |||||||||  ||| |||||||||||||||||||||| |||||| ||||||||| |||||||||| | |  ||||||    
T  39151921 attttatttaggttaaagtgcattttttcccccttaagtttcaaaaacttgtaattttggccccctatgtacaaaaactacaattttgactctttaagat 39152020  T
Q  309 ttagcccctttgcatct 325  Q
    ||| |||||||||||||    
T  39152021 ttaacccctttgcatct 39152037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 223 - 325
Target Start/End: Complemental strand, 45157309 - 45157204
Alignment:
Q  223 ggctaaagtgcactttttcccc-taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttg-ccccctaagatttagccccttt 319  Q
    ||||||||||||||||  |||| ||| ||||||||||||| |||||||| |||||| ||||||||| |||||||||| |||  ||||||||| |||||||    
T  45157309 ggctaaagtgcactttccccccctaagtttcaaaaacttgcaattttggccccctatgtacaaaaactacaattttgaccctttaagatttaaccccttt 45157210  T
Q  320 gcatct 325  Q
    ||||||    
T  45157209 gcatct 45157204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 223 - 297
Target Start/End: Original strand, 7674528 - 7674603
Alignment:
Q  223 ggctaaagtgcactttttcccc-taactttcaaaaacttgtaattttggcccctaagtacaaaaattacaattttg 297  Q
    ||||||||||| ||||| |||| ||||||| ||||||||| |||||||| ||||||||||||||| ||||||||||    
T  7674528 ggctaaagtgcccttttcccccctaacttttaaaaacttgcaattttgggccctaagtacaaaaactacaattttg 7674603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 223 - 322
Target Start/End: Complemental strand, 41366231 - 41366129
Alignment:
Q  223 ggctaaagtgcactttttccc--ctaactttcaaaaacttgtaattttggcccct-aagtacaaaaattacaattttgccccctaagatttagccccttt 319  Q
    ||||||||||||||||| |||  ||||||||||||||| || |||||| |||||| |||||  ||||  ||||||| |||||||||||||||||||| ||    
T  41366231 ggctaaagtgcacttttcccctcctaactttcaaaaacatgcaattttagccccttaagtatcaaaaccacaatttagccccctaagatttagccccatt 41366132  T
Q  320 gca 322  Q
    |||    
T  41366131 gca 41366129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 226 - 325
Target Start/End: Original strand, 50680335 - 50680437
Alignment:
Q  226 taaagtgcactttttcccct-aactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaatttt-gccccctaagatttagcccctttgca 322  Q
    ||||||||| |||| ||||| ||||| |||||||||| |||||||||||| |||||| ||||| || |||||| | ||||||||||||| ||||||||||    
T  50680335 taaagtgcatttttcccccttaacttccaaaaacttgcaattttggccccctaagtataaaaactataattttagtcccctaagatttaacccctttgca 50680434  T
Q  323 tct 325  Q
    |||    
T  50680435 tct 50680437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 223 - 325
Target Start/End: Original strand, 25652715 - 25652820
Alignment:
Q  223 ggctaaagtgcactttttccc-ctaactttcaaaaacttgtaattttggcccct-aagtacaaaaattacaattttgcccc-ctaagatttagccccttt 319  Q
    ||||||||||||| ||||||  |||| ||||||||||||| |||||||  |||| |||||||||||||| || |||| ||| |||||||||||||| |||    
T  25652715 ggctaaagtgcaccttttccttctaattttcaaaaacttgcaattttgatcccttaagtacaaaaattataaatttggcccgctaagatttagcccattt 25652814  T
Q  320 gcatct 325  Q
    ||||||    
T  25652815 gcatct 25652820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 226 - 322
Target Start/End: Complemental strand, 52276261 - 52276161
Alignment:
Q  226 taaagtgcactttttccc--ctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaatta-caattttgccccctaagatttagcccctttgc 321  Q
    |||||||||||||  |||  |||||||||||||| |||||||||||| |||||||||||||||| ||  ||||| | |||||||||||||||||| ||||    
T  52276261 taaagtgcactttcccccttctaactttcaaaaatttgtaattttggccccctaagtacaaaaactataaatttagtcccctaagatttagccccattgc 52276162  T
Q  322 a 322  Q
    |    
T  52276161 a 52276161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 226 - 322
Target Start/End: Complemental strand, 52828168 - 52828068
Alignment:
Q  226 taaagtgcactttttcccct--aactttcaaaaacttgtaattttggc-ccctaagtacaaaaattacaattttgccccc-taagatttagcccctttgc 321  Q
    |||||||||||||| |||||  || ||||||||||||| ||||||||| |||||||||| ||||  ||||||| |||||| |||||||||||||| ||||    
T  52828168 taaagtgcacttttccccctctaattttcaaaaacttgcaattttggctccctaagtaccaaaaccacaatttagcccccctaagatttagccccattgc 52828069  T
Q  322 a 322  Q
    |    
T  52828068 a 52828068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 223 - 322
Target Start/End: Complemental strand, 35067103 - 35067000
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagcccctt 318  Q
    ||||||||||||||||| ||||  ||| ||||||||| |||  ||||||||||| || | ||||||| |||||||||| |||||||| ||||||||||||    
T  35067103 ggctaaagtgcacttttccccccttaagtttcaaaaagttgcgattttggccccctatgaacaaaaactacaattttggccccctaatatttagcccctt 35067004  T
Q  319 tgca 322  Q
    ||||    
T  35067003 tgca 35067000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 223 - 322
Target Start/End: Original strand, 52827347 - 52827450
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaattt-tgccccctaagatttagcccctt 318  Q
    ||||||||||||||||| ||||  ||||||||||||||||| |||||||  ||||||||||| ||||  |||||||   ||||||||||||||||||| |    
T  52827347 ggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttaacccccctaagatttagccccat 52827446  T
Q  319 tgca 322  Q
    ||||    
T  52827447 tgca 52827450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 325
Target Start/End: Complemental strand, 43060084 - 43060001
Alignment:
Q  244 ctaactttcaaaaacttgtaattttggcccct-aagtacaaaaattacaattttg-ccccctaagatttagcccctttgcatct 325  Q
    |||||||||||||| ||| ||||||| ||||| ||||||||||| |||||||||| |||| ||||||||||| | |||||||||    
T  43060084 ctaactttcaaaaatttgaaattttgaccccttaagtacaaaaactacaattttgaccccttaagatttagctcatttgcatct 43060001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 325
Target Start/End: Original strand, 44404442 - 44404548
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaatttt-gccccctaagatttagcccctt 318  Q
    ||||||| |||||||||||||   ||||||||||||||| | |||||| ||||| |||||||||||| || |||||| ||||||||| ||||||||  ||    
T  44404442 ggctaaaatgcactttttccctcataactttcaaaaactagcaattttagccccctaagtacaaaaactataattttggccccctaaaatttagccaatt 44404541  T
Q  319 tgcatct 325  Q
    |||||||    
T  44404542 tgcatct 44404548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 223 - 325
Target Start/End: Complemental strand, 35595294 - 35595187
Alignment:
Q  223 ggctaaagtgcactttttcccct--aactttcaaaaactt-gtaattttggcccc-taagtacaaaaatta-caattttgccccctaagatttagcccct 317  Q
    |||||||||| |||||| |||||  |||||| |||||||| | ||||||| |||| || ||| ||||| || |||||||| |||||||||||||||||||    
T  35595294 ggctaaagtgtacttttccccctctaactttaaaaaacttagcaattttgaccccctatgtataaaaactaacaattttggcccctaagatttagcccct 35595195  T
Q  318 ttgcatct 325  Q
    ||||||||    
T  35595194 ttgcatct 35595187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 322
Target Start/End: Original strand, 7983053 - 7983152
Alignment:
Q  226 taaagtgcactttt-tcccctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttg-ccccctaagatttagcccctttgca 322  Q
    |||||||||||||| |||| |||||||||| |||||| |||||||| |||||| |||  ||||  ||||||||| |||||||||||||| |||| |||||    
T  7983053 taaagtgcacttttctcccgtaactttcaacaacttgcaattttggccccctatgtatcaaaaccacaattttgcccccctaagatttatccccattgca 7983152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 322
Target Start/End: Complemental strand, 12390082 - 12389980
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttgccccctaagatttagccccttt 319  Q
    |||||||||||| |||| || |  ||||||||||||| |||  ||||||  |||||| |||||||||||| ||||||| ||||  |||||||||||||||    
T  12390082 ggctaaagtgcatttttccctccttaactttcaaaaagttgcgattttgatcccctatgtacaaaaattataattttggccccctagatttagccccttt 12389983  T
Q  320 gca 322  Q
    |||    
T  12389982 gca 12389980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 314
Target Start/End: Original strand, 39698563 - 39698657
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttgccccctaagatttagcc 314  Q
    ||||||||||||||||  ||||  ||||||| ||||||||  |||||||||||| |||||||| ||| || ||||||| || |||||||||||||    
T  39698563 ggctaaagtgcactttaccccccttaacttttaaaaactttcaattttggccccctaagtacagaaactataattttggccactaagatttagcc 39698657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 275
Target Start/End: Original strand, 33739093 - 33739147
Alignment:
Q  222 tggctaaagtgcactttttccc-ctaactttcaaaaacttgtaattttggcccct 275  Q
    |||||||| |||| |||||||| ||||||||||||| |||||||||||| |||||    
T  33739093 tggctaaaatgcattttttccctctaactttcaaaagcttgtaattttgacccct 33739147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 325
Target Start/End: Original strand, 40384711 - 40384831
Alignment:
Q  210 tcaattttatattggctaaagtgcactttttccc---ctaactttcaaaaacttgtaatttt-ggcccctaagtacaaaaattacaattttg-cccccta 304  Q
    ||||| |||| |||| ||||||||||||||| ||    ||| ||||||||| ||| |||||| | | |||| ||||||||| ||||||||||  ||||||    
T  40384711 tcaatattattttggttaaagtgcacttttttcctctttaattttcaaaaagttgcaattttagtctcctatgtacaaaaactacaattttgatccccta 40384810  T
Q  305 agatttagcccctttgcatct 325  Q
    | |||||||| ||||||||||    
T  40384811 aaatttagcctctttgcatct 40384831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 274
Target Start/End: Complemental strand, 7987958 - 7987905
Alignment:
Q  221 ttggctaaagtgcactttttcccctaactttcaaaaacttgtaattttggcccc 274  Q
    ||||| |||||||| |||| ||||||||||||||||| ||  ||||||||||||    
T  7987958 ttggccaaagtgcatttttccccctaactttcaaaaatttacaattttggcccc 7987905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 322
Target Start/End: Complemental strand, 3000209 - 3000169
Alignment:
Q  282 aaaaattacaattttgccccctaagatttagcccctttgca 322  Q
    |||||| | |||||||||||||||| |||||||||||||||    
T  3000209 aaaaataaaaattttgccccctaagttttagcccctttgca 3000169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 44412016 - 44411964
Alignment:
Q  271 cccctaagtacaaaaattacaattttgcccc-ctaagatttagcccctttgca 322  Q
    |||||||||||||||| ||||||||| ||||  |||||||||| |||||||||    
T  44412016 cccctaagtacaaaaactacaattttacccctttaagatttaggccctttgca 44411964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 322
Target Start/End: Original strand, 46524602 - 46524642
Alignment:
Q  282 aaaaattacaattttgccccctaagatttagcccctttgca 322  Q
    |||||| | ||||| ||||||||||||||||||||||||||    
T  46524602 aaaaataaaaatttggccccctaagatttagcccctttgca 46524642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 322
Target Start/End: Complemental strand, 46525838 - 46525798
Alignment:
Q  282 aaaaattacaattttgccccctaagatttagcccctttgca 322  Q
    |||||| | ||||| ||||||||||||||||||||||||||    
T  46525838 aaaaatgaaaatttggccccctaagatttagcccctttgca 46525798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 325
Target Start/End: Complemental strand, 50681709 - 50681603
Alignment:
Q  219 tattggctaaagtgcactttttcc--cctaactttcaaaaacttgtaattttggc-ccctaagtacaaaaattacaattttgccccctaagatttagccc 315  Q
    ||||||||||||||||||||| ||  | ||| ||||||||||||| ||||||||| | |||| || ||||| |||||| |||  |||   |||||||||     
T  50681709 tattggctaaagtgcacttttcccctcttaattttcaaaaacttgcaattttggctctctaactataaaaactacaatattggtccc---gatttagcct 50681613  T
Q  316 ctttgcatct 325  Q
    ||||||||||    
T  50681612 ctttgcatct 50681603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 83; Significance: 3e-39; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 224 - 325
Target Start/End: Original strand, 13030293 - 13030395
Alignment:
Q  224 gctaaagtgcactttttcccctaactttcaaaaacttgtaattttggcccctaagtacaaaaattacaa-ttttgccccctaagatttagcccctttgca 322  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||    
T  13030293 gctaaagtgcacttttccccctaactttcaaaaacttgtaattttggcccctaagtacaaaaattacaatttttgccccctaagatttagctcttttgca 13030392  T
Q  323 tct 325  Q
    |||    
T  13030393 tct 13030395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 223 - 325
Target Start/End: Complemental strand, 22588054 - 22587949
Alignment:
Q  223 ggctaaagtgcactttttcccct---aactttcaaaaacttgtaattttggcccctaagtacaaaaattacaatttt-gccccctaagatttagcccctt 318  Q
    |||||||||||| ||||||||||   |||||||||||||||| |||||||||||||| ||||||||| ||||||||| ||||| ||||||||||||||||    
T  22588054 ggctaaagtgca-tttttcccctcataactttcaaaaacttgcaattttggcccctatgtacaaaaactacaattttggccccttaagatttagcccctt 22587956  T
Q  319 tgcatct 325  Q
    |||||||    
T  22587955 tgcatct 22587949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 224 - 325
Target Start/End: Complemental strand, 18300822 - 18300720
Alignment:
Q  224 gctaaagtgcactttttcccctaactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttgccccctaagatttagcccctttgca 322  Q
    |||||| ||||||||| ||||||||||||| ||||||| ||||||| |||| |||||||||||| |||||||||| ||||||  ||||||||||||||||    
T  18300822 gctaaattgcacttttccccctaactttcataaacttgcaattttgaccccctaagtacaaaaactacaattttgacccctataatttagcccctttgca 18300723  T
Q  323 tct 325  Q
    |||    
T  18300722 tct 18300720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 219 - 303
Target Start/End: Complemental strand, 24476947 - 24476862
Alignment:
Q  219 tattggctaaagtgcactttttcccctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttgccccct 303  Q
    ||||||||| |||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||| |||||||||| |||||    
T  24476947 tattggctagagtgcactttttcccccaacttttaaaaacttgtaattttggtcccctaagtacaaaaactacaattttgacccct 24476862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 226 - 325
Target Start/End: Original strand, 28617926 - 28618027
Alignment:
Q  226 taaagtgcactttttc-ccctaactttcaaaaacttgtaattttggcccct-aagtacaaaaattacaattttgccccctaagatttagcccctttgcat 323  Q
    |||||| || |||||| ||||||||||||||| |||| ||||||||||||  ||||||||||| | ||||||||||||||||||||||||||||||||||    
T  28617926 taaagtacattttttctccctaactttcaaaatcttgcaattttggccccccaagtacaaaaacttcaattttgccccctaagatttagcccctttgcat 28618025  T
Q  324 ct 325  Q
    ||    
T  28618026 ct 28618027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 223 - 322
Target Start/End: Original strand, 22848191 - 22848294
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagcccctt 318  Q
    ||||||||||||||||| ||||  ||||||||||||||||| |||||||| ||||||| |||||||| ||||||||| || |||||||||||||||||||    
T  22848191 ggctaaagtgcacttttacccccctaactttcaaaaacttgcaattttggtcccctaaatacaaaaactacaattttggctccctaagatttagcccctt 22848290  T
Q  319 tgca 322  Q
    ||||    
T  22848291 tgca 22848294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 223 - 322
Target Start/End: Complemental strand, 38840594 - 38840491
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaatttt-gccccctaagatttagcccctt 318  Q
    ||||||||||||||||| ||||  ||||||||||||||||| |||||| ||||| |||||||||||| ||||||||| |||||||||||||||||||| |    
T  38840594 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttagccccctaagatttagccccat 38840495  T
Q  319 tgca 322  Q
    ||||    
T  38840494 tgca 38840491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 223 - 316
Target Start/End: Complemental strand, 7899983 - 7899886
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagcccc 316  Q
    ||||||||||||||||| ||||  ||||||||||||||||| |||||||| |||||||||||| ||| ||||||||| ||||||||||||||||||||    
T  7899983 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggtcccctaagtacagaaactacaattttagccccctaagatttagcccc 7899886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 223 - 325
Target Start/End: Complemental strand, 18906088 - 18905983
Alignment:
Q  223 ggctaaagtgcactttttccc--ctaactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttgccccctaagatttagccccttt 319  Q
    ||||||||||||||||| |||  |||||||||||||||||| |||||| ||||| |||||||||||| |||||||||  ||||||||||||||| | |||    
T  18906088 ggctaaagtgcacttttccccttctaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttagcccctaagatttagctcattt 18905989  T
Q  320 gcatct 325  Q
    ||||||    
T  18905988 gcatct 18905983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 218 - 322
Target Start/End: Original strand, 36449773 - 36449881
Alignment:
Q  218 atattggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagc 313  Q
    |||| ||||||||||||||||| ||||  ||||||||||||||||| |||||||||||| |||||||||||| |||||||||| ||||| |||| ||||     
T  36449773 atataggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttgcccccccaagaattagg 36449872  T
Q  314 ccctttgca 322  Q
    |||||||||    
T  36449873 ccctttgca 36449881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 219 - 277
Target Start/End: Original strand, 21837066 - 21837124
Alignment:
Q  219 tattggctaaagtgcactttttcccctaactttcaaaaacttgtaattttggcccctaa 277  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  21837066 tattggctaaagtgcactttttcctctaactttcaaaaacttgcaattttggcccctaa 21837124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 221 - 325
Target Start/End: Original strand, 18299371 - 18299479
Alignment:
Q  221 ttggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcc-cctaagtacaaaaattacaatttt-gccccctaagatttagcccc 316  Q
    ||||||||||||||||||| | ||  ||||||||||||||||  |||||||||| |||||||| ||||| ||||||||| |||||||| ||||||||||     
T  18299371 ttggctaaagtgcacttttccacccgtaactttcaaaaactttcaattttggccacctaagtataaaaactacaattttggccccctatgatttagccct 18299470  T
Q  317 tttgcatct 325  Q
    |||||||||    
T  18299471 tttgcatct 18299479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 223 - 325
Target Start/End: Original strand, 18797246 - 18797353
Alignment:
Q  223 ggctaaagtgcactttttc---ccctaactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagcccct 317  Q
    ||||||||||||||||| |   |||||||||||||||||||| ||||||| |||| ||||||  |||| |||||||||| |||||||| |||||||||||    
T  18797246 ggctaaagtgcacttttccaccccctaactttcaaaaacttgcaattttgaccccttaagtattaaaactacaattttgaccccctaaaatttagcccct 18797345  T
Q  318 ttgcatct 325  Q
    ||||||||    
T  18797346 ttgcatct 18797353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 244 - 322
Target Start/End: Complemental strand, 11258889 - 11258809
Alignment:
Q  244 ctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagcccctttgca 322  Q
    |||||||||||||||||| |||||||| |||||||||||||||| ||||||||| | |||||||||||||||||| |||||    
T  11258889 ctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttagtcccctaagatttagccccattgca 11258809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 223 - 322
Target Start/End: Original strand, 38839242 - 38839345
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagcccctt 318  Q
    |||||||||||| |||||||||  ||| ||||||||||||| |||||| ||||| ||| |||||||| |||||||||| ||||||||||||||||||| |    
T  38839242 ggctaaagtgcattttttcccccttaattttcaaaaacttgcaattttagccccctaactacaaaaactacaattttggccccctaagatttagccccat 38839341  T
Q  319 tgca 322  Q
    ||||    
T  38839342 tgca 38839345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 322
Target Start/End: Original strand, 11257622 - 11257724
Alignment:
Q  223 ggctaaagtgcactttt--tcccctaactttcaaaaacttgtaattttggcccctaagtacaaaaattacaatttt-gccccctaagatttagccccttt 319  Q
    |||||||||||||||||  ||| |||||||||||||||||| ||||||   ||||||||| ||||| ||||||||| ||| |||||||||||||||| ||    
T  11257622 ggctaaagtgcacttttactcctctaactttcaaaaacttgcaattttaaaccctaagtataaaaactacaattttggcctcctaagatttagccccatt 11257721  T
Q  320 gca 322  Q
    |||    
T  11257722 gca 11257724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 325
Target Start/End: Original strand, 18904367 - 18904473
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaatttt-gccccctaagatttagcccctt 318  Q
    ||||||||||||||||| ||||  |||||||||||||| || |||||||||||| |||||||||||| ||||||||| |  |||||||| ||||||||||    
