View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10298_low_6 (Length: 486)
Name: NF10298_low_6
Description: NF10298
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10298_low_6 |
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Alignment Details
Target: chr7 (Bit Score: 400; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 400; E-Value: 0
Query Start/End: Original strand, 3 - 469
Target Start/End: Original strand, 30521054 - 30521527
Alignment:
| Q |
3 |
agtattccttgagctccttggtattttctcattttaaacataaatatcagtgtctatattccacatagacaaattttgcagttctattttcttatcatct |
102 |
Q |
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| T |
30521054 |
agtattcctttagctccttggtattttctcattttaaacataaatatcagtgtctatattccacatagacaaattttgcagttctattttcttatcatct |
30521153 |
T |
|
| Q |
103 |
aaaataataggctagcttcttcttatgtattcttcaaaagatttgtatatatcgtatacacttcaacgcagtannnnnnnnctgatgcagttgctggcat |
202 |
Q |
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| T |
30521154 |
aaaataataggctagcttcttcttatgtattcttcaaaagatttgtatatatggtatacacttcaacacagtattctttttctgatgcagttgctggcat |
30521253 |
T |
|
| Q |
203 |
atcatctcactgtactgaggggatttaatgtcgaccagcctcgtaatcttgccaagagtgttacgacgcaatagagtagtttgtttactaaggagagagg |
302 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |
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| T |
30521254 |
atcatctcactgtactgaggggatttaatgtcgaccagcctcgtaatcttgccaagagtgttacgacgcagtagagcagtttgtttactaaggagagagg |
30521353 |
T |
|
| Q |
303 |
gacaatttcgttgagttctctttctattattctgacaaa-------agataatatcaaggccctttattataactcttcccatacgctgagacatgattg |
395 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30521354 |
gacaatttcgttgagttctctttctattattctgacaaaagataatagataatatcaaggccctttattataactcttcccatacgctgagacatgattg |
30521453 |
T |
|
| Q |
396 |
tggttgatgaacacttcaattctttatcatagaaagggtgacatactagcatattgtaaattgatagatgtagg |
469 |
Q |
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||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
30521454 |
tggttgatgaacacttcaattctttatcatagacagggtgacatactagcatattgtaaattgatagatgtagg |
30521527 |
T |
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