View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10298_low_1 (Length: 810)
Name: NF10298_low_1
Description: NF10298
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10298_low_1 |
 | |
|
Alignment Details
Target: chr6 (Bit Score: 580; Significance: 0; HSPs: 22)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 580; E-Value: 0
Query Start/End: Original strand, 8 - 595
Target Start/End: Complemental strand, 23252078 - 23251491
Alignment:
| Q |
8 |
aaataaatgggtttgtgaaatgagggagccgaacacaaagaataggatttggctaggaacttttccaacagccgagatggcagcccgagcccacgatgtt |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23252078 |
aaataaatgggtttgtgaaatgagggagccgaacacaaagaataggatttggctaggaacttttccaacagccgagatggcagcccgagcccacgatgtt |
23251979 |
T |
|
| Q |
108 |
gccgcgatagcattgaggggccgctatgcctgtctcaattttgcagactcggtgtggcgccttcctattccagcaacttccgcgataaaagatattcaaa |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23251978 |
gccgcgatagcattgaggggccgctatgcctgtctcaattttgcagactcggtgtggcgccttcctattccagcaacttccgcgataaaagatattcaaa |
23251879 |
T |
|
| Q |
208 |
aggcagctacaaaagccgccgaagcttttagaccagacaatactttaatgaccggtgacattgacaccgttgtagctgttgtcgcaacacaggagctgaa |
307 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23251878 |
aggcagctacaaaagccgccgaagcttttagaccagacaatactttaatgaccagtgacattgacaccgttgtagctgttgtcgcaacacaggagctgaa |
23251779 |
T |
|
| Q |
308 |
tatgtttcgtgttgaagtcgaagaagaggaaatgttgaatatgccagagttgtggaggaatatggcactaatgtcccctacacatagctttgggtatcat |
407 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23251778 |
tatgtttcgtgttgaagtcgaagaagaggaagtgttgaatatgccagagttgtggaggaatatggcactaatgtcccctacacatagctttgggtatcat |
23251679 |
T |
|
| Q |
408 |
gatcagtatgaagatattcatatacaagactttcaagatgatgaggtatcactatggaacttttaaatttaattgatttggttttacatttatttttgga |
507 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23251678 |
gatcagtatgaagatattcatatacaagactttcaagatgatgaggtatcactatggaacttttaaatttaattgatttggttttacatttatttttgga |
23251579 |
T |
|
| Q |
508 |
ttgtagaataggaaatgtctatactacaaccgtttgaattggtagcgtaaactctgcatatacataggttgaatttgaaaaggaattt |
595 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23251578 |
ttgtagaataggaaatgtctatactacaaccgtttgaattggtagcgtaaactctgcatatacataggttgaatttgaaaaggaattt |
23251491 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 376; E-Value: 0
Query Start/End: Original strand, 10 - 596
Target Start/End: Complemental strand, 23258052 - 23257464
Alignment:
| Q |
10 |
ataaatgggtttgtgaaatgagggagccgaacacaaagaataggatttggctaggaacttttccaacagccgagatggcagcccgagcccacgatgttgc |
109 |
Q |
| |
|
|||||||||| |||||||||||||| || |||||||||| ||||||||||| || |||||||||||| |||| |||||||||||||||||||||||||| |
|
|
| T |
23258052 |
ataaatgggtgtgtgaaatgagggaacccaacacaaagaccaggatttggctggggacttttccaacacccgaaatggcagcccgagcccacgatgttgc |
23257953 |
T |
|
| Q |
110 |
cgcgatagcattgaggggccgctatgcctgtctcaattttgcagactcggtgtggcgccttcctattccagcaacttccgcgataaaagatattcaaaag |
209 |
Q |
| |
|
||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23257952 |