T  18904367 ggctaaagtgcacttttccccccttaactttcaaaaacgtgcaattttggccccttaagtacaaaaactacaattttggttccctaagaattagcccctt 18904466  T
Q  319 tgcatct 325  Q
    | |||||    
T  18904467 tacatct 18904473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 274
Target Start/End: Complemental strand, 21837354 - 21837303
Alignment:
Q  223 ggctaaagtgcactttttcccctaactttcaaaaacttgtaattttggcccc 274  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  21837354 ggctaaagtgcactttttcccctaactttcaaaaacttgcaattttggcccc 21837303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 325
Target Start/End: Complemental strand, 23869635 - 23869530
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaatttt-gccccctaagatttagcccctt 318  Q
    ||||||||||||||||| | ||  ||||||| ||||||||| |||||||||||| ||| |||||||| ||||||||| || |||||||||||||||||||    
T  23869635 ggctaaagtgcacttttccacccttaacttt-aaaaacttgcaattttggccccctaaatacaaaaactacaattttagctccctaagatttagcccctt 23869537  T
Q  319 tgcatct 325  Q
    |||||||    
T  23869536 tgcatct 23869530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 224 - 325
Target Start/End: Complemental strand, 26545621 - 26545516
Alignment:
Q  224 gctaaagtgcactttttcc--cctaactttcaaaaacttgtaattttggcccct-aagtacaaaaattacaattttgcccc-ctaagatttagccccttt 319  Q
    |||||||||||||||||||  | | ||||||||||| ||| ||||||| ||||| || ||||||||||| ||||||| ||| ||||||||||||||||||    
T  26545621 gctaaagtgcactttttccttcatgactttcaaaaatttgcaattttgaccccttaaatacaaaaattataattttgaccctctaagatttagccccttt 26545522  T
Q  320 gcatct 325  Q
    ||||||    
T  26545521 gcatct 26545516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 224 - 322
Target Start/End: Original strand, 1033212 - 1033312
Alignment:
Q  224 gctaaagtgcactttttcccc-taactttcaaaaacttgtaattttggcccctaagtacaaaaattacaattttgcccc-ctaagatttagcccctttgc 321  Q
    ||||||||| |||||| |||| ||||||| ||||||||| ||||||||||||||| ||| ||||||| |||||  |||| ||||||||||||||| ||||    
T  1033212 gctaaagtgtacttttcccccctaacttttaaaaacttgcaattttggcccctaaataccaaaattataatttaacccctctaagatttagccccattgc 1033311  T
Q  322 a 322  Q
    |    
T  1033312 a 1033312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 226 - 322
Target Start/End: Original strand, 7898694 - 7898794
Alignment:
Q  226 taaagtgcactttt-tcccct-aactttcaaaaacttgtaattttggcc-cctaagtacaaaaattacaattttg-ccccctaagatttagcccctttgc 321  Q
    |||||||||||||| |||||| |||||||||||||||| |||||| ||| |||||||| | ||| |||||||||| ||||||||||||||||||| ||||    
T  7898694 taaagtgcacttttctccccttaactttcaaaaacttgcaatttttgcctcctaagtatagaaactacaattttggccccctaagatttagccccattgc 7898793  T
Q  322 a 322  Q
    |    
T  7898794 a 7898794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 240 - 325
Target Start/End: Original strand, 24475243 - 24475330
Alignment:
Q  240 tcccctaactttcaaaaacttgtaa-ttttggcccctaagtacaaaaattacaatttt-gccccctaagatttagcccctttgcatct 325  Q
    ||||||||||||||||||||||||| ||||| |||||||||| ||||| ||||||||| ||||||||  ||||||| | |||||||||    
T  24475243 tcccctaactttcaaaaacttgtaatttttgccccctaagtataaaaactacaattttggccccctataatttagctcatttgcatct 24475330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 236 - 302
Target Start/End: Original strand, 32739638 - 32739705
Alignment:
Q  236 tttttcccctaactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttgccccc 302  Q
    |||||||||||||||||||||||||| |||||||||||| || ||||||||| |||||||||| ||||    
T  32739638 tttttcccctaactttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttggcccc 32739705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 322
Target Start/End: Complemental strand, 36451018 - 36450919
Alignment:
Q  226 taaagtgcactttttcccct-aactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattt-tgccccctaagatttagcccctttgca 322  Q
    |||||||||||||| ||||| |||||||||||||||| |||||||| |||||||||||| ||| ||||||||  |||||| |||| ||||| ||||||||    
T  36451018 taaagtgcacttttcccccttaactttcaaaaacttgcaattttggtcccctaagtacagaaactacaatttcggccccccaagaattagctcctttgca 36450919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 223 - 309
Target Start/End: Original strand, 18868924 - 18869013
Alignment:
Q  223 ggctaaagtgcactttttc--ccctaactttcaaaaacttgtaattttggcc-cctaagtacaaaaattacaattttgccccctaagatt 309  Q
    |||||||||| |||||| |  |||||||||||||||||||| |||||||||| ||||| |||||||| ||||||||||  ||||||||||    
T  18868924 ggctaaagtgtacttttccacccctaactttcaaaaacttgcaattttggcctcctaaatacaaaaactacaattttgatccctaagatt 18869013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 221 - 322
Target Start/End: Original strand, 41878090 - 41878197
Alignment:
Q  221 ttggctaaagtgcactttttcccct-aactttcaaaaact---tgtaattttggcccc-taagtacaaaaattacaatttt-gccccctaagatttagcc 314  Q
    ||||||||||||||||||  ||||| ||||||||||||||   || |||||||||||| |||||||| ||| ||||||||| ||||| ||||||||||||    
T  41878090 ttggctaaagtgcactttccccccttaactttcaaaaactatttgcaattttggccccctaagtacagaaactacaattttggccccttaagatttagcc 41878189  T
Q  315 cctttgca 322  Q
    || |||||    
T  41878190 ccattgca 41878197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 223 - 322
Target Start/End: Complemental strand, 11938889 - 11938787
Alignment:
Q  223 ggctaaagtgcactttttc--ccctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttg-ccccctaagatttagcccctt 318  Q
    ||||||||||||||||| |  |||||||||||||||||||| |||||||| | |||||||||||||| || ||||||| |||||||||| ||||| | ||    
T  11938889 ggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttggtctcctaagtacaaaaa-tataattttgcccccctaagaattagctcttt 11938791  T
Q  319 tgca 322  Q
    ||||    
T  11938790 tgca 11938787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 242 - 325
Target Start/End: Original strand, 22587522 - 22587606
Alignment:
Q  242 ccctaactttcaaaaacttgtaattttggcccctaagtacaaaaattacaatttt-gccccctaagatttagcccctttgcatct 325  Q
    |||||||||||||||| ||  |||||||| |||  | |||||||| ||||||||| |||||||||||||||||| ||||||||||    
T  22587522 ccctaactttcaaaaagttccaattttggtcccctattacaaaaactacaattttggccccctaagatttagcctctttgcatct 22587606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 223 - 322
Target Start/End: Complemental strand, 41879313 - 41879210
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagcccctt 318  Q
    ||||||||| ||||||||||||  ||| ||||||||||||| |||||||| |||||||||||| ||| |||||||||  |||||||| ||||||| || |    
T  41879313 ggctaaagtacactttttcccccttaattttcaaaaacttgcaattttggccccctaagtacataaactacaattttaaccccctaaaatttagcaccat 41879214  T
Q  319 tgca 322  Q
    ||||    
T  41879213 tgca 41879210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 323
Target Start/End: Complemental strand, 802691 - 802588
Alignment:
Q  223 ggctaaagtgcactttttcccc-taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttg-ccccctaagatttagccccttt 319  Q
    |||||||||| |||||| |||| ||| ||||||||||||| |||||||| |||||  ||||||||| |||||||||| ||| |||||||||  |||||||    
T  802691 ggctaaagtgtacttttcccccctaagtttcaaaaacttgcaattttggccccctgtgtacaaaaactacaattttgaccctctaagattttaccccttt 802592  T
Q  320 gcat 323  Q
    ||||    
T  802591 gcat 802588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 226 - 322
Target Start/End: Complemental strand, 8535752 - 8535654
Alignment:
Q  226 taaagtgcactttttcccctaactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaattttg-ccccctaagatttagcccctttgca 322  Q
    |||||| ||||||| | ||||||||| |||||||||||||||||  ||  |||||| | ||| |||||||||| |||||||||| ||||||||||||||    
T  8535752 taaagtacacttttcctcctaacttttaaaaacttgtaattttgatcctttaagtagagaaactacaattttgaccccctaagaattagcccctttgca 8535654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 223 - 314
Target Start/End: Complemental strand, 1034570 - 1034475
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttg-ccccctaagatttagcc 314  Q
    ||||||||||||||||| ||||  |||||||||||||| || |||||||| |||||| |||| ||||  ||||||| | |||||||||||||||||    
T  1034570 ggctaaagtgcacttttccccccttaactttcaaaaacatgcaattttggccccctacgtaccaaaaccacaatttagcccccctaagatttagcc 1034475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 323
Target Start/End: Original strand, 26544152 - 26544252
Alignment:
Q  226 taaagtgcacttttt--cccctaactttcaaaaacttgtaattttggcccctaagtacaaaaattacaatttt-gccccctaagatttagcccctttgca 322  Q
    ||||||||||||||   ||||||| ||| ||||| ||  ||||||||  |||||||||||||| |||| |||| ||| ||||||||||||| ||||||||    
T  26544152 taaagtgcacttttctacccctaatttttaaaaatttacaattttggttcctaagtacaaaaactacagttttagcctcctaagatttagcacctttgca 26544251  T
Q  323 t 323  Q
    |    
T  26544252 t 26544252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 323
Target Start/End: Complemental strand, 810854 - 810778
Alignment:
Q  249 tttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttg-ccccctaagatttagcccctttgcat 323  Q
    ||||||||||||| |||||||| |||||  ||||||||| |||||||||| ||| |||||||||  |||||||||||    
T  810854 tttcaaaaacttgcaattttggccccctgtgtacaaaaactacaattttgaccctctaagattttacccctttgcat 810778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 322
Target Start/End: Original strand, 13567975 - 13568073
Alignment:
Q  226 taaagtgcactttttccc--ctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttgccccctaagatttagcccctttgca 322  Q
    ||||||| |||||| |||  |||| ||||||||||||| |||||||| ||||||| |||||||| ||||||||||  ||| || | ||||||||||||||    
T  13567975 taaagtgtacttttccccttctaagtttcaaaaacttgcaattttggccccctaaatacaaaaactacaattttgatccc-aaaaattagcccctttgca 13568073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 322
Target Start/End: Complemental strand, 27553803 - 27553763
Alignment:
Q  282 aaaaattacaattttgccccctaagatttagcccctttgca 322  Q
    |||||| | ||||||||||||||||||||||||||||||||    
T  27553803 aaaaatgaaaattttgccccctaagatttagcccctttgca 27553763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 322
Target Start/End: Complemental strand, 1093188 - 1093144
Alignment:
Q  279 tacaaaaattacaattttgcccc-ctaagatttagcccctttgca 322  Q
    ||||||||||||||||||  ||| |||||||||||||||||||||    
T  1093188 tacaaaaattacaattttaacccgctaagatttagcccctttgca 1093144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 322
Target Start/End: Original strand, 12812899 - 12812939
Alignment:
Q  282 aaaaattacaattttgccccctaagatttagcccctttgca 322  Q
    |||||| | ||||| ||||||||||||||||||||||||||    
T  12812899 aaaaataataatttagccccctaagatttagcccctttgca 12812939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 6e-31; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 221 - 325
Target Start/End: Complemental strand, 22940725 - 22940618
Alignment:
Q  221 ttggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttgccccctaagatttagcccct 317  Q
    ||||||||||||||||||| ||||  ||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||    
T  22940725 ttggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacaaaaattacaattttgacccctaaaatttagcccct 22940626  T
Q  318 ttgcatct 325  Q
    || |||||    
T  22940625 tttcatct 22940618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 223 - 325
Target Start/End: Original strand, 25523069 - 25523175
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagcccctt 318  Q
    ||||||||||||||||| ||||  ||||||||||||||||| |||||| ||||| |||||||||||| |||||||||| |||||||||||||||||||||    
T  25523069 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttagccccctaagtacaaaaactacaattttgaccccctaagatttagcccctt 25523168  T
Q  319 tgcatct 325  Q
    |||||||    
T  25523169 tgcatct 25523175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 223 - 325
Target Start/End: Original strand, 19752912 - 19753017
Alignment:
Q  223 ggctaaagtgcactttttcccc-taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagccccttt 319  Q
    ||||||||||||||||| |||| ||||||||||||||||| |||||||| |||||||||||||||| ||||||||| |||||||| ||||||||||| ||    
T  19752912 ggctaaagtgcacttttcccccctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccccctatgatttagccccatt 19753011  T
Q  320 gcatct 325  Q
    ||||||    
T  19753012 gcatct 19753017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 214 - 313
Target Start/End: Complemental strand, 5962680 - 5962579
Alignment:
Q  214 ttttatattggctaaagtgcactttttcccctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagattta 311  Q
    ||||||||||||||||||||||||||||| || ||||||||||| |||||||||||| |||||||||||||||| || |||||| ||| ||||| |||||    
T  5962680 ttttatattggctaaagtgcactttttccactgactttcaaaaatttgtaattttggtcccctaagtacaaaaactataattttagccacctaatattta 5962581  T
Q  312 gc 313  Q
    ||    
T  5962580 gc 5962579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 223 - 322
Target Start/End: Original strand, 28538676 - 28538779
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccct-aagtacaaaaattacaatttt-gccccctaagatttagcccctt 318  Q
    ||||||||||||||||| | ||  ||||||||||||||||| ||||||| ||||| ||||||||||| ||||||||| ||||||||||||||||||||||    
T  28538676 ggctaaagtgcacttttccacccgtaactttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttagccccctaagatttagcccctt 28538775  T
Q  319 tgca 322  Q
    ||||    
T  28538776 tgca 28538779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 223 - 325
Target Start/End: Complemental strand, 19754232 - 19754125
Alignment:
Q  223 ggctaaagtgcacttttt---cccctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagcccct 317  Q
    |||||||||||| |||||   ||||||||||||||||||||| |||||||| ||||||| |||||||| ||||||||| |||||||| |||||||||||     
T  19754232 ggctaaagtgcatttttttcccccctaactttcaaaaacttgcaattttggccccctaaatacaaaaactacaattttggccccctatgatttagcccca 19754133  T
Q  318 ttgcatct 325  Q
    ||||||||    
T  19754132 ttgcatct 19754125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 226 - 325
Target Start/End: Original strand, 24332916 - 24333019
Alignment:
Q  226 taaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagcccctttgc 321  Q
    |||||||||||||||||||  ||| ||||||||||||| |||||||||||| || ||||||||| |||||||||| ||| |||||||||| |||||||||    
T  24332916 taaagtgcactttttcccccttaagtttcaaaaacttgcaattttggccccttatgtacaaaaactacaattttgaccctctaagatttaacccctttgc 24333015  T
Q  322 atct 325  Q
    ||||    
T  24333016 atct 24333019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 223 - 325
Target Start/End: Complemental strand, 18487003 - 18486897
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagcccctt 318  Q
    ||||||||||||||||  ||||  ||||||||||||||||| |||||||||||| |||||| | |||  ||||||||| |||||||||||||||||||||    
T  18487003 ggctaaagtgcactttcccccccttaactttcaaaaacttgcaattttggccccctaagtatagaaaccacaattttggccccctaagatttagcccctt 18486904  T
Q  319 tgcatct 325  Q
    |||||||    
T  18486903 tgcatct 18486897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 223 - 322
Target Start/End: Original strand, 18154494 - 18154595
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccctaagtacaaaaattacaattttgccccctaagatttagcccctttg 320  Q
    |||||||||| ||||||| |||  ||||||||||||||||  ||||||| |||||||||||||||| ||||||||||||| |||| ||||||| || |||    
T  18154494 ggctaaagtgaacttttttccccttaactttcaaaaacttacaattttgacccctaagtacaaaaactacaattttgccctctaaaatttagctccattg 18154593  T
Q  321 ca 322  Q
    ||    
T  18154594 ca 18154595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 223 - 322
Target Start/End: Original strand, 5777901 - 5778002
Alignment:
Q  223 ggctaaagtgcactttttcccctaactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaattttg-ccccctaagatttagcccctttg 320  Q
    ||||||||||||||||  ||||||||||||||||||||| |||||||  ||||||||||| ||||  ||||||| | ||||||||||||||||||| |||    
T  5777901 ggctaaagtgcactttcccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatttagccccattg 5778000  T
Q  321 ca 322  Q
    ||    
T  5778001 ca 5778002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 223 - 322
Target Start/End: Complemental strand, 36486589 - 36486486
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaatttt-gccccctaagatttagcccctt 318  Q
    |||| |||||||||||||||||  ||||||| ||||||||| ||||||| |||| |||||||||||| ||||||||| | |||||||||||||| |||||    
T  36486589 ggctgaagtgcactttttcccccctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttggtcccctaagatttagtccctt 36486490  T
Q  319 tgca 322  Q
    ||||    
T  36486489 tgca 36486486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 223 - 322
Target Start/End: Complemental strand, 5778937 - 5778834
Alignment:
Q  223 ggctaaagtgcactttttcccct--aactttcaaaaacttgtaa-ttttggcccctaagtacaaaaattacaattttg-ccccctaagatttagcccctt 318  Q
    ||||||||||||||||| |||||  |||||||||||||||| || ||||| ||||||||||| ||||  ||||||| | ||||||||||||||||||| |    
T  5778937 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaatttttgccccctaagtaccaaaaccacaatttagcccccctaagatttagccccat 5778838  T
Q  319 tgca 322  Q
    ||||    
T  5778837 tgca 5778834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 223 - 303
Target Start/End: Original strand, 33158098 - 33158181
Alignment:
Q  223 ggctaaagtgcacttttt--cccctaactttcaaaaacttgtaattttggc-ccctaagtacaaaaattacaattttgccccct 303  Q
    |||||||||||| |||||  ||||||||||||||||||||| ||||||| | ||||||||||||||| |||||||||| |||||    
T  33158098 ggctaaagtgcatttttttccccctaactttcaaaaacttgcaattttgacaccctaagtacaaaaactacaattttgacccct 33158181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 241 - 314
Target Start/End: Original strand, 7311610 - 7311685
Alignment:
Q  241 cccctaactttcaaaaacttgtaattttggcc-cctaagtacaaaaattacaatttt-gccccctaagatttagcc 314  Q
    ||||||||||||||||||||| ||| |||||| || ||||||||||| ||||||||| ||||||||||||||||||    
T  7311610 cccctaactttcaaaaacttgcaatattggcctcccaagtacaaaaactacaattttagccccctaagatttagcc 7311685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 223 - 325
Target Start/End: Complemental strand, 16650956 - 16650850
Alignment:
Q  223 ggctaaagtgcactttt--tcccctaactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaatttt-gccccctaagatttagcccctt 318  Q
    |||||||||||||||||   ||| ||||||| ||||||||| |||||||  |||||||||| ||||| ||||||||| |||||||||| |||||||| ||    
T  16650956 ggctaaagtgcacttttccacccttaacttttaaaaacttgcaattttgaccccctaagtataaaaactacaattttagccccctaaggtttagcccatt 16650857  T
Q  319 tgcatct 325  Q
    |||||||    
T  16650856 tgcatct 16650850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 241 - 322
Target Start/End: Complemental strand, 28539901 - 28539818
Alignment:
Q  241 cccctaactttcaaaaacttgtaattttggccc-ctaagtacaaaaattacaatttt-gccccctaagatttagcccctttgca 322  Q
    ||||||||||| ||||||||| ||||||| ||| ||||||||||||| ||||||||| | |||||||||||||| |||||||||    
T  28539901 cccctaacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaattttggtcccctaagatttagtccctttgca 28539818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 223 - 325
Target Start/End: Original strand, 18485138 - 18485251
Alignment:
Q  223 ggctaaagtgcactttttccc--ctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt--------gccccctaagattta 311  Q
    |||||||||||||||||||||  |||||||| ||||||||| |||||||| ||||||||||  ||||  ||||||||        |||||||||||||||    
T  18485138 ggctaaagtgcactttttcccctctaactttaaaaaacttgcaattttggccccctaagtatcaaaacaacaattttgggttttggccccctaagattta 18485237  T
Q  312 gcccctttgcatct 325  Q
    ||||||||||||||    
T  18485238 gcccctttgcatct 18485251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 222 - 314
Target Start/End: Complemental strand, 25056483 - 25056387
Alignment:
