View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10297_low_7 (Length: 325)
Name: NF10297_low_7
Description: NF10297
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10297_low_7 |
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Alignment Details
Target: chr5 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 20 - 293
Target Start/End: Complemental strand, 40325418 - 40325145
Alignment:
| Q |
20 |
ttaacatgatctcggtttgaaatcaccttcatcttttcgctttccacattttttattgttttgcgagcccgattgtcacgtcgttcgtcgatttggctta |
119 |
Q |
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| T |
40325418 |
ttaacatgatctcggtttgaaatcaccttcatcttttcgctttccacattttttattgttttgcgagcccgattgtcacgtcgttcgtcgatttggctta |
40325319 |
T |
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| Q |
120 |
ccagaatacaagttccgactaagcaagtagcaattatggattgtttgtaagtagtaataaatccagtgggaaggtaatctgaaaataatcaatataaatt |
219 |
Q |
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| T |
40325318 |
ccagaatacaagttccgactaagcaagtagcaattatggattgtttgtaagtagtaataaatccagtgggaagataatctgaaaataatcaatataaatt |
40325219 |
T |
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| Q |
220 |
tcagtggtagatttaaaaaagataaattactatataaatggaatttagctatgccttcagtgataattgttttg |
293 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40325218 |
tcagtggtagatttaataaagataaattactatataaatggaatttagctatgccttcagtgataattgttttg |
40325145 |
T |
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