cgcaatggcattgaggggccgctatgcctgtctcaattttgcagactcggtgtggcgccttcctattccagcaacttccgcgataaaagatattcaaaag |
23257853 |
T |
|
| Q |
210 |
gcagctacaaaagccgccgaagcttttagaccagacaatactttaatgaccggtgacattgacaccgttgtagctgttgtcgcaacacaggagctgaata |
309 |
Q |
| |
|
|| ||| | |||| ||||||||||||||||||||||| |||||||||| ||| ||||||||||| ||| |||| || || ||| ||||| |||||| |
|
|
| T |
23257852 |
gcggctgctgaagctgccgaagcttttagaccagacaagactttaatgattaatgatattgacaccgtagtacctgtcgtggccacaaaggagttgaata |
23257753 |
T |
|
| Q |
310 |
tgtttcgtgttgaagtcgaagaag---aggaaatgttgaatatgccagagttgtggaggaatatggcactaatgtcccctacacatagctttgggtatca |
406 |
Q |
| |
|
||||| |||| ||||||||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
23257752 |
tgttttgtgtggaagtcgaagaagagcaggaaatgttgaatatgccagaattgttgaggaatatggcactaatgtcccctacacatagctttgagtatca |
23257653 |
T |
|
| Q |
407 |
tgatcagtatgaagatattcatatacaagactttcaagatgatgaggtatcactatggaacttttaaatttaattgatttggttttacatttatttttgg |
506 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||| |||| ||||||||||| |
|
|
| T |
23257652 |
tgatcagtatgaagatattcatgtacaagactttcaagatgatgaggtatcactatggaacttctaaacttaatgtgtttgg-tttaattttatttttgg |
23257554 |
T |
|
| Q |
507 |
attgtagaataggaaatgtctatactacaaccgtttgaattggtagcgtaaactctgcatatacataggttgaatttgaaaaggaatttc |
596 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| |||||||||| |||| ||||||||||||||||||||| |||||||||| |||| |
|
|
| T |
23257553 |
attgtagaataggaaatgtctatactacaacctttttaattggtagcataaattctgcatatacataggttgaaattgaaaaggagtttc |
23257464 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 355; E-Value: 0
Query Start/End: Original strand, 10 - 558
Target Start/End: Complemental strand, 23266607 - 23266063
Alignment:
| Q |
10 |
ataaatgggtttgtgaaatgagggagccgaacacaaagaataggatttggctaggaacttttccaacagccgagatggcagcccgagcccacgatgttgc |
109 |
Q |
| |
|
||||||||||||||||||||||||| || ||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23266607 |
ataaatgggtttgtgaaatgagggaacccaacacgaagactagaatttggctaggaacttttccaacagccgagatggcagcccgagcccacgatgttgc |
23266508 |
T |
|
| Q |
110 |
cgcgatagcattgaggggccgctatgcctgtctcaattttgcagactcggtgtggcgccttcctattccagcaacttccgcgataaaagatattcaaaag |
209 |
Q |
| |
|
||||| ||||||||||| ||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||| | |||||||||||||||||| |
|
|
| T |
23266507 |
tgcgatggcattgaggggtcgctacgcctgtctcaattttgcagattcggtgtggcggcttcctattccagcaacttcctcaataaaagatattcaaaag |
23266408 |
T |
|
| Q |
210 |
gcagctacaaaagccgccgaagcttttagaccagacaatactttaatgaccggtgacattgacaccgttgtagctgttgtcgcaacacaggagctgaata |
309 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| || ||||||||||||||||| ||| ||||| |||||| |
|
|
| T |
23266407 |
gcagctacaaaagccgccgaagcttttagaccagacaatactataatgattaccaacattgagactgttgtagctgttgtcgccacaaaggagttgaata |
23266308 |
T |
|
| Q |
310 |
tgtttcgtgttgaagtcgaagaagaggaaatgttgaatatgccagagttgtggaggaatatggcactaatgtcccctacacatagctttgggtatcatga |
409 |
Q |
| |
|
||||| |||| ||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
23266307 |
tgttttgtgtggaa---gaagaagaggaaatgttgaatatgccggagttttggaggaatatggcactaatgtcccctacacatagctttgagtatcatga |