Q  222 tggctaaagtgcactttttccc--ctaactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaattttg-ccccctaagatttagcc 314  Q
    |||||||||||||||||| | |  |||||||||||||||||| |||||||  ||||||||||  |||| |||||||||| |||||||||||||||||    
T  25056483 tggctaaagtgcacttttccactcctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagcc 25056387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 297
Target Start/End: Original strand, 1796052 - 1796131
Alignment:
Q  221 ttggctaaagtgcactttttc--ccctaactttcaaaaacttgtaattttggcc-cctaagtacaaaaattacaattttg 297  Q
    |||||||||||||| |||| |  |||||||||||||||||||| || ||||||| |||||||||||||| ||||||||||    
T  1796052 ttggctaaagtgcatttttccacccctaactttcaaaaacttgcaactttggccacctaagtacaaaaactacaattttg 1796131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 303
Target Start/End: Original strand, 20214194 - 20214278
Alignment:
Q  221 ttggctaaagtgcactttttcccc-taactttcaaaaacttgtaattttggc-ccctaagtacaaaaattacaattttgccccct 303  Q
    ||||||||||||||||||| |||| ||||||||||||||||| |||||| || | ||| ||||||||| |||||||||| |||||    
T  20214194 ttggctaaagtgcacttttcccccttaactttcaaaaacttgcaattttagcactctatgtacaaaaactacaattttggcccct 20214278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 263 - 325
Target Start/End: Complemental strand, 25524157 - 25524093
Alignment:
Q  263 aattttggcc-cctaagtacaaaaattacaattttg-ccccctaagatttagcccctttgcatct 325  Q
    |||||||||| |||||||||||||| || ||||||| ||||||||||||||||||||||||||||    
T  25524157 aattttggcctcctaagtacaaaaactataattttgaccccctaagatttagcccctttgcatct 25524093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 296
Target Start/End: Original strand, 2685749 - 2685820
Alignment:
Q  226 taaagtgcactttttcccctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt 296  Q
    |||| |||||| || ||||||| |||||||||||| ||||||||| |||||||||||||||| |||||||||    
T  2685749 taaaatgcactattccccctaattttcaaaaacttataattttggtcccctaagtacaaaaactacaatttt 2685820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 223 - 322
Target Start/End: Original strand, 21835041 - 21835143
Alignment:
Q  223 ggctaaagtgcactttttccc-ctaactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagccccttt 319  Q
    ||||||||||||||||  ||| |||| ||| ||||| |||| |||||| |||| || ||||||||| |||||||||| |||||||||||||| |||||||    
T  21835041 ggctaaagtgcactttccccctctaagtttgaaaaagttgtgattttgaccccctatgtacaaaaactacaattttgaccccctaagatttaaccccttt 21835140  T
Q  320 gca 322  Q
    |||    
T  21835141 gca 21835143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 226 - 325
Target Start/End: Original strand, 42195137 - 42195238
Alignment:
Q  226 taaagtgcactttttcccct-aactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttgc-cccctaagatttagcccctttgca 322  Q
    |||||||||||||| ||||| |||||| ||||| |||  ||||||||||| || ||||||||  ||||||||||  ||||||||||||||||||||||||    
T  42195137 taaagtgcacttttcccccttaacttt-aaaaagttgcgattttggccccctatgtacaaaatctacaattttggtcccctaagatttagcccctttgca 42195235  T
Q  323 tct 325  Q
    |||    
T  42195236 tct 42195238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 325
Target Start/End: Original strand, 25055406 - 25055518
Alignment:
Q  217 tatattggctaaagtgcactttttcccct--aactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttg-ccccctaagatttag 312  Q
    ||||| ||||||||||||||||| |||||  |||||| ||   |||| |||||||  |||||| ||| ||||| |||||||||| |||||||||||||||    
T  25055406 tatataggctaaagtgcacttttccccctctaactttaaacttcttgcaattttgatcccctatgtataaaaactacaattttggccccctaagatttag 25055505  T
Q  313 cccctttgcatct 325  Q
    ||| |||||||||    
T  25055506 cccatttgcatct 25055518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 315
Target Start/End: Complemental strand, 33160387 - 33160291
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaatttt-ggcccctaagtacaaaaattacaattttg-ccccctaagatttagccc 315  Q
    ||||||||||||||||| ||||  ||| ||||||||||||| |||||| | |||||||||| | ||| |||||||||| |||| |||||||||||||    
T  33160387 ggctaaagtgcacttttccccccttaattttcaaaaacttgcaattttagccccctaagtatagaaactacaattttgaccccttaagatttagccc 33160291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 223 - 297
Target Start/End: Complemental strand, 25524229 - 25524151
Alignment:
Q  223 ggctaaagtgcactttttcccc---taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg 297  Q
    ||||||||||||||||| ||||   ||| ||| ||||| |||||||||||||||| |||||||||||| ||||||||||    
T  25524229 ggctaaagtgcacttttcccccccctaatttttaaaaatttgtaattttggccccctaagtacaaaaactacaattttg 25524151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 218 - 325
Target Start/End: Complemental strand, 42196306 - 42196195
Alignment:
Q  218 atattggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggccc-ctaagtacaaaaattacaatttt-gccccctaagatttagc 313  Q
    |||| ||||||||||||||||  ||||  ||||||| ||||| |||| | |||||||| ||| ||||||||| |||| |||| | |||||||||||||||    
T  42196306 atataggctaaagtgcactttcccccccctaacttttaaaaagttgtgaatttggccctctatgtacaaaaactacatttttagtcccctaagatttagc 42196207  T
Q  314 ccctttgcatct 325  Q
    || |||||||||    
T  42196206 ccatttgcatct 42196195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 271 - 325
Target Start/End: Original strand, 16650043 - 16650098
Alignment:
Q  271 cccctaagtacaaaaattacaattttg-ccccctaagatttagcccctttgcatct 325  Q
    |||||||||||||||| |||||||||| ||| |||||||||| |||||||||||||    
T  16650043 cccctaagtacaaaaactacaattttgaccctctaagatttaacccctttgcatct 16650098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 322
Target Start/End: Original strand, 36485320 - 36485403
Alignment:
Q  241 cccctaactttcaaaaacttgtaattttggcccct-aagtacaaaaattacaattttg-ccccctaagatttagcccctttgca 322  Q
    ||||||||||| ||||||||  ||||||| || || ||||||||||| || ||||||| |||||||||||||| ||||||||||    
T  36485320 cccctaactttaaaaaacttacaattttgacctcttaagtacaaaaactataattttggccccctaagatttaacccctttgca 36485403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 322
Target Start/End: Complemental strand, 20216861 - 20216761
Alignment:
Q  226 taaagtgcactttttcccc--taactttcaaaaacttgtaattttggc-ccctaagtacaaaaattacaatttt-gccccctaagatttagcccctttgc 321  Q
    |||||||||||||| ||||  ||| ||||||||||||| |||||| || |||||  |||||||| ||||||||| |||||| |||| ||||||| |||||    
T  20216861 taaagtgcacttttccccccttaattttcaaaaacttgcaattttagctccctatatacaaaaactacaattttggccccccaagaattagcccatttgc 20216762  T
Q  322 a 322  Q
    |    
T  20216761 a 20216761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 294
Target Start/End: Original strand, 34893686 - 34893739
Alignment:
Q  242 ccctaactttcaaaaacttgtaattttggc-ccctaagtacaaaaattacaatt 294  Q
    |||||||||||||||||||| ||||||||| ||||| ||||||||| |||||||    
T  34893686 ccctaactttcaaaaacttgcaattttggctccctatgtacaaaaactacaatt 34893739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 323
Target Start/End: Complemental strand, 1016949 - 1016861
Alignment:
Q  236 tttttcccctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttgccccctaagatttagcccctttgcat 323  Q
    |||| ||||||| ||| ||||| |||||||||||| |  ||| ||||||||| |||||||||| | ||||||| ||||| |||||||||    
T  1016949 ttttccccctaatttttaaaaaattgtaattttggtcttctatgtacaaaaactacaattttgactcctaagaattagctcctttgcat 1016861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 301
Target Start/End: Original strand, 5730441 - 5730523
Alignment:
Q  223 ggctaaagtgcactttttcccc---taactttcaaaaacttgtaattttggc-ccctaagtacaaaaattacaattttgcccc 301  Q
    ||||||||||||||||| ||||   ||||||||||||||||| |||||||||  ||||||||| ||||  ||||||| |||||    
T  5730441 ggctaaagtgcacttttcccccccttaactttcaaaaacttgcaattttggcttcctaagtaccaaaaccacaatttagcccc 5730523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 322
Target Start/End: Complemental strand, 40255773 - 40255670
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagcccctt 318  Q
    ||||||||||||||||| |||   ||| ||| ||||||||| ||||||| |||| ||| |||| ||| |||||||||| |||||||||||||| |||| |    
T  40255773 ggctaaagtgcacttttcccctcttaatttttaaaaacttgcaattttgaccccctaaatacagaaactacaattttggccccctaagatttaaccccat 40255674  T
Q  319 tgca 322  Q
    ||||    
T  40255673 tgca 40255670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 4e-29; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 223 - 325
Target Start/End: Complemental strand, 12703600 - 12703495
Alignment:
Q  223 ggctaaagtgcactttttccc-ctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagccccttt 319  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||| ||||||||| |||||||| ||||||||||| ||    
T  12703600 ggctaaagtgcactttttccctctaactttcaaaaatttgtaattttggccccctaagtacaaaaactacaattttggccccctatgatttagccccatt 12703501  T
Q  320 gcatct 325  Q
    ||||||    
T  12703500 gcatct 12703495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 223 - 322
Target Start/End: Complemental strand, 29932799 - 29932697
Alignment:
Q  223 ggctaaagtgcactttttcccct--aactttcaaaaacttgtaattttggcccctaagtacaaaaattacaattttg-ccccctaagatttagccccttt 319  Q
    ||||||||||||||||| |||||  |||||||||||||||| |||||||||||||||||||||||| |||||||||| |||| |||||||||| ||||||    
T  29932799 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggcccctaagtacaaaaactacaattttgaccccttaagatttagtcccttt 29932700  T
Q  320 gca 322  Q
    |||    
T  29932699 gca 29932697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 223 - 322
Target Start/End: Complemental strand, 29981953 - 29981851
Alignment:
Q  223 ggctaaagtgcactttttcccct--aactttcaaaaacttgtaattttggcccctaagtacaaaaattacaattttg-ccccctaagatttagccccttt 319  Q
    ||||||||||||||||| |||||  |||||||||||||||| |||||||||||||||||||||||| |||||||||| |||| |||||||||| ||||||    
T  29981953 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggcccctaagtacaaaaactacaattttgaccccttaagatttagtcccttt 29981854  T
Q  320 gca 322  Q
    |||    
T  29981853 gca 29981851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 223 - 325
Target Start/End: Original strand, 12700175 - 12700279
Alignment:
Q  223 ggctaaagtgcactttttcccctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttg-ccccctaagatttagcccctttg 320  Q
    ||||||||||||||||  ||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||| ||||||| ||||||||| | |||    
T  12700175 ggctaaagtgcactttcccccctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttgaccccctatgatttagccacattg 12700274  T
Q  321 catct 325  Q
    |||||    
T  12700275 catct 12700279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 223 - 322
Target Start/End: Complemental strand, 54540891 - 54540788
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccct-aagtacaaaaattacaattttg-ccccctaagatttagcccctt 318  Q
    ||||||||||||||||| ||||  ||||||||||||||||| ||||||| ||||| ||||||||||| |||||||||| |||||||||||||||||||||    
T  54540891 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttggccccctaagatttagcccctt 54540792  T
Q  319 tgca 322  Q
    ||||    
T  54540791 tgca 54540788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 223 - 325
Target Start/End: Original strand, 7758402 - 7758508
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaatttt-gccccctaagatttagcccctt 318  Q
    ||||||||||||||||||||||  ||||||||||||||||| ||||||| |||| |||||||||||| ||||||||| ||||||||||||||| ||||||    
T  7758402 ggctaaagtgcactttttcccccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaatttttgccccctaagatttaacccctt 7758501  T
Q  319 tgcatct 325  Q
    || ||||    
T  7758502 tgtatct 7758508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 219 - 325
Target Start/End: Original strand, 47614181 - 47614291
Alignment:
Q  219 tattggctaaagtgcactttttccc--ctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagcc 314  Q
    |||||||||||||||||||||||||  |||||||||||||||||| |||||||| ||||||||||  ||||  |||||||| ||||||||||||||||||    
T  47614181 tattggctaaagtgcactttttcccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggccccctaagatttagcc 47614280  T
Q  315 cctttgcatct 325  Q
     ||||||||||    
T  47614281 tctttgcatct 47614291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 224 - 314
Target Start/End: Original strand, 8456479 - 8456572
Alignment:
Q  224 gctaaagtgcactttttcccc-taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagcc 314  Q
    ||||||||||||||||||||| ||| ||||||||||||| |||||||| ||||||| |||||||| ||||||||| ||||||||||||||||||    
T  8456479 gctaaagtgcactttttccccctaattttcaaaaacttgcaattttggtcccctaaatacaaaaactacaattttggccccctaagatttagcc 8456572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 322
Target Start/End: Original strand, 29931226 - 29931329
Alignment:
Q  223 ggctaaagtgcactttttc--ccctaactttcaaaaacttgtaa-ttttggcccctaagtacaaaaattacaatttt-gccccctaagatttagcccctt 318  Q
    ||||||||||||||||| |  |||||||||||||||||||| || ||||| ||||||| |||||||| ||||||||| ||||||||||||||| ||||||    
T  29931226 ggctaaagtgcacttttccacccctaactttcaaaaacttgcaatttttgccccctaaatacaaaaactacaattttggccccctaagatttaacccctt 29931325  T
Q  319 tgca 322  Q
    ||||    
T  29931326 tgca 29931329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 322
Target Start/End: Original strand, 29980380 - 29980483
Alignment:
Q  223 ggctaaagtgcactttttc--ccctaactttcaaaaacttgtaa-ttttggcccctaagtacaaaaattacaatttt-gccccctaagatttagcccctt 318  Q
    ||||||||||||||||| |  |||||||||||||||||||| || ||||| ||||||| |||||||| ||||||||| ||||||||||||||| ||||||    
T  29980380 ggctaaagtgcacttttccacccctaactttcaaaaacttgcaatttttgccccctaaatacaaaaactacaattttggccccctaagatttaacccctt 29980479  T
Q  319 tgca 322  Q
    ||||    
T  29980480 tgca 29980483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 223 - 325
Target Start/End: Original strand, 534499 - 534605
Alignment:
Q  223 ggctaaagtgcactttttccc--ctaactttcaaaaacttgtaattttggcc-cctaagtacaaaaattacaatttt-gccccctaagatttagcccctt 318  Q
    |||||||||||||||||||||  |||||| ||||||||||| ||||||| || |||| ||||||||| ||||||||| ||||||||||||||||||  ||    
T  534499 ggctaaagtgcactttttcccctctaactctcaaaaacttgcaattttgacctcctatgtacaaaaactacaattttggccccctaagatttagcctatt 534598  T
Q  319 tgcatct 325  Q
    |||||||    
T  534599 tgcatct 534605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 226 - 314
Target Start/End: Original strand, 7267647 - 7267738
Alignment:
Q  226 taaagtgcactttttcccct-aactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagcc 314  Q
    |||||||||||||| ||||| |||||||||||||||| |||||||| |||||||||||| ||| ||||||||| ||||||||||||||||||    
T  7267647 taaagtgcacttttcccccttaactttcaaaaacttgcaattttggccccctaagtacagaaactacaattttggccccctaagatttagcc 7267738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 218 - 323
Target Start/End: Complemental strand, 22776918 - 22776809
Alignment:
Q  218 atattggctaaagtgcactttttc--ccctaactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagc 313  Q
    |||| ||||||||||||||||| |  |||||||||||| ||| ||| |||||||||||| || ||||||||| |||||||||| |||||||||| |||||    
T  22776918 atataggctaaagtgcacttttccacccctaactttcagaaagttgcaattttggccccctatgtacaaaaactacaattttggccccctaagaattagc 22776819  T
Q  314 ccctttgcat 323  Q
    ||||||||||    
T  22776818 ccctttgcat 22776809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 221 - 322
Target Start/End: Original strand, 51037534 - 51037638
Alignment:
Q  221 ttggctaaagtgcactttt-tcccctaactttcaaaaacttgtaattttggccc-ctaagtacaaaaattacaatttt-gccccctaagatttagcccct 317  Q
    ||||||||||||||||||| |||| ||||||||||||| ||| ||||||| ||| ||| | ||||||| ||||||||| ||||||||||| |||||||||    
T  51037534 ttggctaaagtgcacttttctcccttaactttcaaaaagttgcaattttgaccctctatgaacaaaaactacaattttagccccctaagaattagcccct 51037633  T
Q  318 ttgca 322  Q
    |||||    
T  51037634 ttgca 51037638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 325
Target Start/End: Original strand, 19984849 - 19984955
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttg-ccccctaagatttagcccctt 318  Q
    ||||||||||||||||| ||||  ||| ||||||||||||| |||||||| |||||| ||||||||| |||||||||| |||  ||||||||| ||||||    
T  19984849 ggctaaagtgcacttttccccccctaagtttcaaaaacttgcaattttggccccctatgtacaaaaactacaattttgaccctttaagatttaacccctt 19984948  T
Q  319 tgcatct 325  Q
    |||||||    
T  19984949 tgcatct 19984955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 227 - 321
Target Start/End: Original strand, 24516464 - 24516562
Alignment:
Q  227 aaagtgcactttttcccc--taactttcaaaaacttgtaattttggc-ccctaagtacaaaaattacaatttt-gccccctaagatttagcccctttgc 321  Q
    ||||||||||||||||||  ||||||| ||||||||| ||||||||| ||||||||| ||||| ||||||||| ||||| ||||||||||| |||||||    
T  24516464 aaagtgcactttttcccccctaactttaaaaaacttgcaattttggcaccctaagtataaaaactacaattttggccccttaagatttagctcctttgc 24516562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 217 - 322
Target Start/End: Original strand, 51469966 - 51470075
Alignment:
Q  217 tatattggctaaagtgcactttttcc--cctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattt-tgccccctaagatttag 312  Q
    ||||||||||||||||||||||| ||  ||||| ||||||||||||| |||||||| ||||||||||| ||||  |||||||   |||||||||||||||    
T  51469966 tatattggctaaagtgcacttttccctccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttaacccccctaagatttag 51470065  T
Q  313 cccctttgca 322  Q
    |||| |||||    
T  51470066 ccccattgca 51470075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 221 - 322
Target Start/End: Complemental strand, 52840707 - 52840602
Alignment:
Q  221 ttggctaaagtgcactttt--tcccctaactttcaaaaacttgtaattttggc-ccctaagtacaaaaattacaattttg-ccccctaagatttagcccc 316  Q
    ||||||||||||| |||||  |||||||||||||||||||||| ||||||||| |||||| ||  ||||  ||||||||| |||||||||||||||||||    
T  52840707 ttggctaaagtgcccttttcctcccctaactttcaaaaacttgcaattttggctccctaattatcaaaacaacaattttgtccccctaagatttagcccc 52840608  T
Q  317 tttgca 322  Q
     |||||    
T  52840607 attgca 52840602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 226 - 322
Target Start/End: Complemental strand, 47610678 - 47610578
Alignment:
Q  226 taaagtgcactttttcccct--aactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttg-ccccctaagatttagcccctttgc 321  Q
    |||||||||||||| |||||  |||||||||||||||| |||||||| ||||||||||| ||||  ||||||| | ||||||||||||||||||| ||||    
T  47610678 taaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagccccattgc 47610579  T
Q  322 a 322  Q
    |    
T  47610578 a 47610578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 226 - 322
Target Start/End: Complemental strand, 7268924 - 7268825
Alignment:
Q  226 taaagtgcactttttcccc-taactttcaaaaacttgtaattttggcc-cctaagtacaaaaattacaatttt-gccccctaagatttagcccctttgca 322  Q
    |||||||||||||| |||| ||||||||||||||||| |||||||||| |||||||| | ||| ||||||||| ||| |||||||||||| ||| |||||    
T  7268924 taaagtgcacttttcccccctaactttcaaaaacttgcaattttggcctcctaagtatagaaactacaattttggcctcctaagatttagtcccattgca 7268825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 245 - 322
Target Start/End: Complemental strand, 55192072 - 55191993
Alignment:
Q  245 taactttcaaaaacttgtaattttggccc-ctaagtacaaaaattacaattttgccccct-aagatttagcccctttgca 322  Q
    ||||||||||||||||| ||||||||||| ||||||||||||| |||||||||| ||||| |||| ||| ||||||||||    
T  55192072 taactttcaaaaacttgcaattttggccctctaagtacaaaaactacaattttggcccctcaagaattaacccctttgca 55191993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 223 - 325
Target Start/End: Complemental strand, 11671441 - 11671336
Alignment:
