View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10298_low_10 (Length: 423)
Name: NF10298_low_10
Description: NF10298
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10298_low_10 |
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Alignment Details
Target: chr2 (Bit Score: 381; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 381; E-Value: 0
Query Start/End: Original strand, 1 - 408
Target Start/End: Original strand, 37736009 - 37736419
Alignment:
| Q |
1 |
tcgataaaattgtacatgaagacttcaacataaaatttggagtgacaaaagtatgataagaaattggttgtttggttgcttgaagcacggtgcatctggg |
100 |
Q |
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| T |
37736009 |
tcgataaaattgtacatgaagacttcagcatacaatttggagtgacaaaagtatgataagaaattggttgtttggttgcttgaagcacggtgcatctggg |
37736108 |
T |
|
| Q |
101 |
gtcaatggcacttgtttttaaccaagaaaggatagaaacgtgtcaaaaaattccatcactagtggttagacacattattgaacttgtggttctaaataat |
200 |
Q |
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| T |
37736109 |
gtcaatggcacttgtttttaaccaagaaaagatagaaacgtgtcaaaaaattccatcactagtggttagacacattattgaacttgtggttctaaataat |
37736208 |
T |
|
| Q |
201 |
agaaac---ttgttatttttctttcattcattcaaaggtatgaggaaattgcttcgatgaagagactttccttcctagaaactaaatcatgtgcctcact |
297 |
Q |
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|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
37736209 |
agaaacttgttgttatttttctttcattcattcaaaggtatgaggaaattgcttcgatgaagagactttccttcctagaaactaagtcatgtgcctcact |
37736308 |
T |
|
| Q |
298 |
acctatcaacaaccatgtgaattagtaagaaagtaacataaaccttccaatcttaattaccatgccatgtttatttcatgtgtaacgtttttgaaatcac |
397 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37736309 |
acctatcaacaaccatgtgaattagtaagaaagtaacataaaccttccaatcttaattaccatgccatgtttatttcatgtgtaacgtttttgaaatcac |
37736408 |
T |
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| Q |
398 |
accaaattttt |
408 |
Q |
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| T |
37736409 |
accaaattttt |
37736419 |
T |
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