23266211 |
T |
|
| Q |
410 |
tcagtatgaagatattcatatacaagactttcaagatgatgaggtatcactatggaacttttaaatttaattgatttggttttacatttatttttggatt |
509 |
Q |
| |
|
||| ||||||||| ||||| | |||||||||||||||||||||||||||||||||||||| ||||||| || |||||||| || |||||||||||||| |
|
|
| T |
23266210 |
tcaatatgaagattttcattttcaagactttcaagatgatgaggtatcactatggaacttctaaattttctttgtttggtttaac-tttatttttggatt |
23266112 |
T |
|
| Q |
510 |
gtagaataggaaatgtctatactacaaccgtttgaattggtagcgtaaa |
558 |
Q |
| |
|
||||||||||||||||||||||||||||| ||| |||||||||| |||| |
|
|
| T |
23266111 |
gtagaataggaaatgtctatactacaacctttttaattggtagcataaa |
23266063 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 352; E-Value: 0
Query Start/End: Original strand, 8 - 596
Target Start/End: Complemental strand, 23247666 - 23247079
Alignment:
| Q |
8 |
aaataaatgggtttgtgaaatgagggagccgaacacaaagaataggatttggctaggaacttttccaacagccgagatggcagcccgagcccacgatgtt |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||||||| |||||||||||||||||| |
|
|
| T |
23247666 |
aaataaatgggtttgtgaaatgagggagccgaacacaaagaataggatttggctgggaacttttccaacaccggagatggctgcccgagcccacgatgtt |
23247567 |
T |
|
| Q |
108 |
gccgcgatagcattgaggggccgctatgcctgtctcaattttgcagactcggtgtggcgccttcctattccagcaacttccgcgataaaagatattcaaa |
207 |
Q |
| |
|
|| || || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
23247566 |
gctgcaatggcattgaggggccgctatgcctgtctcaatttctcagactcggtgtggcgccttcctattccagcaacttccgcaataaaagatattcaaa |
23247467 |
T |
|
| Q |
208 |
aggcagctacaaaagccgccgaagcttttagaccagacaatactttaatgaccggtgacattgacaccgttgtagctgttgtcgcaacacaggagctgaa |
307 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||| | |||| ||| ||||| ||| |||||||||| |
|
|
| T |
23247466 |
aggcagctacaaaagcggccgaagcttttagaccagacaatactttaatgactaacaatattgacactatcgtagatgtcgtcgccacaaaggagctgaa |
23247367 |
T |
|
| Q |
308 |
tatgtttcgtgttgaagtcgaagaa---gaggaaatgttgaatatgccagagttgtggaggaatatggcactaatgtcccctacacatagctttgggtat |
404 |
Q |
| |
|
||||||| |||| ||||| || ||| ||||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||| |||| |
|
|
| T |
23247366 |
tatgttttgtgtggaagttgatgaacaggaggaaatgttgaatatgccagagttgtggaggaatatggcgttgatgtcacctacacatagctttgagtat |
23247267 |
T |
|
| Q |
405 |
catgatcagtatgaagatattcatatacaagactttcaagatgatgaggtatcactatggaacttttaaatttaattgatttggttttacatttattttt |
504 |
Q |
| |
|
|||| ||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| | ||||| ||| ||||| |
|
|
| T |
23247266 |
catg---agtatgacgatattcatgtacaagattttcaagatgatgaggtatcactatggaacttttaaatttaatgtcttttg-tttacttttcttttt |
23247171 |
T |
|
| Q |
505 |
ggattgtagaataggaaatgtctatactacaaccgtttgaattggtagcgtaaactctgcatatacataggttgaatttgaaaaggaatttc |
596 |
Q |
| |
|
||||||||| |||||||||||||||||||||||| ||| |||||||||| |||| ||||||||||||||||| || || |||||||||||| |
|
|
| T |
23247170 |
ggattgtaggataggaaatgtctatactacaacctttttaattggtagcataaatactgcatatacataggttaaaattaaaaaggaatttc |
23247079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 595 - 772
Target Start/End: Complemental strand, 23251453 - 23251276
Alignment:
| Q |
595 |