Q  223 ggctaaagtgcactttttcc-cctaactttcaaaaacttgtaatttt-ggcccctaagtacaaaaattaca-attttgccccctaagatttagccccttt 319  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||| | ||||||| || ||||| |||| ||||  ||||||| |||||| |||||||    
T  11671441 ggctaaagtgcactttttccgcctaactttcaaaaacttgcaattttagccccctaaatataaaaactacagatttgaccccctatgatttaaccccttt 11671342  T
Q  320 gcatct 325  Q
     |||||    
T  11671341 acatct 11671336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 226 - 325
Target Start/End: Original strand, 52104484 - 52104583
Alignment:
Q  226 taaagtgcactttttcccctaactttcaaaaacttgtaattttggcccctaagtacaaaaattacaatttt-gccccctaagatttagcccctttgcatc 324  Q
    |||| ||||||||| ||||||||||||||||| ||||||||||||  |||| ||||||||| || |||||| ||| ||||||||||| | | ||||||||    
T  52104484 taaaatgcacttttccccctaactttcaaaaagttgtaattttgg-tcctatgtacaaaaactataattttggccacctaagatttaactcatttgcatc 52104582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 325
Target Start/End: Complemental strand, 19986173 - 19986065
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcc---cctaagtacaaaaattacaattttg-ccccctaagatttagcccc 316  Q
    ||||||||||||||||| |||   ||| ||||||||||||| ||||||||||   |||| ||| ||||| |||||||||| ||| |||||||||| ||||    
T  19986173 ggctaaagtgcacttttcccctcttaagtttcaaaaacttgcaattttggcccctcctatgtataaaaactacaattttgaccctctaagatttaacccc 19986074  T
Q  317 tttgcatct 325  Q
    |||||||||    
T  19986073 tttgcatct 19986065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 321
Target Start/End: Complemental strand, 5029783 - 5029682
Alignment:
Q  223 ggctaaagtgcactttt-tcccctaactttcaaaaacttgtaattttggcc-cctaagtacaaaaattacaa-ttttgccccctaagatttagccccttt 319  Q
    |||||||||||||||||  |||||| ||||||||| |||| |||||||||| ||||||||| ||||  |||| |||| |||||||||| |||||||| ||    
T  5029783 ggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggcctcctaagtaccaaaaccacaatttttcccccctaagaattagccccatt 5029684  T
Q  320 gc 321  Q
    ||    
T  5029683 gc 5029682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 323
Target Start/End: Complemental strand, 46721321 - 46721217
Alignment:
Q  223 ggctaaagtgcacttttt--cccctaactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaatttt-gccccctaagatttagcccctt 318  Q
    |||||||||||||||||   ||||||||||| ||||| |||  |||||  |||| || ||||||||| ||||||||| | ||||||||||||||||||||    
T  46721321 ggctaaagtgcacttttctccccctaacttttaaaaagttgcgattttaaccccctatgtacaaaaactacaattttagtcccctaagatttagcccctt 46721222  T
Q  319 tgcat 323  Q
    |||||    
T  46721221 tgcat 46721217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 325
Target Start/End: Complemental strand, 54987103 - 54987002
Alignment:
Q  226 taaagtgcactttttcccctaactttcaaaaacttgtaatttt-ggcccctaagtacaaaaattacaattttg-ccccctaagatttagcccctttgcat 323  Q
    |||||||||||||| ||||||| ||||||||| |||  ||||| | |||||| ||| ||||| || ||||||| ||| |||||||||||| |||||||||    
T  54987103 taaagtgcacttttccccctaagtttcaaaaagttgcgattttagtcccctatgtataaaaactataattttgaccctctaagatttagctcctttgcat 54987004  T
Q  324 ct 325  Q
    ||    
T  54987003 ct 54987002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 223 - 322
Target Start/End: Original strand, 47609697 - 47609800
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaattt-tgccccctaagatttagcccctt 318  Q
    ||||||| ||||||||| ||||  ||||||||||||||||| |||||||  ||||||||||| ||||  |||||||   ||||||||||||||||||| |    
T  47609697 ggctaaaatgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttaacccccctaagatttagccccat 47609796  T
Q  319 tgca 322  Q
    ||||    
T  47609797 tgca 47609800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 223 - 322
Target Start/End: Original strand, 54539755 - 54539858
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaatttt-ggcccctaagtacaaaaattacaattttg-ccccctaagatttagcccctt 318  Q
    ||||||||||||||||| | ||  ||||||||||||||||| ||||||   ||||||| |||||||| ||||||||||  ||||||||||||||| | ||    
T  54539755 ggctaaagtgcacttttccacccttaactttcaaaaacttgcaattttaaccccctaaatacaaaaactacaattttgatcccctaagatttagctcatt 54539854  T
Q  319 tgca 322  Q
    ||||    
T  54539855 tgca 54539858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 315
Target Start/End: Complemental strand, 535885 - 535787
Alignment:
Q  221 ttggctaaagtgcactttttc--ccctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagccc 315  Q
    |||||||||||| |||||| |  |||||||||||||||||||| |||||||| ||| ||||||  |||| || ||||||  ||||||||||||||||||    
T  535885 ttggctaaagtgtacttttccacccctaactttcaaaaacttgcaattttggtcccttaagtattaaaactataattttcaccccctaagatttagccc 535787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 248 - 325
Target Start/End: Original strand, 31645000 - 31645079
Alignment:
Q  248 ctttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttgccc-cctaagatttagcccctttgcatct 325  Q
    |||||||||||||  |||||||||||| ||||| |||||| |||||||||  || ||||||||||||||| |||||||||    
T  31645000 ctttcaaaaacttacaattttggccccctaagtgcaaaaactacaattttaacctcctaagatttagcccatttgcatct 31645079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 274
Target Start/End: Complemental strand, 47615649 - 47615596
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc 274  Q
    ||||||||||||||||| ||||  ||||||||||||||||| ||||||||||||    
T  47615649 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggcccc 47615596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 322
Target Start/End: Complemental strand, 51470555 - 51470453
Alignment:
Q  223 ggctaaagtgcactttttcccc-taactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaattttgc-cccctaagatttagccccttt 319  Q
    |||||||||||||| || |||| ||||||||||||||||| ||||| |  ||||||||||| ||||  ||||||| || ||||||||||||||| || ||    
T  51470555 ggctaaagtgcactcttcccccctaactttcaaaaacttgcaatttagatcccctaagtaccaaaaccacaatttagcacccctaagatttagctccatt 51470456  T
Q  320 gca 322  Q
    |||    
T  51470455 gca 51470453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 302
Target Start/End: Complemental strand, 53901489 - 53901407
Alignment:
Q  221 ttggctaaagtgcactttttcccctaactttcaaaaacttgtaattttggc-ccctaagtacaaaaattacaattttgccccc 302  Q
    ||||||||||||||||||| ||||||| ||| ||||| ||| ||||||| | || |||||||||||| |||||| ||| ||||    
T  53901489 ttggctaaagtgcacttttccccctaagtttaaaaaagttgcaattttgactccttaagtacaaaaactacaatgttggcccc 53901407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 325
Target Start/End: Complemental strand, 34019241 - 34019140
Alignment:
Q  226 taaagtgcactttttcccctaactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaatttt-gccccctaagatttagcccctttgcat 323  Q
    |||||| || |||| ||| ||||||||||||||||| |||||||  |||||| ||||||| | ||||||||| | ||||||| ||||||| | |||||||    
T  34019241 taaagtacatttttccccttaactttcaaaaacttgcaattttgaccccctaggtacaaacactacaattttggtcccctaaaatttagctcatttgcat 34019142  T
Q  324 ct 325  Q
    ||    
T  34019141 ct 34019140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 221 - 325
Target Start/End: Original strand, 49216245 - 49216353
Alignment:
Q  221 ttggctaaagtgcactttt--tcccctaactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaattttg-ccccctaagatttagcccc 316  Q
    |||||||||||||||||||   | ||||| ||||||||| ||| |||||||  |||||| ||||||||| ||||||| || |||| ||||||||||| |     
T  49216245 ttggctaaagtgcacttttccacgcctaagtttcaaaaagttgcaattttgaccccctatgtacaaaaactacaattatgtccccttaagatttagctca 49216344  T
Q  317 tttgcatct 325  Q
    |||||||||    
T  49216345 tttgcatct 49216353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 295
Target Start/End: Original strand, 5001200 - 5001275
Alignment:
Q  223 ggctaaagtgcactttt--tcccctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattt 295  Q
    |||||||||||||||||  ||||||| ||||||||| |||| |||||||| ||||||||||| ||||  |||||||    
T  5001200 ggctaaagtgcacttttcctcccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattt 5001275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 296
Target Start/End: Original strand, 6170296 - 6170348
Alignment:
Q  245 taactttcaaaaacttgtaattttggcccct-aagtacaaaaattacaatttt 296  Q
    ||||||||||||||||| |||||||  |||| |||||||||||||||||||||    
T  6170296 taactttcaaaaacttgcaattttgatcccttaagtacaaaaattacaatttt 6170348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 322
Target Start/End: Complemental strand, 10584078 - 10584038
Alignment:
Q  282 aaaaattacaattttgccccctaagatttagcccctttgca 322  Q
    |||||||| ||||| ||||||||||||||||||||||||||    
T  10584078 aaaaattaaaatttggccccctaagatttagcccctttgca 10584038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 325
Target Start/End: Complemental strand, 23770450 - 23770402
Alignment:
Q  278 gtacaaaaattacaatttt-gccccctaagatttagcccctttgcatct 325  Q
    ||||||||| ||||||||| ||||||||||||||| |||||||||||||    
T  23770450 gtacaaaaactacaattttagccccctaagatttaacccctttgcatct 23770402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 322
Target Start/End: Original strand, 52839037 - 52839140
Alignment:
Q  223 ggctaaagtgcactttttcccct--aactttcaaaaacttgtaattttggccc-ctaagtacaaaaattacaattttgcccc-ctaagatttagcccctt 318  Q
    |||||||||||| |||| |||||  ||||| |||||| ||||||||||| ||| |||||||| ||||  |||||||| |||| |||| |||||||||| |    
T  52839037 ggctaaagtgcaattttccccctctaacttccaaaaatttgtaattttgaccctctaagtaccaaaacaacaattttacccctctaaaatttagccccat 52839136  T
Q  319 tgca 322  Q
    ||||    
T  52839137 tgca 52839140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 323
Target Start/End: Original strand, 46719940 - 46720045
Alignment:
Q  222 tggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaatttt-gccccctaagatttagcccct 317  Q
    ||||||||||||| |||| ||||  ||||||| ||||| |||  ||||||||||| || ||| ||||| ||||||||| | || |||||||||||||| |    
T  46719940 tggctaaagtgcatttttccccccttaacttttaaaaagttgcgattttggccccctatgtataaaaactacaattttagtcctctaagatttagcccat 46720039  T
Q  318 ttgcat 323  Q
    ||||||    
T  46720040 ttgcat 46720045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 244 - 311
Target Start/End: Complemental strand, 6171319 - 6171251
Alignment:
Q  244 ctaactttcaaaaacttgtaattttggcccctaagtacaaaaattacaattttg-ccccctaagattta 311  Q
    |||| ||| ||||| |||| ||||||||||||| ||||||||| || ||||||| ||| ||||||||||    
T  6171319 ctaagttttaaaaaattgtgattttggcccctatgtacaaaaactataattttgaccctctaagattta 6171251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 312
Target Start/End: Original strand, 6249633 - 6249701
Alignment:
Q  245 taactttcaaaaacttgtaattttggcccct-aagtacaaaaattacaattttgccccctaagatttag 312  Q
    ||||||||||||||||| ||||||   |||| ||||||||||| |||||||||  ||| ||||||||||    
T  6249633 taactttcaaaaacttgcaattttaatcccttaagtacaaaaactacaattttatcccttaagatttag 6249701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 320
Target Start/End: Complemental strand, 40426877 - 40426778
Alignment:
Q  226 taaagtgcactttttcccc--taactttcaaaaacttgtaatttt-ggcccctaag-tacaaaaattacaatttt-gccccctaagatttagcccctttg 320  Q
    |||||||||||||| ||||  ||||||| ||||| ||| || ||| ||||||| |  |||||||||||||||||| |||||||| |||||||| ||||||    
T  40426877 taaagtgcacttttccccccttaactttaaaaaagttgcaaatttcggccccttatatacaaaaattacaattttggccccctatgatttagctcctttg 40426778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 325
Target Start/End: Complemental strand, 47615600 - 47615572
Alignment:
Q  297 gccccctaagatttagcccctttgcatct 325  Q
    |||||||||||||||||||||||||||||    
T  47615600 gccccctaagatttagcccctttgcatct 47615572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 2e-28; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 221 - 325
Target Start/End: Original strand, 7314878 - 7314985
Alignment:
Q  221 ttggctaaagtgcactttttcccct--aactttcaaaaacttgtaattttggcccctaagtacaaaaattacaattttg-ccccctaagatttagcccct 317  Q
    ||||||||||||||||||| |||||  |||||||||||||||| ||||||||||||||||||  ||||  ||||||||| ||||||||||||||||||||    
T  7314878 ttggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggcccctaagtatcaaaacaacaattttgaccccctaagatttagcccct 7314977  T
Q  318 ttgcatct 325  Q
    ||||||||    
T  7314978 ttgcatct 7314985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 221 - 325
Target Start/End: Complemental strand, 1829706 - 1829598
Alignment:
Q  221 ttggctaaagtgcacttttt--cccctaactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagcccc 316  Q
    |||| |||||||||||||||  ||||||||||| ||||||||| ||||||| |||| |||||| ||||| |||||||||| |||||||||||||||||||    
T  1829706 ttggttaaagtgcacttttttccccctaacttttaaaaacttgcaattttgaccccctaagtataaaaactacaattttggccccctaagatttagcccc 1829607  T
Q  317 tttgcatct 325  Q
    |||||||||    
T  1829606 tttgcatct 1829598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 221 - 318
Target Start/End: Original strand, 16703568 - 16703666
Alignment:
Q  221 ttggctaaagtgcactttttcccctaactttcaaaaacttgtaattttggcccctaagtacaaaaattacaatttt-gccccctaagatttagcccctt 318  Q
    ||||||||||||||||||| |||||| |||||||||||||| |||||||  || ||| |||||||| ||||||||| ||||||||| ||||| ||||||    
T  16703568 ttggctaaagtgcacttttccccctatctttcaaaaacttgcaattttgatccataaatacaaaaactacaattttagccccctaaaatttaacccctt 16703666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 221 - 322
Target Start/End: Complemental strand, 30495799 - 30495695
Alignment:
Q  221 ttggctaaagtgcactttttcccctaactttcaaaaacttgtaatttt-ggcccctaagtacaaaaattacaattttg--ccccctaagatttagcccct 317  Q
    ||||||||||||||||||||||||||||||||||||| |||  |||||   |||||| |||||||||| |||||||||  ||| |||||||||||||| |    
T  30495799 ttggctaaagtgcactttttcccctaactttcaaaaagttgcgattttaatcccctatgtacaaaaataacaattttggcccctctaagatttagcccat 30495700  T
Q  318 ttgca 322  Q
    |||||    
T  30495699 ttgca 30495695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 223 - 322
Target Start/End: Original strand, 8659265 - 8659368
Alignment:
Q  223 ggctaaagtgcactttttcccct--aactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttg-ccccctaagatttagcccctt 318  Q
    ||||||||||||||||| |||||  |||||||||||||||| |||||||| ||||||||||| ||||  ||||||| | ||||||||||||||||||| |    
T  8659265 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagccccat 8659364  T
Q  319 tgca 322  Q
    ||||    
T  8659365 tgca 8659368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 322
Target Start/End: Complemental strand, 8660304 - 8660202
Alignment:
Q  223 ggctaaagtgcactttttccc--ctaactttcaaaaacttgtaattttggcccctaagtacaaaaattacaattttg-ccccctaagatttagccccttt 319  Q
    ||||||||||||||||| |||  |||||||||||||||||| ||||||| ||||||||||| ||||  ||||||| | |||||||||||||||| || ||    
T  8660304 ggctaaagtgcacttttcccctcctaactttcaaaaacttgcaattttgacccctaagtaccaaaaccacaatttagcccccctaagatttagctccatt 8660205  T
Q  320 gca 322  Q
    |||    
T  8660204 gca 8660202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 223 - 322
Target Start/End: Original strand, 8821873 - 8821976
Alignment:
Q  223 ggctaaagtgcactttttcccct--aactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttg-ccccctaagatttagcccctt 318  Q
    ||||||||||||||||| |||||  |||||||||||||||| |||||||| ||||||||||| ||||  ||||||| | |||||||||||||||| || |    
T  8821873 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagctccat 8821972  T
Q  319 tgca 322  Q
    ||||    
T  8821973 tgca 8821976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 223 - 322
Target Start/End: Complemental strand, 16704598 - 16704495
Alignment:
Q  223 ggctaaagtgcactttt--tcccctaactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagcccctt 318  Q
    |||||||||||||||||  |||| ||||||||||||||||| ||||||| |||| |||||||||||| ||||||||||  ||  |||||||||||| |||    
T  16704598 ggctaaagtgcacttttcctcccttaactttcaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgatcctttaagatttagcctctt 16704499  T
Q  319 tgca 322  Q
    ||||    
T  16704498 tgca 16704495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 223 - 325
Target Start/End: Complemental strand, 7316395 - 7316289
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttgccccct-aagatttagcccctt 318  Q
    ||||||||||||||||| ||||  ||||||||||||||||| |||||||||||| ||| ||   |||  ||||||||| ||||| |||||||||||||||    
T  7316395 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaaatattgaaaccacaattttggccccttaagatttagcccctt 7316296  T
Q  319 tgcatct 325  Q
    |||||||    
T  7316295 tgcatct 7316289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 223 - 322
Target Start/End: Original strand, 10784592 - 10784696
Alignment:
Q  223 ggctaaagtgcactttt---tcccctaactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagcccct 317  Q
    |||||||||||||||||   |||| ||||||| ||||||||| ||||||  |||| |||||| ||||| |||||||||| ||||| ||||||||||||||    
T  10784592 ggctaaagtgcacttttccctcccttaacttttaaaaacttgcaattttaaccccctaagtataaaaactacaattttggcccccaaagatttagcccct 10784691  T
Q  318 ttgca 322  Q
    |||||    
T  10784692 ttgca 10784696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 226 - 322
Target Start/End: Complemental strand, 26575150 - 26575052
Alignment:
Q  226 taaagtgcactttttcccctaactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaatttt-gccccctaagatttagcccctttgca 322  Q
    |||||||||||||   | |||||||||||||||||| ||||||  |||| |||||||||||| ||||||||| ||||||||||||||| | ||||||||    
T  26575150 taaagtgcactttcctctctaactttcaaaaacttgcaattttaaccccttaagtacaaaaactacaattttggccccctaagatttaactcctttgca 26575052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 219 - 315
Target Start/End: Complemental strand, 8822898 - 8822798
Alignment:
Q  219 tattggctaaagtgcactttttcccct--aactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaattttg-ccccctaagatttagcc 314  Q
    ||||||||||||||||||||| || ||  |||||||||||||||| |||||||  ||||||||||| ||||  ||||||| | |||||||||||||||||    
T  8822898 tattggctaaagtgcacttttccctctttaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatttagcc 8822799  T
Q  315 c 315  Q
    |    
T  8822798 c 8822798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 223 - 321
Target Start/End: Complemental strand, 27322168 - 27322067
Alignment:
Q  223 ggctaaagtgcactttttcccc-taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagccccttt 319  Q
    ||||||||||||||||| |||| || ||||||||| |||| |||||||| ||||||||||| ||||  ||||||||  |||||||||| |||||||||||    
T  27322168 ggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaattttccccccctaagaattagccccttt 27322069  T
Q  320 gc 321  Q
    ||    
T  27322068 gc 27322067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 223 - 322
Target Start/End: Original strand, 3721612 - 3721715
Alignment:
Q  223 ggctaaagtgcactttttcccct--aactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaattttg-ccccctaagatttagcccctt 318  Q
    ||||||||||||||||| |||||  |||||||||||||||| |||||||  ||||||||||| ||||  | ||||| | |||| |||||||||||||| |    
T  3721612 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccataatttagaccccttaagatttagccccat 3721711  T
Q  319 tgca 322  Q
    ||||    
T  3721712 tgca 3721715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 223 - 312
Target Start/End: Complemental strand, 14823677 - 14823583
Alignment:
Q  223 ggctaaagtgcacttttt---cccctaactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaatttt-gccccctaagatttag 312  Q
    ||||||||||||||||||   ||| ||| ||| ||||||||| |||||| ||||| |||||||| ||| ||||||||| ||||||||||||||||    
T  14823677 ggctaaagtgcacttttttcccccttaattttaaaaaacttgcaattttagccccttaagtacagaaactacaattttggccccctaagatttag 14823583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 241 - 325
Target Start/End: Original strand, 17496817 - 17496904
Alignment:
Q  241 cccctaactttcaaaaacttgtaattttggccc-ctaagtacaaaaattacaattttg--ccccctaagatttagcccctttgcatct 325  Q
    ||||||||||||||||||||  ||||||  ||| ||||||||||||| | ||||||||  |||||||||||||| || ||||||||||    
T  17496817 cccctaactttcaaaaacttacaattttaaccctctaagtacaaaaactgcaattttggcccccctaagatttaacctctttgcatct 17496904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 322
Target Start/End: Complemental strand, 10785994 - 10785911
Alignment:
Q  241 cccctaactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaatttt-gccccctaagatttagcccctttgca 322  Q
    ||||||||||| ||||| ||| ||||||  |||| |||||||||||| |||||||||  |||| ||||||||||||||||||||    
T  10785994 cccctaacttttaaaaatttgcaattttaaccccctaagtacaaaaactacaattttaaccccttaagatttagcccctttgca 10785911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 320
Target Start/End: Original strand, 12350823 - 12350898
Alignment:
Q  246 aactttcaaaaacttgtaattttggcccctaagtacaaaaattacaattttg-ccccctaagatttagcccctttg 320  Q
    |||||| | ||||||| ||||||| |||||| ||| ||||| |||||||||  |||||||||||||||||||||||    
T  12350823 aactttaataaacttgcaattttgacccctatgtataaaaactacaattttaaccccctaagatttagcccctttg 12350898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 322
Target Start/End: Original strand, 26574642 - 26574721
Alignment:
Q  244 ctaactttcaaaaacttgtaattttggccc-ctaagtacaaaaattacaattttgccccctaagatttagcccctttgca 322  Q
    |||||||||||||||||| |||||||  || ||||||||||||| |||| |||   ||| ||||||||||||||||||||    
T  26574642 ctaactttcaaaaacttgcaattttgaacctctaagtacaaaaactacattttgatcccttaagatttagcccctttgca 26574721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 322
Target Start/End: Original strand, 27437828 - 27437931
Alignment:
Q  223 ggctaaagtgcactttt-tcccct-aactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagcccctt 318  Q
    ||||||||||||||||| |||||| |||||| ||||| ||| |||||||||||| ||   | ||||| |||||||||| |||||||||||||||| ||||    
T  27437828 ggctaaagtgcacttttctccccttaactttaaaaaagttgcaattttggccccctataaataaaaactacaattttgaccccctaagatttagctcctt 27437927  T
Q  319 tgca 322  Q
    ||||    
T  27437928 tgca 27437931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 301
Target Start/End: Complemental strand, 3722608 - 3722527
Alignment:
Q  223 ggctaaagtgcactttttcc--cctaactttcaaaaacttgtaattttggccc-ctaagtacaaaaattacaattttgcccc 301  Q
    ||||||||||||||||| ||  ||||||||||||||||||| ||||||| ||| |||||||| ||||  ||||||| |||||    
T  3722608 ggctaaagtgcacttttccctccctaactttcaaaaacttgcaattttgaccctctaagtaccaaaaccacaatttagcccc 3722527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 312
Target Start/End: Original strand, 14822360 - 14822453
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaatttt-gccccctaagatttag 312  Q
    ||||| |||||||||||  |||  ||| ||||||||||||| |||||||||||| |||||| | ||| ||||||||| ||||||||||||||||    
T  14822360 ggctagagtgcacttttcaccccttaattttcaaaaacttgcaattttggccccataagtatagaaactacaattttggccccctaagatttag 14822453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 322
Target Start/End: Complemental strand, 22418950 - 22418893
Alignment:
Q  265 ttttggcccctaagtacaaaaattacaattttgccccctaagatttagcccctttgca 322  Q
    ||||| |||||||  | |||||| | ||||||||||||||||||||||||||||||||    
T  22418950 ttttgtcccctaataaaaaaaatgaaaattttgccccctaagatttagcccctttgca 22418893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 321
Target Start/End: Original strand, 27318315 - 27318418
Alignment:
Q  223 ggctaaagtgcactttttcccc-taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattt---tgccccctaagatttagcccct 317  Q
    ||||||||||||| |||||||| || ||||||||| |||| |||||||| ||||||||||| ||||  |||||||     |||||||||| |||||||||    
T  27318315 ggctaaagtgcaccttttccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaaccacaatttcccccccccctaagaattagcccct 27318414  T
Q  318 ttgc 321  Q
    ||||    
T  27318415 ttgc 27318418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 322
Target Start/End: Complemental strand, 34834677 - 34834577
Alignment:
Q  226 taaagtgcactttttcc--cctaactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaattttg-ccccctaagatttagcccctttgc 321  Q
    |||||||||||||| ||  ||||||||||||||||||| |||||||  | ||||||||  ||||  ||||||| | ||||||||||||||||||| ||||    
T  34834677 taaagtgcacttttccctccctaactttcaaaaacttgcaattttgatctcctaagtatcaaaaccacaatttagcccccctaagatttagccccattgc 34834578  T
Q  322 a 322  Q
    |    
T  34834577 a 34834577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 325
Target Start/End: Original strand, 6840194 - 6840298
Alignment:
Q  223 ggctaaagtgcactttttcccctaactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagcccctttg 320  Q
    |||| |||||||||||  ||| ||| ||||||||| |||  ||||||||||| ||| |||||||| || ||||||| ||| ||||||||||  |||||||    
T  6840194 ggctgaagtgcactttcccccttaagtttcaaaaagttgcgattttggccccttaaatacaaaaactataattttgaccctctaagatttaatccctttg 6840293  T
Q  321 catct 325  Q
    |||||    
T  6840294 catct 6840298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 325
Target Start/End: Complemental strand, 26949268 - 26949180
Alignment:
Q  236 tttttcccctaactttcaaaaacttgtaattttggcccctaagtacaaaaattacaatttt-gccccctaagatttagcccctttgcatct 325  Q
    |||||||| ||||||||||||| ||| ||||||| |||||||||| ||||| |||||||||   |  |||||||||| |||||||||||||    
T  26949268 tttttcccttaactttcaaaaa-ttgcaattttg-cccctaagtataaaaactacaattttaatcttctaagatttaacccctttgcatct 26949180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 296
Target Start/End: Complemental strand, 6842384 - 6842308
Alignment:
Q  223 ggctaaagtgcactttttcccct--aactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt 296  Q
    ||||||||||||||||| |||||  || ||||||||| ||| |||||||| |||||| || |||||| |||||||||    
T  6842384 ggctaaagtgcacttttccccctctaagtttcaaaaagttgcaattttggccccctatgtgcaaaaactacaatttt 6842308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 223 - 322
Target Start/End: Complemental strand, 3333127 - 3333024
Alignment:
Q  223 ggctaaagtgcactttttccc--ctaactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttgcccc-ctaagatttagcccctt 318  Q
    ||||||| ||||||||| |||  |||| ||| ||||| |||  ||||||||||| || ||||||||| |||||||||  ||| |||| ||||||||||||    
T  3333127 ggctaaattgcacttttccccttctaagtttgaaaaagttgcgattttggccccctatgtacaaaaactacaattttaaccctctaaaatttagcccctt 3333028  T
Q  319 tgca 322  Q
    ||||    
T  3333027 tgca 3333024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 6e-28; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 217 - 325
Target Start/End: Original strand, 5513976 - 5514087
Alignment:
Q  217 tatattggctaaagtgcactttttcccc-taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagc 313  Q
    ||||| ||||||||||||||||| |||| ||||||||||||||||  |||||||||||| |||||||||||| |||||||||| |||||||| |||||||    
T  5513976 tatataggctaaagtgcacttttaccccctaactttcaaaaacttccaattttggccccctaagtacaaaaactacaattttgcccccctaaaatttagc 5514075  T
Q  314 ccctttgcatct 325  Q
    ||||||||||||    
T  5514076 ccctttgcatct 5514087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 220 - 325
Target Start/End: Original strand, 10006341 - 10006450
Alignment:
Q  220 attggctaaagtgcactttttcccct--aactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagccc 315  Q
    |||||||||||||||||||| |||||  |||||||||||||||| |||||||||||| ||||||  ||||  ||||||||| ||||||||||||||||||    
T  10006341 attggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggccccctaagatttagccc 10006440  T
Q  316 ctttgcatct 325  Q
    ||||||||||    
T  10006441 ctttgcatct 10006450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 325
Target Start/End: Complemental strand, 32207424 - 32207320
Alignment:
Q  223 ggctaaagtgcactttttcccctaactttcaaaaacttgtaattttggc-ccctaagtacaaaaattacaatttt-gccccctaagatttagcccctttg 320  Q
    ||||||||||||||||  |||||||| |||||||||||| ||||||| | ||||||||||||||| ||||||||| ||| | |||||||||||| |||||    
T  32207424 ggctaaagtgcactttcccccctaaccttcaaaaacttgcaattttgacgccctaagtacaaaaactacaattttggcctcttaagatttagcctctttg 32207325  T
Q  321 catct 325  Q
    |||||    
T  32207324 catct 32207320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 244 - 325
Target Start/End: Complemental strand, 1824156 - 1824073
Alignment:
Q  244 ctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagcccctttgcatct 325  Q
    |||||||||||||||||| |||||||| |||||||||||||||| ||||||||| ||||||||||||||||||  |||||||||    
T  1824156 ctaactttcaaaaacttgcaattttggtcccctaagtacaaaaactacaattttggccccctaagatttagccattttgcatct 1824073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 244 - 325
Target Start/End: Complemental strand, 1858601 - 1858518
Alignment:
Q  244 ctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagcccctttgcatct 325  Q
    |||||||||||||||||| |||||||| |||||||||||||||| ||||||||| ||||||||||||||||||  |||||||||    
T  1858601 ctaactttcaaaaacttgcaattttggtcccctaagtacaaaaactacaattttggccccctaagatttagccattttgcatct 1858518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 223 - 325
Target Start/End: Complemental strand, 10007864 - 10007758
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttgc-cccctaagatttagcccctt 318  Q
    ||||||||||||||||| ||||  ||||||||||||||||| |||||||||||| |||||| | |||  |||||||||  ||||||||||||||||||||    
T  10007864 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtatagaaaccacaattttggtcccctaagatttagcccctt 10007765  T
Q  319 tgcatct 325  Q
    |||||||    
T  10007764 tgcatct 10007758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 223 - 325
Target Start/End: Complemental strand, 22221465 - 22221359
Alignment:
Q  223 ggctaaagtgcactttttc--ccctaactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaattttg-ccccctaagatttagcccctt 318  Q
    ||||||||||||||||| |  |||||||||||||||||||| |||||||  ||||||||||  |||| |||||||||| |||||||||||||||||||||    
T  22221465 ggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagcccctt 22221366  T
Q  319 tgcatct 325  Q
    | |||||    
T  22221365 tacatct 22221359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 223 - 325
Target Start/End: Complemental strand, 22227807 - 22227701
Alignment:
Q  223 ggctaaagtgcactttttc--ccctaactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaattttg-ccccctaagatttagcccctt 318  Q
    ||||||||||||||||| |  |||||||||||||||||||| |||||||  ||||||||||  |||| |||||||||| |||||||||||||||||||||    
T  22227807 ggctaaagtgcacttttccacccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagcccctt 22227708  T
Q  319 tgcatct 325  Q
    | |||||    
T  22227707 tacatct 22227701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 223 - 325
Target Start/End: Original strand, 30335639 - 30335745
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggccc-ctaagtacaaaaattacaattttg-ccccctaagatttagcccctt 318  Q
    |||||||||||| |||| | ||  ||||||| ||||||||| ||||||||| | |||||||||||||||||||||||  |||||||||||||||||||||    
T  30335639 ggctaaagtgcatttttccacccttaacttttaaaaacttgcaattttggctcgctaagtacaaaaattacaattttaaccccctaagatttagcccctt 30335738  T
Q  319 tgcatct 325  Q
    |||||||    
T  30335739 tgcatct 30335745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 223 - 322
Target Start/End: Complemental strand, 12353460 - 12353359
Alignment:
Q  223 ggctaaagtgcactttttcccct-aactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagccccttt 319  Q
    ||||||||||||||||| ||||| |||||||||||||||| |||||||| ||||||||||| |||| || |||||| |||||||||||||||||||| ||    
T  12353460 ggctaaagtgcacttttcccccttaactttcaaaaacttgcaattttggccccctaagtac-aaaactataattttggccccctaagatttagccccatt 12353362  T
Q  320 gca 322  Q
    |||    
T  12353361 gca 12353359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 245 - 325
Target Start/End: Complemental strand, 24123975 - 24123893
Alignment:
Q  245 taactttcaaaaacttgtaattttggcccct-aagtacaaaaattacaatttt-gccccctaagatttagcccctttgcatct 325  Q
    ||||||||||||||||| |||||||||| || |||||| |||||||||||||| ||| |||||||||||||||||||||||||    
T  24123975 taactttcaaaaacttgcaattttggcctcttaagtactaaaattacaattttagcctcctaagatttagcccctttgcatct 24123893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 223 - 321
Target Start/End: Original strand, 8388464 - 8388564
Alignment:
Q  223 ggctaaagtgcactttttcccctaactttcaaaaacttgtaatttt-ggcccctaagtacaaaaattacaatttt-gccccctaagatttagcccctttg 320  Q
    ||||||||||||||||  ||||||||||| ||||| ||| |||||| | |||||| ||||||||| || |||||| ||||||||||||||||||||||||    
T  8388464 ggctaaagtgcactttcccccctaacttttaaaaagttgcaattttagccccctatgtacaaaaactataattttggccccctaagatttagcccctttg 8388563  T
Q  321 c 321  Q
    |    
T  8388564 c 8388564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 325
Target Start/End: Complemental strand, 2380021 - 2379919
Alignment:
Q  223 ggctaaagtgcactttttcccctaactttcaaaaacttgtaattttggcccctaagtacaaaaattacaatttt-gccccctaagatttagcccctttgc 321  Q
    |||||||||  |||||| ||||||||||||||||| |||||||||||||||||| ||||  ||| ||||||||| ||||| ||||||||||| | |||||    
T  2380021 ggctaaagtttacttttccccctaactttcaaaaagttgtaattttggcccctatgtac-gaaactacaattttggccccttaagatttagctcatttgc 2379923  T
Q  322 atct 325  Q
    ||||    
T  2379922 atct 2379919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 241 - 322
Target Start/End: Original strand, 18978039 - 18978122
Alignment:
Q  241 cccctaactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaatttt-gccccctaagatttagcccctttgca 322  Q
    |||||||||||||||| |||  |||||||||||| |||||||||||| ||||||||| ||||| ||||||||||||||||||||    
T  18978039 cccctaactttcaaaatctttcaattttggccccctaagtacaaaaactacaattttggccccttaagatttagcccctttgca 18978122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 226 - 322
Target Start/End: Complemental strand, 29968434 - 29968335
Alignment:
Q  226 taaagtgcactttttcccct-aactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatt-ttgccccctaagatttagcccctttgca 322  Q
    |||||||||||||| ||||| |||||| ||||||||| |||||||| |||||||||||||||| ||||||| | | |||||||||||||||||| |||||    
T  29968434 taaagtgcacttttcccccttaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattctggtcccctaagatttagccccattgca 29968335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 325
Target Start/End: Complemental strand, 30336602 - 30336496
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcc-cctaagtacaaaaattacaatttt-gccccctaagatttagcccctt 318  Q
    ||||||||||||||| ||||||  |||||||||||||||| ||||||| ||| |||||||||||||| |||||||||  ||| |||||||||||||  ||    
T  30336602 ggctaaagtgcacttcttcccccctaactttcaaaaacttataattttagcctcctaagtacaaaaactacaattttaaccctctaagatttagccattt 30336503  T
Q  319 tgcatct 325  Q
    |||||||    
T  30336502 tgcatct 30336496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 221 - 322
Target Start/End: Original strand, 11287774 - 11287879
Alignment:
Q  221 ttggctaaagtgcactttttc--ccctaactttcaaaaacttgtaattttggccc-ctaagtacaaaaattacaatttt-gccccctaagatttagcccc 316  Q
    |||| ||||||||||||||||  |||||||||| ||||||||| ||||||||||| ||||||||| ||| ||||||||| ||||||||||| ||| | ||    
T  11287774 ttggataaagtgcactttttcacccctaactttaaaaaacttgcaattttggcccactaagtacagaaactacaattttggccccctaagaattaactcc 11287873  T
Q  317 tttgca 322  Q
    ||||||    
T  11287874 tttgca 11287879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 223 - 323
Target Start/End: Original strand, 1823552 - 1823656
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggccc-ctaagtacaaaaattacaattttgc-cccctaagatttagcccctt 318  Q
    |||||||||| |||||||||||  ||||||| ||||||||| ||||||| ||| ||||||||||||| |||||||| |  ||||||||||||||||| ||    
T  1823552 ggctaaagtgtactttttcccccttaacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaatttcggtcccctaagatttagcccatt 1823651  T
Q  319 tgcat 323  Q
    |||||    
T  1823652 tgcat 1823656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 223 - 323
Target Start/End: Original strand, 1857997 - 1858101
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggccc-ctaagtacaaaaattacaattttgc-cccctaagatttagcccctt 318  Q
    |||||||||| |||||||||||  ||||||| ||||||||| ||||||| ||| ||||||||||||| |||||||| |  ||||||||||||||||| ||    
T  1857997 ggctaaagtgtactttttcccccttaacttttaaaaacttgcaattttgaccctctaagtacaaaaactacaatttcggtcccctaagatttagcccatt 1858096  T
Q  319 tgcat 323  Q
    |||||    
T  1858097 tgcat 1858101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 226 - 322
Target Start/End: Original strand, 11282011 - 11282111
Alignment:
Q  226 taaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagcccctttgc 321  Q
    |||||||||||||||||||  ||||||| ||||| ||| |||||||||||| ||  ||||||||| ||||||||| |||||||||||||| |||||||||    
T  11282011 taaagtgcactttttcccccttaacttttaaaaagttgcaattttggccccctatatacaaaaatgacaattttgaccccctaagatttaacccctttgc 11282110  T
Q  322 a 322  Q
    |    
T  11282111 a 11282111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 325
Target Start/End: Original strand, 22220386 - 22220494
Alignment:
Q  221 ttggctaaagtgcactttttcccct--aactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagcccc 316  Q
    ||||||||||||||||||| |||||  |||||| ||| ||||| ||||||| |||| || ||| ||||| |||||||||| ||||||||||||||||||     
T  22220386 ttggctaaagtgcacttttccccctctaactttaaaatacttgcaattttgaccccctatgtataaaaactacaattttggccccctaagatttagccca 22220485  T
Q  317 tttgcatct 325  Q
    |||||||||    
T  22220486 tttgcatct 22220494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 242 - 322
Target Start/End: Original strand, 45112891 - 45112972
Alignment:
Q  242 ccctaactttcaaaaacttgtaattttggcccctaagtacaaaaattacaatttt-gccccctaagatttagcccctttgca 322  Q
    |||||||||||||||| |||||||||| | | |||||||||||||||| |||||| | ||||||||| ||||||||||||||    
T  45112891 ccctaactttcaaaaatttgtaattttagtctctaagtacaaaaattataattttggtcccctaagaattagcccctttgca 45112972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 223 - 325
Target Start/End: Complemental strand, 5514370 - 5514266
Alignment:
Q  223 ggctaaagtgcactttt-tcccctaactttcaaaaacttgtaattttggcc-cctaagtacaaaaattacaattttgccccctaagatttagcccctttg 320  Q
    ||||||||||||||||| |||||||| ||| ||||||||| |||||| |||  |||| |||||||| |||||||||| || |||| ||||||||| ||||    
T  5514370 ggctaaagtgcacttttatcccctaattttaaaaaacttgcaattttagccttctaaatacaaaaactacaattttgacctctaaaatttagcccatttg 5514271  T
Q  321 catct 325  Q
    |||||    
T  5514270 catct 5514266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 241 - 322
Target Start/End: Original strand, 18970930 - 18971013
Alignment:
Q  241 cccctaactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttgccccct-aagatttagcccctttgca 322  Q
    |||||||||||||||| |||  |||||||||||| |||||||||||| |||||||||| ||||| |||||||| ||||||||||    
T  18970930 cccctaactttcaaaatctttcaattttggccccctaagtacaaaaactacaattttgacccctgaagatttaacccctttgca 18971013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 241 - 322
Target Start/End: Complemental strand, 24488760 - 24488678
Alignment:
Q  241 cccctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttgccccctaagatttagcccctttgca 322  Q
    ||||||||||||||||||||| |||||||| ||||||| ||  ||||  ||||||||||||| |||||||||||||| |||||    
T  24488760 cccctaactttcaaaaacttgcaattttggccccctaaatatcaaaacaacaattttgccccgtaagatttagccccattgca 24488678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 223 - 314