tcaagcgtaaagtgcatctcatcctttttattatatatgaaagaaaatataattttggaatttcagctattgatatagaaaatataatctattgccatct |
694 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23251453 |
tcaagcgtaaagtgcatctcatcctttttattatatatgaaagaaaatataattttggaatttcagctattgatatagaaaatataatctattgccatct |
23251354 |
T |
|
| Q |
695 |
ttgcttagcctgtattaagttgaaggaggtaatacggtgtctcttgtcttattcttctcttctcttttgtaggacttt |
772 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23251353 |
ttgcttagcctgtattaagttgaagaaggtaatacggtgtctcttgtcttattcttctcttctcttttgtaggacttt |
23251276 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 118; E-Value: 9e-60
Query Start/End: Original strand, 10 - 291
Target Start/End: Complemental strand, 23283725 - 23283444
Alignment:
| Q |
10 |
ataaatgggtttgtgaaatgagggagccgaacacaaagaataggatttggctaggaacttttccaacagccgagatggcagcccgagcccacgatgttgc |
109 |
Q |
| |
|
||||||||||||||||||||||||| || |||| ||||| ||||||||||||||| ||||||||||| || |||||||| || ||||| ||||| ||||| |
|
|
| T |
23283725 |
ataaatgggtttgtgaaatgagggaacccaacaaaaagactaggatttggctagggacttttccaacggctgagatggctgcacgagcacacgacgttgc |
23283626 |
T |
|
| Q |
110 |
cgcgatagcattgaggggccgctatgcctgtctcaattttgcagactcggtgtggcgccttcctattccagcaacttccgcgataaaagatattcaaaag |
209 |
Q |
| |
|
|| || ||||| ||||||||||||||||||||||| |||||||||||||||||| | ||||||||||| || | | | |||||| ||||||| | |
|
|
| T |
23283625 |
agccatggcattaaggggccgctatgcctgtctcaactttgcagactcggtgtggaggcttcctattcctgcctccgctgaagcaaaagacattcaaagg |
23283526 |
T |
|
| Q |
210 |
gcagctacaaaagccgccgaagcttttagaccagacaatactttaatgaccggtgacattgacaccgttgtagctgttgtcg |
291 |
Q |
| |
|
|||||| || |||||||||| ||||| ||||||||||| ||||||||||| ||||||||||||||||| ||||| |||| |
|
|
| T |
23283525 |
gcagctgcagaagccgccgaggctttcagaccagacaagactttaatgactaacgacattgacaccgttgtggctgtcgtcg |
23283444 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 10 - 469
Target Start/End: Complemental strand, 23290038 - 23289570
Alignment:
| Q |
10 |
ataaatgggtttgtgaaatgagggagccgaacacaaagaataggatttggctaggaacttttccaacagccgagatggcagcccgagcccacgatgttgc |
109 |
Q |
| |
|
|||||||||| |||||||||||||| || || | |||| ||||||||||||||| |||||| |||||||||||||||| ||||| || ||||| ||||| |
|
|
| T |
23290038 |
ataaatgggtgtgtgaaatgagggaaccaaataagaagactaggatttggctagggacttttgcaacagccgagatggctgcccgtgcacacgacgttgc |
23289939 |
T |
|
| Q |
110 |
cgcgatagcattgaggggccgctatgcctgtctcaattttgcagactcggtgtggcgccttcctattccagcaacttccgcgataaaagatattcaaaag |
209 |
Q |
| |
|
|| || ||||||||||||||||| ||||||||||| ||||||||||||| |||| ||||||||||| || | | | |||||| ||||||| | |
|
|
| T |
23289938 |
agcaattgcattgaggggccgctacgcctgtctcaactttgcagactcggcgtggaagcttcctattcctgcctccgctgaagcaaaagacattcaaagg |
23289839 |
T |
|
| Q |
210 |
gcagctacaaaagccgccgaagcttttagaccagacaatactttaatgaccggtgacattgacaccgttgtagctgttgtc---------gcaacacagg |
300 |
Q |
| |
|
|||||| | ||||||| || ||||| ||||||||||| ||||||||||| || ||||||||| ||||| ||||||||| | | | ||| |
|
|
| T |
23289838 |
gcagctggagaagccgctgaggctttcagaccagacaagactttaatgactactggcattgacacggttgtggctgttgtcgttgcggtggaagaagagg |
23289739 |
T |
|
| Q |
301 |