Target Start/End: Original strand, 12351921 - 12352016
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagcc 314  Q
    |||||||||||| |||  ||||  ||||||||||||| ||| ||||||| |||| |||||||||||| |||||||||| |||||||||||||||||    
T  12351921 ggctaaagtgcattttcccccccttaactttcaaaaatttgcaattttgaccccctaagtacaaaaactacaattttgaccccctaagatttagcc 12352016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 223 - 325
Target Start/End: Original strand, 24359809 - 24359913
Alignment:
Q  223 ggctaaagtgcactttttccc-ctaactttcaaaaacttgtaattttggcccctaagtacaaaaattacaattttg-ccccctaagatttagcccctttg 320  Q
    ||||||||||| ||||||||| |||||||| ||||| |||  ||||| ||| |||  |||||||| |||||||||| |||||||||||||||||  ||||    
T  24359809 ggctaaagtgctctttttccctctaacttttaaaaagttgcgatttttgcctctatatacaaaaactacaattttgaccccctaagatttagcctatttg 24359908  T
Q  321 catct 325  Q
    |||||    
T  24359909 catct 24359913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 224 - 322
Target Start/End: Complemental strand, 18979220 - 18979118
Alignment:
Q  224 gctaaagtgcactttttcccc--taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagccccttt 319  Q
    |||||||||||||||| ||||  |||||||||| |||||| |||||||| ||||||| || ||||| ||||||||| ||||| || |||||||||| |||    
T  18979220 gctaaagtgcacttttccccccctaactttcaacaacttgcaattttggccccctaaatataaaaactacaattttggccccttatgatttagcccattt 18979121  T
Q  320 gca 322  Q
    |||    
T  18979120 gca 18979118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 325
Target Start/End: Complemental strand, 30570353 - 30570251
Alignment:
Q  226 taaagtgcactttttcccct--aactttcaaaaacttgtaattttggcccctaagtacaaaaattacaattttg-ccccctaagatttagcccctttgca 322  Q
    |||||||||| |||||||||  || ||| ||||| ||| |||||||  || || |||||||||||| ||||||| |||||||||||||||||| ||||||    
T  30570353 taaagtgcaccttttcccctctaagttttaaaaagttgcaattttgatccttatgtacaaaaattagaattttggccccctaagatttagcccttttgca 30570254  T
Q  323 tct 325  Q
    |||    
T  30570253 tct 30570251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 223 - 315
Target Start/End: Complemental strand, 5003197 - 5003103
Alignment:
Q  223 ggctaaagtgcactttttcccctaactttcaaaaacttgtaatttt-ggcccctaagtac-aaaaattacaattttgccccctaagatttagccc 315  Q
    |||||||| |||||||  |||||||||||||||| |||| ||||||   ||||||||||| |||||  ||||||||| |||||||||||||||||    
T  5003197 ggctaaagcgcactttcccccctaactttcaaaatcttgcaattttaaacccctaagtactaaaaaccacaattttgtcccctaagatttagccc 5003103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 223 - 325
Target Start/End: Original strand, 24122883 - 24122988
Alignment:
Q  223 ggctaaagtgcactttttcccc-taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaatttt-gccccctaagatttagccccttt 319  Q
    |||||||||||| |||| |||| ||||||| ||||| ||| ||||||| |||| |||||||||||| || |||||| | |||||||||||||||  ||||    
T  24122883 ggctaaagtgcatttttcccccctaactttaaaaaatttgcaattttgaccccctaagtacaaaaactataattttagtcccctaagatttagcttcttt 24122982  T
Q  320 gcatct 325  Q
    ||||||    
T  24122983 gcatct 24122988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 223 - 322
Target Start/End: Complemental strand, 11283310 - 11283207
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaatttt-ggcccctaagtacaaaaattacaatttt-gccccctaagatttagcccctt 318  Q
    |||||||||||| |||  ||||  ||||||||||||| |||||||||| | |||||| ||| |||||| |||||||| | ||||||| ||||||||||||    
T  11283310 ggctaaagtgcattttcccccccttaactttcaaaaagttgtaattttagccccctatgtataaaaatgacaattttggtcccctaaaatttagcccctt 11283211  T
Q  319 tgca 322  Q
    ||||    
T  11283210 tgca 11283207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 325
Target Start/End: Complemental strand, 40471244 - 40471142
Alignment:
Q  226 taaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccctaagtacaaaaattacaatttt-gccccctaagatttagcccctttgca 322  Q
    |||||||||||||| ||||  ||||||| ||||||||  |||||||| || ||| |||||||| ||||||||| ||||| ||||||||| || ||||| |    
T  40471244 taaagtgcacttttccccctttaactttaaaaaacttacaattttggtccataaatacaaaaactacaattttagccccttaagatttaacctctttgta 40471145  T
Q  323 tct 325  Q
    |||    
T  40471144 tct 40471142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 325
Target Start/End: Original strand, 43661267 - 43661371
Alignment:
Q  225 ctaaagtgcacttttt--cccctaactttcaaaaacttgtaattttggcccctaa-gtacaaaaattacaattttg-ccccctaagatttagcccctttg 320  Q
    |||||||||||||||   ||| ||| ||| ||||| ||  |||||||| |||| | ||||||||| || ||||||| |||||||||||||||||||||||    
T  43661267 ctaaagtgcacttttctacccttaattttaaaaaagttacaattttggtcccttatgtacaaaaactataattttggccccctaagatttagcccctttg 43661366  T
Q  321 catct 325  Q
    |||||    
T  43661367 catct 43661371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 268
Target Start/End: Complemental strand, 11288961 - 11288914
Alignment:
Q  223 ggctaaagtgcactttttc--ccctaactttcaaaaacttgtaatttt 268  Q
    |||||||||||||||||||  |||||||||||||||||||| ||||||    
T  11288961 ggctaaagtgcactttttcacccctaactttcaaaaacttgcaatttt 11288914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 286
Target Start/End: Complemental strand, 23170098 - 23170034
Alignment:
Q  223 ggctaaagtgcactttttcccctaactttcaaaaacttgtaattttg-gcccctaagtacaaaaa 286  Q
    |||||||||||| |||  ||||||| ||||||||||||| |||||||  ||||||||||||||||    
T  23170098 ggctaaagtgcattttcccccctaattttcaaaaacttgcaattttgatcccctaagtacaaaaa 23170034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 274
Target Start/End: Original strand, 24483141 - 24483196
Alignment:
Q  221 ttggctaaagtgcactttttccc--ctaactttcaaaaacttgtaattttggcccc 274  Q
    ||||||||||||||||||| |||  |||| ||||||||||||| ||||||||||||    
T  24483141 ttggctaaagtgcacttttcccctcctaattttcaaaaacttgcaattttggcccc 24483196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 311
Target Start/End: Complemental strand, 45114617 - 45114526
Alignment:
Q  223 ggctaaagtgcactttttc--ccctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttgccccctaagattta 311  Q
    |||| |||||||||||| |  |||||||||||||||||||| ||||||||  | ||| ||||| ||| |||||||||| || ||||||||||    
T  45114617 ggctgaagtgcacttttccgcccctaactttcaaaaacttgcaattttggttcactatgtacacaaactacaattttggcctctaagattta 45114526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 319
Target Start/End: Complemental strand, 8389787 - 8389690
Alignment:
Q  226 taaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccctaa-gtacaaaaattacaatttt-gccccctaagatttagccccttt 319  Q
    |||||||||||||| |||   ||| ||||||||| ||| |||||||| |||| | ||||||||| ||||||||| | ||||||||||||| |||||||    
T  8389787 taaagtgcacttttcccctcttaagtttcaaaaagttgcaattttggtcccttatgtacaaaaactacaattttagtcccctaagatttaaccccttt 8389690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 325
Target Start/End: Original strand, 40469356 - 40469446
Alignment:
Q  237 ttttcccctaactttcaaaaacttgtaatttt-ggcccctaagtacaaaaattacaatttt-gccccctaagatttagcccctttgcatct 325  Q
    ||||||| ||||||||||||| ||||||||||   || |||| ||||||||||||||||||  || | |||||||||| ||||||| ||||    
T  40469356 ttttcccttaactttcaaaaatttgtaattttcatcctctaaatacaaaaattacaattttaaccacataagatttagtccctttgtatct 40469446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 325
Target Start/End: Original strand, 30568887 - 30568992
Alignment:
Q  223 ggctaaagtgcactttttccc-ctaactttcaaaaacttgtaattttggcccctaag-tacaaaaattacaattttgc-cccctaagatttagccccttt 319  Q
    ||||||||||||||||  ||| |||| ||||||||| ||  |||||||  | || || |||||||| || |||||||  |||||||||||||||||||||    
T  30568887 ggctaaagtgcactttccccctctaagtttcaaaaagttacaattttgatctcttaggtacaaaaactataattttgatcccctaagatttagccccttt 30568986  T
Q  320 gcatct 325  Q
    ||||||    
T  30568987 gcatct 30568992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 221 - 274
Target Start/End: Complemental strand, 32974039 - 32973984
Alignment:
Q  221 ttggctaaagtgcacttttt--cccctaactttcaaaaacttgtaattttggcccc 274  Q
    ||||||||||||||||||||  ||||||||||||||||  |||  |||||||||||    
T  32974039 ttggctaaagtgcactttttcccccctaactttcaaaacgttgcgattttggcccc 32973984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 9e-27; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 221 - 325
Target Start/End: Original strand, 18371422 - 18371530
Alignment:
Q  221 ttggctaaagtgcactttttccc--ctaactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaatttt-gccccctaagatttagcccc 316  Q
    ||||||||||||||||||| |||  |||||||||||||||||| |||||||||||| |||||||||||| ||||||||| ||||||||||||||||| |     
T  18371422 ttggctaaagtgcacttttcccctcctaactttcaaaaacttgcaattttggccccttaagtacaaaaactacaattttggccccctaagatttagcaca 18371521  T
Q  317 tttgcatct 325  Q
    |||||||||    
T  18371522 tttgcatct 18371530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 240 - 325
Target Start/End: Original strand, 22629505 - 22629592
Alignment:
Q  240 tcccctaactttcaaaaacttgtaattttggcc-cctaagtacaaaaattacaattttg-ccccctaagatttagcccctttgcatct 325  Q
    |||| ||| |||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  22629505 tcccttaattttcaaaaacttgtaattttggcctcctaagtacaaaaactacaattttggccccctaagatttagcccctttgcatct 22629592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 223 - 315
Target Start/End: Original strand, 127337 - 127431
Alignment:
Q  223 ggctaaagtgcactttttcccc-taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttgccccctaagatttagccc 315  Q
    ||||||||||||||||| |||| ||||||||||||||||| |||||||| ||||||||||| ||||  ||||||| |||||||||||||||||||    
T  127337 ggctaaagtgcacttttcccccctaactttcaaaaacttgcaattttggtcccctaagtaccaaaaccacaatttagccccctaagatttagccc 127431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 241 - 325
Target Start/End: Complemental strand, 18372538 - 18372452
Alignment:
Q  241 cccctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagcccctttgcatct 325  Q
    ||||||| ||||||||||||| |||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||    
T  18372538 cccctaattttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccccctaagatttagcccctttgtatct 18372452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 325
Target Start/End: Original strand, 21505416 - 21505520
Alignment:
Q  223 ggctaaagtgcactttttcccctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttg-ccccctaagatttagcccctttg 320  Q
    ||||||||||||||||| ||||||||||||||||| |||  ||||||| |||| |  |||||||| |||||||||| |||| ||||||||||||||||||    
T  21505416 ggctaaagtgcacttttccccctaactttcaaaaagttgcgattttggcccccgatatacaaaaactacaattttgaccccataagatttagcccctttg 21505515  T
Q  321 catct 325  Q
    |||||    
T  21505516 catct 21505520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 221 - 322
Target Start/End: Original strand, 31659620 - 31659726
Alignment:
Q  221 ttggctaaagtgcactttttcccc---taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaatttt-gccccctaagatttagccc 315  Q
    ||||||||||||||||||| ||||   ||||||||||||||||  ||||||| |||| |||||||||||| ||||||||| |||||||||||||||||||    
T  31659620 ttggctaaagtgcacttttaccccccctaactttcaaaaacttacaattttgaccccctaagtacaaaaactacaattttggccccctaagatttagccc 31659719  T
Q  316 ctttgca 322  Q
    | |||||    
T  31659720 cattgca 31659726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 236 - 325
Target Start/End: Original strand, 47369796 - 47369887
Alignment:
Q  236 tttttcccctaactttcaaaaacttgtaattttggcc-cctaagtacaaaaattacaatttt-gccccctaagatttagcccctttgcatct 325  Q
    |||||||||||||||||||||||||| |||||| ||| | |||||||||||| || |||||| ||||| |||||||||||||||||||||||    
T  47369796 tttttcccctaactttcaaaaacttgcaattttagcctcataagtacaaaaactataattttggccccttaagatttagcccctttgcatct 47369887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 223 - 325
Target Start/End: Original strand, 7500455 - 7500560
Alignment:
Q  223 ggctaaagtgcactttttcccct-aactttcaaaaacttgtaattttggccc-ctaagtacaaaaattacaattttg-ccccctaagatttagccccttt 319  Q
    ||||||||||||||||| ||||| |||||||||||||||| |||||||  || ||||||| | |||  ||||||||| ||||||||||||||||||||||    
T  7500455 ggctaaagtgcacttttcccccttaactttcaaaaacttgcaattttgatcctctaagtatagaaaccacaattttggccccctaagatttagccccttt 7500554  T
Q  320 gcatct 325  Q
    ||||||    
T  7500555 gcatct 7500560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 223 - 322
Target Start/End: Complemental strand, 3227695 - 3227592
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttgc-cccctaagatttagcccctt 318  Q
    ||||||||||||||||| ||||  ||||||||||||||||| |||||||| ||||||||||| ||||  ||||||| || |||||||||||||||||| |    
T  3227695 ggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcacccctaagatttagccccat 3227596  T
Q  319 tgca 322  Q
    ||||    
T  3227595 tgca 3227592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 325
Target Start/End: Complemental strand, 7501953 - 7501847
Alignment:
Q  223 ggctaaagtgcactttttcccct--aactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagcccctt 318  Q
    ||||||||||||||||| |||||  |||||||||||||||| |||||||| ||||||||||  ||||  |||||||| ||||| |||||| |||||||||    
T  7501953 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtatcaaaacaacaattttggccccttaagatgtagcccctt 7501854  T
Q  319 tgcatct 325  Q
    |||||||    
T  7501853 tgcatct 7501847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 325
Target Start/End: Complemental strand, 22630553 - 22630447
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagcccctt 318  Q
    ||||||||||||||||| || |  ||||||||||||||||| |||||||| ||||||| |||||||| ||||||||| ||||||||||||| |||| |||    
T  22630553 ggctaaagtgcacttttccctccataactttcaaaaacttgcaattttggccccctaattacaaaaactacaattttagccccctaagattcagcctctt 22630454  T
Q  319 tgcatct 325  Q
    || ||||    
T  22630453 tgtatct 22630447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 226 - 325
Target Start/End: Complemental strand, 42886384 - 42886281
Alignment:
Q  226 taaagtgcactttt-tcc-cctaactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaatttt-gccccctaagatttagcccctttgc 321  Q
    |||||||||||||| ||| ||||||||||||||| ||| ||||||| |||| ||| |||||||| ||||||||| ||||||||||||||||||| |||||    
T  42886384 taaagtgcacttttctcctcctaactttcaaaaatttgcaattttgaccccctaaatacaaaaactacaattttagccccctaagatttagcccatttgc 42886285  T
Q  322 atct 325  Q
    ||||    
T  42886284 atct 42886281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 223 - 315
Target Start/End: Complemental strand, 17782654 - 17782558
Alignment:
Q  223 ggctaaagtgcactttttcccct--aactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttg-ccccctaagatttagccc 315  Q
    ||||||||||||||||| |||||  |||||||||||||||| |||||||| ||||||||||| ||||  ||||||| | ||||||||||||||||||    
T  17782654 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagccc 17782558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 223 - 322
Target Start/End: Original strand, 31949322 - 31949425
Alignment:
Q  223 ggctaaagtgcactttttcc--cctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttg-ccccctaagatttagcccctt 318  Q
    ||||||||||||||||| ||  ||||| ||||||||||||| |||||||| ||||||||||| ||||  ||||||| | ||||||||||||||||||| |    
T  31949322 ggctaaagtgcacttttccctccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagccccat 31949421  T
Q  319 tgca 322  Q
    ||||    
T  31949422 tgca 31949425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 223 - 297
Target Start/End: Complemental strand, 597381 - 597308
Alignment:
Q  223 ggctaaagtgcactttttcccctaactttcaaaaacttgtaattttggcccctaagtacaaaaattacaattttg 297  Q
    |||||| ||||| |||||||||||||||||||||||||| ||||||| | | |||||||||||| ||||||||||    
T  597381 ggctaatgtgca-tttttcccctaactttcaaaaacttgaaattttgacgcataagtacaaaaactacaattttg 597308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 322
Target Start/End: Complemental strand, 47525470 - 47525365
Alignment:
Q  221 ttggctaaagtgcactttttcccct--aactttcaaaaacttgtaatttt-ggcccctaagtacaaaaattacaattttg-ccccctaagatttagcccc 316  Q
    ||||||||||||||||||| |||||  |||||||||||||||| |||||| | ||||||||||  ||||  ||||||| | |||||||||||||||||||    
T  47525470 ttggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttagccccctaagtatcaaaaccacaatttagcccccctaagatttagcccc 47525371  T
Q  317 tttgca 322  Q
     |||||    
T  47525370 attgca 47525365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 322
Target Start/End: Complemental strand, 48935006 - 48934901
Alignment:
Q  221 ttggctaaagtgcactttttc--ccctaactttcaaaaacttgtaattttggccc-ctaagtacaaaaattacaattttg-ccccctaagatttagcccc 316  Q
    |||||||||||||| |||| |  |||||||||||||||||||||||||||| ||| ||||||||||||| || |||||||  |||| |||| |||||||     
T  48935006 ttggctaaagtgcatttttccacccctaactttcaaaaacttgtaattttgaccctctaagtacaaaaactaaaattttgatcccccaagaattagccca 48934907  T
Q  317 tttgca 322  Q
    ||||||    
T  48934906 tttgca 48934901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 224 - 322
Target Start/End: Original strand, 3227109 - 3227210
Alignment:
Q  224 gctaaagtgcactttttcccc-taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttgccccc-taagatttagcccctttg 320  Q
    |||||||||||||||  |||| ||| ||||||||||||| |||||||| ||||||||||| ||||  ||||||| |||||| |||||||||||||| |||    
T  3227109 gctaaagtgcactttccccccctaattttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccttaagatttagccccattg 3227208  T
Q  321 ca 322  Q
    ||    
T  3227209 ca 3227210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 228 - 325
Target Start/End: Complemental strand, 14999249 - 14999150
Alignment:
Q  228 aagtgcactttttcccc-taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttgcc-ccctaagatttagcccctttgcatc 324  Q
    |||||||||||| |||| ||| |||||||| |||| ||||||| |||| ||| |||||||| |||||||||| | |||||||||||||||||||||||||    
T  14999249 aagtgcacttttcccccctaattttcaaaa-cttgcaattttgaccccctaaatacaaaaactacaattttggcgccctaagatttagcccctttgcatc 14999151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 223 - 322
Target Start/End: Complemental strand, 31949903 - 31949800
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttgc-cccctaagatttagcccctt 318  Q
    |||||||||||||| || ||||  ||||||||||||||||| |||||||| ||||||| ||| ||||  ||||||| || |||||||||||||||||| |    
T  31949903 ggctaaagtgcactcttccccccctaactttcaaaaacttgcaattttggccccctaaataccaaaaccacaatttagcacccctaagatttagccccat 31949804  T
Q  319 tgca 322  Q
    ||||    
T  31949803 tgca 31949800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 225 - 322
Target Start/End: Original strand, 17781663 - 17781764
Alignment:
Q  225 ctaaagtgcactttttcccc--taactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaattt-tgccccctaagatttagcccctttg 320  Q
    ||||||||||||||| ||||  ||||||||||||||||| |||||||  ||||||||||| ||||  |||||||   ||||||||||||||||||| |||    
T  17781663 ctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttaacccccctaagatttagccccattg 17781762  T
Q  321 ca 322  Q
    ||    
T  17781763 ca 17781764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 320
Target Start/End: Original strand, 11658374 - 11658480
Alignment:
Q  218 atattggctaaagtgcactttttcccc--taactttcaaaaacttgtaatttt-ggcccctaagtacaaaaattacaattttgccccct-aagatttagc 313  Q
    |||| ||||||| ||||||||| ||||  |||||||||||||| || |||||| | |||||| ||||||||| ||||||||||  |||| |||| |||||    
T  11658374 atataggctaaattgcacttttccccccttaactttcaaaaacatgcaattttagccccctatgtacaaaaactacaattttggtccctcaagaattagc 11658473  T
Q  314 ccctttg 320  Q
    |||||||    
T  11658474 ccctttg 11658480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 322