a------gctgaatatgtttcgtgttgaagtcg---aagaagaggaaatgttgaatatgccagagttgtggaggaatatggcactaatgtcccctacaca |
391 |
Q |
| |
|
| | ||||||||||| |||| ||||||| ||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
23289738 |
aagaagtgttgaatatgttttgtgtggaagtcgaaaaagaagaggaagtgttgaatatgcaagagttgtggaaaaatatggcactaatgtcccctacaca |
23289639 |
T |
|
| Q |
392 |
tagctttgggtatcatgatcagtatgaagatattcatatacaagactttcaagatgatgaggtatcactatggaactt |
469 |
Q |
| |
|
||| |||| | |||| ||||||||||| || || ||||| ||||||||||| |||||||| ||||||||||| |
|
|
| T |
23289638 |
tagttttg---agcatg---agtatgaagattttgatgtacaa---tttcaagatgaagaggtatcgctatggaactt |
23289570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 620 - 772
Target Start/End: Complemental strand, 23266001 - 23265846
Alignment:
| Q |
620 |
ttttattatatatgaaagaa-aatataattttggaatttcagctattgatatagaaaatataatctattgccatctttgcttagcctgtat--taagttg |
716 |
Q |
| |
|
|||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| || || ||||||| |
|
|
| T |
23266001 |
ttttattatatatgaaagaagaatataactttggaatttcagcttttgatatagaaaatataatctattgccatccttgcttagcttgcattataagttg |
23265902 |
T |
|
| Q |
717 |
aaggaggtaatacggtgtctcttgtcttattcttctcttctcttttgtaggacttt |
772 |
Q |
| |
|
|| ||||||||| | |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23265901 |
aaagaggtaatatagcgtctcttgtcttattcttctcttctcttttgtaggacttt |
23265846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 10 - 259
Target Start/End: Complemental strand, 23587194 - 23586945
Alignment:
| Q |
10 |
ataaatgggtttgtgaaatgagggagccgaacacaaagaataggatttggctaggaacttttccaacagccgagatggcagcccgagcccacgatgttgc |
109 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| |||| || |||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||| |
|
|
| T |
23587194 |
ataaatgggtttgtgaaatgagggagcctaacaagaagactaagatttggctagggacttttccaactgccgagatggcagcccgtgcccacgatgttgc |
23587095 |
T |
|
| Q |
110 |
cgcgatagcattgaggggccgctatgcctgtctcaattttgcagactcggtgtggcgccttcctattccagcaacttccgcgataaaagatattcaaaag |
209 |
Q |
| |
|
|| || ||||||||||||||||| || |||||||| ||||||||||| | |||||| || || | || |||||| | ||| ||||| |||||| |
|
|
| T |
23587094 |
tgcaatggcattgaggggccgctacgcttgtctcaactttgcagactcagcgtggcggctccccaaacctgcaactactcaagcaaaggatatacaaaag |
23586995 |
T |
|
| Q |
210 |
gcagctacaaaagccgccgaagcttttagaccagacaatactttaatgac |
259 |
Q |
| |
|
|| |||||| | |||||||| ||||| ||||||||||| |||||| |||| |
|
|
| T |
23586994 |
gctgctacagaggccgccgaggctttcagaccagacaagactttattgac |
23586945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 10 - 274
Target Start/End: Complemental strand, 23391507 - 23391243
Alignment:
| Q |
10 |
ataaatgggtttgtgaaatgagggagccgaacacaaagaataggatttggctaggaacttttccaacagccgagatggcagcccgagcccacgatgttgc |
109 |
Q |
| |
|
|||||||||| |||||||||||||| || || | |||| || ||||||||||| ||||||||||| || ||||||||||||||||| || |||||||| |
|
|
| T |
23391507 |
ataaatgggtgtgtgaaatgagggaaccaaataagaagactaaaatttggctaggcacttttccaactgcggagatggcagcccgagcacatgatgttgc |
23391408 |
T |
|
| Q |
110 |
cgcgatagcattgaggggccgctatgcctgtctcaattttgcagactcggtgtggcgccttcctattccagcaacttccgcgataaaagatattcaaaag |