Target Start/End: Complemental strand, 11662649 - 11662549
Alignment:
Q  226 taaagtgcactttttcccc--taactttcaaaaacttgtaattttggc-ccctaagtacaaaaattacaatttt-gccccctaagatttagcccctttgc 321  Q
    ||||||||| |||| ||||  ||||||||||||||||| |||||| || | ||| ||||||||| || |||||| |||||| |||| |||||||||||||    
T  11662649 taaagtgcatttttccccccttaactttcaaaaacttgcaattttagctctctatgtacaaaaactataattttggccccccaagaattagcccctttgc 11662550  T
Q  322 a 322  Q
    |    
T  11662549 a 11662549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 292
Target Start/End: Complemental strand, 20163657 - 20163585
Alignment:
Q  223 ggctaaagtgcactttttc--ccctaactttcaaaaacttgtaattttggc-ccctaagtacaaaaattacaa 292  Q
    ||||||||||||||| | |  |||||||||||||||||||| ||||||||| ||||| ||||||||| |||||    
T  20163657 ggctaaagtgcacttctccacccctaactttcaaaaacttgcaattttggctccctatgtacaaaaactacaa 20163585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 274
Target Start/End: Original strand, 14998008 - 14998062
Alignment:
Q  223 ggctaaagtgcac---tttttcccctaactttcaaaaacttgtaattttggcccc 274  Q
    |||||||||||||   |||||||||||||||||||||||||  ||||||||||||    
T  14998008 ggctaaagtgcacctttttttcccctaactttcaaaaacttacaattttggcccc 14998062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 325
Target Start/End: Original strand, 14998042 - 14998086
Alignment:
Q  282 aaaaattacaattttg-ccccctaagatttagcccctttgcatct 325  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||    
T  14998042 aaaacttacaattttggccccctaagatttagcccctttgcatct 14998086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 297
Target Start/End: Original strand, 43899448 - 43899523
Alignment:
Q  223 ggctaaagtgcactttttcccctaactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaattttg 297  Q
    ||||||||| || |||||||| ||||||||||||||||| |||||||  |  |||| || ||||||||||||||||    
T  43899448 ggctaaagtacattttttcccttaactttcaaaaacttgcaattttgatcttctaaatataaaaattacaattttg 43899523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 322
Target Start/End: Complemental strand, 128699 - 128599
Alignment:
Q  226 taaagtgcactttttcccc--taactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaattttg-ccccctaagatttagcccctttgc 321  Q
    |||||||||||||| || |  ||||||||||||| ||| |||||||  ||||||||||| ||||  ||||||| | |||||||||||| |||||| ||||    
T  128699 taaagtgcacttttcccaccataactttcaaaaatttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagattcagccccattgc 128600  T
Q  322 a 322  Q
    |    
T  128599 a 128599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 286
Target Start/End: Complemental strand, 34174083 - 34174018
Alignment:
Q  223 ggctaaagtgcactttttcccc-taactttcaaaaacttgtaattttgg-cccctaagtacaaaaa 286  Q
    ||||||||||||||||| |||| || ||||||||| |||| |||||||| ||||||||||| ||||    
T  34174083 ggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggccccctaagtaccaaaa 34174018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 325
Target Start/End: Complemental strand, 43900585 - 43900484
Alignment:
Q  226 taaagtgcactttt-tcccctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttgccccctaagatttagcccctttgcat 323  Q
    |||||||||||||| ||  |||||||| ||||| ||||||||||||  |||||| || ||||| |||| |||||||||| || ||||| | | |||||||    
T  43900585 taaagtgcacttttctcttctaacttttaaaaatttgtaattttggttccctaaatataaaaactacagttttgcccccaaaaatttatctcatttgcat 43900486  T
Q  324 ct 325  Q
    ||    
T  43900485 ct 43900484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 286
Target Start/End: Original strand, 47524532 - 47524591
Alignment:
Q  230 gtgcactttttcccct--aactttcaaaaacttgtaattttgg-cccctaagtacaaaaa 286  Q
    |||||||||| |||||  |||||||||||||||| |||||||| ||||||||||| ||||    
T  47524532 gtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaa 47524591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 4e-26; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 223 - 317
Target Start/End: Complemental strand, 49308127 - 49308031
Alignment:
Q  223 ggctaaagtgcactttttcccc-taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttgccccctaagatttagcccct 317  Q
    ||||||||||||||||| |||| ||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||| ||||| ||||||    
T  49308127 ggctaaagtgcacttttcccccctaactttcaaaaacttgcaattttggccccctaagtacaaaaactacaattttgccccctatgattttgcccct 49308031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 223 - 325
Target Start/End: Complemental strand, 1290299 - 1290193
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggccc-ctaagtacaaaaattacaatttt-gccccctaagatttagcccctt 318  Q
    ||||||||||||||||| ||||  |||||||||||| |||| ||||||||||| ||||||||||||| ||||||||| ||||||||||||||| ||||||    
T  1290299 ggctaaagtgcacttttccccccttaactttcaaaatcttgcaattttggccctctaagtacaaaaactacaattttagccccctaagatttaacccctt 1290200  T
Q  319 tgcatct 325  Q
    |||||||    
T  1290199 tgcatct 1290193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 226 - 325
Target Start/End: Original strand, 8155741 - 8155843
Alignment:
Q  226 taaagtgcactttttcccctaactttcaaaaacttgtaattttgg--cccctaagtacaaaaattacaatttt-gccccctaagatttagcccctttgca 322  Q
    |||||||||||||| ||||||||||||||||||||| |||||| |  ||||||||| |||||| ||||||||| |||||||||||||||||| |||||||    
T  8155741 taaagtgcacttttccccctaactttcaaaaacttgcaattttagctcccctaagttcaaaaactacaattttggccccctaagatttagccgctttgca 8155840  T
Q  323 tct 325  Q
    |||    
T  8155841 tct 8155843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 226 - 322
Target Start/End: Original strand, 35934347 - 35934445
Alignment:
Q  226 taaagtgcactttttcccctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagcccctttgca 322  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||||||||| | |||||| |||||| ||||| |||||||||||||| |||||    
T  35934347 taaagtgcacttttccccctaactttcaaaaacttgtaattttggtcccctaagtaaagaaattataattttggccccttaagatttagccccattgca 35934445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 214 - 322
Target Start/End: Complemental strand, 31601095 - 31600983
Alignment:
Q  214 ttttatattggctaaagtgcactttttccc--ctaactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaattttg-ccccctaagatt 309  Q
    |||||| |||||||||||||||||||||||  |||||||| ||||||||| |||||||  |||||||||||||||| |||||||||| |||| |||||||    
T  31601095 ttttattttggctaaagtgcactttttcccctctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttgaccccttaagatt 31600996  T
Q  310 tagcccctttgca 322  Q
    |||||| ||||||    
T  31600995 tagcccatttgca 31600983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 223 - 325
Target Start/End: Complemental strand, 1835203 - 1835097
Alignment:
Q  223 ggctaaagtgcactttttc--ccctaactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagcccctt 318  Q
    ||||||||||||||||| |  |||||||||||||||||||| ||||||| |||| ||||||  |||| |||||||||| |||||||||||||||||||||    
T  1835203 ggctaaagtgcacttttccatccctaactttcaaaaacttgcaattttgaccccctaagtattaaaactacaattttgaccccctaagatttagcccctt 1835104  T
Q  319 tgcatct 325  Q
    |||||||    
T  1835103 tgcatct 1835097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 218 - 322
Target Start/End: Original strand, 17382988 - 17383095
Alignment:
Q  218 atattggctaaagtgcactttt-tcccctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagcc 314  Q
    |||| ||||||||||||||||| |||||||||||||||||||||| |||||||| ||| |||||||||||| ||||||||| |||||| |||| ||| ||    
T  17382988 atataggctaaagtgcacttttctcccctaactttcaaaaacttgcaattttggtcccttaagtacaaaaactacaattttggccccccaagaattatcc 17383087  T
Q  315 cctttgca 322  Q
    ||||||||    
T  17383088 cctttgca 17383095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 322
Target Start/End: Original strand, 1963196 - 1963299
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcc-cctaagtacaaaaattacaatttt-gccccctaagatttagcccctt 318  Q
    ||||||||||||||||| ||||  ||||||||||||| ||| |||||||||| |||| ||||||||| ||||||||| ||||||||||| ||||||||||    
T  1963196 ggctaaagtgcacttttccccccttaactttcaaaaagttgcaattttggcctcctatgtacaaaaactacaattttagccccctaagaattagcccctt 1963295  T
Q  319 tgca 322  Q
    ||||    
T  1963296 tgca 1963299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 226 - 325
Target Start/End: Original strand, 12129626 - 12129729
Alignment:
Q  226 taaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagcccctttgc 321  Q
    |||||||||||||| |||   ||||||||||||||||| |||||||||||| |||||||||||| |||||||||| |||| ||||||||||||| |||||    
T  12129626 taaagtgcacttttcccctcttaactttcaaaaacttgcaattttggccccgtaagtacaaaaactacaattttgaccccttaagatttagcccatttgc 12129725  T
Q  322 atct 325  Q
    ||||    
T  12129726 atct 12129729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 225 - 322
Target Start/End: Complemental strand, 19750673 - 19750573
Alignment:
Q  225 ctaaagtgcactttttcccc-taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagcccctttgc 321  Q
    ||||||||||||||| |||| ||||||| ||||||||| |||||||| |||||||||||||||| |||||||||  ||||||||||||||||||| ||||    
T  19750673 ctaaagtgcacttttcccccctaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttacccccctaagatttagccccattgc 19750574  T
Q  322 a 322  Q
    |    
T  19750573 a 19750573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 225 - 322
Target Start/End: Original strand, 19789133 - 19789233
Alignment:
Q  225 ctaaagtgcactttttcccc-taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagcccctttgc 321  Q
    ||||||||||||||| |||| ||||||| ||||||||| |||||||| |||||||||||||||| |||||||||  ||||||||||||||||||| ||||    
T  19789133 ctaaagtgcacttttcccccctaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttacccccctaagatttagccccattgc 19789232  T
Q  322 a 322  Q
    |    
T  19789233 a 19789233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 322
Target Start/End: Original strand, 31599789 - 31599892
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttgc-cccctaagatttagcccctt 318  Q
    |||| |||||||||||||||||  ||||||| ||||||||| ||||||| |||| |||||||||||| ||||||||||  ||||||||||||||||||||    
T  31599789 ggctgaagtgcactttttcccccctaacttttaaaaacttgcaattttgaccccctaagtacaaaaactacaattttggtcccctaagatttagcccctt 31599888  T
Q  319 tgca 322  Q
    ||||    
T  31599889 tgca 31599892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 220 - 322
Target Start/End: Complemental strand, 10471492 - 10471386
Alignment:
Q  220 attggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttg-ccccctaagatttagccc 315  Q
    |||||||||||||||||||| ||||  ||||||||||||||||| |||||||| ||||||||||| ||||  ||||||| | ||||||||||||||||||    
T  10471492 attggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagcccccctaagatttagccc 10471393  T
Q  316 ctttgca 322  Q
    | |||||    
T  10471392 cattgca 10471386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 223 - 315
Target Start/End: Complemental strand, 26421722 - 26421627
Alignment:
Q  223 ggctaaagtgcactttttccc-ctaactttcaaaaacttgtaattttggcc-cctaagtacaaaaattacaattttg-ccccctaagatttagccc 315  Q
    ||||||||||||||||| ||| |||||||||||||||||| ||||||| || |||||||||||||| |||||||||| |||| |||||||||||||    
T  26421722 ggctaaagtgcacttttcccctctaactttcaaaaacttgcaattttgacctcctaagtacaaaaactacaattttgaccccttaagatttagccc 26421627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 223 - 322
Target Start/End: Original strand, 10470546 - 10470649
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggccc-ctaagtacaaaaattacaattttg-ccccctaagatttagcccctt 318  Q
    ||||||||||||||||| ||||  ||||||||||||||||| ||||||| ||| |||||||| ||||| ||||||| | ||||||||||||||||||| |    
T  10470546 ggctaaagtgcacttttccccccttaactttcaaaaacttgcaattttgaccctctaagtaccaaaatcacaatttagcccccctaagatttagccccat 10470645  T
Q  319 tgca 322  Q
    ||||    
T  10470646 tgca 10470649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 223 - 322
Target Start/End: Complemental strand, 25685923 - 25685820
Alignment:
Q  223 ggctaaagtgcactttttcccct--aactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttg-ccccctaagatttagcccctt 318  Q
    ||||||||||||||||| |||||  |||||||||||||||| |||||||| ||||||||||| ||||  ||||||| | ||||||||||||||||||| |    
T  25685923 ggctaaagtgcacttttccccctctaactttcaaaaacttgcaattttggccccctaagtaccaaaaccacaatttagaccccctaagatttagccccat 25685824  T
Q  319 tgca 322  Q
    ||||    
T  25685823 tgca 25685820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 319
Target Start/End: Complemental strand, 17388311 - 17388212
Alignment:
Q  223 ggctaaagtgcactttttcccc-taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagccccttt 319  Q
    ||||||||||||||||| |||| ||||||||||||||||| |||||||| ||| |||||||| ||| ||||||||| |||||| |||| |||||||||||    
T  17388311 ggctaaagtgcacttttcccccctaactttcaaaaacttgcaattttggtcccttaagtacataaactacaattttggccccccaagaattagccccttt 17388212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 223 - 322
Target Start/End: Complemental strand, 5526226 - 5526124
Alignment:
Q  223 ggctaaagtgcactttttccc-ctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttg-ccccctaagatttagccccttt 319  Q
    ||||||||||||||||| ||| |||||||||||||||||| |||||||| ||||||||||  ||||  ||||||| | ||||||||||||||||||| ||    
T  5526226 ggctaaagtgcacttttcccctctaactttcaaaaacttgcaattttggccccctaagtaacaaaaccacaatttagcccccctaagatttagccccatt 5526127  T
Q  320 gca 322  Q
    |||    
T  5526126 gca 5526124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 223 - 322
Target Start/End: Original strand, 8757675 - 8757777
Alignment:
Q  223 ggctaaagtgcactttttcccc-taactttcaaaaacttgtaatttt-ggcccctaagtacaaaaattacaatttt-gccccctaagatttagccccttt 319  Q
    |||||||||||||||||||||| ||||||||||||||||  |||||| | |||||||||||| ||| ||||||||| | ||| |||||||||||||| ||    
T  8757675 ggctaaagtgcactttttccccttaactttcaaaaacttacaattttagccccctaagtacagaaactacaattttggacccttaagatttagccccatt 8757774  T
Q  320 gca 322  Q
    |||    
T  8757775 gca 8757777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 222 - 322
Target Start/End: Original strand, 25684933 - 25685037
Alignment:
Q  222 tggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggccc-ctaagtacaaaaattacaattttg-ccccctaagatttagcccct 317  Q
    |||||||||||||||||| ||||  ||||||||||||||||| ||||||| ||| |||||||| ||||  ||||||| | |||||||||||||||||||     
T  25684933 tggctaaagtgcacttttccccccctaactttcaaaaacttgcaattttgaccctctaagtaccaaaaccacaatttagcccccctaagatttagcccca 25685032  T
Q  318 ttgca 322  Q
    |||||    
T  25685033 ttgca 25685037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 223 - 325
Target Start/End: Original strand, 49306775 - 49306879
Alignment:
Q  223 ggctaaagtgcacttttt-cccctaactttcaaaaacttgtaattttggcc-cctaagtacaaaaattacaattttgccccctaagatttagcccctttg 320  Q
    |||||||||||||||||| |||| |||||||||||||||| ||||||||||   |||||||||||| |||||||||||||  || ||||||| |  ||||    
T  49306775 ggctaaagtgcacttttttcccccaactttcaaaaacttgcaattttggccatttaagtacaaaaactacaattttgcccaatatgatttagtcattttg 49306874  T
Q  321 catct 325  Q
    |||||    
T  49306875 catct 49306879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 221 - 325
Target Start/End: Original strand, 1834117 - 1834226
Alignment:
Q  221 ttggctaaagtgcactttttcccct--aactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg--ccccctaagatttagccc 315  Q
    ||||||||||||||||||| |||||  |||||| ||||||||  ||||||| |||| || ||| ||||| ||||||||||  ||||||||||||||||||    
T  1834117 ttggctaaagtgcacttttccccctctaactttaaaaaacttacaattttgaccccctatgtataaaaactacaattttggcccccctaagatttagccc 1834216  T
Q  316 ctttgcatct 325  Q
     |||||||||    
T  1834217 atttgcatct 1834226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 221 - 322
Target Start/End: Complemental strand, 33310189 - 33310087
Alignment:
Q  221 ttggctaaagtgcactttttcccctaactttcaaaaacttgtaattttggc-ccctaagtacaaaaattacaatttt-gccccctaagatttagcccctt 318  Q
    |||||||||||||||||||| || ||||||| |||||||||||||||| || |||||| |||||||| || |||||| |||| ||| ||||||||| |||    
T  33310189 ttggctaaagtgcacttttttcc-taacttttaaaaacttgtaattttagctccctaaatacaaaaactataattttggccctctatgatttagcctctt 33310091  T
Q  319 tgca 322  Q
    ||||    
T  33310090 tgca 33310087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 223 - 322
Target Start/End: Complemental strand, 48781146 - 48781044
Alignment:
Q  223 ggctaaagtgcactttttcccct--aactttcaaaaacttgtaattttggcccctaagtacaaaaattacaattttg-ccccctaagatttagccccttt 319  Q
    ||||||||||||||||| |||||  |||||||||||| ||| |||||||| |||||||||| ||||  ||||||| | |||||||| |||||||||| ||    
T  48781146 ggctaaagtgcacttttccccctctaactttcaaaaatttgcaattttggtccctaagtactaaaaccacaatttagcccccctaaaatttagccccatt 48781047  T
Q  320 gca 322  Q
    |||    
T  48781046 gca 48781044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 223 - 322
Target Start/End: Complemental strand, 13386634 - 13386530
Alignment:
Q  223 ggctaaagtgcactttttcccc---taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagcccct 317  Q
    ||||||||||||||||||||||   ||||||||||||||||| ||||||| |||| ||||||| ||||  ||||||| | ||||||||||| |||||||     
T  13386634 ggctaaagtgcactttttccccccctaactttcaaaaacttgcaattttgaccccataagtaccaaaaccacaatttagcccccctaagatctagcccca 13386535  T
Q  318 ttgca 322  Q
    |||||    
T  13386534 ttgca 13386530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 226 - 322
Target Start/End: Complemental strand, 8758935 - 8758835
Alignment:
Q  226 taaagtgcactttttcccc--taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagcccctttgc 321  Q
    |||| ||||||||| ||||  ||||||||||||||||| |||||||| |||||||||||| ||| ||||||||| ||||| ||||||||||| || ||||    
T  8758935 taaaatgcacttttccccccttaactttcaaaaacttgcaattttggccccctaagtacagaaactacaattttggccccttaagatttagctccattgc 8758836  T
Q  322 a 322  Q
    |    
T  8758835 a 8758835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 223 - 325
Target Start/End: Original strand, 10447006 - 10447113
Alignment:
Q  223 ggctaaagtgcactttttcccct---aactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttgcccc-ctaagatttagcccct 317  Q
    ||||||||||||||||| |||||   || ||||||||| ||| |||||| ||||| || |||||||||  |||||||| |||| ||||||||||||||||    
T  10447006 ggctaaagtgcacttttccccctcttaagtttcaaaaagttgcaattttagccccctatgtacaaaaaccacaattttacccccctaagatttagcccct 10447105  T
Q  318 ttgcatct 325  Q
    ||||||||    
T  10447106 ttgcatct 10447113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 223 - 333
Target Start/End: Complemental strand, 13509459 - 13509346
Alignment:
Q  223 ggctaaagtgcactttttcccc-taactttcaaaaacttgtaattttggcccct-aagtacaaaaattacaattttgc-cccctaagatttagccccttt 319  Q
    |||||||||| |||||| |||| ||||||| ||||| ||| ||||||||||||  |||||  |||| ||||||||||  |||||||||||||||||||||    
T  13509459 ggctaaagtgtacttttcccccctaacttttaaaaaattgcaattttggccccccaagtatgaaaactacaattttgatcccctaagatttagccccttt 13509360  T
Q  320 gcatctctgctcct 333  Q
    ||| || |||||||    
T  13509359 gcacctttgctcct 13509346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 223 - 322
Target Start/End: Original strand, 48780248 - 48780351
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaattttg-ccccctaagatttagcccctt 318  Q
    ||||||||||||||||| ||||  ||||||| ||||||||| |||||||  ||||||||||| ||||  ||||||| | ||||||||||||||||||| |    
T  48780248 ggctaaagtgcacttttccccccctaacttttaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatttagccccat 48780347  T
Q  319 tgca 322  Q
    ||||    
T  48780348 tgca 48780351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 241 - 322