209 |
Q |
| |
|
||| || ||||||||||||||||| ||||||||||| ||||||||||| | |||||| || ||||| || || || | | ||||||||| |||||| |
|
|
| T |
23391407 |
cgcaatggcattgaggggccgctacgcctgtctcaactttgcagactccgcgtggcggctccctatacctgccaccactcaggcaaaagatatacaaaag |
23391308 |
T |
|
| Q |
210 |
gcagctacaaaagccgccgaagcttttagaccagacaatactttaatgaccggtgacattgacac |
274 |
Q |
| |
|
|| ||| || | ||||| || ||||| ||||||||||| |||| ||| || |||||||||||| |
|
|
| T |
23391307 |
gcggctgcacaggccgctgaggctttcagaccagacaagacttcaattactaatgacattgacac |
23391243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 304 - 536
Target Start/End: Complemental strand, 23283389 - 23283160
Alignment:
| Q |
304 |
tgaatatgtttcgtgttgaagtcgaa---gaagaggaaatgttgaatatgccagagttgtggaggaatatggcactaatgtcccctacacatagctttgg |
400 |
Q |
| |
|
||||||||||| |||| ||||||||| ||||||||| ||||||||||| ||||| |||||||||||||||| ||||||||||||||||||| | ||| |
|
|
| T |
23283389 |
tgaatatgttttgtgtggaagtcgaaaaagaagaggaagtgttgaatatgtcagagatgtggaggaatatggcgttaatgtcccctacacatag-tatgg |
23283291 |
T |
|
| Q |
401 |
gtatcatgatcagtatgaagatattcatatacaagactttcaagatgatgaggtatcactatggaacttttaaatttaattgatttggttttacatttat |
500 |
Q |
| |
|
| |||| |||||||| || || || ||||||||||||||||||| |||||||| ||||||||||| |||| || | ||||||||| ||| | |
|
|
| T |
23283290 |
--agcatg---agtatgaaaattttgatttacaagactttcaagatgaagaggtatccctatggaacttctaaaattgaagagtttggttttgttttttt |
23283196 |
T |
|
| Q |
501 |
ttttggattgtagaataggaaatgtctatactacaa |
536 |
Q |
| |
|
|||||||||||||||| | ||||||||||||||||| |
|
|
| T |
23283195 |
ttttggattgtagaattgaaaatgtctatactacaa |
23283160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 10 - 157
Target Start/End: Complemental strand, 23583310 - 23583164
Alignment:
| Q |
10 |
ataaatgggtttgtgaaatgagggagccgaacacaaagaataggatttggctaggaacttttccaacagccgagatggcagcccgagcccacgatgttgc |
109 |
Q |
| |
|
||||||||||||||||||||||| |||| |||| |||| || |||||||||||| ||||||||||| || ||||||||| |||| |||||||||||||| |
|
|
| T |
23583310 |
ataaatgggtttgtgaaatgaggaagcctaacaagaagactaagatttggctagggacttttccaactgcggagatggcaacccgtgcccacgatgttgc |
23583211 |
T |
|
| Q |
110 |
cgcgatagcattgaggggccgctatgcctgtctcaattttgcagactc |
157 |
Q |
| |
|
|| || ||||||| ||||||||| ||||||||||| ||||||||||| |
|
|
| T |
23583210 |
tgcaatggcattga-gggccgctacgcctgtctcaactttgcagactc |
23583164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 10 - 397
Target Start/End: Complemental strand, 23634228 - 23633835
Alignment:
| Q |
10 |
ataaatgggtttgtgaaatgagggagccgaacacaaagaataggatttggctaggaacttttccaacagccgagatggcagcccgagcccacgatgttgc |
109 |
Q |
| |
|
|||||||||| ||||||||||||||||| |||| |||| || |||||||||||| ||||||||||| |||||||||||||| ||||| || ||||| || |
|
|
| T |
23634228 |
ataaatgggtgtgtgaaatgagggagcctaacaagaagactaagatttggctagggacttttccaacggccgagatggcagcacgagcacatgatgtcgc |
23634129 |
T |
|
| Q |
110 |
cgcgatagcattgaggggccgctatgcctgtctcaattttgcagactcggtgtggcgccttcctattccagcaacttccgcgataaaagatattcaaaag |
209 |
Q |
| |
|
|| | ||||| || || ||| | |||||||| |||||||| ||||| | | ||| ||||||||||| || ||| | | || || |||||| |||||| |