Target Start/End: Original strand, 5525379 - 5525462
Alignment:
Q  241 cccctaactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaattttg-ccccctaagatttagcccctttgca 322  Q
    ||||||||||||||||||||| |||||||  ||||||||||| ||||  ||||||| | ||||||||||||||||||| |||||    
T  5525379 cccctaactttcaaaaacttgcaattttgaccccctaagtaccaaaaccacaatttagcccccctaagatttagccccattgca 5525462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 245 - 322
Target Start/End: Complemental strand, 46638802 - 46638723
Alignment:
Q  245 taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagcccctttgca 322  Q
    ||||||||||||| ||| |||||||  |||||| | ||||||||||||||||| |||||||||||||||| |||||||||    
T  46638802 taactttcaaaaagttggaattttgatcccctatgaacaaaaattacaattttagccccctaagatttagtccctttgca 46638723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 325
Target Start/End: Complemental strand, 50909776 - 50909667
Alignment:
Q  221 ttggctaaagtgcactttttcc--cctaactttcaaaaacttgtaattttggc-ccctaagtacaaaaattacaattttgccccc--taagatttagccc 315  Q
    ||||||||||||||||||||||  ||||| ||| ||||| |||  |||||| | ||||| ||| ||||| |||||||||| ||||  |||||||||||||    
T  50909776 ttggctaaagtgcactttttccaccctaagttttaaaaagttgcgattttgactccctatgtataaaaactacaattttgacccccttaagatttagccc 50909677  T
Q  316 ctttgcatct 325  Q
    ||||||||||    
T  50909676 ctttgcatct 50909667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 253 - 325
Target Start/End: Complemental strand, 21539140 - 21539066
Alignment:
Q  253 aaaaacttgtaattttggcc-cctaagtacaaaaattacaattttg-ccccctaagatttagcccctttgcatct 325  Q
    ||||||||| |||||||||| |||||||  ||||| |||||||||| |||||||||||||||| |||||||||||    
T  21539140 aaaaacttgcaattttggcctcctaagtgtaaaaactacaattttgaccccctaagatttagctcctttgcatct 21539066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 223 - 321
Target Start/End: Original strand, 14868890 - 14868990
Alignment:
Q  223 ggctaaagtgcactttttcccc-taactttcaaaaacttgtaattttggccc-ctaagtacaaaaattacaattttgccccctaagatttagcccctttg 320  Q
    ||||||||||||||||| |||| || ||||||||| |||| ||||||||||| |||||||  ||||  |||||||  |||||||||| |||||||| |||    
T  14868890 ggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggcccgctaagtatcaaaaccacaatttccccccctaagaattagccccattg 14868989  T
Q  321 c 321  Q
    |    
T  14868990 c 14868990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 223 - 321
Target Start/End: Complemental strand, 14877044 - 14876944
Alignment:
Q  223 ggctaaagtgcactttttcccc-taactttcaaaaacttgtaattttggccc-ctaagtacaaaaattacaattttgccccctaagatttagcccctttg 320  Q
    ||||||||||||||||| |||| || ||||||||| |||| ||||||||||| |||||||  ||||  |||||||  |||||||||| |||||||| |||    
T  14877044 ggctaaagtgcacttttcccccctatctttcaaaatcttgcaattttggcccgctaagtatcaaaaccacaatttccccccctaagaattagccccattg 14876945  T
Q  321 c 321  Q
    |    
T  14876944 c 14876944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 223 - 322
Target Start/End: Complemental strand, 52491708 - 52491605
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagcccctt 318  Q
    |||||||||| |||||| | ||  ||||||||||||||||| |||||||| || |||| |||| ||| ||||||||| ||||||||| |||||||||| |    
T  52491708 ggctaaagtgtacttttccacccttaactttcaaaaacttgcaattttggtcctctaaatacagaaactacaattttggccccctaaaatttagccccat 52491609  T
Q  319 tgca 322  Q
    ||||    
T  52491608 tgca 52491605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 240 - 325
Target Start/End: Complemental strand, 10448342 - 10448255
Alignment:
Q  240 tcccctaactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttgcccc-ctaagatttagcccctttgcatct 325  Q
    |||||||| ||||||||| |||  ||||| ||||| || ||||||||| |||||||||| ||| ||||||| ||||||||||||||||    
T  10448342 tcccctaagtttcaaaaagttgcgattttagccccctatgtacaaaaactacaattttggccctctaagatatagcccctttgcatct 10448255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 226 - 314
Target Start/End: Complemental strand, 35935631 - 35935539
Alignment:
Q  226 taaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaatttt-gccccctaagatttagcc 314  Q
    |||||||||||||  ||||  ||||||| ||||| ||| |||||| ||||| |||||||| ||| ||||||||| ||||||||||||||||||    
T  35935631 taaagtgcactttcccccccttaacttttaaaaatttgcaattttagccccctaagtacataaactacaattttggccccctaagatttagcc 35935539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 296
Target Start/End: Original strand, 26420342 - 26420390
Alignment:
Q  248 ctttcaaaaacttgtaattttggcccctaagtacaaaaattacaatttt 296  Q
    |||||||||||||| |||||||| ||||||||| |||||||| ||||||    
T  26420342 ctttcaaaaacttgcaattttggtccctaagtataaaaattataatttt 26420390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 322
Target Start/End: Complemental strand, 33997892 - 33997852
Alignment:
Q  282 aaaaattacaattttgccccctaagatttagcccctttgca 322  Q
    |||||| | ||||||||||||||||||||||||||||||||    
T  33997892 aaaaatgaaaattttgccccctaagatttagcccctttgca 33997852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 314
Target Start/End: Original strand, 13386014 - 13386111
Alignment:
Q  223 ggctaaagtgcactttttccc--ctaactttc-aaaaacttgtaattttgg-cccctaagtacaaaaattacaatt--ttgccccctaagatttagcc 314  Q
    ||||||||||||||||| |||  ||||||||| ||||||||| |||||||| ||||||||||| ||||  ||||||  |  |||||||||||||||||    
T  13386014 ggctaaagtgcacttttccccctctaactttcaaaaaacttgcaattttggccccctaagtaccaaaaccacaatttatccccccctaagatttagcc 13386111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 322
Target Start/End: Original strand, 21178016 - 21178099
Alignment:
Q  241 cccctaactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaattttg-ccccctaagatttagcccctttgca 322  Q
    ||||||||||||| ||| ||| |||||||  |||||| | ||||||| |||||||||| |||||||| ||||||||| ||||||    
T  21178016 cccctaactttcataaagttgcaattttgatcccctatgaacaaaaactacaattttgaccccctaaaatttagcccttttgca 21178099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 268
Target Start/End: Complemental strand, 55603628 - 55603585
Alignment:
Q  226 taaagtgcactttttcccct-aactttcaaaaacttgtaatttt 268  Q
    |||||||||||||||||||| |||||||||||||||| ||||||    
T  55603628 taaagtgcactttttccccttaactttcaaaaacttgcaatttt 55603585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 226 - 325
Target Start/End: Original strand, 1289100 - 1289203
Alignment:
Q  226 taaagtgcactttttcccc--taactttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaatttt-gccccctaagatttagcccctttgc 321  Q
    ||||||| |||||| ||||  ||||||||||| | |||||||||||  || ||||||| ||||| ||||||||| ||| | ||||||||| |||| ||||    
T  1289100 taaagtgaacttttccccccttaactttcaaatatttgtaattttgatcctctaagtataaaaactacaattttagcctcttaagatttaacccccttgc 1289199  T
Q  322 atct 325  Q
    ||||    
T  1289200 atct 1289203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 223 - 322
Target Start/End: Original strand, 17470 - 17573
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaatttt-gccccctaagatttagcccctt 318  Q
    ||||||||||||||||||||||  ||||||| ||||||||| |||||||||||| |||||||||||| ||||||||| |||||| |||| ||| ||||||    
T  17470 ggctaaagtgcactttttcccccttaacttttaaaaacttgcaattttggccccctaagtacaaaaactacaattttggccccccaagaattatcccctt 17569  T
Q  319 tgca 322  Q
    ||||    
T  17570 tgca 17573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 222 - 322
Target Start/End: Complemental strand, 18878 - 18774
Alignment:
Q  222 tggctaaagtgcactttttcc--cctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagcccct 317  Q
    |||||||||||||||||||||  ||||||||| ||||| ||| |||||||| |||||| ||||||||| || |||||| ||||| ||| ||||||||||     
T  18878 tggctaaagtgcactttttccctcctaacttttaaaaatttgcaattttggtcccctaggtacaaaaactataattttggccccttaaaatttagcccca 18779  T
Q  318 ttgca 322  Q
    |||||    
T  18778 ttgca 18774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 52; Significance: 9e-21; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 221 - 322
Target Start/End: Original strand, 23079 - 23182
Alignment:
Q  221 ttggctaaagtgcactttttcccctaactttcaaaaacttgtaattttggccc-ctaagtacaaaaattacaattttgc-cccctaagatttagcccctt 318  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||| ||| |||||||| ||||  ||||| |||| |||||||| ||||||||| |    
T  23079 ttggctaaagtgcacttttccccctaactttcaaaaacttgcaattttgtccctctaagtaccaaaacaacaatcttgctcccctaagctttagccccat 23178  T
Q  319 tgca 322  Q
    ||||    
T  23179 tgca 23182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 271
Target Start/End: Complemental strand, 23991 - 23941
Alignment:
Q  223 ggctaaagtgcactttttcc--cctaactttcaaaaacttgtaattttggc 271  Q
    |||||||||||||||||| |  ||||||||||||||||||| |||||||||    
T  23991 ggctaaagtgcacttttttctccctaactttcaaaaacttgcaattttggc 23941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 223 - 316
Target Start/End: Complemental strand, 5539 - 5442
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccct-aagtacaaaaattacaattttgccccc-taagatttagcccc 316  Q
    ||||||||||||||||| ||||  ||| ||||||||||||| ||||||| ||||| ||||||||||| ||||||||||||||| ||||||||||||||    
T  5539 ggctaaagtgcacttttccccccctaattttcaaaaacttgcaattttgaccccttaagtacaaaaactacaattttgcccccttaagatttagcccc 5442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 223 - 316
Target Start/End: Original strand, 4442 - 4539
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccct-aagtacaaaaattacaatttt-gccccctaagatttagcccc 316  Q
    ||||||||||||| ||||||||  ||| ||||||||||||  |||||| |||||| |||||||||||||||||||||  |||||||| ||||||||||    
T  4442 ggctaaagtgcacattttcccccctaattttcaaaaacttacaattttagccccttaagtacaaaaattacaattttacccccctaaaatttagcccc 4539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 221 - 325
Target Start/End: Original strand, 60088 - 60196
Alignment:
Q  221 ttggctaaagtgcactttt--tcccctaactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagcccc 316  Q
    |||||||||||||||||||  ||| |||||||| ||||||||| ||||||| |||| || ||| ||||| |||||||||| ||||||| |||||||||||    
T  60088 ttggctaaagtgcacttttcctcctctaacttttaaaaacttgcaattttgaccccctatgtataaaaactacaattttgaccccctatgatttagcccc 60187  T
Q  317 tttgcatct 325  Q
    |||||||||    
T  60188 tttgcatct 60196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 224 - 325
Target Start/End: Complemental strand, 61559 - 61454
Alignment:
Q  224 gctaaagtgcactttt--tcccctaactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaatttt-gccccctaagatttagccccttt 319  Q
    ||||||||||||||||  |||| ||| ||||||||||||| |||||| ||||| |||||||||||| || |||||| |||||||| |||||||||| |||    
T  61559 gctaaagtgcacttttcctcccttaattttcaaaaacttgcaattttagccccctaagtacaaaaactataattttggccccctatgatttagccctttt 61460  T
Q  320 gcatct 325  Q
    ||||||    
T  61459 gcatct 61454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 47; Significance: 8e-18; HSPs: 2)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 223 - 315
Target Start/End: Complemental strand, 9126 - 9032
Alignment:
Q  223 ggctaaagtgcactttttcc-cctaactttcaaaaacttgtaattttggcc-cctaagtacaaaaattacaattttgccccctaagatttagccc 315  Q
    |||||||||||||||||||| ||| | ||||||||| |||| ||||| ||| |||| ||||||||| |||||||||| |||||||||||||||||    
T  9126 ggctaaagtgcactttttcctccttaatttcaaaaagttgtgatttttgcctcctatgtacaaaaactacaattttggcccctaagatttagccc 9032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 271 - 325
Target Start/End: Original strand, 6394 - 6449
Alignment:
Q  271 cccctaagtacaaaaattacaattttg-ccccctaagatttagcccctttgcatct 325  Q
    |||||| ||||||||| |||||||||| |||||||||||||||||  |||||||||    
T  6394 cccctatgtacaaaaactacaattttgaccccctaagatttagcctttttgcatct 6449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 223 - 325
Target Start/End: Original strand, 19488 - 19594
Alignment:
Q  223 ggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttgc-cccctaagatttagcccctt 318  Q
    |||||||||||| |||| ||||  ||| |||||||| |||| |||||||||||| |||||| ||||| ||||||||||  ||||||||||||| ||||||    
T  19488 ggctaaagtgcatttttccccccttaattttcaaaaccttgcaattttggccccctaagtataaaaactacaattttgatcccctaagatttaacccctt 19587  T
Q  319 tgcatct 325  Q
    |||||||    
T  19588 tgcatct 19594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 217 - 313
Target Start/End: Complemental strand, 2571 - 2472
Alignment:
Q  217 tatattggctaaagtgcactttttcccctaactttca-aaaacttgtaattttg-gcccctaagtacaaaaattacaatttt-gccccctaagatttagc 313  Q
    |||||| |||||||||||||||| ||||||||||||| |||||||| |||||||  ||||||||||||||||  || ||||| |||||||| ||||||||    
T  2571 tatattagctaaagtgcacttttccccctaactttcaaaaaacttgcaattttgaccccctaagtacaaaaacaaccattttggccccctacgatttagc 2472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 217 - 313
Target Start/End: Complemental strand, 7194 - 7095
Alignment:
Q  217 tatattggctaaagtgcactttttcccctaactttca-aaaacttgtaattttg-gcccctaagtacaaaaattacaatttt-gccccctaagatttagc 313  Q
    |||||| |||||||||||||||| ||||||||||||| |||||||| |||||||  ||||||||||||||||  || ||||| |||||||| ||||||||    
T  7194 tatattagctaaagtgcacttttccccctaactttcaaaaaacttgcaattttgaccccctaagtacaaaaacaaccattttggccccctacgatttagc 7095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold2034
Description:

Target: scaffold2034; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 222 - 323
Target Start/End: Original strand, 232 - 337
Alignment:
Q  222 tggctaaagtgcactttttcccc--taactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttgc-cccctaagatttagcccct 317  Q
    |||||||||||||||||  ||||  ||||||||||||| ||| |||||||| |||||| ||||||||| || |||||||  ||||||||| |||||||||    
T  232 tggctaaagtgcactttcccccccttaactttcaaaaagttgcaattttggtcccctatgtacaaaaactataattttggtcccctaagaattagcccct 331  T
Q  318 ttgcat 323  Q
    ||||||    
T  332 ttgcat 337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2034; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 323
Target Start/End: Complemental strand, 1055 - 975
Alignment:
Q  245 taactttcaaaaacttgtaattttggcccctaa-gtacaaaaattacaattttg-ccccctaagatttagcccctttgcat 323  Q
    ||||||| ||||| ||| |||||||| |||| | ||||||||| || ||||||| ||||| |||| |||||||||||||||    
T  1055 taacttttaaaaagttgcaattttggtcccttatgtacaaaaactataattttggccccccaagaattagcccctttgcat 975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 223 - 322
Target Start/End: Complemental strand, 3408 - 3306
Alignment:
Q  223 ggctaaagtgcactttttcccc-taactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttgc-cccctaagatttagccccttt 319  Q
    ||||||||||||||||| |||| | ||||||||||||||  ||||||| |||| || ||||||||| || |||||||  |||||||||||||||||||||    
T  3408 ggctaaagtgcacttttccccccttactttcaaaaacttacaattttgaccccataggtacaaaaactataattttggtcccctaagatttagccccttt 3309  T
Q  320 gca 322  Q
    |||    
T  3308 gca 3306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 217 - 316
Target Start/End: Original strand, 37142 - 37244
Alignment:
Q  217 tatattggctaaagtgcactttttcccctaac-tttcaaaaacttgtaattttg-gcccctaagtacaaaaattacaatttt-gccccctaagatttagc 313  Q
    ||||||||||||||||||||||| |||||| | ||| ||||| ||| |||||||  ||||||||||||||||  |||||||| |||||||| ||||||||    
T  37142 tatattggctaaagtgcacttttccccctatcttttaaaaaatttgcaattttgaccccctaagtacaaaaacaacaattttggccccctacgatttagc 37241  T
Q  314 ccc 316  Q
    |||    
T  37242 ccc 37244  T

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Target: scaffold0112; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 273 - 316
Target Start/End: Complemental strand, 40684 - 40641
Alignment:
Q  273 cctaagtacaaaaattacaattttgccccctaagatttagcccc 316  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||    
T  40684 cctaagtacaaaaataacaattttgtcccctaagatttagcccc 40641  T

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Target: scaffold1303 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold1303
Description:

Target: scaffold1303; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 325
Target Start/End: Original strand, 1439 - 1545
Alignment:
Q  223 ggctaaagtgcactttttcccct--aactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagcccctt 318  Q
    |||||||||| |||||| |||||  |||||| ||||||||| ||||||| |||| || ||| ||||| || ||||||| |||||||||||||||||| ||    
T  1439 ggctaaagtgtacttttccccctctaactttaaaaaacttgcaattttgaccccctatgtataaaaactataattttgaccccctaagatttagcccatt 1538  T
Q  319 tgcatct 325  Q
    |||||||    
T  1539 tgcatct 1545  T

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Target: scaffold0369 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 223 - 311
Target Start/End: Original strand, 13193 - 13283
Alignment:
Q  223 ggctaaagtgcactttttcccctaactttcaaaaacttgtaattttggcc-cctaagtacaaaaattacaa-ttttgccccctaagattta 311  Q
    ||||||||||||||||| ||||||||||| ||||| |||| |||||| || |||| |||| |||| ||||| ||||| |||||||||||||    
T  13193 ggctaaagtgcacttttccccctaactttgaaaaagttgtgattttgacctcctatgtacgaaaactacaatttttgtcccctaagattta 13283  T

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Target: scaffold0059 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 236 - 314
Target Start/End: Original strand, 3690 - 3770
Alignment:
Q  236 tttttcccctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaatttt-gccccctaagatttagcc 314  Q
    |||||||||||||||||||||||||| |||||||| ||||| |||| | ||| || |||||| | ||||||||||||||||    
T  3690 tttttcccctaactttcaaaaacttgcaattttggccccctgagtaaagaaactataattttagtcccctaagatttagcc 3770  T

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Target: scaffold0059; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 322
Target Start/End: Complemental strand, 4829 - 4728
Alignment:
Q  224 gctaaagtgcactttttc-ccctaactttcaaaaacttgtaattttgg-cccctaagtacaaaaattacaattttg-ccccctaagatttagcccctttg 320  Q
    |||||||||||||||  | |||||||||| |||||| || |||||||| ||||||| |||| ||| |||||||||| ||| ||||  ||||||||| |||    
T  4829 gctaaagtgcactttccctccctaacttttaaaaacatgcaattttggccccctaaatacagaaactacaattttgaccctctaaattttagccccattg 4730  T
Q  321 ca 322  Q
    ||    
T  4729 ca 4728  T

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Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 322
Target Start/End: Complemental strand, 49534 - 49431
Alignment:
Q  223 ggctaaagtgcactttt-tcccct-aactttcaaaaacttgtaattttggcccc-taagtacaaaaattacaattttg-ccccctaagatttagcccctt 318  Q
    ||||||||||||||||| |||||| |||||| ||||| ||| |||||||||||| ||   | ||||| |||||||||| |||||||||||||||| ||||    
T  49534 ggctaaagtgcacttttctccccttaactttaaaaaagttgcaattttggccccctataaataaaaactacaattttgaccccctaagatttagctcctt 49435  T
Q  319 tgca 322  Q
    ||||    
T  49434 tgca 49431  T

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Target: scaffold0049 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 7465 - 7413
Alignment:
Q  271 cccctaagtacaaaaattacaattttg-ccccctaagatttagcccctttgca 322  Q
    |||||| ||||| ||| |||||||||| |||||||||||||||||||||||||    
T  7465 cccctatgtacagaaactacaattttgaccccctaagatttagcccctttgca 7413  T

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Target: scaffold0045 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 325
Target Start/End: Original strand, 48334 - 48413
Alignment:
Q  246 aactttcaaaaacttgtaattttggcccctaagtacaaaaattacaattttgc-cccctaagatttagcccctttgcatct 325  Q
    |||| ||||||||||| ||||| | |||||| ||||||||| || |||||||  |||||||||||||  ||||||||||||    
T  48334 aactctcaaaaacttgcaattt-gacccctatgtacaaaaactataattttggtcccctaagatttattccctttgcatct 48413  T

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