|
|
| T |
23634128 |
ggcattggcattaagaggtcgcaacgcctgtcttaattttgctgactctgcctcgcggcttcctattcctgccactacagagacaagagatatacaaaag |
23634029 |
T |
|
| Q |
210 |
gcagctacaaaagccgccgaagcttttagaccagacaatactttaatgaccggtgacattgacaccgttgtagctgttgtcgcaacacaggagctgaata |
309 |
Q |
| |
|
| ||| || |||| ||||| ||||| ||||||||||| ||||||| ||| | ||||| ||||| | |||||||| | ||| || |||||| | || |
|
|
| T |
23634028 |
acggctgcagaagctgccgaggctttcagaccagacaagactttaacgactgatgacaatgacaatgctgtagctgcagccgccgcagaggagcagctta |
23633929 |
T |
|
| Q |
310 |
tgtttcgt------gttgaagtcgaagaagaggaaatgttgaatatgccagagttgtggaggaatatggcactaatgtcccctacacatagctt |
397 |
Q |
| |
|
||||| || | |||| |||||||||||| |||||| || || |||| | |||||||||||| ||||||||||||||||||||||| |
|
|
| T |
23633928 |
tgtttagtatggaagaggaagaagaagaagaggaagagttgaacattcctgagtcattgaggaatatggctctaatgtcccctacacatagctt |
23633835 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 343 - 446
Target Start/End: Complemental strand, 23391174 - 23391074
Alignment:
| Q |
343 |
tgaatatgccagagttgtggaggaatatggcactaatgtcccctacacatagctttgggtatcatgatcagtatgaagatattcatatacaagactttca |
442 |
Q |
| |
|
|||| ||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||| ||| | |||||| |||||||| | ||||||||||| |
|
|
| T |
23391174 |
tgaacatgccagagttgttgaggaatatggcactaatgtctcctacacatagctctgggtataatg---aatatgaaaatattcatgttcaagactttca |
23391078 |
T |
|
| Q |
443 |
agat |
446 |
Q |
| |
|
|||| |
|
|
| T |
23391077 |
agat |
23391074 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 10 - 159
Target Start/End: Complemental strand, 23507048 - 23506899
Alignment:
| Q |
10 |
ataaatgggtttgtgaaatgagggagccgaacacaaagaataggatttggctaggaacttttccaacagccgagatggcagcccgagcccacgatgttgc |
109 |
Q |
| |
|
|||||||||| |||||||| || |||| |||| ||||| | ||||||||||||||||||||||||||||||||||||||| || ||||| |||||||| |
|
|
| T |
23507048 |
ataaatgggtgtgtgaaataagacagcctaacaaaaagaccaagatttggctaggaacttttccaacagccgagatggcagctcgggcccatgatgttgc |
23506949 |
T |
|
| Q |
110 |
cgcgatagcattgaggggccgctatgcctgtctcaattttgcagactcgg |
159 |
Q |
| |
|
|| | || |||| || || | ||||||||||| ||||||||||||| |
|
|
| T |
23506948 |
ggcactggcgttgaaaggtggcgacgcctgtctcaactttgcagactcgg |
23506899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 328 - 395
Target Start/End: Complemental strand, 23593082 - 23593015
Alignment:
| Q |
328 |
aagaagaggaaatgttgaatatgccagagttgtggaggaatatggcactaatgtcccctacacatagc |
395 |
Q |
| |
|
|||| |||||| ||||||| || ||||||| || |||||||||||| ||||||||||||||||||||| |
|
|
| T |
23593082 |
aagaggaggaagtgttgaacattccagagtcgttgaggaatatggctctaatgtcccctacacatagc |
23593015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 106
Target Start/End: Complemental strand, 23594259 - 23594164
Alignment:
| Q |
11 |
taaatgggtttgtgaaatgagggagccgaacacaaagaataggatttggctaggaacttttccaacagccgagatggcagcccgagcccacgatgt |
106 |
Q |
| |
|
||||||||| ||||||||||||||||| |||| | || || ||| ||||||||||||||||||| || ||||||| ||| |||||||| ||||| |
|
|
| T |
23594259 |
taaatgggtgtgtgaaatgagggagcctaacaagatgactaagatatggctaggaacttttccaatggctgagatggaagcacgagcccatgatgt |
23594164 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 343 - 477
Target Start/End: Complemental strand, 23582948 - 23582820
Alignment:
| Q |
343 |
tgaatatgccagagttgtggaggaatatggcactaatgtcccctacacatagctttgggtatcatgatcagtatgaagatattcatatacaagactttca |
442 |
Q |
| |
|
|||| |||| |||| ||||||| |||||||| |||||||| |||||||||||||| |||||| ||| ||||| || ||||| || |||||||||| |
|
|
| T |
23582948 |
tgaacatgcaagagatgtggagtaatatggcgctaatgtctcctacacatagcttggggtattatg---agtatcaatatattaat---gaagactttca |
23582855 |
T |
|
| Q |
443 |
agatgatgaggtatcactatggaacttttaaattt |
477 |
Q |
| |
|
|||||| | ||||||||||||| |||||||||| |
|
|
| T |
23582854 |
agatgaaaaagtatcactatggagtttttaaattt |
23582820 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 343 - 477
Target Start/End: Complemental strand, 23586831 - 23586703
Alignment:
| Q |
343 |
tgaatatgccagagttgtggaggaatatggcactaatgtcccctacacatagctttgggtatcatgatcagtatgaagatattcatatacaagactttca |
442 |
Q |
| |
|
|||| |||| |||| ||||||| |||||||| |||||||| |||||||||||||| |||||| ||| ||||| || ||||| || |||||||||| |
|
|
| T |
23586831 |
tgaacatgcaagagatgtggagtaatatggcgctaatgtctcctacacatagcttggggtattatg---agtatcaatatattaat---gaagactttca |
23586738 |
T |
|
| Q |
443 |
agatgatgaggtatcactatggaacttttaaattt |
477 |
Q |
| |
|
|||||| | ||||||||||||| |||||||||| |
|
|
| T |
23586737 |
agatgaaaaagtatcactatggagtttttaaattt |
23586703 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 710 - 771
Target Start/End: Complemental strand, 23246898 - 23246837
Alignment:
| Q |
710 |
taagttgaaggaggtaatacggtgtctcttgtcttattcttctcttctcttttgtaggactt |
771 |
Q |
| |
|
||||||| ||||||||| | |||| |||||||||| | ||||||||||||||||||||||| |
|
|
| T |
23246898 |
taagttgtaggaggtaaaatagtgtatcttgtcttaattttctcttctcttttgtaggactt |
23246837 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 327 - 397
Target Start/End: Complemental strand, 23506563 - 23506493
Alignment:
| Q |
327 |
gaagaagaggaaatgttgaatatgccagagttgtggaggaatatggcactaatgtcccctacacatagctt |
397 |
Q |
| |
|
|||||||||||| |||||| || || |||| | ||||||||||| ||||||||||||||||||||||| |
|
|
| T |
23506563 |
gaagaagaggaagagttgaacattcctgagtcattgaggaatatggttctaatgtcccctacacatagctt |
23506493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 605 - 657
Target Start/End: Complemental strand, 23247032 - 23246979
Alignment:
| Q |
605 |
agtgcatctcatcctttttattatatatgaaagaa-aatataattttggaattt |
657 |
Q |
| |
|
|||||||||||| ||||||||||||||||| || |||||||||||||||||| |
|
|
| T |
23247032 |
agtgcatctcatgacttttattatatatgaaaaaagaatataattttggaattt |
23246979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 109
Target Start/End: Complemental strand, 3996440 - 3996385
Alignment:
| Q |
54 |
atttggctaggaacttttccaacagccgagatggcagcccgagcccacgatgttgc |
109 |
Q |
| |
|
||||||||||| |||| ||||||| ||||||||||||| |||||||| || ||||| |
|
|
| T |
3996440 |
atttggctaggcacttatccaacacccgagatggcagctcgagcccatgacgttgc |
3996385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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